Cp4.1LG04g14030 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATAGTGTGATTTAAACATTTAAGACACTAAGGAGCTGATGGGGAAGCTTACCGATTTGATGATTCAACGGCATCCGATCACGTGGTACATGATTCACGTGGCATTTGCAGGCGCTTCCACGAGGATTTAAGACCGACAAAGGTAAGCGTCTTTTCATATGCCACGTGTCTATTTCTCAGTGGCTGAATAACAGCAAATATAAAAAAATGCGATGAGTATCTAGAACGTTCTTACGAACGGACGTCAAAAGCTGGATTTAAATTTACTTAATTTTCAGACATTTTTGGTTTATATTAAGCTACGGAATATCAATTTTCTCGTTTAACAATTAAAAGCAGAATTTATTTTTTAATTTGAAGTAAAATAAAATAAAATAAAAACTGTACGCGCCAAATGTGTGCAATTCCCGACTATTTAATGGCCGGATTTTGGCTCCTCCTCTACCCCGTCACAAACTCTCTTTCTCTCTGTAGTTTTTACTTGACTCTGTCATTTTCATGCGATTTCTGGTTCTCTTTTTATCAGTTCCTCTGTGTTAAGGATAGTTGACCGTTCACTAGATATTTGCCTTTACCATATTTGCCCTCTTATTAAAGGCAAATATATTGCATTCATTTATTATACTTTCCTTTTATTACTATTTCCATATTATTTGTAATTTACCATATTTCTGTATCCTGAAAATGATTATAAATAAGAGAACTCTCACCCCCATTTAGGTGTGGTGATTCAGCAAACATTCACATGGTATCAGAGCCCTTTCGGTTTAACACCCTGATCCTTTCTTCTCTATGGCTTCCGAATCTTCTTATCATCTTCTTCCTTTCAATACTCTAATCCATATGATCACCATCAAACTTTCTTCCTCCAATTATCTTCTTTGGAAAAGCCAACTTCTCCCTCTCCTTGAGAGTCAAGACATGCTGGGCTATGTCGATGGAACTATGGTTCCACCACCTCGCTTTGAACCAGAAACCTCTTCAACACTCAACCCCAAATATTTGGCATGGAGAGCAGCCGATCAACGACTTCTCTGTCTCCTGCTCTCCTCTCTCACTGAGGAAGCCATGGCTGTTGTCGTTGGTCTCTCTACTGCACGTGATGTTTGGCTTGCGTTGGAAACTACGTTCAGCCATCAGTCGAAAGCTCGTGAACTGAGACTCAAGGATGACTTGCAGTTGATGAAACGTGGCACCAAACCTGTTGCTGAGTATGCCCGTGCCTTCAAAAAAATTTGTGACCAACTTCATGCCATCGGCAGACCGGTCGAGGACATTGATAAAGTGCACTGGTTCCTTCGTGGACTCGGCACCGAATTTTCAGCTTTTTCTACTGCTCAGATGGCTCTCACCTCTATCCCCTGTTTTGCAGATTTAGTCTCTAAAGCTGAAAGTTTTGAGTTGTTTCAGCTCTCCCTTGAGTCCTCTAACTCCACTCCTACAGCATTCACAGTCACTAATCGTGGTCGCACCCATGGAAGCCACCCTGCTTCCTTTACCAACCAGCGAGGTCGTTCTTATTCTCACAAAAACAACTCTTTTAATCGAGGACGAACCCACTCAAGTCAAGGTCGTCGACCACCTCACTGCCAAATATGCCGCAAAGAGGGCCATTATGCTGACCGCTGCAACCAACGGTATGTTCGACCTGATTCTTCTCATGCTCACCTTGCTGAAGCCTTTAACACGTCATGTTCTATTGCTGGACCCGATACTGCTGATTGGTTTCTGGACACTGGAGCTTCGGCCCATATGACTGCCGACCCATCTATTTTGGATCAGTCTAAAAATTACACGGGTAAGGACTCTGTGATTGTAGGAAACGGTGCATCCCTACCCATTACCCACACCGGTACTCTTTCTCCTGTTCCAAATATTCACTTGTTAGATGTCTTGGTTGTCCCTCACCTCACTAAAAATCTTCTTTCCATAAGTAAATTAACGTCTGATTTTCCTCTCTCCGTTACATTTACTAATAATCTTATTACTATCCAGAATCGTCAAACAGGAAGGGTGGTGGCAACCGGTAAAAGAGATGGAGGGCTATATGTGCTGGAGCGCGGCAACTCTGCTTTTATTTCAGCCCTTAGAAACAAATCTTTACGTGCTTCATATGATTTATGGCATGCTCGTCTAGGTCATGTGAATCATTCTGTTATTTCTTTTTTAAATAGAAAAGGTCATCTTTCTCTTACGTCTTTATTGCCTTCTCCATCATTATGTAATACTTGTCAGCTTGCGAAAAGTCATCGATTGCCTTATTCCCGCAATGAACGTAGGTCGTCTCATGTGTTAGATCTTATTCATTGTGATCTTTGGGGTCCTTCTCCCGTCAAATCAAATTCGGGTTTCCTTTATTATGTTATTTTTATTGATGATTATTCTCGATTCACTTGGTTTTACCCTTTAAAATTTAAATCTGATTTTTTTGATATTTTTCTTCAATTTCAAAAATTTGTGGAAAATCAATATTCTTCTCGTATCAAGGTATTTCAAAGCGATGGTGGTACCGAATTTACTAGTACTTGTTTCAAAACTCATTTACGTAATTCTGGCATCCACCATCAACTCTCTTGTCCATATACACCTGCTCAAAATGGTCGTGCTGAGAGAAAACATCGTCATGTGACTGAGACTGGCTTGGCCCTTCTCTTTCACTCTCATCTTTCTTCTCGTTTTTGGGTTGACGCCTTCAGCACTGCAGCTTATATTATCAACCGGTTGCCTACTCCACTTCTTGGAGGTAAGTCACCCTTTGAACTCCTTTATGGCTACACTCCACATTATGACAATTTTCATCCCTTTGGTTGTCGTGTTTATCCTTATTTGCGTGATTATGTGCCTAACAAGCTTTCTCCCCGCAGCATTCCTTGTATTTTTTTGGGTTATAGTCCTGCTCATAAAGGGTTCCGCTGTCTTGATCCGGCCACCACTAAGCTATATATCACCTGTCATGCTCAATTTGATGAAACCCACTTTCCTGCTATCCCTAGCTCCCAGACCCAACCTCTTTCCTCTATTCCTATTTCAAATTTCTTAGAACCACATTTTCATCATATTGATTCATCCCCCCCTACCACTTCATCACCGCAAACTCCTCGATCCAGTTCATCCCCATGTGATATTTGTTCTGACCTTGTAGATGAGTCTGTGCAGGTTGATACTTCTCTTGCAGGTTCCACTTTGCCACCCTCGACTTCTAATTCGACCTCTATTGAACCTCCTGTTGATTTCTCTTCTTTGGGCACTCATCCTATGATCACACGAGCCAAAGCTGGTATATTCAAGACTCGTCATCCAGCAAATCTTGGTATTTTGGGCTCATCTGGACTTCTTTCTGCTCTTCTTGCATCCACTGAGCCAAAAGGATTCAAATCTGCGGCTAAGAATCCTGCTTGGGTGGCTGCCATGGATGAAGAAATTCGAGCATTACAACAAAATGATACTTGGACTTTGGTTCCTCGCCCTGCCAACACCAACATCGTGGGCTCTAAATGGGTGTTTCGTATTAAATATTTGCCTGATGGATCTGTCGAGCGTTTCAAGGCTCGTCTTGTTGCCAAAGGTTATACTCAGGTTCCTGGTCTTGACTACACTGACACTTTTAGTCCGGTTGTCAAAGCTACCACTGTCCGTGTTGTGCTTTCTATTGCAGTCACAAATAAATGGCCTCTTCGACAACTTGATGTCAAGAATGCTTTTCTCAATGGAACTCTTATTGAACGTGTTCATATGGAACAACCTCCTGGGTATATTGATCCTCGATTTCCCACTCATGTTTGTCTATTAAAGAAAGCCCTCTATGGTTTAAAGCAAGCTCCTCGTGCTTGGTTTCAGCGTTTTAGCTCATTTCTTCTCACACTTGGGTTTTCTTGCAGTCGCGCTGACACGTCCCTTTTTGTCTTTCATCAGCAATCTAACATTATCTATTTGCTTCTTTATGTTGATGACATTATTGTTACCGGCAACAACTCATCTCTTATTGACAGCTTTACTCGCAAGCTTCATTCTGAGTTTGCTACCAAAGATTTGGGTTCTCTCAGTTACTTTCTTGGTCTTGAAGCTTCACCCACTCCTGATGGTCTCTTTATTAGTCAGTTAAAATATGCTCGAGATATTCTTACTCGTGCTCAGTTGCTCGATAGCAAACCAGTTCACACTCCCATGGTTGTTTCTCAACACCTGACTGCTGATGGTTCTCCTTTCTCTGATCCTACTCTCTACAGATCTCTTGTTGGCGCCCTTCAGTACTTGACTATTACGCGTCCAGATATTGCCTATGCTGTCAATTCTGTCAGTCAATTCTTGCATGCCCCTACTGCAGATCACTTTCTTGCTGTCAAACGTATTCTTCGCTATGTCAAAGGAACACTCCACTTTGGTCTTACCTTTCGTCCATCCACTGTTCCTAGTACGCTAGTCGCTTATTCGGATGCTGACTGGGCTGGTTGTCCCGATACTCGTCGTTCTACATCCGGCTATTCTATTTATCTTGGTAACAATCTGGTTTCTTGGAGTGCCAAAAAGCAACCTACTGTCTCACGCTCCAGCTGTGAATCTGAGTATCGTGCTCTTGCCACAACCGCTGCTGAACTTCTTTGGGTTATGCATCTTTTGCATGACCTCAAGGTCCCTATTTCACAGCAGCCCTTACTCTTATGTGACAACAAAAGTGCTATTTTTTTGAGCTCTAATCCCGTTTCTCACAAGCGGGCCAAACATGTTGAACTAGATTATCATTTTCTTCGAGAACTTGTTATCGCTGGCAAACTTCACACACAATATGTACCCTCTCATCTCCAAGTTGCTGACATCTTCACAAAGAGTATTTCTCGACCTCTCTTTGAATTTTTTAGATCCAAGCTTTACGTTCGTTCAAATCCGACGCTCAGCTTGCGGGGGGGTGTTAAGGATAGTTGACCGTTCACTAGATATTTGCCTTTACCATATTTGCCCTCTTATTAAAGGCAAATATATTGCATTCATTTATTATACTTTCCTTTTATTACTATTTCCATATTATTTGTAATTTACCATATTTCCGTATCCTGAAAATGATTATAAATAAGAGAACTCTCACCCCCATTTAGGTGTGGTGATTCAGCAAACATTCACACTCTGTAATGGAACCTTGCATTGATAGTAGGAAGCGAGTACGAGATGAATCGAATGAATCTCTGTTCAATTTTGTCGGCTCCAAGATCCTCCGATTTGATTCCGCTGAATTCAATTTCATCTCGCCGGATTTTGACGATGCACCGGTTGATTCCGTTTCATCAGATGCAGAATCGATCGTTTCAAAACAGAGTGGAGCTATTCACAGCAATGATTCAGGCCTGGACTCCTTTCAGCCACTTCCAATTCGGGAAGACCTACTGAAGATTCTCGACGAAGCCGACGTTTCCATAGATCGCGAATTGGCGATTCCAGATCTCGACTCTGTGATCAGTAGCTTCGAGAAGGAAATAAACGTCCCGGTGCCTGCTGTTCAACCGGAACTTGGATACCTTCTAGAAGCCTCGGACGACGAATTAGGGCTTCCGCCCGCCGCCTTGAAAGGGGAGATGGAGCCTGTTAATTTTGGGGGCAAATATTCAGGTATCGCCGGTATGAAAGGATTCTTAGGATTTGAGGACGAAGTTCCTAATTACTGTTGGCTCGAAAATTTGAGCAGTGAGATTGAATGGAATCGGAGTGAAGACGAGGTGGCGGCGTTGGGTGGATTGTTGGATCATAATACGGACGGAGCGGTGGAGATGCCGCCGTATCGATCGGAGACCATGTTCTGTTTATAG ATGAATAGAGCTGATGGGGAAGCTTACCGATTTGATGATTCAACGGCATCCGATCACGTGGTACATGATTCACGTGGCATTTGCAGGCGCTTCCACGAGGATTTAAGACCGACAAAGATCCTCCGATTTGATTCCGCTGAATTCAATTTCATCTCGCCGGATTTTGACGATGCACCGGTTGATTCCGTTTCATCAGATGCAGAATCGATCGTTTCAAAACAGAGTGGAGCTATTCACAGCAATGATTCAGGCCTGGACTCCTTTCAGCCACTTCCAATTCGGGAAGACCTACTGAAGATTCTCGACGAAGCCGACGTTTCCATAGATCGCGAATTGGCGATTCCAGATCTCGACTCTGTGATCAGTAGCTTCGAGAAGGAAATAAACGTCCCGGTGCCTGCTGTTCAACCGGAACTTGGATACCTTCTAGAAGCCTCGGACGACGAATTAGGGCTTCCGCCCGCCGCCTTGAAAGGGGAGATGGAGCCTGTTAATTTTGGGGGCAAATATTCAGGTATCGCCGGTATGAAAGGATTCTTAGGATTTGAGGACGAAGTTCCTAATTACTGTTGGCTCGAAAATTTGAGCAGTGAGATTGAATGGAATCGGAGTGAAGACGAGGTGGCGGCGTTGGGTGGATTGTTGGATCATAATACGGACGGAGCGGTGGAGATGCCGCCGTATCGATCGGAGACCATGTTCTGTTTATAG ATGAATAGAGCTGATGGGGAAGCTTACCGATTTGATGATTCAACGGCATCCGATCACGTGGTACATGATTCACGTGGCATTTGCAGGCGCTTCCACGAGGATTTAAGACCGACAAAGATCCTCCGATTTGATTCCGCTGAATTCAATTTCATCTCGCCGGATTTTGACGATGCACCGGTTGATTCCGTTTCATCAGATGCAGAATCGATCGTTTCAAAACAGAGTGGAGCTATTCACAGCAATGATTCAGGCCTGGACTCCTTTCAGCCACTTCCAATTCGGGAAGACCTACTGAAGATTCTCGACGAAGCCGACGTTTCCATAGATCGCGAATTGGCGATTCCAGATCTCGACTCTGTGATCAGTAGCTTCGAGAAGGAAATAAACGTCCCGGTGCCTGCTGTTCAACCGGAACTTGGATACCTTCTAGAAGCCTCGGACGACGAATTAGGGCTTCCGCCCGCCGCCTTGAAAGGGGAGATGGAGCCTGTTAATTTTGGGGGCAAATATTCAGGTATCGCCGGTATGAAAGGATTCTTAGGATTTGAGGACGAAGTTCCTAATTACTGTTGGCTCGAAAATTTGAGCAGTGAGATTGAATGGAATCGGAGTGAAGACGAGGTGGCGGCGTTGGGTGGATTGTTGGATCATAATACGGACGGAGCGGTGGAGATGCCGCCGTATCGATCGGAGACCATGTTCTGTTTATAG MNRADGEAYRFDDSTASDHVVHDSRGICRRFHEDLRPTKILRFDSAEFNFISPDFDDAPVDSVSSDAESIVSKQSGAIHSNDSGLDSFQPLPIREDLLKILDEADVSIDRELAIPDLDSVISSFEKEINVPVPAVQPELGYLLEASDDELGLPPAALKGEMEPVNFGGKYSGIAGMKGFLGFEDEVPNYCWLENLSSEIEWNRSEDEVAALGGLLDHNTDGAVEMPPYRSETMFCL Homology
BLAST of Cp4.1LG04g14030 vs. NCBI nr
Match: XP_023531746.1 (uncharacterized protein LOC111793909 [Cucurbita pepo subsp. pepo] >XP_023531747.1 uncharacterized protein LOC111793909 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 394 bits (1011), Expect = 4.92e-137 Identity = 198/199 (99.50%), Postives = 199/199 (100.00%), Query Frame = 0
BLAST of Cp4.1LG04g14030 vs. NCBI nr
Match: KAG6587646.1 (hypothetical protein SDJN03_16211, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 383 bits (983), Expect = 9.08e-133 Identity = 192/199 (96.48%), Postives = 196/199 (98.49%), Query Frame = 0
BLAST of Cp4.1LG04g14030 vs. NCBI nr
Match: KAG7021606.1 (hypothetical protein SDJN02_15332, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 381 bits (979), Expect = 3.69e-132 Identity = 191/199 (95.98%), Postives = 196/199 (98.49%), Query Frame = 0
BLAST of Cp4.1LG04g14030 vs. NCBI nr
Match: KAG6589552.1 (hypothetical protein SDJN03_14975, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 219 bits (558), Expect = 2.48e-68 Identity = 130/201 (64.68%), Postives = 143/201 (71.14%), Query Frame = 0
BLAST of Cp4.1LG04g14030 vs. NCBI nr
Match: XP_023516749.1 (uncharacterized protein LOC111780554 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 213 bits (541), Expect = 9.36e-66 Identity = 128/201 (63.68%), Postives = 141/201 (70.15%), Query Frame = 0
BLAST of Cp4.1LG04g14030 vs. ExPASy TrEMBL
Match: A0A6J1E5H5 (uncharacterized protein LOC111429674 OS=Cucurbita moschata OX=3662 GN=LOC111429674 PE=4 SV=1) HSP 1 Score: 204 bits (519), Expect = 8.30e-63 Identity = 123/201 (61.19%), Postives = 136/201 (67.66%), Query Frame = 0
BLAST of Cp4.1LG04g14030 vs. ExPASy TrEMBL
Match: A0A5D3DXI3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00410 PE=4 SV=1) HSP 1 Score: 177 bits (449), Expect = 5.05e-52 Identity = 105/156 (67.31%), Postives = 114/156 (73.08%), Query Frame = 0
BLAST of Cp4.1LG04g14030 vs. ExPASy TrEMBL
Match: A0A1S3BWV1 (uncharacterized protein LOC103494333 OS=Cucumis melo OX=3656 GN=LOC103494333 PE=4 SV=1) HSP 1 Score: 176 bits (446), Expect = 7.76e-52 Identity = 105/156 (67.31%), Postives = 113/156 (72.44%), Query Frame = 0
BLAST of Cp4.1LG04g14030 vs. ExPASy TrEMBL
Match: A0A5A7UZW3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34725G00010 PE=4 SV=1) HSP 1 Score: 176 bits (446), Expect = 1.43e-51 Identity = 105/156 (67.31%), Postives = 113/156 (72.44%), Query Frame = 0
BLAST of Cp4.1LG04g14030 vs. ExPASy TrEMBL
Match: A0A0A0LS21 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G022530 PE=4 SV=1) HSP 1 Score: 166 bits (420), Expect = 7.34e-48 Identity = 100/152 (65.79%), Postives = 111/152 (73.03%), Query Frame = 0
BLAST of Cp4.1LG04g14030 vs. TAIR 10
Match: AT1G13360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1); Has 69 Blast hits to 69 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 65.9 bits (159), Expect = 5.1e-11 Identity = 49/133 (36.84%), Postives = 67/133 (50.38%), Query Frame = 0
BLAST of Cp4.1LG04g14030 vs. TAIR 10
Match: AT1G13360.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). ) HSP 1 Score: 65.9 bits (159), Expect = 5.1e-11 Identity = 49/133 (36.84%), Postives = 67/133 (50.38%), Query Frame = 0
BLAST of Cp4.1LG04g14030 vs. TAIR 10
Match: AT1G13360.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). ) HSP 1 Score: 65.9 bits (159), Expect = 5.1e-11 Identity = 49/133 (36.84%), Postives = 67/133 (50.38%), Query Frame = 0
BLAST of Cp4.1LG04g14030 vs. TAIR 10
Match: AT3G25870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13360.1); Has 50 Blast hits to 50 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 53.1 bits (126), Expect = 3.4e-07 Identity = 33/76 (43.42%), Postives = 43/76 (56.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|