Cp4.1LG04g14650 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG04g14650
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	pentatricopeptide repeat-containing protein PNM1, mitochondrial-like
Location	Cp4.1LG04: 11577452 .. 11579041 (-)
RNA-Seq Expression	Cp4.1LG04g14650
Synteny	Cp4.1LG04g14650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGCCATTACCGTATCTGCATCTCAGAAGGTTTTTTATTCGGTCTCTTTCTTCATCTTCGTATTTATCTGCCTCTTCGTCCTCAAGTTCTTTGAATGAAGCTTCGAAGAGCGTTGTTTTACGTCGAGATTTGACCTCTGTTTTCCACCATTTCCGTCGTCAAGGACCGGCATTGGGGTGTTCTTATCTATCCCAACTCTCACTTTCTCATTCGTTCTTTTCCGAGTCCGGTGAGAATGATGTGGATCAATCATCGCAGTCGCTTGCGGCCGAGCTTCTTAAAGACCCCGATTTGGATCCTCTTCCCATTACGAAGCGCCTTCAGCTTAGCTTTTCGCATGTTAAACCAAATCCGGAGTTAGTTCTCAATACGCTCAATCTCTCCTCGGAAGCTGGCCGAACTGTGCTAGGGTTTAACGAGTGGTTAATATCGAATCCTGATTTTCATCACACGGATGAGACTATATCGTATTTCGTTGATTATTTTGGTCGTAGAAAGGATTTCAATTCGATTCACGAAGTTCTTGCGAAGGGTTCAGGGATCAGTGGGGCTAAAACCCTGCGGTCGACTATTGATCGGTTCGCTCGTGCTGGACGACCCACAAAGTTGTTATCATTTTTCGAGACAATGGAGAAGAATTATGGATTTAAGAGGGATAAAGAGTCGATTAGGATTGTGGTGGAGAAGCTTTGTGAAAACGGCTACGCGAGCCATGCTGAGAAGATGGTCAAAGACTTAGCGCACGAATTTTTCCCAGACGAAGCAATTTGCGATGCTCTGATCAGAGGATGGTGCGTCGATGAGAAATTCGATGAAGCGAAAAGGCTGGCAGGTGAGATGTATAGGGGAGGGTTTGAGTTAGGGACAACGGCCTACAATGCTCTGCTTGACTGTGTTTGCAAGCTTTGTAGGAAAAAAGATCCATTTAAGCTTCAATCTGAAGCTGAGGAAATTCTGGTGGAAATGGATTGTCGTGGGGTTCCAAGAAACGTGGAAACTTTCAATGTACTGATTAATAACCTGTGCAAGATTAGGAAAACTACGGATGCACTAAATTTGTTTCATCGAATGGGGGAGTGGGGATGTCATCCTAACGCTGAAACGTTCCTTATTTTGATCAAAAGTTTGTATCAAGCGGCCAGGACGGGAGAAGGGGATGAAATGATTGACAGGATGAGGTCTGCGGGATATGCTGATGCACTTGATAAGAAGGCTTATTATGAGTTTCTGAAGATTTTGTGTGGGATCGAGAGGATTGATCATGCCCTGATTGTTTTTGCGAAGATGAAGAAGGATGGGTGTGAGCCTGGCATTAAGACATATGATCTATTGATGGGAAAACTCTGTGCCCATAATCGTCTGGACAGAGCAAATTCACTCTTTAATGAAGCTCAGAAACGGGGAGTTCCAGTCACTCCAAAAGCTTATCAGGTTGAGCCAAGGTATGCAAAGAAGCCAAAGGTAAAGAAGGTTGAGAAGAAGAGGGAGACGTTGCCAGAGAAAATGGCAAGGAAGAGGAGACGACTGAAGCAAATTCGATTGAGTTTTGTCAAGAAGCCAAAAAAAACAATGCGTAGAGCATTTTGA

mRNA sequence

ATGCCGCCATTACCGTATCTGCATCTCAGAAGGTTTTTTATTCGGTCTCTTTCTTCATCTTCGTATTTATCTGCCTCTTCGTCCTCAAGTTCTTTGAATGAAGCTTCGAAGAGCGTTGTTTTACGTCGAGATTTGACCTCTGTTTTCCACCATTTCCGTCGTCAAGGACCGGCATTGGGGTGTTCTTATCTATCCCAACTCTCACTTTCTCATTCGTTCTTTTCCGAGTCCGGTGAGAATGATGTGGATCAATCATCGCAGTCGCTTGCGGCCGAGCTTCTTAAAGACCCCGATTTGGATCCTCTTCCCATTACGAAGCGCCTTCAGCTTAGCTTTTCGCATGTTAAACCAAATCCGGAGTTAGTTCTCAATACGCTCAATCTCTCCTCGGAAGCTGGCCGAACTGTGCTAGGGTTTAACGAGTGGTTAATATCGAATCCTGATTTTCATCACACGGATGAGACTATATCGTATTTCGTTGATTATTTTGGTCGTAGAAAGGATTTCAATTCGATTCACGAAGTTCTTGCGAAGGGTTCAGGGATCAGTGGGGCTAAAACCCTGCGGTCGACTATTGATCGGTTCGCTCGTGCTGGACGACCCACAAAGTTGTTATCATTTTTCGAGACAATGGAGAAGAATTATGGATTTAAGAGGGATAAAGAGTCGATTAGGATTGTGGTGGAGAAGCTTTGTGAAAACGGCTACGCGAGCCATGCTGAGAAGATGGTCAAAGACTTAGCGCACGAATTTTTCCCAGACGAAGCAATTTGCGATGCTCTGATCAGAGGATGGTGCGTCGATGAGAAATTCGATGAAGCGAAAAGGCTGGCAGGTGAGATGTATAGGGGAGGGTTTGAGTTAGGGACAACGGCCTACAATGCTCTGCTTGACTGTGTTTGCAAGCTTTGTAGGAAAAAAGATCCATTTAAGCTTCAATCTGAAGCTGAGGAAATTCTGGTGGAAATGGATTGTCGTGGGGTTCCAAGAAACGTGGAAACTTTCAATGTACTGATTAATAACCTGTGCAAGATTAGGAAAACTACGGATGCACTAAATTTGTTTCATCGAATGGGGGAGTGGGGATGTCATCCTAACGCTGAAACGTTCCTTATTTTGATCAAAAGTTTGTATCAAGCGGCCAGGACGGGAGAAGGGGATGAAATGATTGACAGGATGAGGTCTGCGGGATATGCTGATGCACTTGATAAGAAGGCTTATTATGAGTTTCTGAAGATTTTGTGTGGGATCGAGAGGATTGATCATGCCCTGATTGTTTTTGCGAAGATGAAGAAGGATGGGTGTGAGCCTGGCATTAAGACATATGATCTATTGATGGGAAAACTCTGTGCCCATAATCGTCTGGACAGAGCAAATTCACTCTTTAATGAAGCTCAGAAACGGGGAGTTCCAGTCACTCCAAAAGCTTATCAGGTTGAGCCAAGGTATGCAAAGAAGCCAAAGGTAAAGAAGGTTGAGAAGAAGAGGGAGACGTTGCCAGAGAAAATGGCAAGGAAGAGGAGACGACTGAAGCAAATTCGATTGAGTTTTGTCAAGAAGCCAAAAAAAACAATGCGTAGAGCATTTTGA

Coding sequence (CDS)

ATGCCGCCATTACCGTATCTGCATCTCAGAAGGTTTTTTATTCGGTCTCTTTCTTCATCTTCGTATTTATCTGCCTCTTCGTCCTCAAGTTCTTTGAATGAAGCTTCGAAGAGCGTTGTTTTACGTCGAGATTTGACCTCTGTTTTCCACCATTTCCGTCGTCAAGGACCGGCATTGGGGTGTTCTTATCTATCCCAACTCTCACTTTCTCATTCGTTCTTTTCCGAGTCCGGTGAGAATGATGTGGATCAATCATCGCAGTCGCTTGCGGCCGAGCTTCTTAAAGACCCCGATTTGGATCCTCTTCCCATTACGAAGCGCCTTCAGCTTAGCTTTTCGCATGTTAAACCAAATCCGGAGTTAGTTCTCAATACGCTCAATCTCTCCTCGGAAGCTGGCCGAACTGTGCTAGGGTTTAACGAGTGGTTAATATCGAATCCTGATTTTCATCACACGGATGAGACTATATCGTATTTCGTTGATTATTTTGGTCGTAGAAAGGATTTCAATTCGATTCACGAAGTTCTTGCGAAGGGTTCAGGGATCAGTGGGGCTAAAACCCTGCGGTCGACTATTGATCGGTTCGCTCGTGCTGGACGACCCACAAAGTTGTTATCATTTTTCGAGACAATGGAGAAGAATTATGGATTTAAGAGGGATAAAGAGTCGATTAGGATTGTGGTGGAGAAGCTTTGTGAAAACGGCTACGCGAGCCATGCTGAGAAGATGGTCAAAGACTTAGCGCACGAATTTTTCCCAGACGAAGCAATTTGCGATGCTCTGATCAGAGGATGGTGCGTCGATGAGAAATTCGATGAAGCGAAAAGGCTGGCAGGTGAGATGTATAGGGGAGGGTTTGAGTTAGGGACAACGGCCTACAATGCTCTGCTTGACTGTGTTTGCAAGCTTTGTAGGAAAAAAGATCCATTTAAGCTTCAATCTGAAGCTGAGGAAATTCTGGTGGAAATGGATTGTCGTGGGGTTCCAAGAAACGTGGAAACTTTCAATGTACTGATTAATAACCTGTGCAAGATTAGGAAAACTACGGATGCACTAAATTTGTTTCATCGAATGGGGGAGTGGGGATGTCATCCTAACGCTGAAACGTTCCTTATTTTGATCAAAAGTTTGTATCAAGCGGCCAGGACGGGAGAAGGGGATGAAATGATTGACAGGATGAGGTCTGCGGGATATGCTGATGCACTTGATAAGAAGGCTTATTATGAGTTTCTGAAGATTTTGTGTGGGATCGAGAGGATTGATCATGCCCTGATTGTTTTTGCGAAGATGAAGAAGGATGGGTGTGAGCCTGGCATTAAGACATATGATCTATTGATGGGAAAACTCTGTGCCCATAATCGTCTGGACAGAGCAAATTCACTCTTTAATGAAGCTCAGAAACGGGGAGTTCCAGTCACTCCAAAAGCTTATCAGGTTGAGCCAAGGTATGCAAAGAAGCCAAAGGTAAAGAAGGTTGAGAAGAAGAGGGAGACGTTGCCAGAGAAAATGGCAAGGAAGAGGAGACGACTGAAGCAAATTCGATTGAGTTTTGTCAAGAAGCCAAAAAAAACAATGCGTAGAGCATTTTGA

Protein sequence

MPPLPYLHLRRFFIRSLSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRRQGPALGCSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLSFSHVKPNPELVLNTLNLSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGSGISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRIVVEKLCENGYASHAEKMVKDLAHEFFPDEAICDALIRGWCVDEKFDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGEWGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERIDHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVEPRYAKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKTMRRAF

Homology

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BLAST of Cp4.1LG04g14650 vs. ExPASy Swiss-Prot
Match: Q9FME4 (Pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PNM1 PE=1 SV=1)

HSP 1 Score: 620.9 bits (1600), Expect = 1.3e-176
Identity = 322/532 (60.53%), Postives = 397/532 (74.62%), Query Frame = 0


Query: 1   MPP-LPYLHLRRFFIRS-LSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRRQGPA 60
           MPP LP L LRR  +RS +SSSS  +  S    ++       L    +S+F  F  +   
Sbjct: 1   MPPSLPSLQLRRLLLRSFISSSSVNTLQSQPRIISSKPLFSPLPPSRSSIFSTFPSR--- 60

Query: 61  LGCSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLSFSHVKPN 120
                      S    +ES   D ++ + S + EL  +PD +   I++R  LSFSH+ PN
Sbjct: 61  ---------FFSSETNAESESLDSNEIALSFSKELTGNPDAESQTISQRFNLSFSHITPN 120

Query: 121 PELVLNTLNLSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAK 180
           P+L+L TLNLS EAGR  LGFNEWL SN +F HTDET+S+FVDYFGRRKDF  + E+++K
Sbjct: 121 PDLILQTLNLSPEAGRAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKGMLEIISK 180

Query: 181 GSGISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRIVVEKLCENGYAS 240
             GI+G KTL S IDR  RAGRP ++  FFE ME +YG KRDKES+ +VV+KLCE G+AS
Sbjct: 181 YKGIAGGKTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHAS 240

Query: 241 HAEKMVKDLAHEFFPDEAICDALIRGWCVDEKFDEAKRLAGEMYRGGFELGTTAYNALLD 300
            AEKMVK+ A+E FPDE ICD LI GWC+ EK DEA RLAGEM RGGFE+GT AYN +LD
Sbjct: 241 IAEKMVKNTANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLD 300

Query: 301 CVCKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRM 360
           CVCKLCRKKDPFKLQ E E++L+EM+ RGVPRN ETFNVLINNLCKIR+T +A+ LF RM
Sbjct: 301 CVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRM 360

Query: 361 GEWGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIE 420
           GEWGC P+AET+L+LI+SLYQAAR GEGDEMID+M+SAGY + L+KK YY FLKILCGIE
Sbjct: 361 GEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIE 420

Query: 421 RIDHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQ 480
           R++HA+ VF  MK +GC+PGIKTYDLLMGK+CA+N+L RAN L+ EA K+G+ V+PK Y+
Sbjct: 421 RLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGIAVSPKEYR 480

Query: 481 VEPRYAKKPKVKKVE---KKRETLPEKMARKRRRLKQIRLSFVKKPKKTMRR 528
           V+PR+ KK K K+V+   KKRETLPEK ARK++RLKQI +SFVKKP   MRR
Sbjct: 481 VDPRFMKK-KTKEVDSNVKKRETLPEKTARKKKRLKQINMSFVKKPHNKMRR 519

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BLAST of Cp4.1LG04g14650 vs. ExPASy Swiss-Prot
Match: Q9FLJ6 (Pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g61370 PE=2 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 2.6e-31
Identity = 93/417 (22.30%), Postives = 196/417 (47.00%), Query Frame = 0


Query: 115 VKPNPELVLNTLN--LSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSI 174
           V P+  LV   +    +  + R +L F  W   +      D+  +Y +     +KD  ++
Sbjct: 63  VSPSSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSSLHDKEFNYVLRVLAEKKDHTAM 122

Query: 175 HEVLA---KGSGISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRIVVE 234
             +L+   K +     +T     +   + G+    +  F+ ++K +   +D  ++  ++ 
Sbjct: 123 QILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDK-FSCPQDGFTVTAIIS 182

Query: 235 KLCENGYASHAEKMVKDLAHEFFPDE-AICDALIRGWCVDEKFDEAKRLAGEMYRGGFEL 294
            LC  G+   A  ++         +E ++  +L+ GW V     EA+R+  +M   G   
Sbjct: 183 ALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITP 242

Query: 295 GTTAYNALLDCVCKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKT 354
               +N+LL C+C+    ++P  L  EA  I++EM    +     ++N+L++ L + R+ 
Sbjct: 243 DLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRV 302

Query: 355 TDALNLFHRMGEWGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYY 414
            ++  +  +M   GC P+  ++  +++ LY   R G+G++++D M   G+    ++K YY
Sbjct: 303 RESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRP--ERKFYY 362

Query: 415 EFLKILCGIERIDHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKR 474
           + + +LCG+ER++ AL +F KMK+       + YDLL+ KLC     ++   L+ EA   
Sbjct: 363 DLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALSI 422

Query: 475 GVPVTPKAYQVEPRYAKKPKVKKVEKKRETLPEKMARKR--RRLKQIRLSFVKKPKK 524
            V ++     ++P   +  K  K++++   +  +    +   R+ + +     KPK+
Sbjct: 423 DVTLSCSISLLDPSVTEVFKPMKMKEEAAMVDRRALNLKIHARMNKTKPKLKLKPKR 476

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BLAST of Cp4.1LG04g14650 vs. ExPASy Swiss-Prot
Match: P0C8A0 (Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana OX=3702 GN=At3g49730 PE=2 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 4.8e-30
Identity = 92/368 (25.00%), Postives = 158/368 (42.93%), Query Frame = 0


Query: 108 LQLSFSHVKPNPELVLNTLNLSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRK 167
           L L+ S +   P L++  L+   +AG     F  W    P + H+ E     V    + +
Sbjct: 86  LALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMR 145

Query: 168 DFNS----IHEVLAKGSGISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKES 227
            F +    I E+      +   +     + RFA A    K +   + M K YG + D+  
Sbjct: 146 QFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPK-YGLEPDEYV 205

Query: 228 IRIVVEKLCENGYASHAEKMVKDLAHEFFPDEAICDALIRGWCVDEKFDEAKRLAGEMYR 287
              +++ LC+NG    A K+ +D+  +F P+     +L+ GWC + K  EAK +  +M  
Sbjct: 206 FGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKE 265

Query: 288 GGFELGTTAYNALLDCVCKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLC 347
            G E     +  LL       +  D + L +       +M  RG   NV  + VLI  LC
Sbjct: 266 AGLEPDIVVFTNLLSGYAHAGKMADAYDLMN-------DMRKRGFEPNVNCYTVLIQALC 325

Query: 348 KIRKTTD-ALNLFHRMGEWGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADAL 407
           +  K  D A+ +F  M  +GC  +  T+  LI    +     +G  ++D MR  G   + 
Sbjct: 326 RTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPS- 385

Query: 408 DKKAYYEFLKILCGIERIDHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLF 467
            +  Y + +      E+ +  L +  KMK+ GC P +  Y++++   C    +  A  L+
Sbjct: 386 -QVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLW 443

Query: 468 NEAQKRGV 471
           NE +  G+
Sbjct: 446 NEMEANGL 443

[Close]

BLAST of Cp4.1LG04g14650 vs. ExPASy Swiss-Prot
Match: Q9LUJ4 (Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22670 PE=2 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 2.4e-29
Identity = 94/377 (24.93%), Postives = 167/377 (44.30%), Query Frame = 0


Query: 109 QLSFSHVKPNPELVLNTLNLSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKD 168
           +LS   V     LVL  L   S       GF  W  S   + H+  T +  VD  G+ ++
Sbjct: 122 ELSKCDVVVTESLVLQVLRRFSNGWNQAYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRN 181

Query: 169 FNSIHEVLAKGSGISGAK-----TLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKES 228
           F+ + E++ + +    +K     T+   + R A++G+  K +  F  MEK+YG K D  +
Sbjct: 182 FDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIA 241

Query: 229 IRIVVEKLCENGYASHAEKMVKDLAHEFFPDEAICDALIRGWCVDEKFDEAKRLAGEMYR 288
           +  +++ L +     HA ++   L     PD    + LI G+C   KFD+A+ +   M  
Sbjct: 242 MNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKV 301

Query: 289 GGFELGTTAYNALLDCVCKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLC 348
             F      Y + ++  C    K+  F+      E+L EM   G   NV T+ +++++L 
Sbjct: 302 TEFTPDVVTYTSFVEAYC----KEGDFR---RVNEMLEEMRENGCNPNVVTYTIVMHSLG 361

Query: 349 KIRKTTDALNLFHRMGEWGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALD 408
           K ++  +AL ++ +M E GC P+A+ +  LI  L +  R  +  E+ + M + G     D
Sbjct: 362 KSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGV--RRD 421

Query: 409 KKAYYEFLKILCGIERIDHALIVFAKMKK---DGCEPGIKTYDLLMGKLCAHNRLDRANS 468
              Y   +       R + AL +  +M+    + C P ++TY  L+   C   ++     
Sbjct: 422 VLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGI 481

Query: 469 LFNEAQKRGVPVTPKAY 478
           L +   K  V +    Y
Sbjct: 482 LLHHMVKNDVSIDVSTY 489

[Close]

BLAST of Cp4.1LG04g14650 vs. ExPASy Swiss-Prot
Match: Q9FLL3 (Pentatricopeptide repeat-containing protein At5g41170, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g41170 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 1.4e-24
Identity = 88/316 (27.85%), Postives = 144/316 (45.57%), Query Frame = 0


Query: 192 IDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRIVVEKLCENGYASHAEKMVKDLA-HE 251
           ID   + G     LS F+ ME NYG + D      +V  LC +G    A+ +++ +   +
Sbjct: 184 IDSLCKNGHVNYALSLFDQME-NYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRK 243

Query: 252 FFPDEAICDALIRGWCVDEKFDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCRKKDPF 311
             PD    +ALI  +  + KF +A+ L  EM R         Y +L++  C         
Sbjct: 244 IKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCM-------E 303

Query: 312 KLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGEWGCHPNAETF 371
               EA ++   M+ +G   +V  +  LIN  CK +K  DA+ +F+ M + G   N  T+
Sbjct: 304 GCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITY 363

Query: 372 LILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERIDHALIVFAKM 431
             LI+   Q  +     E+   M S G    +  + Y   L  LC   ++  AL++F  M
Sbjct: 364 TTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNI--RTYNVLLHCLCYNGKVKKALMIFEDM 423

Query: 432 KK---DGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVEPR-YAKK 491
           +K   DG  P I TY++L+  LC + +L++A  +F + +KR + +    Y +  +   K 
Sbjct: 424 QKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKA 483

Query: 492 PKVKKVEKKRETLPEK 503
            KVK       +LP K
Sbjct: 484 GKVKNAVNLFCSLPSK 489

[Close]

BLAST of Cp4.1LG04g14650 vs. NCBI nr
Match: XP_023531133.1 (pentatricopeptide repeat-containing protein PNM1, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1038 bits (2685), Expect = 0.0
Identity = 529/529 (100.00%), Postives = 529/529 (100.00%), Query Frame = 0


Query: 1   MPPLPYLHLRRFFIRSLSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRRQGPALG 60
           MPPLPYLHLRRFFIRSLSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRRQGPALG
Sbjct: 1   MPPLPYLHLRRFFIRSLSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRRQGPALG 60

Query: 61  CSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLSFSHVKPNPE 120
           CSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLSFSHVKPNPE
Sbjct: 61  CSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLSFSHVKPNPE 120

Query: 121 LVLNTLNLSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGS 180
           LVLNTLNLSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGS
Sbjct: 121 LVLNTLNLSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGS 180

Query: 181 GISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRIVVEKLCENGYASHA 240
           GISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRIVVEKLCENGYASHA
Sbjct: 181 GISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRIVVEKLCENGYASHA 240

Query: 241 EKMVKDLAHEFFPDEAICDALIRGWCVDEKFDEAKRLAGEMYRGGFELGTTAYNALLDCV 300
           EKMVKDLAHEFFPDEAICDALIRGWCVDEKFDEAKRLAGEMYRGGFELGTTAYNALLDCV
Sbjct: 241 EKMVKDLAHEFFPDEAICDALIRGWCVDEKFDEAKRLAGEMYRGGFELGTTAYNALLDCV 300

Query: 301 CKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGE 360
           CKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGE
Sbjct: 301 CKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGE 360

Query: 361 WGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERI 420
           WGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERI
Sbjct: 361 WGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERI 420

Query: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVE 480
           DHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVE
Sbjct: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVE 480

Query: 481 PRYAKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKTMRRAF 529
           PRYAKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKTMRRAF
Sbjct: 481 PRYAKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKTMRRAF 529

[Close]

BLAST of Cp4.1LG04g14650 vs. NCBI nr
Match: XP_022933386.1 (pentatricopeptide repeat-containing protein PNM1, mitochondrial-like [Cucurbita moschata] >KAG6587594.1 Pentatricopeptide repeat-containing protein PNM1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021560.1 Pentatricopeptide repeat-containing protein PNM1, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1033 bits (2670), Expect = 0.0
Identity = 525/529 (99.24%), Postives = 528/529 (99.81%), Query Frame = 0


Query: 1   MPPLPYLHLRRFFIRSLSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRRQGPALG 60
           MPPLPYLHLRRFFIRSLSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRRQGPALG
Sbjct: 1   MPPLPYLHLRRFFIRSLSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRRQGPALG 60

Query: 61  CSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLSFSHVKPNPE 120
           CSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQL FSHVKPNPE
Sbjct: 61  CSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLIFSHVKPNPE 120

Query: 121 LVLNTLNLSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGS 180
           LVLNTLNLSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGS
Sbjct: 121 LVLNTLNLSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGS 180

Query: 181 GISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRIVVEKLCENGYASHA 240
           GISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIR+VVEKLCENGYASHA
Sbjct: 181 GISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRMVVEKLCENGYASHA 240

Query: 241 EKMVKDLAHEFFPDEAICDALIRGWCVDEKFDEAKRLAGEMYRGGFELGTTAYNALLDCV 300
           EKMVKDLAHEFFPDEAICDALI+GWCVDEKFDEAKRLAGEMYRGGFELGTTAYNALLDCV
Sbjct: 241 EKMVKDLAHEFFPDEAICDALIKGWCVDEKFDEAKRLAGEMYRGGFELGTTAYNALLDCV 300

Query: 301 CKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGE 360
           CKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGE
Sbjct: 301 CKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGE 360

Query: 361 WGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERI 420
           WGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERI
Sbjct: 361 WGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERI 420

Query: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVE 480
           DHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVE
Sbjct: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVE 480

Query: 481 PRYAKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKTMRRAF 529
           PRYAKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPK+TMRRAF
Sbjct: 481 PRYAKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKRTMRRAF 529

[Close]

BLAST of Cp4.1LG04g14650 vs. NCBI nr
Match: XP_022966044.1 (pentatricopeptide repeat-containing protein PNM1, mitochondrial-like [Cucurbita maxima] >XP_022966052.1 pentatricopeptide repeat-containing protein PNM1, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 1025 bits (2650), Expect = 0.0
Identity = 520/529 (98.30%), Postives = 525/529 (99.24%), Query Frame = 0


Query: 1   MPPLPYLHLRRFFIRSLSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRRQGPALG 60
           MPPLPYLHLRRFFIRSLSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRR+GPALG
Sbjct: 1   MPPLPYLHLRRFFIRSLSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRRRGPALG 60

Query: 61  CSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLSFSHVKPNPE 120
           CSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQL FSHVKPNPE
Sbjct: 61  CSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLCFSHVKPNPE 120

Query: 121 LVLNTLNLSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGS 180
           L+LNTLN SSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGS
Sbjct: 121 LILNTLNFSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGS 180

Query: 181 GISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRIVVEKLCENGYASHA 240
           GISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIR+VVEKLCENGYASHA
Sbjct: 181 GISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRMVVEKLCENGYASHA 240

Query: 241 EKMVKDLAHEFFPDEAICDALIRGWCVDEKFDEAKRLAGEMYRGGFELGTTAYNALLDCV 300
           EKMVKDLAHEFFPDEAICD LI+GWCV+EK DEAKRLAGEMYRGGFELGTTAYNALLDCV
Sbjct: 241 EKMVKDLAHEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCV 300

Query: 301 CKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGE 360
           CKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGE
Sbjct: 301 CKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGE 360

Query: 361 WGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERI 420
           WGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERI
Sbjct: 361 WGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERI 420

Query: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVE 480
           DHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVE
Sbjct: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVE 480

Query: 481 PRYAKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKTMRRAF 529
           PRYAKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKTMRRAF
Sbjct: 481 PRYAKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKTMRRAF 529

[Close]

BLAST of Cp4.1LG04g14650 vs. NCBI nr
Match: XP_038880042.1 (pentatricopeptide repeat-containing protein PNM1, mitochondrial [Benincasa hispida])

HSP 1 Score: 919 bits (2375), Expect = 0.0
Identity = 464/529 (87.71%), Postives = 494/529 (93.38%), Query Frame = 0


Query: 1   MPPLPYLHLRRFFIRSLSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRRQGPALG 60
           MPPLPYL LR  FIRSLSS S       S+SLN+ S++V+L R+LTS+FHHFR    AL 
Sbjct: 1   MPPLPYLQLRTLFIRSLSSPS-------STSLNDCSRNVLLHRNLTSLFHHFRHHEAALR 60

Query: 61  CSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLSFSHVKPNPE 120
            S    LSLSHSFFSESG+ND+DQ+SQSLA+ELLKDPDLDPLPIT+RLQLSFSHVKPNPE
Sbjct: 61  YSSPLYLSLSHSFFSESGDNDLDQTSQSLASELLKDPDLDPLPITQRLQLSFSHVKPNPE 120

Query: 121 LVLNTLNLSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGS 180
           LVLNTLNLSSEAGRTVLGFNEWL+SNPDFHHTDETISYF+DYFGRRKDFN++HEVLAKG 
Sbjct: 121 LVLNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFIDYFGRRKDFNAVHEVLAKGL 180

Query: 181 GISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRIVVEKLCENGYASHA 240
           GISGAKTLRS+IDRFARAGR TKL+SFFETMEKNYG KRDKES+R+VVEKLCENG+ASHA
Sbjct: 181 GISGAKTLRSSIDRFARAGRSTKLISFFETMEKNYGLKRDKESLRLVVEKLCENGFASHA 240

Query: 241 EKMVKDLAHEFFPDEAICDALIRGWCVDEKFDEAKRLAGEMYRGGFELGTTAYNALLDCV 300
           EKMVKDLA+EFFPDEAICD L++GWCVD K DEAKRLAGEMYRGGFELGTTAYNALLDCV
Sbjct: 241 EKMVKDLANEFFPDEAICDTLVKGWCVDGKLDEAKRLAGEMYRGGFELGTTAYNALLDCV 300

Query: 301 CKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGE 360
           CKLCRKKDPF+L SEAEEILVEMD RGVPRNVETFNVLINNLCKIRKT+DA+NLFHRMGE
Sbjct: 301 CKLCRKKDPFRLHSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTSDAVNLFHRMGE 360

Query: 361 WGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERI 420
           WGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGY DALDKKAYYEFLKILCGIERI
Sbjct: 361 WGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYGDALDKKAYYEFLKILCGIERI 420

Query: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVE 480
           DHAL+VFAKMKKDGCEPGIKTYDLLMGKLCAHNRLD+ANSLFNEAQKRGVPVTPKAYQV+
Sbjct: 421 DHALVVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDKANSLFNEAQKRGVPVTPKAYQVD 480

Query: 481 PRYAKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKTMRRAF 529
           PRY KKPKV KVEKKRETLPEKMARKRRRLKQIRLSFVKKPKK MRRAF
Sbjct: 481 PRYVKKPKVNKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKAMRRAF 522

[Close]

BLAST of Cp4.1LG04g14650 vs. NCBI nr
Match: XP_008453300.1 (PREDICTED: pentatricopeptide repeat-containing protein PNM1, mitochondrial [Cucumis melo] >KAA0058007.1 pentatricopeptide repeat-containing protein PNM1 [Cucumis melo var. makuwa] >TYJ98230.1 pentatricopeptide repeat-containing protein PNM1 [Cucumis melo var. makuwa])

HSP 1 Score: 901 bits (2328), Expect = 0.0
Identity = 453/529 (85.63%), Postives = 490/529 (92.63%), Query Frame = 0


Query: 1   MPPLPYLHLRRFFIRSLSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRRQGPALG 60
           MPPLPYL LR  F+RSLSSSS       ++SLN+++++V+L R+LTS+FHHFR  G AL 
Sbjct: 1   MPPLPYLQLRSLFLRSLSSSS-------TNSLNDSARTVLLHRNLTSLFHHFRHHGAALR 60

Query: 61  CSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLSFSHVKPNPE 120
            S    LSLSHSF SESG NDVDQ+SQSLA+ELLKDPD DPLPIT+RLQLSFSHVKPNPE
Sbjct: 61  FSSPLYLSLSHSFSSESGNNDVDQTSQSLASELLKDPDSDPLPITQRLQLSFSHVKPNPE 120

Query: 121 LVLNTLNLSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGS 180
           LV NTLNLSSEAGRTVLGFNEWL+SNPDFHHTDETISYFVDYFGRRKDFN++HEVLAKG 
Sbjct: 121 LVRNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNAVHEVLAKGL 180

Query: 181 GISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRIVVEKLCENGYASHA 240
           GI+G KTL S+I RFARAGRPTKL+SFFETMEKNYG KRDK+S+R+VVEKL ENG+ SHA
Sbjct: 181 GINGPKTLESSIHRFARAGRPTKLISFFETMEKNYGLKRDKKSLRMVVEKLSENGFGSHA 240

Query: 241 EKMVKDLAHEFFPDEAICDALIRGWCVDEKFDEAKRLAGEMYRGGFELGTTAYNALLDCV 300
           EKMVKDLA+EFFPDEAICD LI+GWCV+EK DEAKRLAGEMYRGGFELGTTAYNALLDCV
Sbjct: 241 EKMVKDLANEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCV 300

Query: 301 CKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGE 360
           CKLCRKKDPF+L SEAEEILVEMDCRGVPRNVETFNVLINNLCKIR+TTDA+NLFHRMGE
Sbjct: 301 CKLCRKKDPFRLHSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRRTTDAVNLFHRMGE 360

Query: 361 WGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERI 420
           WGCHPNAETFLILI+SLYQAARTGEGDEMIDRM+S GY DALDKKAYYEF+KILCGIERI
Sbjct: 361 WGCHPNAETFLILIRSLYQAARTGEGDEMIDRMKSVGYGDALDKKAYYEFMKILCGIERI 420

Query: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVE 480
           DHAL+VFAKMKKDGCEPGIKTYDLLMGKLCAHNRLD+ANSLFNEAQKRGVPVTPKAYQV+
Sbjct: 421 DHALVVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDKANSLFNEAQKRGVPVTPKAYQVD 480

Query: 481 PRYAKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKTMRRAF 529
           P+Y KKPKVKKV KKRETLPEKMARKRRRLKQIRLSFVKKPKK MRRAF
Sbjct: 481 PKYMKKPKVKKVAKKRETLPEKMARKRRRLKQIRLSFVKKPKKGMRRAF 522

[Close]

BLAST of Cp4.1LG04g14650 vs. ExPASy TrEMBL
Match: A0A6J1EYW9 (pentatricopeptide repeat-containing protein PNM1, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111440816 PE=4 SV=1)

HSP 1 Score: 1033 bits (2670), Expect = 0.0
Identity = 525/529 (99.24%), Postives = 528/529 (99.81%), Query Frame = 0


Query: 1   MPPLPYLHLRRFFIRSLSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRRQGPALG 60
           MPPLPYLHLRRFFIRSLSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRRQGPALG
Sbjct: 1   MPPLPYLHLRRFFIRSLSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRRQGPALG 60

Query: 61  CSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLSFSHVKPNPE 120
           CSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQL FSHVKPNPE
Sbjct: 61  CSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLIFSHVKPNPE 120

Query: 121 LVLNTLNLSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGS 180
           LVLNTLNLSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGS
Sbjct: 121 LVLNTLNLSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGS 180

Query: 181 GISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRIVVEKLCENGYASHA 240
           GISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIR+VVEKLCENGYASHA
Sbjct: 181 GISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRMVVEKLCENGYASHA 240

Query: 241 EKMVKDLAHEFFPDEAICDALIRGWCVDEKFDEAKRLAGEMYRGGFELGTTAYNALLDCV 300
           EKMVKDLAHEFFPDEAICDALI+GWCVDEKFDEAKRLAGEMYRGGFELGTTAYNALLDCV
Sbjct: 241 EKMVKDLAHEFFPDEAICDALIKGWCVDEKFDEAKRLAGEMYRGGFELGTTAYNALLDCV 300

Query: 301 CKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGE 360
           CKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGE
Sbjct: 301 CKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGE 360

Query: 361 WGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERI 420
           WGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERI
Sbjct: 361 WGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERI 420

Query: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVE 480
           DHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVE
Sbjct: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVE 480

Query: 481 PRYAKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKTMRRAF 529
           PRYAKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPK+TMRRAF
Sbjct: 481 PRYAKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKRTMRRAF 529

[Close]

BLAST of Cp4.1LG04g14650 vs. ExPASy TrEMBL
Match: A0A6J1HLZ2 (pentatricopeptide repeat-containing protein PNM1, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111465769 PE=4 SV=1)

HSP 1 Score: 1025 bits (2650), Expect = 0.0
Identity = 520/529 (98.30%), Postives = 525/529 (99.24%), Query Frame = 0


Query: 1   MPPLPYLHLRRFFIRSLSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRRQGPALG 60
           MPPLPYLHLRRFFIRSLSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRR+GPALG
Sbjct: 1   MPPLPYLHLRRFFIRSLSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRRRGPALG 60

Query: 61  CSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLSFSHVKPNPE 120
           CSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQL FSHVKPNPE
Sbjct: 61  CSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLCFSHVKPNPE 120

Query: 121 LVLNTLNLSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGS 180
           L+LNTLN SSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGS
Sbjct: 121 LILNTLNFSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGS 180

Query: 181 GISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRIVVEKLCENGYASHA 240
           GISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIR+VVEKLCENGYASHA
Sbjct: 181 GISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRMVVEKLCENGYASHA 240

Query: 241 EKMVKDLAHEFFPDEAICDALIRGWCVDEKFDEAKRLAGEMYRGGFELGTTAYNALLDCV 300
           EKMVKDLAHEFFPDEAICD LI+GWCV+EK DEAKRLAGEMYRGGFELGTTAYNALLDCV
Sbjct: 241 EKMVKDLAHEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCV 300

Query: 301 CKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGE 360
           CKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGE
Sbjct: 301 CKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGE 360

Query: 361 WGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERI 420
           WGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERI
Sbjct: 361 WGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERI 420

Query: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVE 480
           DHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVE
Sbjct: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVE 480

Query: 481 PRYAKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKTMRRAF 529
           PRYAKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKTMRRAF
Sbjct: 481 PRYAKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKTMRRAF 529

[Close]

BLAST of Cp4.1LG04g14650 vs. ExPASy TrEMBL
Match: A0A5A7UTF6 (Pentatricopeptide repeat-containing protein PNM1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold346G00020 PE=4 SV=1)

HSP 1 Score: 901 bits (2328), Expect = 0.0
Identity = 453/529 (85.63%), Postives = 490/529 (92.63%), Query Frame = 0


Query: 1   MPPLPYLHLRRFFIRSLSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRRQGPALG 60
           MPPLPYL LR  F+RSLSSSS       ++SLN+++++V+L R+LTS+FHHFR  G AL 
Sbjct: 1   MPPLPYLQLRSLFLRSLSSSS-------TNSLNDSARTVLLHRNLTSLFHHFRHHGAALR 60

Query: 61  CSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLSFSHVKPNPE 120
            S    LSLSHSF SESG NDVDQ+SQSLA+ELLKDPD DPLPIT+RLQLSFSHVKPNPE
Sbjct: 61  FSSPLYLSLSHSFSSESGNNDVDQTSQSLASELLKDPDSDPLPITQRLQLSFSHVKPNPE 120

Query: 121 LVLNTLNLSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGS 180
           LV NTLNLSSEAGRTVLGFNEWL+SNPDFHHTDETISYFVDYFGRRKDFN++HEVLAKG 
Sbjct: 121 LVRNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNAVHEVLAKGL 180

Query: 181 GISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRIVVEKLCENGYASHA 240
           GI+G KTL S+I RFARAGRPTKL+SFFETMEKNYG KRDK+S+R+VVEKL ENG+ SHA
Sbjct: 181 GINGPKTLESSIHRFARAGRPTKLISFFETMEKNYGLKRDKKSLRMVVEKLSENGFGSHA 240

Query: 241 EKMVKDLAHEFFPDEAICDALIRGWCVDEKFDEAKRLAGEMYRGGFELGTTAYNALLDCV 300
           EKMVKDLA+EFFPDEAICD LI+GWCV+EK DEAKRLAGEMYRGGFELGTTAYNALLDCV
Sbjct: 241 EKMVKDLANEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCV 300

Query: 301 CKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGE 360
           CKLCRKKDPF+L SEAEEILVEMDCRGVPRNVETFNVLINNLCKIR+TTDA+NLFHRMGE
Sbjct: 301 CKLCRKKDPFRLHSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRRTTDAVNLFHRMGE 360

Query: 361 WGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERI 420
           WGCHPNAETFLILI+SLYQAARTGEGDEMIDRM+S GY DALDKKAYYEF+KILCGIERI
Sbjct: 361 WGCHPNAETFLILIRSLYQAARTGEGDEMIDRMKSVGYGDALDKKAYYEFMKILCGIERI 420

Query: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVE 480
           DHAL+VFAKMKKDGCEPGIKTYDLLMGKLCAHNRLD+ANSLFNEAQKRGVPVTPKAYQV+
Sbjct: 421 DHALVVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDKANSLFNEAQKRGVPVTPKAYQVD 480

Query: 481 PRYAKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKTMRRAF 529
           P+Y KKPKVKKV KKRETLPEKMARKRRRLKQIRLSFVKKPKK MRRAF
Sbjct: 481 PKYMKKPKVKKVAKKRETLPEKMARKRRRLKQIRLSFVKKPKKGMRRAF 522

[Close]

BLAST of Cp4.1LG04g14650 vs. ExPASy TrEMBL
Match: A0A1S3BVC3 (pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494058 PE=4 SV=1)

HSP 1 Score: 901 bits (2328), Expect = 0.0
Identity = 453/529 (85.63%), Postives = 490/529 (92.63%), Query Frame = 0


Query: 1   MPPLPYLHLRRFFIRSLSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRRQGPALG 60
           MPPLPYL LR  F+RSLSSSS       ++SLN+++++V+L R+LTS+FHHFR  G AL 
Sbjct: 1   MPPLPYLQLRSLFLRSLSSSS-------TNSLNDSARTVLLHRNLTSLFHHFRHHGAALR 60

Query: 61  CSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLSFSHVKPNPE 120
            S    LSLSHSF SESG NDVDQ+SQSLA+ELLKDPD DPLPIT+RLQLSFSHVKPNPE
Sbjct: 61  FSSPLYLSLSHSFSSESGNNDVDQTSQSLASELLKDPDSDPLPITQRLQLSFSHVKPNPE 120

Query: 121 LVLNTLNLSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGS 180
           LV NTLNLSSEAGRTVLGFNEWL+SNPDFHHTDETISYFVDYFGRRKDFN++HEVLAKG 
Sbjct: 121 LVRNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNAVHEVLAKGL 180

Query: 181 GISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRIVVEKLCENGYASHA 240
           GI+G KTL S+I RFARAGRPTKL+SFFETMEKNYG KRDK+S+R+VVEKL ENG+ SHA
Sbjct: 181 GINGPKTLESSIHRFARAGRPTKLISFFETMEKNYGLKRDKKSLRMVVEKLSENGFGSHA 240

Query: 241 EKMVKDLAHEFFPDEAICDALIRGWCVDEKFDEAKRLAGEMYRGGFELGTTAYNALLDCV 300
           EKMVKDLA+EFFPDEAICD LI+GWCV+EK DEAKRLAGEMYRGGFELGTTAYNALLDCV
Sbjct: 241 EKMVKDLANEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCV 300

Query: 301 CKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGE 360
           CKLCRKKDPF+L SEAEEILVEMDCRGVPRNVETFNVLINNLCKIR+TTDA+NLFHRMGE
Sbjct: 301 CKLCRKKDPFRLHSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRRTTDAVNLFHRMGE 360

Query: 361 WGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERI 420
           WGCHPNAETFLILI+SLYQAARTGEGDEMIDRM+S GY DALDKKAYYEF+KILCGIERI
Sbjct: 361 WGCHPNAETFLILIRSLYQAARTGEGDEMIDRMKSVGYGDALDKKAYYEFMKILCGIERI 420

Query: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVE 480
           DHAL+VFAKMKKDGCEPGIKTYDLLMGKLCAHNRLD+ANSLFNEAQKRGVPVTPKAYQV+
Sbjct: 421 DHALVVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDKANSLFNEAQKRGVPVTPKAYQVD 480

Query: 481 PRYAKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKTMRRAF 529
           P+Y KKPKVKKV KKRETLPEKMARKRRRLKQIRLSFVKKPKK MRRAF
Sbjct: 481 PKYMKKPKVKKVAKKRETLPEKMARKRRRLKQIRLSFVKKPKKGMRRAF 522

[Close]

BLAST of Cp4.1LG04g14650 vs. ExPASy TrEMBL
Match: A0A6J1C4U6 (pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111007404 PE=4 SV=1)

HSP 1 Score: 887 bits (2291), Expect = 0.0
Identity = 454/529 (85.82%), Postives = 485/529 (91.68%), Query Frame = 0


Query: 1   MPPLPYLHLRRFFIRSLSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRRQGPALG 60
           M PL YL+LRR FIRSLSSSS LSA SSSSS NE ++SV+L R+LTS FHHF   G AL 
Sbjct: 1   MTPLLYLYLRRHFIRSLSSSSSLSACSSSSSFNERTRSVLLHRNLTSPFHHFGHNGAALR 60

Query: 61  CSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLSFSHVKPNPE 120
            + LSQLS+SHSF SESG +D  Q+SQSLA+ELLKD D DPLPITKRL+LSFSHVKPNPE
Sbjct: 61  FNSLSQLSISHSFSSESGHSD--QTSQSLASELLKDADSDPLPITKRLELSFSHVKPNPE 120

Query: 121 LVLNTLNLSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGS 180
           LVLNTLNLSSEAGRTVLGFNEWL+SNPDFHHTD+TISYFVDYFGRRKDFN+IHEVL KG 
Sbjct: 121 LVLNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDDTISYFVDYFGRRKDFNAIHEVLVKGY 180

Query: 181 GISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRIVVEKLCENGYASHA 240
           G+SGAKTLRS+IDR  RAGRPTK +SFFE MEK+YGFKRDKES+R+VVEKLCENG ASHA
Sbjct: 181 GVSGAKTLRSSIDRLVRAGRPTKAVSFFEKMEKDYGFKRDKESLRMVVEKLCENGCASHA 240

Query: 241 EKMVKDLAHEFFPDEAICDALIRGWCVDEKFDEAKRLAGEMYRGGFELGTTAYNALLDCV 300
           EKMVKDLA+EFFPDEA+CD LI+GWCVD K DEAKRLAGEMYRGGFELGT AYNALLDCV
Sbjct: 241 EKMVKDLANEFFPDEAMCDVLIKGWCVDGKLDEAKRLAGEMYRGGFELGTMAYNALLDCV 300

Query: 301 CKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGE 360
           CK+CRKKDPF+LQSEAEEILVEMD RGVPRNVETFNVLINNLCKIRKT+DA+NLF RMGE
Sbjct: 301 CKICRKKDPFRLQSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTSDAVNLFRRMGE 360

Query: 361 WGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERI 420
           WGC PNAETFLILI+SLYQAART EGDEMIDRMRSAGY DALDKKAYYEFLKILCGIERI
Sbjct: 361 WGCLPNAETFLILIRSLYQAARTAEGDEMIDRMRSAGYGDALDKKAYYEFLKILCGIERI 420

Query: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVE 480
           DHALIVFAKMKKDGCEPGIKTYDLLMGK CAHNRLD+ANSLFNEAQ+ GVPV PKAYQV+
Sbjct: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKFCAHNRLDKANSLFNEAQRTGVPVAPKAYQVD 480

Query: 481 PRYAKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKTMRRAF 529
           PRY KKPKVKK EKKRETLPEKMARKRRRLKQIRLSFVKKPKK MRRAF
Sbjct: 481 PRYVKKPKVKKAEKKRETLPEKMARKRRRLKQIRLSFVKKPKKAMRRAF 527

[Close]

BLAST of Cp4.1LG04g14650 vs. TAIR 10
Match: AT5G60960.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 620.9 bits (1600), Expect = 9.3e-178
Identity = 322/532 (60.53%), Postives = 397/532 (74.62%), Query Frame = 0


Query: 1   MPP-LPYLHLRRFFIRS-LSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRRQGPA 60
           MPP LP L LRR  +RS +SSSS  +  S    ++       L    +S+F  F  +   
Sbjct: 1   MPPSLPSLQLRRLLLRSFISSSSVNTLQSQPRIISSKPLFSPLPPSRSSIFSTFPSR--- 60

Query: 61  LGCSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLSFSHVKPN 120
                      S    +ES   D ++ + S + EL  +PD +   I++R  LSFSH+ PN
Sbjct: 61  ---------FFSSETNAESESLDSNEIALSFSKELTGNPDAESQTISQRFNLSFSHITPN 120

Query: 121 PELVLNTLNLSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAK 180
           P+L+L TLNLS EAGR  LGFNEWL SN +F HTDET+S+FVDYFGRRKDF  + E+++K
Sbjct: 121 PDLILQTLNLSPEAGRAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKGMLEIISK 180

Query: 181 GSGISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRIVVEKLCENGYAS 240
             GI+G KTL S IDR  RAGRP ++  FFE ME +YG KRDKES+ +VV+KLCE G+AS
Sbjct: 181 YKGIAGGKTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHAS 240

Query: 241 HAEKMVKDLAHEFFPDEAICDALIRGWCVDEKFDEAKRLAGEMYRGGFELGTTAYNALLD 300
            AEKMVK+ A+E FPDE ICD LI GWC+ EK DEA RLAGEM RGGFE+GT AYN +LD
Sbjct: 241 IAEKMVKNTANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLD 300

Query: 301 CVCKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRM 360
           CVCKLCRKKDPFKLQ E E++L+EM+ RGVPRN ETFNVLINNLCKIR+T +A+ LF RM
Sbjct: 301 CVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRM 360

Query: 361 GEWGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIE 420
           GEWGC P+AET+L+LI+SLYQAAR GEGDEMID+M+SAGY + L+KK YY FLKILCGIE
Sbjct: 361 GEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIE 420

Query: 421 RIDHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQ 480
           R++HA+ VF  MK +GC+PGIKTYDLLMGK+CA+N+L RAN L+ EA K+G+ V+PK Y+
Sbjct: 421 RLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGIAVSPKEYR 480

Query: 481 VEPRYAKKPKVKKVE---KKRETLPEKMARKRRRLKQIRLSFVKKPKKTMRR 528
           V+PR+ KK K K+V+   KKRETLPEK ARK++RLKQI +SFVKKP   MRR
Sbjct: 481 VDPRFMKK-KTKEVDSNVKKRETLPEKTARKKKRLKQINMSFVKKPHNKMRR 519

[Close]

BLAST of Cp4.1LG04g14650 vs. TAIR 10
Match: AT5G61370.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 138.3 bits (347), Expect = 1.8e-32
Identity = 93/417 (22.30%), Postives = 196/417 (47.00%), Query Frame = 0


Query: 115 VKPNPELVLNTLN--LSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSI 174
           V P+  LV   +    +  + R +L F  W   +      D+  +Y +     +KD  ++
Sbjct: 63  VSPSSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSSLHDKEFNYVLRVLAEKKDHTAM 122

Query: 175 HEVLA---KGSGISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRIVVE 234
             +L+   K +     +T     +   + G+    +  F+ ++K +   +D  ++  ++ 
Sbjct: 123 QILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDK-FSCPQDGFTVTAIIS 182

Query: 235 KLCENGYASHAEKMVKDLAHEFFPDE-AICDALIRGWCVDEKFDEAKRLAGEMYRGGFEL 294
            LC  G+   A  ++         +E ++  +L+ GW V     EA+R+  +M   G   
Sbjct: 183 ALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITP 242

Query: 295 GTTAYNALLDCVCKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKT 354
               +N+LL C+C+    ++P  L  EA  I++EM    +     ++N+L++ L + R+ 
Sbjct: 243 DLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRV 302

Query: 355 TDALNLFHRMGEWGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYY 414
            ++  +  +M   GC P+  ++  +++ LY   R G+G++++D M   G+    ++K YY
Sbjct: 303 RESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRP--ERKFYY 362

Query: 415 EFLKILCGIERIDHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKR 474
           + + +LCG+ER++ AL +F KMK+       + YDLL+ KLC     ++   L+ EA   
Sbjct: 363 DLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALSI 422

Query: 475 GVPVTPKAYQVEPRYAKKPKVKKVEKKRETLPEKMARKR--RRLKQIRLSFVKKPKK 524
            V ++     ++P   +  K  K++++   +  +    +   R+ + +     KPK+
Sbjct: 423 DVTLSCSISLLDPSVTEVFKPMKMKEEAAMVDRRALNLKIHARMNKTKPKLKLKPKR 476

[Close]

BLAST of Cp4.1LG04g14650 vs. TAIR 10
Match: AT3G22670.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 131.7 bits (330), Expect = 1.7e-30
Identity = 94/377 (24.93%), Postives = 167/377 (44.30%), Query Frame = 0


Query: 109 QLSFSHVKPNPELVLNTLNLSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKD 168
           +LS   V     LVL  L   S       GF  W  S   + H+  T +  VD  G+ ++
Sbjct: 122 ELSKCDVVVTESLVLQVLRRFSNGWNQAYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRN 181

Query: 169 FNSIHEVLAKGSGISGAK-----TLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKES 228
           F+ + E++ + +    +K     T+   + R A++G+  K +  F  MEK+YG K D  +
Sbjct: 182 FDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIA 241

Query: 229 IRIVVEKLCENGYASHAEKMVKDLAHEFFPDEAICDALIRGWCVDEKFDEAKRLAGEMYR 288
           +  +++ L +     HA ++   L     PD    + LI G+C   KFD+A+ +   M  
Sbjct: 242 MNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKV 301

Query: 289 GGFELGTTAYNALLDCVCKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLC 348
             F      Y + ++  C    K+  F+      E+L EM   G   NV T+ +++++L 
Sbjct: 302 TEFTPDVVTYTSFVEAYC----KEGDFR---RVNEMLEEMRENGCNPNVVTYTIVMHSLG 361

Query: 349 KIRKTTDALNLFHRMGEWGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALD 408
           K ++  +AL ++ +M E GC P+A+ +  LI  L +  R  +  E+ + M + G     D
Sbjct: 362 KSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGV--RRD 421

Query: 409 KKAYYEFLKILCGIERIDHALIVFAKMKK---DGCEPGIKTYDLLMGKLCAHNRLDRANS 468
              Y   +       R + AL +  +M+    + C P ++TY  L+   C   ++     
Sbjct: 422 VLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGI 481

Query: 469 LFNEAQKRGVPVTPKAY 478
           L +   K  V +    Y
Sbjct: 482 LLHHMVKNDVSIDVSTY 489

[Close]

BLAST of Cp4.1LG04g14650 vs. TAIR 10
Match: AT3G22470.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 118.2 bits (295), Expect = 1.9e-26
Identity = 82/289 (28.37%), Postives = 128/289 (44.29%), Query Frame = 0


Query: 192 IDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRIVVEKLCENGYASHAEKMVKD-LAHE 251
           ID   + G     LS F  ME   G K D  +   ++  LC +G      KM+++ +   
Sbjct: 252 IDSLCKDGSFDDALSLFNEMEMK-GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 311

Query: 252 FFPDEAICDALIRGWCVDEKFDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCRKKDPF 311
             PD     ALI  +  + K  EAK L  EM   G    T  YN+L+D  CK        
Sbjct: 312 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCK-------E 371

Query: 312 KLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGEWGCHPNAETF 371
               EA ++   M  +G   ++ T+++LIN+ CK ++  D + LF  +   G  PN  T+
Sbjct: 372 NCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITY 431

Query: 372 LILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERIDHALIVFAKM 431
             L+    Q+ +     E+   M S G   ++    Y   L  LC    ++ AL +F KM
Sbjct: 432 NTLVLGFCQSGKLNAAKELFQEMVSRGVPPSV--VTYGILLDGLCDNGELNKALEIFEKM 491

Query: 432 KKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQV 480
           +K     GI  Y++++  +C  +++D A SLF     +GV      Y V
Sbjct: 492 QKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNV 530

[Close]

BLAST of Cp4.1LG04g14650 vs. TAIR 10
Match: AT5G41170.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 115.9 bits (289), Expect = 9.7e-26
Identity = 88/316 (27.85%), Postives = 144/316 (45.57%), Query Frame = 0


Query: 192 IDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRIVVEKLCENGYASHAEKMVKDLA-HE 251
           ID   + G     LS F+ ME NYG + D      +V  LC +G    A+ +++ +   +
Sbjct: 184 IDSLCKNGHVNYALSLFDQME-NYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRK 243

Query: 252 FFPDEAICDALIRGWCVDEKFDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCRKKDPF 311
             PD    +ALI  +  + KF +A+ L  EM R         Y +L++  C         
Sbjct: 244 IKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCM-------E 303

Query: 312 KLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGEWGCHPNAETF 371
               EA ++   M+ +G   +V  +  LIN  CK +K  DA+ +F+ M + G   N  T+
Sbjct: 304 GCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITY 363

Query: 372 LILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERIDHALIVFAKM 431
             LI+   Q  +     E+   M S G    +  + Y   L  LC   ++  AL++F  M
Sbjct: 364 TTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNI--RTYNVLLHCLCYNGKVKKALMIFEDM 423

Query: 432 KK---DGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVEPR-YAKK 491
           +K   DG  P I TY++L+  LC + +L++A  +F + +KR + +    Y +  +   K 
Sbjct: 424 QKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKA 483

Query: 492 PKVKKVEKKRETLPEK 503
            KVK       +LP K
Sbjct: 484 GKVKNAVNLFCSLPSK 489

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g14650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FME4	1.3e-176	60.53	Pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Arabidopsis t...	[more]
Q9FLJ6	2.6e-31	22.30	Pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Arabidop...	[more]
P0C8A0	4.8e-30	25.00	Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana OX...	[more]
Q9LUJ4	2.4e-29	24.93	Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidop...	[more]
Q9FLL3	1.4e-24	27.85	Pentatricopeptide repeat-containing protein At5g41170, mitochondrial OS=Arabidop...	[more]

BLAST of Cp4.1LG04g14650 vs. NCBI nr


Match Name	Identity	Description
XP_023531133.1	100.00	pentatricopeptide repeat-containing protein PNM1, mitochondrial-like [Cucurbita ...	[more]
XP_022933386.1	99.24	pentatricopeptide repeat-containing protein PNM1, mitochondrial-like [Cucurbita ...	[more]
XP_022966044.1	98.30	pentatricopeptide repeat-containing protein PNM1, mitochondrial-like [Cucurbita ...	[more]
XP_038880042.1	87.71	pentatricopeptide repeat-containing protein PNM1, mitochondrial [Benincasa hispi...	[more]
XP_008453300.1	85.63	PREDICTED: pentatricopeptide repeat-containing protein PNM1, mitochondrial [Cucu...	[more]

BLAST of Cp4.1LG04g14650 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1EYW9	99.24	pentatricopeptide repeat-containing protein PNM1, mitochondrial-like OS=Cucurbit...	[more]
A0A6J1HLZ2	98.30	pentatricopeptide repeat-containing protein PNM1, mitochondrial-like OS=Cucurbit...	[more]
A0A5A7UTF6	85.63	Pentatricopeptide repeat-containing protein PNM1 OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3BVC3	85.63	pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Cucumis melo ...	[more]
A0A6J1C4U6	85.82	pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Momordica cha...	[more]

BLAST of Cp4.1LG04g14650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60960.1	9.3e-178	60.53	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G61370.1	1.8e-32	22.30	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G22670.1	1.7e-30	24.93	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G22470.1	1.9e-26	28.37	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G41170.1	9.7e-26	27.85	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 141..282 e-value: 9.0E-12 score: 47.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 283..401 e-value: 7.7E-21 score: 76.8 coord: 402..526 e-value: 5.1E-12 score: 47.9
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 441..472 e-value: 0.0029 score: 15.7 coord: 334..367 e-value: 3.1E-8 score: 31.3
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 260..285 e-value: 0.81 score: 10.1
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 421..447 e-value: 2.8E-4 score: 20.9
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 331..377 e-value: 1.2E-12 score: 47.8
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 331..365 score: 11.925952
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 403..437 score: 9.448698
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 254..288 score: 9.174665
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 438..472 score: 9.240434
None	No IPR available	PANTHER	PTHR47932:SF13	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PNM1, MITOCHONDRIAL	coord: 46..528
None	No IPR available	PANTHER	PTHR47932	ATPASE EXPRESSION PROTEIN 3	coord: 46..528

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g14650.1	Cp4.1LG04g14650.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding