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Cp4.1LG04g14740 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AATTATAGACCCGATCCAATCCGCGTATAGTTTTGACTTTTGAATTTTAGATTTATCACAGCAATCACATCGACACTTGAGAACGAGTCTAGAGATGTCGACACAAGCGAACGATCCACGGCAGCCGTCGGCGGCGAAGCCTTTTGTTTCTCCGGCTGTGAACCCGCAAGATCTTCCCGTCGATTATTCCGGTTTCATCGCCGTAGTTTTTGGCATCGCTGGCGTCATGTTCAGGGTATGCCTGTTTCTTTCCGAGCACTGATACGATAACTATGGGGATCTTACATTTTACTGATGCGATAGTCTTATTTTTCGTTAAAATTGAGCAGTACAAGCTTAGCTCTTGGCTAGCCATCATATTCTGCGCTCAATCGCTTGCTAATATGAGGAACATGGAGAACGATCTCAAGCAGATTTCCATGGCTATGATGTGA AATTATAGACCCGATCCAATCCGCGTATAGTTTTGACTTTTGAATTTTAGATTTATCACAGCAATCACATCGACACTTGAGAACGAGTCTAGAGATGTCGACACAAGCGAACGATCCACGGCAGCCGTCGGCGGCGAAGCCTTTTGTTTCTCCGGCTGTGAACCCGCAAGATCTTCCCGTCGATTATTCCGGTTTCATCGCCGTAGTTTTTGGCATCGCTGGCGTCATGTTCAGGTACAAGCTTAGCTCTTGGCTAGCCATCATATTCTGCGCTCAATCGCTTGCTAATATGAGGAACATGGAGAACGATCTCAAGCAGATTTCCATGGCTATGATGTGA ATGTCGACACAAGCGAACGATCCACGGCAGCCGTCGGCGGCGAAGCCTTTTGTTTCTCCGGCTGTGAACCCGCAAGATCTTCCCGTCGATTATTCCGGTTTCATCGCCGTAGTTTTTGGCATCGCTGGCGTCATGTTCAGGTACAAGCTTAGCTCTTGGCTAGCCATCATATTCTGCGCTCAATCGCTTGCTAATATGAGGAACATGGAGAACGATCTCAAGCAGATTTCCATGGCTATGATGTGA MSTQANDPRQPSAAKPFVSPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMM Homology
BLAST of Cp4.1LG04g14740 vs. ExPASy Swiss-Prot
Match: Q9SD88 (Protein Asterix OS=Arabidopsis thaliana OX=3702 GN=At5g07960 PE=3 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 1.8e-29 Identity = 62/80 (77.50%), Postives = 72/80 (90.00%), Query Frame = 0
BLAST of Cp4.1LG04g14740 vs. NCBI nr
Match: XP_022933634.1 (protein Asterix-like [Cucurbita moschata] >XP_023007397.1 protein Asterix-like [Cucurbita maxima] >XP_023529496.1 protein Asterix-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 157 bits (398), Expect = 4.07e-48 Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0
BLAST of Cp4.1LG04g14740 vs. NCBI nr
Match: KAG7021543.1 (Protein Asterix, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 157 bits (398), Expect = 9.13e-48 Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0
BLAST of Cp4.1LG04g14740 vs. NCBI nr
Match: KAG6587575.1 (Protein Asterix, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 157 bits (398), Expect = 1.70e-47 Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0
BLAST of Cp4.1LG04g14740 vs. NCBI nr
Match: XP_022921505.1 (protein Asterix-like [Cucurbita moschata] >XP_023515471.1 protein Asterix [Cucurbita pepo subsp. pepo] >KAG7023226.1 Protein Asterix, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 154 bits (389), Expect = 9.60e-47 Identity = 79/81 (97.53%), Postives = 80/81 (98.77%), Query Frame = 0
BLAST of Cp4.1LG04g14740 vs. NCBI nr
Match: KAA0057985.1 (protein Asterix [Cucumis melo var. makuwa]) HSP 1 Score: 153 bits (387), Expect = 1.06e-46 Identity = 78/81 (96.30%), Postives = 80/81 (98.77%), Query Frame = 0
BLAST of Cp4.1LG04g14740 vs. ExPASy TrEMBL
Match: A0A6J1KYK4 (protein Asterix-like OS=Cucurbita maxima OX=3661 GN=LOC111499903 PE=4 SV=1) HSP 1 Score: 157 bits (398), Expect = 1.97e-48 Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0
BLAST of Cp4.1LG04g14740 vs. ExPASy TrEMBL
Match: A0A6J1F0A5 (protein Asterix-like OS=Cucurbita moschata OX=3662 GN=LOC111440996 PE=4 SV=1) HSP 1 Score: 157 bits (398), Expect = 1.97e-48 Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0
BLAST of Cp4.1LG04g14740 vs. ExPASy TrEMBL
Match: A0A6J1E5Z1 (protein Asterix-like OS=Cucurbita moschata OX=3662 GN=LOC111429753 PE=4 SV=1) HSP 1 Score: 154 bits (389), Expect = 4.65e-47 Identity = 79/81 (97.53%), Postives = 80/81 (98.77%), Query Frame = 0
BLAST of Cp4.1LG04g14740 vs. ExPASy TrEMBL
Match: A0A5A7UWJ6 (Protein Asterix OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002890 PE=4 SV=1) HSP 1 Score: 153 bits (387), Expect = 5.13e-47 Identity = 78/81 (96.30%), Postives = 80/81 (98.77%), Query Frame = 0
BLAST of Cp4.1LG04g14740 vs. ExPASy TrEMBL
Match: A0A0A0LSF0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G013160 PE=4 SV=1) HSP 1 Score: 153 bits (387), Expect = 9.38e-47 Identity = 78/81 (96.30%), Postives = 80/81 (98.77%), Query Frame = 0
BLAST of Cp4.1LG04g14740 vs. TAIR 10
Match: AT5G07960.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0139 (InterPro:IPR005351); Has 193 Blast hits to 193 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). ) HSP 1 Score: 129.4 bits (324), Expect = 1.3e-30 Identity = 62/80 (77.50%), Postives = 72/80 (90.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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