Cp4.1LG04g14630 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG04g14630
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptionsuppressor protein SRP40 isoform X1
LocationCp4.1LG04: 11636350 .. 11639076 (-)
RNA-Seq ExpressionCp4.1LG04g14630
SyntenyCp4.1LG04g14630
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CGTTGGTAGAAAGAGAAAGAGAAGGCTGAAACAATGCGACGCCTCATAACTTCCTTCCCACTCCGTTTTCCATTTTCAATCTCTACTCTCTCTCTCTCTCCTAAATTCTCTCTCTTCCTCCCTCCCATCTCTGTTTCACCATTCTCTCTCTTCCTCGTTCGATTCTATCGGAATCTTTTCTGAATTTGGGTTTCTCTTCTTTTGATCATTCGATAATCCATCCCTTTGCGACATTCCCAATCCGGGACTGTCGGTACCCGGCCGTCGGAGGCCTCTTCTCCTCTTCTCTCCGGCCGAAAGTCTCTATGAGCTTTTCGTCTGTTACTACTTGGGATTGGGAAGTTTTCGACGTAAGTTATCGTTTATCCTGCAACTCTTGACTTTATATTGGATTCTCCTGTTATTCTTTTGATGCCGTCGTGTTTTGTGTTACGATTTGTTGTTATTTGTTCGGTTTCATTTTTTTGCGGATGTAGATATTTGATTTGAAATCGCATGCGAAGTGAACAAAAAGGAGCGATCGAGAAATCACGAATACTTGGGATCTTGAGAGATTTGATGTTATGAGGGGTTAGGCGATGGAATAGTGAACGGGAGATTGTTGAAATGAAGCGCATGGATTATATTTTGGAATGCGATCTCTGTATTTCAGAGTTTCAAGAGGTCGTGGAATGGGGCAAAAGCCGCGCTGTTCTTTTCGAGGTTGCGAGATATTGTTTAGTTCGCGGCGGCGATGAATAATTCACAAGTACTGGTTGAGTTTCAGGAATTGAAATCTAACGATTTCGGGTTATCGCTTAACTTATGTTCGTCATGGATAGAACATAGGCTGGGGATTAAATCCGGATGGCCGAAGAAACTTGTAGGCGCCCCATCTTCCATTTCTCTGATAAACACAATGCGATTGATTTCTCGCTGACAGAAGAGAGCTAGCGAAGTAATCCATTTCTGATTCAATACTCTCTTACGGCGTGATAGAACCTAGATCCAGATATAATCGAATCATAAAGGGTTTGGATGTCTTGATTTGTTTATCCCATTTCATGTTCTTGTTGCATTTTACAGGCGGTGATTTTCAGACTTGATCTGATTCGAAAATTGAAGAGTGGTGCCTAAAAACATATGGAATCTGGGCGAAAGATTGAGGCCGGTGAATCAAATACACATCCTAGCAAAAGTTTAAGCTCCGCCTTATCCTCGGCATCTAATTCCTCCTCCGACAGCTCCTTTGAATTGATTGTAAATGAGCCCGGCCTATACGTTGGTGGTACGACGAGTGACTCTTTGAAAAAGAAAGAGTTGCATGTTGCAGGACACCCGGATTCTGATTTTGCGTTTATCAATGGCAATGAATCTTCCCTTCGTGGTGGTGTGATTGAATTCCCAAAGCCTGCAAAGGACAAAGATATCAAGGCTGTGGTGAAGAACAACAGGTCAGGCAGCGAGGAAACAACTCAATATCCTCAAACTCAAGTGATGGAGCGAGCTGATAATCCTAATTCACCTGGATATAGAATCCCATCTCATGTCTTTTCTAGAACTAAATCTACAACGCCTACAGAATGGAGTGGTGCTTCAAATGAATCATTGTTCAGTATTCAGATGGGAACCATGAGTTTTACCAGAGAACAATTGTGTTGGATAGGAAAATCAGGCGAGCTATATAGGTCTGGTGAATTAGCCATGAGCGTATCCCAGGTTTTGAATATGAAACATTCTGAATGTGGGTTGAAGGGCACCCATCAAGATGGTGATATGGCAGCCACTGAAGCACGATGTGCACAAACAATGAGGGAGGTTATAAGGGAAAATTCAGAAACCAACCGCATGGGAAGTTCTACTCTAACAGAGTCGTCATCTCAGTCAGCCAGCGTTTCTCATCAGTCAGAAAGCAGCACACAATCTTTCCAGTTTCCCATGTAAGCCACTACGTTCTCAAATCCTTATCGACTAATATAGCTTTTGTTTTTATGTTTTGAAGAAAAACATTGTCACTTTTCTTCGAAACTAACTGGTAGAATTGAGGCTGTAAATGGATAAGAGTGGATAAGATGAGCTAATAAAGTATGCAGACTACCCGAATGAAGTATTAGAAGAATGCTCATTAATTTTTCACTCTTAGCACTAAAATTCTTGAGAGCTGTTGCAGATCAATAAATATATGAATGTTTTGTTTGTCCAAATTTAAGATTGTCAGGAGATGGAGCAAAAAGCATTTCTTTTAAGGGAGCAGAACCCGAGAAGGAGAAGGCGAATCACGAGACGAATAATGAATTGCAACATTCAGCTTCATCAAATCCACAGATCCCCAAAGAATCGAGCTCAGACGAATCTCCAAAAGCAGATTCAAATGTGGCTCCTCCAAAGAGATGGCTTTCTTGCTTATCTTGCTGCTCCTTCCGTAGTTGAGAGAAGTGTACAGGTTCAACAAAACTGCCACTGCCCCCCTCTTCTTGTGTAGCTTCTAGGATAATGCATCGGGATAGTTTTGTTAACGACACGAATTTTGTTTTGGTAGACACAGTTTCTCGGTTCTTGGTAACTGGATAAGCCATCTTTGGACGCAAACTTTGTGCTAAATCATCTGTGTCTGATGTTGACAACTTCAGTGCTGATGATGCTGATGAAATTGCAAGAAAGAAAAAACGGTTCAAAGAAGCTCGAAATGATTGTCTCCAATCAAATGTGGCTTCTCGTCTGTCTGTACTTCTCCTTGATGAAACATGA

mRNA sequence

CGTTGGTAGAAAGAGAAAGAGAAGGCTGAAACAATGCGACGCCTCATAACTTCCTTCCCACTCCGTTTTCCATTTTCAATCTCTACTCTCTCTCTCTCTCCTAAATTCTCTCTCTTCCTCCCTCCCATCTCTGTTTCACCATTCTCTCTCTTCCTCGTTCGATTCTATCGGAATCTTTTCTGAATTTGGGTTTCTCTTCTTTTGATCATTCGATAATCCATCCCTTTGCGACATTCCCAATCCGGGACTGTCGGTACCCGGCCGTCGGAGGCCTCTTCTCCTCTTCTCTCCGGCCGAAAGTCTCTATGAGCTTTTCGTCTGTTACTACTTGGGATTGGGAAGTTTTCGACGTAAGTTATCGTTTATCCTGCAACTCTTGACTTTATATTGGATTCTCCTGTTATTCTTTTGATGCCGTCGTGTTTTGTGTTACGATTTGTTGTTATTTGTTCGGTTTCATTTTTTTGCGGATGTAGATATTTGATTTGAAATCGCATGCGAAGTGAACAAAAAGGAGCGATCGAGAAATCACGAATACTTGGGATCTTGAGAGATTTGATGTTATGAGGGGTTAGGCGATGGAATAGTGAACGGGAGATTGTTGAAATGAAGCGCATGGATTATATTTTGGAATGCGATCTCTGTATTTCAGAGTTTCAAGAGGTCGTGGAATGGGGCAAAAGCCGCGCTGTTCTTTTCGAGGTTGCGAGATATTGTTTAGTTCGCGGCGGCGATGAATAATTCACAAGTACTGGTTGAGTTTCAGGAATTGAAATCTAACGATTTCGGGTTATCGCTTAACTTATGTTCGTCATGGATAGAACATAGGCTGGGGATTAAATCCGGATGGCCGAAGAAACTTGTAGGCGCCCCATCTTCCATTTCTCTGATAAACACAATGCGATTGATTTCTCGCTGACAGAAGAGAGCTAGCGAAGTAATCCATTTCTGATTCAATACTCTCTTACGGCGTGATAGAACCTAGATCCAGATATAATCGAATCATAAAGGGTTTGGATGTCTTGATTTGTTTATCCCATTTCATGTTCTTGTTGCATTTTACAGGCGGTGATTTTCAGACTTGATCTGATTCGAAAATTGAAGAGTGGTGCCTAAAAACATATGGAATCTGGGCGAAAGATTGAGGCCGGTGAATCAAATACACATCCTAGCAAAAGTTTAAGCTCCGCCTTATCCTCGGCATCTAATTCCTCCTCCGACAGCTCCTTTGAATTGATTGTAAATGAGCCCGGCCTATACGTTGGTGGTACGACGAGTGACTCTTTGAAAAAGAAAGAGTTGCATGTTGCAGGACACCCGGATTCTGATTTTGCGTTTATCAATGGCAATGAATCTTCCCTTCGTGGTGGTGTGATTGAATTCCCAAAGCCTGCAAAGGACAAAGATATCAAGGCTGTGGTGAAGAACAACAGGTCAGGCAGCGAGGAAACAACTCAATATCCTCAAACTCAAGTGATGGAGCGAGCTGATAATCCTAATTCACCTGGATATAGAATCCCATCTCATGTCTTTTCTAGAACTAAATCTACAACGCCTACAGAATGGAGTGGTGCTTCAAATGAATCATTGTTCAGTATTCAGATGGGAACCATGAGTTTTACCAGAGAACAATTGTGTTGGATAGGAAAATCAGGCGAGCTATATAGGTCTGGTGAATTAGCCATGAGCGTATCCCAGGTTTTGAATATGAAACATTCTGAATGTGGGTTGAAGGGCACCCATCAAGATGGTGATATGGCAGCCACTGAAGCACGATGTGCACAAACAATGAGGGAGGTTATAAGGGAAAATTCAGAAACCAACCGCATGGGAAGTTCTACTCTAACAGAGTCGTCATCTCAGTCAGCCAGCGTTTCTCATCAGTCAGAAAGCAGCACACAATCTTTCCAGTTTCCCATATCCCCAAAGAATCGAGCTCAGACGAATCTCCAAAAGCAGATTCAAATGTGGCTCCTCCAAAGAGATGGCTTTCTTGCTTATCTTGCTGCTCCTTCCGTAGTTGAGAGAAGTGTACAGACACAGTTTCTCGGTTCTTGTGCTGATGATGCTGATGAAATTGCAAGAAAGAAAAAACGGTTCAAAGAAGCTCGAAATGATTGTCTCCAATCAAATGTGGCTTCTCGTCTGTCTGTACTTCTCCTTGATGAAACATGA

Coding sequence (CDS)

ATGGAATCTGGGCGAAAGATTGAGGCCGGTGAATCAAATACACATCCTAGCAAAAGTTTAAGCTCCGCCTTATCCTCGGCATCTAATTCCTCCTCCGACAGCTCCTTTGAATTGATTGTAAATGAGCCCGGCCTATACGTTGGTGGTACGACGAGTGACTCTTTGAAAAAGAAAGAGTTGCATGTTGCAGGACACCCGGATTCTGATTTTGCGTTTATCAATGGCAATGAATCTTCCCTTCGTGGTGGTGTGATTGAATTCCCAAAGCCTGCAAAGGACAAAGATATCAAGGCTGTGGTGAAGAACAACAGGTCAGGCAGCGAGGAAACAACTCAATATCCTCAAACTCAAGTGATGGAGCGAGCTGATAATCCTAATTCACCTGGATATAGAATCCCATCTCATGTCTTTTCTAGAACTAAATCTACAACGCCTACAGAATGGAGTGGTGCTTCAAATGAATCATTGTTCAGTATTCAGATGGGAACCATGAGTTTTACCAGAGAACAATTGTGTTGGATAGGAAAATCAGGCGAGCTATATAGGTCTGGTGAATTAGCCATGAGCGTATCCCAGGTTTTGAATATGAAACATTCTGAATGTGGGTTGAAGGGCACCCATCAAGATGGTGATATGGCAGCCACTGAAGCACGATGTGCACAAACAATGAGGGAGGTTATAAGGGAAAATTCAGAAACCAACCGCATGGGAAGTTCTACTCTAACAGAGTCGTCATCTCAGTCAGCCAGCGTTTCTCATCAGTCAGAAAGCAGCACACAATCTTTCCAGTTTCCCATATCCCCAAAGAATCGAGCTCAGACGAATCTCCAAAAGCAGATTCAAATGTGGCTCCTCCAAAGAGATGGCTTTCTTGCTTATCTTGCTGCTCCTTCCGTAGTTGAGAGAAGTGTACAGACACAGTTTCTCGGTTCTTGTGCTGATGATGCTGATGAAATTGCAAGAAAGAAAAAACGGTTCAAAGAAGCTCGAAATGATTGTCTCCAATCAAATGTGGCTTCTCGTCTGTCTGTACTTCTCCTTGATGAAACATGA

Protein sequence

MESGRKIEAGESNTHPSKSLSSALSSASNSSSDSSFELIVNEPGLYVGGTTSDSLKKKELHVAGHPDSDFAFINGNESSLRGGVIEFPKPAKDKDIKAVVKNNRSGSEETTQYPQTQVMERADNPNSPGYRIPSHVFSRTKSTTPTEWSGASNESLFSIQMGTMSFTREQLCWIGKSGELYRSGELAMSVSQVLNMKHSECGLKGTHQDGDMAATEARCAQTMREVIRENSETNRMGSSTLTESSSQSASVSHQSESSTQSFQFPISPKNRAQTNLQKQIQMWLLQRDGFLAYLAAPSVVERSVQTQFLGSCADDADEIARKKKRFKEARNDCLQSNVASRLSVLLLDET
Homology
[Close]
BLAST of Cp4.1LG04g14630 vs. NCBI nr
Match: XP_023530840.1 (uncharacterized protein LOC111793268 [Cucurbita pepo subsp. pepo] >XP_023530841.1 uncharacterized protein LOC111793268 [Cucurbita pepo subsp. pepo] >XP_023530842.1 uncharacterized protein LOC111793268 [Cucurbita pepo subsp. pepo] >XP_023530843.1 uncharacterized protein LOC111793268 [Cucurbita pepo subsp. pepo] >XP_023530844.1 uncharacterized protein LOC111793268 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 509 bits (1312), Expect = 4.04e-179
Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 0 

Query: 1   MESGRKIEAGESNTHPSKSLSSALSSASNSSSDSSFELIVNEPGLYVGGTTSDSLKKKEL 60
           MESGRKIEAGESNTHPSKSLSSALSSASNSSSDSSFELIVNEPGLYVGGTTSDSLKKKEL
Sbjct: 1   MESGRKIEAGESNTHPSKSLSSALSSASNSSSDSSFELIVNEPGLYVGGTTSDSLKKKEL 60

Query: 61  HVAGHPDSDFAFINGNESSLRGGVIEFPKPAKDKDIKAVVKNNRSGSEETTQYPQTQVME 120
           HVAGHPDSDFAFINGNESSLRGGVIEFPKPAKDKDIKAVVKNNRSGSEETTQYPQTQVME
Sbjct: 61  HVAGHPDSDFAFINGNESSLRGGVIEFPKPAKDKDIKAVVKNNRSGSEETTQYPQTQVME 120

Query: 121 RADNPNSPGYRIPSHVFSRTKSTTPTEWSGASNESLFSIQMGTMSFTREQLCWIGKSGEL 180
           RADNPNSPGYRIPSHVFSRTKSTTPTEWSGASNESLFSIQMGTMSFTREQLCWIGKSGEL
Sbjct: 121 RADNPNSPGYRIPSHVFSRTKSTTPTEWSGASNESLFSIQMGTMSFTREQLCWIGKSGEL 180

Query: 181 YRSGELAMSVSQVLNMKHSECGLKGTHQDGDMAATEARCAQTMREVIRENSETNRMGSST 240
           YRSGELAMSVSQVLNMKHSECGLKGTHQDGDMAATEARCAQTMREVIRENSETNRMGSST
Sbjct: 181 YRSGELAMSVSQVLNMKHSECGLKGTHQDGDMAATEARCAQTMREVIRENSETNRMGSST 240

Query: 241 LTESSSQSASVSHQSESSTQSFQFPI 266
           LTESSSQSASVSHQSESSTQSFQFPI
Sbjct: 241 LTESSSQSASVSHQSESSTQSFQFPI 266

[Close]
BLAST of Cp4.1LG04g14630 vs. NCBI nr
Match: XP_022933614.1 (uncharacterized protein LOC111440990 [Cucurbita moschata] >XP_022933615.1 uncharacterized protein LOC111440990 [Cucurbita moschata] >XP_022933616.1 uncharacterized protein LOC111440990 [Cucurbita moschata] >XP_022933617.1 uncharacterized protein LOC111440990 [Cucurbita moschata] >XP_022933619.1 uncharacterized protein LOC111440990 [Cucurbita moschata] >XP_022933620.1 uncharacterized protein LOC111440990 [Cucurbita moschata])

HSP 1 Score: 494 bits (1271), Expect = 7.00e-173
Identity = 258/266 (96.99%), Postives = 260/266 (97.74%), Query Frame = 0 

Query: 1   MESGRKIEAGESNTHPSKSLSSALSSASNSSSDSSFELIVNEPGLYVGGTTSDSLKKKEL 60
           MESGRKIEAGESNTHPSKSLSS LSSASNSSSDSSFELIVNEPGLYVGGTTSDSLKKKEL
Sbjct: 1   MESGRKIEAGESNTHPSKSLSSTLSSASNSSSDSSFELIVNEPGLYVGGTTSDSLKKKEL 60

Query: 61  HVAGHPDSDFAFINGNESSLRGGVIEFPKPAKDKDIKAVVKNNRSGSEETTQYPQTQVME 120
           HVAGHPDSDFAFINGN S LR GVIEFPKPAKDKDIKAVVKN+RSGSEETTQYPQTQVME
Sbjct: 61  HVAGHPDSDFAFINGNGSPLRDGVIEFPKPAKDKDIKAVVKNSRSGSEETTQYPQTQVME 120

Query: 121 RADNPNSPGYRIPSHVFSRTKSTTPTEWSGASNESLFSIQMGTMSFTREQLCWIGKSGEL 180
           R DNPNSPGYRIPSHVFSRTKSTTPTEWSGASNESLFSIQMGTMSFTREQLCWIGKSGEL
Sbjct: 121 RVDNPNSPGYRIPSHVFSRTKSTTPTEWSGASNESLFSIQMGTMSFTREQLCWIGKSGEL 180

Query: 181 YRSGELAMSVSQVLNMKHSECGLKGTHQDGDMAATEARCAQTMREVIRENSETNRMGSST 240
           YRSGELAMSVSQVLNMKHS+CGLKGTH DGDMAATEARCAQTMREVIRENSETNRMGSST
Sbjct: 181 YRSGELAMSVSQVLNMKHSDCGLKGTHPDGDMAATEARCAQTMREVIRENSETNRMGSST 240

Query: 241 LTESSSQSASVSHQSESSTQSFQFPI 266
           LTESSSQSASVSHQSESSTQSFQFPI
Sbjct: 241 LTESSSQSASVSHQSESSTQSFQFPI 266

[Close]
BLAST of Cp4.1LG04g14630 vs. NCBI nr
Match: KAG6587585.1 (hypothetical protein SDJN03_16150, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021552.1 hypothetical protein SDJN02_15277, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 493 bits (1269), Expect = 1.41e-172
Identity = 258/266 (96.99%), Postives = 259/266 (97.37%), Query Frame = 0 

Query: 1   MESGRKIEAGESNTHPSKSLSSALSSASNSSSDSSFELIVNEPGLYVGGTTSDSLKKKEL 60
           MESGRK EAGESNTHPSKSLSS LSSASNSSSDSSFELIVNEPGLYVGGTTSDSLKKKEL
Sbjct: 1   MESGRKTEAGESNTHPSKSLSSTLSSASNSSSDSSFELIVNEPGLYVGGTTSDSLKKKEL 60

Query: 61  HVAGHPDSDFAFINGNESSLRGGVIEFPKPAKDKDIKAVVKNNRSGSEETTQYPQTQVME 120
           HVAGHPDSDFAFINGN S LR GVIEFPKPAKDKDIK VVKN+RSGSEETTQYPQTQVME
Sbjct: 61  HVAGHPDSDFAFINGNGSPLRDGVIEFPKPAKDKDIKVVVKNSRSGSEETTQYPQTQVME 120

Query: 121 RADNPNSPGYRIPSHVFSRTKSTTPTEWSGASNESLFSIQMGTMSFTREQLCWIGKSGEL 180
           RADNPNSPGYRIPSHVFSRTKSTTPTEWSGASNESLFSIQMGTMSFTREQLCWIGKSGEL
Sbjct: 121 RADNPNSPGYRIPSHVFSRTKSTTPTEWSGASNESLFSIQMGTMSFTREQLCWIGKSGEL 180

Query: 181 YRSGELAMSVSQVLNMKHSECGLKGTHQDGDMAATEARCAQTMREVIRENSETNRMGSST 240
           YRSGELAMSVSQVLNMKHSECGLKGTH DGDMAATEARCAQTMREVIRENSETNRMGSST
Sbjct: 181 YRSGELAMSVSQVLNMKHSECGLKGTHPDGDMAATEARCAQTMREVIRENSETNRMGSST 240

Query: 241 LTESSSQSASVSHQSESSTQSFQFPI 266
           LTESSSQSASVSHQSESSTQSFQFPI
Sbjct: 241 LTESSSQSASVSHQSESSTQSFQFPI 266

[Close]
BLAST of Cp4.1LG04g14630 vs. NCBI nr
Match: XP_022971749.1 (uncharacterized protein LOC111470413 [Cucurbita maxima] >XP_022971752.1 uncharacterized protein LOC111470413 [Cucurbita maxima] >XP_022971753.1 uncharacterized protein LOC111470413 [Cucurbita maxima] >XP_022971756.1 uncharacterized protein LOC111470413 [Cucurbita maxima])

HSP 1 Score: 492 bits (1267), Expect = 2.74e-172
Identity = 258/266 (96.99%), Postives = 261/266 (98.12%), Query Frame = 0 

Query: 1   MESGRKIEAGESNTHPSKSLSSALSSASNSSSDSSFELIVNEPGLYVGGTTSDSLKKKEL 60
           MESGRKIEAGESNTHPSK+LSSALSSASNSSSDSSFEL+VNEPGLYVGGTTSDSLKK EL
Sbjct: 1   MESGRKIEAGESNTHPSKTLSSALSSASNSSSDSSFELVVNEPGLYVGGTTSDSLKK-EL 60

Query: 61  HVAGHPDSDFAFINGNESSLRGGVIEFPKPAKDKDIKAVVKNNRSGSEETTQYPQTQVME 120
           H AGHPDSDFAFINGNESSLR GVIEFPKPAKDKDIKAVVKN+RSGSEETTQYPQTQVME
Sbjct: 61  HAAGHPDSDFAFINGNESSLRDGVIEFPKPAKDKDIKAVVKNSRSGSEETTQYPQTQVME 120

Query: 121 RADNPNSPGYRIPSHVFSRTKSTTPTEWSGASNESLFSIQMGTMSFTREQLCWIGKSGEL 180
           RADNPNSPGYRIPSHVFSRTKSTTPTEWSGASNESLFSIQMGTMSFTREQLCWIGKSGEL
Sbjct: 121 RADNPNSPGYRIPSHVFSRTKSTTPTEWSGASNESLFSIQMGTMSFTREQLCWIGKSGEL 180

Query: 181 YRSGELAMSVSQVLNMKHSECGLKGTHQDGDMAATEARCAQTMREVIRENSETNRMGSST 240
           YRSGELAMSVSQ LNMKHSECGLKGTHQDGDMA TEARCAQTMREVIRENSETNRMGSST
Sbjct: 181 YRSGELAMSVSQALNMKHSECGLKGTHQDGDMAVTEARCAQTMREVIRENSETNRMGSST 240

Query: 241 LTESSSQSASVSHQSESSTQSFQFPI 266
           LTESSSQSASVSHQSESSTQSFQFPI
Sbjct: 241 LTESSSQSASVSHQSESSTQSFQFPI 265

[Close]
BLAST of Cp4.1LG04g14630 vs. NCBI nr
Match: XP_022135351.1 (uncharacterized protein LOC111007326 isoform X2 [Momordica charantia])

HSP 1 Score: 298 bits (763), Expect = 1.30e-94
Identity = 192/358 (53.63%), Postives = 218/358 (60.89%), Query Frame = 0 

Query: 1   MESGRKIEAGESNTHP------------SKSLSSALSSASNSSSDSSFELIVNEPGLYVG 60
           MESG+KIEAGES THP            SK L S+LSSAS+SSSDSSFELI+N+   + G
Sbjct: 1   MESGQKIEAGESKTHPISSTGEVGLPISSKKLVSSLSSASDSSSDSSFELILNDSSEFPG 60

Query: 61  GTTSDSLKKKELHVAGHPDSDFAFINGN-------------------------------E 120
           GT SD LK KEL+VAGH +S+F FI+ +                               E
Sbjct: 61  GT-SDPLKTKELNVAGHSESEFEFISSDDIETRSAANLPSAAKTSSRSLSRSSSSSSASE 120

Query: 121 SSLRGGVIEFPKPAKDKDIKAVVKNNRS-------------------------------- 180
           SSL   VIE PKP K+KD K  V NN S                                
Sbjct: 121 SSLCDHVIELPKPEKNKDSKGGVSNNPSSPSMDKDNRLVEDFSDDDVPISSMASNGQSPA 180

Query: 181 ----------GSEETTQYPQTQVMERADNPNSPGYRIPSHVFSRTKSTTPTEWSGASNES 240
                     GSE  TQYPQTQ+MER D+PNSP YRIPSHVFSRTKS +  EWS ASNES
Sbjct: 181 APTNRIDLSAGSEAATQYPQTQLMERVDDPNSPSYRIPSHVFSRTKSKSAMEWSVASNES 240

Query: 241 LFSIQMGTMSFTREQLCWIGKSGELYRSGELAMSV-------SQVLNMKHSECGLKGTHQ 266
           LFSI MG MSFTREQLCW+GKSGELYR GE AMS         Q L +K S+ GLKGTH 
Sbjct: 241 LFSIHMGNMSFTREQLCWLGKSGELYRPGETAMSPLIDLPSHDQPLTIKPSDGGLKGTHP 300

[Close]
BLAST of Cp4.1LG04g14630 vs. ExPASy TrEMBL
Match: A0A6J1F089 (uncharacterized protein LOC111440990 OS=Cucurbita moschata OX=3662 GN=LOC111440990 PE=4 SV=1)

HSP 1 Score: 494 bits (1271), Expect = 3.39e-173
Identity = 258/266 (96.99%), Postives = 260/266 (97.74%), Query Frame = 0 

Query: 1   MESGRKIEAGESNTHPSKSLSSALSSASNSSSDSSFELIVNEPGLYVGGTTSDSLKKKEL 60
           MESGRKIEAGESNTHPSKSLSS LSSASNSSSDSSFELIVNEPGLYVGGTTSDSLKKKEL
Sbjct: 1   MESGRKIEAGESNTHPSKSLSSTLSSASNSSSDSSFELIVNEPGLYVGGTTSDSLKKKEL 60

Query: 61  HVAGHPDSDFAFINGNESSLRGGVIEFPKPAKDKDIKAVVKNNRSGSEETTQYPQTQVME 120
           HVAGHPDSDFAFINGN S LR GVIEFPKPAKDKDIKAVVKN+RSGSEETTQYPQTQVME
Sbjct: 61  HVAGHPDSDFAFINGNGSPLRDGVIEFPKPAKDKDIKAVVKNSRSGSEETTQYPQTQVME 120

Query: 121 RADNPNSPGYRIPSHVFSRTKSTTPTEWSGASNESLFSIQMGTMSFTREQLCWIGKSGEL 180
           R DNPNSPGYRIPSHVFSRTKSTTPTEWSGASNESLFSIQMGTMSFTREQLCWIGKSGEL
Sbjct: 121 RVDNPNSPGYRIPSHVFSRTKSTTPTEWSGASNESLFSIQMGTMSFTREQLCWIGKSGEL 180

Query: 181 YRSGELAMSVSQVLNMKHSECGLKGTHQDGDMAATEARCAQTMREVIRENSETNRMGSST 240
           YRSGELAMSVSQVLNMKHS+CGLKGTH DGDMAATEARCAQTMREVIRENSETNRMGSST
Sbjct: 181 YRSGELAMSVSQVLNMKHSDCGLKGTHPDGDMAATEARCAQTMREVIRENSETNRMGSST 240

Query: 241 LTESSSQSASVSHQSESSTQSFQFPI 266
           LTESSSQSASVSHQSESSTQSFQFPI
Sbjct: 241 LTESSSQSASVSHQSESSTQSFQFPI 266

[Close]
BLAST of Cp4.1LG04g14630 vs. ExPASy TrEMBL
Match: A0A6J1I7V9 (uncharacterized protein LOC111470413 OS=Cucurbita maxima OX=3661 GN=LOC111470413 PE=4 SV=1)

HSP 1 Score: 492 bits (1267), Expect = 1.33e-172
Identity = 258/266 (96.99%), Postives = 261/266 (98.12%), Query Frame = 0 

Query: 1   MESGRKIEAGESNTHPSKSLSSALSSASNSSSDSSFELIVNEPGLYVGGTTSDSLKKKEL 60
           MESGRKIEAGESNTHPSK+LSSALSSASNSSSDSSFEL+VNEPGLYVGGTTSDSLKK EL
Sbjct: 1   MESGRKIEAGESNTHPSKTLSSALSSASNSSSDSSFELVVNEPGLYVGGTTSDSLKK-EL 60

Query: 61  HVAGHPDSDFAFINGNESSLRGGVIEFPKPAKDKDIKAVVKNNRSGSEETTQYPQTQVME 120
           H AGHPDSDFAFINGNESSLR GVIEFPKPAKDKDIKAVVKN+RSGSEETTQYPQTQVME
Sbjct: 61  HAAGHPDSDFAFINGNESSLRDGVIEFPKPAKDKDIKAVVKNSRSGSEETTQYPQTQVME 120

Query: 121 RADNPNSPGYRIPSHVFSRTKSTTPTEWSGASNESLFSIQMGTMSFTREQLCWIGKSGEL 180
           RADNPNSPGYRIPSHVFSRTKSTTPTEWSGASNESLFSIQMGTMSFTREQLCWIGKSGEL
Sbjct: 121 RADNPNSPGYRIPSHVFSRTKSTTPTEWSGASNESLFSIQMGTMSFTREQLCWIGKSGEL 180

Query: 181 YRSGELAMSVSQVLNMKHSECGLKGTHQDGDMAATEARCAQTMREVIRENSETNRMGSST 240
           YRSGELAMSVSQ LNMKHSECGLKGTHQDGDMA TEARCAQTMREVIRENSETNRMGSST
Sbjct: 181 YRSGELAMSVSQALNMKHSECGLKGTHQDGDMAVTEARCAQTMREVIRENSETNRMGSST 240

Query: 241 LTESSSQSASVSHQSESSTQSFQFPI 266
           LTESSSQSASVSHQSESSTQSFQFPI
Sbjct: 241 LTESSSQSASVSHQSESSTQSFQFPI 265

[Close]
BLAST of Cp4.1LG04g14630 vs. ExPASy TrEMBL
Match: A0A6J1C0F1 (uncharacterized protein LOC111007326 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007326 PE=4 SV=1)

HSP 1 Score: 298 bits (763), Expect = 6.27e-95
Identity = 192/358 (53.63%), Postives = 218/358 (60.89%), Query Frame = 0 

Query: 1   MESGRKIEAGESNTHP------------SKSLSSALSSASNSSSDSSFELIVNEPGLYVG 60
           MESG+KIEAGES THP            SK L S+LSSAS+SSSDSSFELI+N+   + G
Sbjct: 1   MESGQKIEAGESKTHPISSTGEVGLPISSKKLVSSLSSASDSSSDSSFELILNDSSEFPG 60

Query: 61  GTTSDSLKKKELHVAGHPDSDFAFINGN-------------------------------E 120
           GT SD LK KEL+VAGH +S+F FI+ +                               E
Sbjct: 61  GT-SDPLKTKELNVAGHSESEFEFISSDDIETRSAANLPSAAKTSSRSLSRSSSSSSASE 120

Query: 121 SSLRGGVIEFPKPAKDKDIKAVVKNNRS-------------------------------- 180
           SSL   VIE PKP K+KD K  V NN S                                
Sbjct: 121 SSLCDHVIELPKPEKNKDSKGGVSNNPSSPSMDKDNRLVEDFSDDDVPISSMASNGQSPA 180

Query: 181 ----------GSEETTQYPQTQVMERADNPNSPGYRIPSHVFSRTKSTTPTEWSGASNES 240
                     GSE  TQYPQTQ+MER D+PNSP YRIPSHVFSRTKS +  EWS ASNES
Sbjct: 181 APTNRIDLSAGSEAATQYPQTQLMERVDDPNSPSYRIPSHVFSRTKSKSAMEWSVASNES 240

Query: 241 LFSIQMGTMSFTREQLCWIGKSGELYRSGELAMSV-------SQVLNMKHSECGLKGTHQ 266
           LFSI MG MSFTREQLCW+GKSGELYR GE AMS         Q L +K S+ GLKGTH 
Sbjct: 241 LFSIHMGNMSFTREQLCWLGKSGELYRPGETAMSPLIDLPSHDQPLTIKPSDGGLKGTHP 300

[Close]
BLAST of Cp4.1LG04g14630 vs. ExPASy TrEMBL
Match: A0A6J1C0E0 (suppressor protein SRP40 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007326 PE=4 SV=1)

HSP 1 Score: 283 bits (723), Expect = 1.70e-88
Identity = 192/391 (49.10%), Postives = 219/391 (56.01%), Query Frame = 0 

Query: 1   MESGRKIEAGESNTHP------------SKSLSSALSSASNSSSDSSFELIVNEPGLYVG 60
           MESG+KIEAGES THP            SK L S+LSSAS+SSSDSSFELI+N+   + G
Sbjct: 1   MESGQKIEAGESKTHPISSTGEVGLPISSKKLVSSLSSASDSSSDSSFELILNDSSEFPG 60

Query: 61  GTTSDSLKKKELHVAGHPDSDFAFINGN-------------------------------E 120
           GT SD LK KEL+VAGH +S+F FI+ +                               E
Sbjct: 61  GT-SDPLKTKELNVAGHSESEFEFISSDDIETRSAANLPSAAKTSSRSLSRSSSSSSASE 120

Query: 121 SSLRGGVIEFPKPAKDKDIKAV---------------------------------VKNNR 180
           SSL   VIE PKP K+KD K +                                 V NN 
Sbjct: 121 SSLCDHVIELPKPEKNKDSKVMEADLSKSLQTSSSSSSSSSESEAKRKIKLQQGGVSNNP 180

Query: 181 S------------------------------------------GSEETTQYPQTQVMERA 240
           S                                          GSE  TQYPQTQ+MER 
Sbjct: 181 SSPSMDKDNRLVEDFSDDDVPISSMASNGQSPAAPTNRIDLSAGSEAATQYPQTQLMERV 240

Query: 241 DNPNSPGYRIPSHVFSRTKSTTPTEWSGASNESLFSIQMGTMSFTREQLCWIGKSGELYR 266
           D+PNSP YRIPSHVFSRTKS +  EWS ASNESLFSI MG MSFTREQLCW+GKSGELYR
Sbjct: 241 DDPNSPSYRIPSHVFSRTKSKSAMEWSVASNESLFSIHMGNMSFTREQLCWLGKSGELYR 300

[Close]
BLAST of Cp4.1LG04g14630 vs. ExPASy TrEMBL
Match: A0A0A0LUN5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G013790 PE=4 SV=1)

HSP 1 Score: 262 bits (669), Expect = 2.15e-80
Identity = 184/392 (46.94%), Postives = 209/392 (53.32%), Query Frame = 0 

Query: 1   MESGRKIEAGESNTHP------------SKSLSSALSSASNSSSDSSFELIVNEPGLYVG 60
           MESG+KIEA ES TH             S  L+S+LSSAS+SSSDSSFELIV      +G
Sbjct: 1   MESGQKIEAIESKTHSISSTSGVDHSISSNKLASSLSSASDSSSDSSFELIVTGLDGSIG 60

Query: 61  GTTSDSLKKKELHVAGHPDSDFAFI------------------------------NGNES 120
              SDSLKK ELHV G  DS F FI                              + +ES
Sbjct: 61  -VASDSLKKDELHVVGRSDSGFVFITSDDVGTHSPKTDLPGTAKIPSQSLSRSSSSSSES 120

Query: 121 SLRGGVIEFPKPA----------------------------------------------K 180
           SL   VIE PKP                                               K
Sbjct: 121 SLHDHVIELPKPVEPDSKKRLPGLKHGETNNVESRKSIQTCSSTSSSSSSESESKHKLQK 180

Query: 181 DKDIK----------AVVKNNR----------------------------SGSEETTQYP 240
            +D+           +VVK+NR                            SG E  TQYP
Sbjct: 181 GRDVDNLLSKNPSSPSVVKDNRLVTDFSDDDVPTSNGQSAVTPTHRVDSSSGCETPTQYP 240

Query: 241 QTQVMERADNPNSPGYRIPSHVFSRTKSTTPTEWSGASNESLFSIQMGTMSFTREQLCWI 266
           QTQ+M+R ++P SP YRIPS VFSRTKST P EWS ASNESLFSIQMG MSFTREQLCW+
Sbjct: 241 QTQMMDRVEDPTSPAYRIPSRVFSRTKSTAPMEWSVASNESLFSIQMGNMSFTREQLCWL 300

[Close]
BLAST of Cp4.1LG04g14630 vs. TAIR 10
Match: AT2G03630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G74220.1); Has 126 Blast hits to 126 proteins in 28 species: Archae - 0; Bacteria - 6; Metazoa - 7; Fungi - 5; Plants - 87; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). )

HSP 1 Score: 70.1 bits (170), Expect = 4.0e-12
Identity = 49/111 (44.14%), Postives = 63/111 (56.76%), Query Frame = 0 

Query: 76  NESSLRGGVIEFPKPAKDKDIKAVVKNNRSGSEETTQYPQTQVMERADNPNSPGYRIPSH 135
           + SS       +  P KD   + V+K + +  E ++  P  QVM+R +N      RIPS 
Sbjct: 57  SSSSSSSSSSSYLSPPKDLP-EEVLKESLNDPEISS--PPVQVMDRDNNGKYDPNRIPSS 116

Query: 136 VFSRTKSTTPTEWSGASNESLFSIQMGTMSFTREQLCWIGKSGELYRSGEL 187
           VF R+KS  P EWS  SNESLFSI +G  SFT      + KSGELY+SGEL
Sbjct: 117 VFERSKSNVPAEWSCTSNESLFSIHLGNNSFTGYG-GDLMKSGELYKSGEL 163

[Close]
BLAST of Cp4.1LG04g14630 vs. TAIR 10
Match: AT2G03630.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G74220.1); Has 87 Blast hits to 87 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 70.1 bits (170), Expect = 4.0e-12
Identity = 49/111 (44.14%), Postives = 63/111 (56.76%), Query Frame = 0 

Query: 76  NESSLRGGVIEFPKPAKDKDIKAVVKNNRSGSEETTQYPQTQVMERADNPNSPGYRIPSH 135
           + SS       +  P KD   + V+K + +  E ++  P  QVM+R +N      RIPS 
Sbjct: 57  SSSSSSSSSSSYLSPPKDLP-EEVLKESLNDPEISS--PPVQVMDRDNNGKYDPNRIPSS 116

Query: 136 VFSRTKSTTPTEWSGASNESLFSIQMGTMSFTREQLCWIGKSGELYRSGEL 187
           VF R+KS  P EWS  SNESLFSI +G  SFT      + KSGELY+SGEL
Sbjct: 117 VFERSKSNVPAEWSCTSNESLFSIHLGNNSFTGYG-GDLMKSGELYKSGEL 163

[Close]
BLAST of Cp4.1LG04g14630 vs. TAIR 10
Match: AT1G74220.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G03630.1); Has 383 Blast hits to 347 proteins in 86 species: Archae - 0; Bacteria - 17; Metazoa - 87; Fungi - 65; Plants - 76; Viruses - 2; Other Eukaryotes - 136 (source: NCBI BLink). )

HSP 1 Score: 67.0 bits (162), Expect = 3.4e-11
Identity = 64/190 (33.68%), Postives = 89/190 (46.84%), Query Frame = 0 

Query: 112 QYPQTQVMERADN---------PNSPGYRIPSHVFSRTKSTTPTEWSGASNESLFSIQMG 171
           Q P TQVMER+ N         PN+P YRIPSHVF+RT ST P EWS  SNESLFSI MG
Sbjct: 61  QSPPTQVMERSTNNTTTTTTSTPNTPPYRIPSHVFARTTSTAP-EWSTISNESLFSIHMG 120

Query: 172 TMSFTREQLCWIGKSGELYRSGELAMS----------VSQVLNMKH--SECGLKGTHQDG 231
             SFT          G+ ++SGEL              S + +  H  ++ G  G   + 
Sbjct: 121 NNSFT---------GGDYFKSGELTFPQPPSPITSPLPSPLPSTPHNVNQGGAVGAAAEV 180

Query: 232 DMAATEARCAQTMREVIRENSETNRMGSSTLTE-------------SSSQSASVSHQSES 267
                  + A    +  R + E  +  ++++ E             ++    SVS +SE+
Sbjct: 181 KTPVDIGKKAAETDKAYRASKEDEQKAAASIREVIMANEAANNNNKTNKLDRSVSRRSEN 240

The following BLAST results are available for this feature:
BLAST of Cp4.1LG04g14630 vs.
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG04g14630 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023530840.14.04e-179100.00uncharacterized protein LOC111793268 [Cucurbita pepo subsp. pepo] >XP_023530841.... [more]
XP_022933614.17.00e-17396.99uncharacterized protein LOC111440990 [Cucurbita moschata] >XP_022933615.1 unchar... [more]
KAG6587585.11.41e-17296.99hypothetical protein SDJN03_16150, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022971749.12.74e-17296.99uncharacterized protein LOC111470413 [Cucurbita maxima] >XP_022971752.1 uncharac... [more]
XP_022135351.11.30e-9453.63uncharacterized protein LOC111007326 isoform X2 [Momordica charantia][more]
BLAST of Cp4.1LG04g14630 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1F0893.39e-17396.99uncharacterized protein LOC111440990 OS=Cucurbita moschata OX=3662 GN=LOC1114409... [more]
A0A6J1I7V91.33e-17296.99uncharacterized protein LOC111470413 OS=Cucurbita maxima OX=3661 GN=LOC111470413... [more]
A0A6J1C0F16.27e-9553.63uncharacterized protein LOC111007326 isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A6J1C0E01.70e-8849.10suppressor protein SRP40 isoform X1 OS=Momordica charantia OX=3673 GN=LOC1110073... [more]
A0A0A0LUN52.15e-8046.94Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G013790 PE=4 SV=1[more]
BLAST of Cp4.1LG04g14630 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G03630.14.0e-1244.14unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT2G03630.24.0e-1244.14unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G74220.13.4e-1133.68unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..150
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 232..266
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..35
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..35
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 228..266
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 131..150
NoneNo IPR availablePANTHERPTHR33673SUPPRESSOR SRP40-LIKE PROTEINcoord: 12..274
NoneNo IPR availablePANTHERPTHR33673:SF22SMOOTHELIN-LIKE PROTEIN 1coord: 12..274

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g14630.1Cp4.1LG04g14630.1mRNA