Homology
BLAST of Cp4.1LG04g13930 vs. ExPASy Swiss-Prot
Match:
Q9SY02 (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1)
HSP 1 Score: 227.3 bits (578), Expect = 1.4e-58
Identity = 109/173 (63.01%), Postives = 138/173 (79.77%), Query Frame = 0
Query: 1 MVTGYAQSGNIDQARILFDEMPQRDCISWAAMIAGYAQSSQSEEALQLFIMMKRNGERLN 60
M+TGYAQ G I +A+ LFD+MP+RD +SWAAMIAGY+QS S EAL+LF+ M+R G RLN
Sbjct: 349 MITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLN 408
Query: 61 RSALTCALSSCAEIAAFELGKQLHGRLIKAGFQTGYYVGNALLAMYSKCGSIEEALDIFE 120
RS+ + ALS+CA++ A ELGKQLHGRL+K G++TG +VGNALL MY KCGSIEEA D+F+
Sbjct: 409 RSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFK 468
Query: 121 DITDKDIVSWNTLIVGYARHGFGKEALAVFESMKMT-IKPDEVTLVWKFSKTS 173
++ KDIVSWNT+I GY+RHGFG+ AL FESMK +KPD+ T+V S S
Sbjct: 469 EMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACS 521
BLAST of Cp4.1LG04g13930 vs. ExPASy Swiss-Prot
Match:
Q56X05 (Pentatricopeptide repeat-containing protein At1g06143 OS=Arabidopsis thaliana OX=3702 GN=EMB1444 PE=2 SV=2)
HSP 1 Score: 147.9 bits (372), Expect = 1.1e-34
Identity = 69/170 (40.59%), Postives = 110/170 (64.71%), Query Frame = 0
Query: 1 MVTGYAQSGNIDQARILFDEMPQRDCISWAAMIAGYAQSSQSEEALQLFIMMKRNGERLN 60
++ GY GN++QA LF++MP +D ISW MI GY+Q+ + EA+ +F M G +
Sbjct: 227 LINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPD 286
Query: 61 RSALTCALSSCAEIAAFELGKQLHGRLIKAGFQTGYYVGNALLAMYSKCGSIEEALDIFE 120
++ +S+CA + E+GK++H ++ GF Y+G+AL+ MYSKCGS+E AL +F
Sbjct: 287 EVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFF 346
Query: 121 DITDKDIVSWNTLIVGYARHGFGKEALAVFESMKM-TIKPDEVTLVWKFS 170
++ K++ WN++I G A HGF +EAL +F M+M ++KP+ VT V F+
Sbjct: 347 NLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFT 396
BLAST of Cp4.1LG04g13930 vs. ExPASy Swiss-Prot
Match:
Q9FRI5 (Pentatricopeptide repeat-containing protein At1g25360 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H74 PE=2 SV=1)
HSP 1 Score: 145.6 bits (366), Expect = 5.3e-34
Identity = 71/166 (42.77%), Postives = 106/166 (63.86%), Query Frame = 0
Query: 1 MVTGYAQSGNIDQARILFDEMPQRDCISWAAMIAGYAQSSQSEEALQLFIMMKRNGERLN 60
+++GY SG+I +A+++F EM +++ +SW MI+G A++ EE L+LF MKR G
Sbjct: 357 LLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPC 416
Query: 61 RSALTCALSSCAEIAAFELGKQLHGRLIKAGFQTGYYVGNALLAMYSKCGSIEEALDIFE 120
A + A+ SCA + A+ G+Q H +L+K GF + GNAL+ MY+KCG +EEA +F
Sbjct: 417 DYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFR 476
Query: 121 DITDKDIVSWNTLIVGYARHGFGKEALAVFESM-KMTIKPDEVTLV 166
+ D VSWN LI +HG G EA+ V+E M K I+PD +TL+
Sbjct: 477 TMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLL 522
BLAST of Cp4.1LG04g13930 vs. ExPASy Swiss-Prot
Match:
Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)
HSP 1 Score: 144.4 bits (363), Expect = 1.2e-33
Identity = 69/172 (40.12%), Postives = 112/172 (65.12%), Query Frame = 0
Query: 1 MVTGYAQSGNIDQARILFDEMPQRDCISWAAMIAGYAQSSQSEEALQLFIMMKRNGERLN 60
M++GYA + + AR++F +M +R+ +SW A+IAGY Q+ ++EEAL LF ++KR
Sbjct: 326 MISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPT 385
Query: 61 RSALTCALSSCAEIAAFELGKQLHGRLIKAG--FQTG----YYVGNALLAMYSKCGSIEE 120
+ L +CA++A LG Q H ++K G FQ+G +VGN+L+ MY KCG +EE
Sbjct: 386 HYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEE 445
Query: 121 ALDIFEDITDKDIVSWNTLIVGYARHGFGKEALAVF-ESMKMTIKPDEVTLV 166
+F + ++D VSWN +I+G+A++G+G EAL +F E ++ KPD +T++
Sbjct: 446 GYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMI 497
BLAST of Cp4.1LG04g13930 vs. ExPASy Swiss-Prot
Match:
Q9SUH6 (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX=3702 GN=DYW9 PE=2 SV=1)
HSP 1 Score: 141.7 bits (356), Expect = 7.7e-33
Identity = 71/166 (42.77%), Postives = 105/166 (63.25%), Query Frame = 0
Query: 1 MVTGYAQSGNIDQARILFDEMPQRDCISWAAMIAGYAQSSQSEEALQLFIMMKRNGERLN 60
+ T Y++ I+ AR LFDE P++ SW AMI+GY Q+ +E+A+ LF M+++ N
Sbjct: 360 LTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPN 419
Query: 61 RSALTCALSSCAEIAAFELGKQLHGRLIKAGFQTGYYVGNALLAMYSKCGSIEEALDIFE 120
+TC LS+CA++ A LGK +H + F++ YV AL+ MY+KCGSI EA +F+
Sbjct: 420 PVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFD 479
Query: 121 DITDKDIVSWNTLIVGYARHGFGKEALAVF-ESMKMTIKPDEVTLV 166
+T K+ V+WNT+I GY HG G+EAL +F E + I P VT +
Sbjct: 480 LMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFL 525
BLAST of Cp4.1LG04g13930 vs. NCBI nr
Match:
KAG7021643.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 345 bits (886), Expect = 8.29e-115
Identity = 173/176 (98.30%), Postives = 174/176 (98.86%), Query Frame = 0
Query: 1 MVTGYAQSGNIDQARILFDEMPQRDCISWAAMIAGYAQSSQSEEALQLFIMMKRNGERLN 60
MVTGYAQSGNIDQARILFDEMPQRDCISWAAMIAGYAQSSQSEEALQLFIMMKRNGERLN
Sbjct: 345 MVTGYAQSGNIDQARILFDEMPQRDCISWAAMIAGYAQSSQSEEALQLFIMMKRNGERLN 404
Query: 61 RSALTCALSSCAEIAAFELGKQLHGRLIKAGFQTGYYVGNALLAMYSKCGSIEEALDIFE 120
RSAL CALSSCAEIAAFELGKQLHGRLIKAGFQTGYYVGNALLAMY KCGSIEEALDIFE
Sbjct: 405 RSALACALSSCAEIAAFELGKQLHGRLIKAGFQTGYYVGNALLAMYCKCGSIEEALDIFE 464
Query: 121 DITDKDIVSWNTLIVGYARHGFGKEALAVFESMKMTIKPDEVTLVWKFSKTSISVI 176
DITDKDIVSWNTLIVGYARHGFGKEALAVFESMKMTIKPDEVTLVWKFSKTSIS+I
Sbjct: 465 DITDKDIVSWNTLIVGYARHGFGKEALAVFESMKMTIKPDEVTLVWKFSKTSISII 520
BLAST of Cp4.1LG04g13930 vs. NCBI nr
Match:
XP_023530672.1 (pentatricopeptide repeat-containing protein At4g02750-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 330 bits (846), Expect = 7.09e-106
Identity = 167/172 (97.09%), Postives = 167/172 (97.09%), Query Frame = 0
Query: 1 MVTGYAQSGNIDQARILFDEMPQRDCISWAAMIAGYAQSSQSEEALQLFIMMKRNGERLN 60
MVTGYAQSGNIDQARILFDEMPQRDCISWAAMIAGYAQSSQSEEALQLFIMMKRNGERLN
Sbjct: 345 MVTGYAQSGNIDQARILFDEMPQRDCISWAAMIAGYAQSSQSEEALQLFIMMKRNGERLN 404
Query: 61 RSALTCALSSCAEIAAFELGKQLHGRLIKAGFQTGYYVGNALLAMYSKCGSIEEALDIFE 120
RSALTCALSSCAEIAAFELGKQLHGRLIKAGFQTGYYVGNALLAMYSKCGSIEEALDIFE
Sbjct: 405 RSALTCALSSCAEIAAFELGKQLHGRLIKAGFQTGYYVGNALLAMYSKCGSIEEALDIFE 464
Query: 121 DITDKDIVSWNTLIVGYARHGFGKEALAVFESMKMTIKPDEVTLVWKFSKTS 172
DITDKDIVSWNTLIVGYARHGFGKEALAVFESMKMTIKPDEVTLV S S
Sbjct: 465 DITDKDIVSWNTLIVGYARHGFGKEALAVFESMKMTIKPDEVTLVGVLSACS 516
BLAST of Cp4.1LG04g13930 vs. NCBI nr
Match:
XP_022933912.1 (pentatricopeptide repeat-containing protein At4g02750-like [Cucurbita moschata])
HSP 1 Score: 327 bits (838), Expect = 1.10e-104
Identity = 165/172 (95.93%), Postives = 166/172 (96.51%), Query Frame = 0
Query: 1 MVTGYAQSGNIDQARILFDEMPQRDCISWAAMIAGYAQSSQSEEALQLFIMMKRNGERLN 60
MVTGYAQSGNIDQARILFDEMPQRDCISWAAMIAGYAQSSQSEEALQLFIMM+RNGERLN
Sbjct: 345 MVTGYAQSGNIDQARILFDEMPQRDCISWAAMIAGYAQSSQSEEALQLFIMMRRNGERLN 404
Query: 61 RSALTCALSSCAEIAAFELGKQLHGRLIKAGFQTGYYVGNALLAMYSKCGSIEEALDIFE 120
RSALTCALSSCAEIAAFELGKQLHGRLIKAGFQTGYYVGNALLAMY KCGSIEEALDIFE
Sbjct: 405 RSALTCALSSCAEIAAFELGKQLHGRLIKAGFQTGYYVGNALLAMYCKCGSIEEALDIFE 464
Query: 121 DITDKDIVSWNTLIVGYARHGFGKEALAVFESMKMTIKPDEVTLVWKFSKTS 172
DITDKDIVSWNTLIVGYARHGFGKEALAVFESMKMTIKPDEVTLV S S
Sbjct: 465 DITDKDIVSWNTLIVGYARHGFGKEALAVFESMKMTIKPDEVTLVGVLSACS 516
BLAST of Cp4.1LG04g13930 vs. NCBI nr
Match:
KAG6587679.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 326 bits (836), Expect = 2.17e-104
Identity = 165/172 (95.93%), Postives = 165/172 (95.93%), Query Frame = 0
Query: 1 MVTGYAQSGNIDQARILFDEMPQRDCISWAAMIAGYAQSSQSEEALQLFIMMKRNGERLN 60
MVTGYAQSGNIDQARILFDEMPQRDCISWAAMIAGYAQSSQSEEALQLFIMMKRNGERLN
Sbjct: 345 MVTGYAQSGNIDQARILFDEMPQRDCISWAAMIAGYAQSSQSEEALQLFIMMKRNGERLN 404
Query: 61 RSALTCALSSCAEIAAFELGKQLHGRLIKAGFQTGYYVGNALLAMYSKCGSIEEALDIFE 120
RSAL CALSSCAEIAAFELGKQLHGRLIKAGFQTGYYVGNALLAMY KCGSIEEALDIFE
Sbjct: 405 RSALACALSSCAEIAAFELGKQLHGRLIKAGFQTGYYVGNALLAMYCKCGSIEEALDIFE 464
Query: 121 DITDKDIVSWNTLIVGYARHGFGKEALAVFESMKMTIKPDEVTLVWKFSKTS 172
DITDKDIVSWNTLIVGYARHGFGKEALAVFESMKMTIKPDEVTLV S S
Sbjct: 465 DITDKDIVSWNTLIVGYARHGFGKEALAVFESMKMTIKPDEVTLVGVLSACS 516
BLAST of Cp4.1LG04g13930 vs. NCBI nr
Match:
XP_023001422.1 (pentatricopeptide repeat-containing protein At4g02750-like [Cucurbita maxima])
HSP 1 Score: 321 bits (823), Expect = 1.86e-102
Identity = 161/172 (93.60%), Postives = 163/172 (94.77%), Query Frame = 0
Query: 1 MVTGYAQSGNIDQARILFDEMPQRDCISWAAMIAGYAQSSQSEEALQLFIMMKRNGERLN 60
MVTGYAQSGNIDQARILFDEMPQRDCISWAAMIAGYAQSSQSEEALQLFIMMKRNGERLN
Sbjct: 345 MVTGYAQSGNIDQARILFDEMPQRDCISWAAMIAGYAQSSQSEEALQLFIMMKRNGERLN 404
Query: 61 RSALTCALSSCAEIAAFELGKQLHGRLIKAGFQTGYYVGNALLAMYSKCGSIEEALDIFE 120
RSALTCAL SCAEIAAFELGKQLHGRLIKAGFQTGYYVGNALLAMY KCGSIEEA DIFE
Sbjct: 405 RSALTCALISCAEIAAFELGKQLHGRLIKAGFQTGYYVGNALLAMYCKCGSIEEAFDIFE 464
Query: 121 DITDKDIVSWNTLIVGYARHGFGKEALAVFESMKMTIKPDEVTLVWKFSKTS 172
DITDKDIVSWNTLI GYARHGFGKEALAVFE+MKMT+KPDEVTLV S S
Sbjct: 465 DITDKDIVSWNTLIAGYARHGFGKEALAVFETMKMTVKPDEVTLVGVLSACS 516
BLAST of Cp4.1LG04g13930 vs. ExPASy TrEMBL
Match:
A0A6J1F160 (pentatricopeptide repeat-containing protein At4g02750-like OS=Cucurbita moschata OX=3662 GN=LOC111441181 PE=3 SV=1)
HSP 1 Score: 327 bits (838), Expect = 5.31e-105
Identity = 165/172 (95.93%), Postives = 166/172 (96.51%), Query Frame = 0
Query: 1 MVTGYAQSGNIDQARILFDEMPQRDCISWAAMIAGYAQSSQSEEALQLFIMMKRNGERLN 60
MVTGYAQSGNIDQARILFDEMPQRDCISWAAMIAGYAQSSQSEEALQLFIMM+RNGERLN
Sbjct: 345 MVTGYAQSGNIDQARILFDEMPQRDCISWAAMIAGYAQSSQSEEALQLFIMMRRNGERLN 404
Query: 61 RSALTCALSSCAEIAAFELGKQLHGRLIKAGFQTGYYVGNALLAMYSKCGSIEEALDIFE 120
RSALTCALSSCAEIAAFELGKQLHGRLIKAGFQTGYYVGNALLAMY KCGSIEEALDIFE
Sbjct: 405 RSALTCALSSCAEIAAFELGKQLHGRLIKAGFQTGYYVGNALLAMYCKCGSIEEALDIFE 464
Query: 121 DITDKDIVSWNTLIVGYARHGFGKEALAVFESMKMTIKPDEVTLVWKFSKTS 172
DITDKDIVSWNTLIVGYARHGFGKEALAVFESMKMTIKPDEVTLV S S
Sbjct: 465 DITDKDIVSWNTLIVGYARHGFGKEALAVFESMKMTIKPDEVTLVGVLSACS 516
BLAST of Cp4.1LG04g13930 vs. ExPASy TrEMBL
Match:
A0A6J1KGH5 (pentatricopeptide repeat-containing protein At4g02750-like OS=Cucurbita maxima OX=3661 GN=LOC111495558 PE=3 SV=1)
HSP 1 Score: 321 bits (823), Expect = 8.99e-103
Identity = 161/172 (93.60%), Postives = 163/172 (94.77%), Query Frame = 0
Query: 1 MVTGYAQSGNIDQARILFDEMPQRDCISWAAMIAGYAQSSQSEEALQLFIMMKRNGERLN 60
MVTGYAQSGNIDQARILFDEMPQRDCISWAAMIAGYAQSSQSEEALQLFIMMKRNGERLN
Sbjct: 345 MVTGYAQSGNIDQARILFDEMPQRDCISWAAMIAGYAQSSQSEEALQLFIMMKRNGERLN 404
Query: 61 RSALTCALSSCAEIAAFELGKQLHGRLIKAGFQTGYYVGNALLAMYSKCGSIEEALDIFE 120
RSALTCAL SCAEIAAFELGKQLHGRLIKAGFQTGYYVGNALLAMY KCGSIEEA DIFE
Sbjct: 405 RSALTCALISCAEIAAFELGKQLHGRLIKAGFQTGYYVGNALLAMYCKCGSIEEAFDIFE 464
Query: 121 DITDKDIVSWNTLIVGYARHGFGKEALAVFESMKMTIKPDEVTLVWKFSKTS 172
DITDKDIVSWNTLI GYARHGFGKEALAVFE+MKMT+KPDEVTLV S S
Sbjct: 465 DITDKDIVSWNTLIAGYARHGFGKEALAVFETMKMTVKPDEVTLVGVLSACS 516
BLAST of Cp4.1LG04g13930 vs. ExPASy TrEMBL
Match:
A0A6J1BZX3 (pentatricopeptide repeat-containing protein At4g02750-like OS=Momordica charantia OX=3673 GN=LOC111007017 PE=3 SV=1)
HSP 1 Score: 309 bits (792), Expect = 3.56e-98
Identity = 152/172 (88.37%), Postives = 161/172 (93.60%), Query Frame = 0
Query: 1 MVTGYAQSGNIDQARILFDEMPQRDCISWAAMIAGYAQSSQSEEALQLFIMMKRNGERLN 60
MVTGYAQ+GNIDQARILFDEMPQRDCISWAAMIAGYAQS QSEEALQLFIMMKR+G + N
Sbjct: 345 MVTGYAQTGNIDQARILFDEMPQRDCISWAAMIAGYAQSGQSEEALQLFIMMKRDGGKFN 404
Query: 61 RSALTCALSSCAEIAAFELGKQLHGRLIKAGFQTGYYVGNALLAMYSKCGSIEEALDIFE 120
RSALTCALSSCAEIAAFELGKQLHGRL+KAGFQTGYYVGNALLAMY KCGSIEEA D+FE
Sbjct: 405 RSALTCALSSCAEIAAFELGKQLHGRLVKAGFQTGYYVGNALLAMYCKCGSIEEAFDVFE 464
Query: 121 DITDKDIVSWNTLIVGYARHGFGKEALAVFESMKMTIKPDEVTLVWKFSKTS 172
DIT+KDIVSWNT+I GYARHGFGKEALAVFESMK+TIKPD+VTLV S S
Sbjct: 465 DITEKDIVSWNTMIAGYARHGFGKEALAVFESMKVTIKPDDVTLVGVLSACS 516
BLAST of Cp4.1LG04g13930 vs. ExPASy TrEMBL
Match:
A0A0A0LV20 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G024980 PE=3 SV=1)
HSP 1 Score: 293 bits (751), Expect = 4.13e-92
Identity = 145/172 (84.30%), Postives = 154/172 (89.53%), Query Frame = 0
Query: 1 MVTGYAQSGNIDQARILFDEMPQRDCISWAAMIAGYAQSSQSEEALQLFIMMKRNGERLN 60
MVTGYAQ GNIDQA+ILFDEMPQRDCISWAAMI+GYAQS QSEEAL LFI MKR+G LN
Sbjct: 345 MVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILN 404
Query: 61 RSALTCALSSCAEIAAFELGKQLHGRLIKAGFQTGYYVGNALLAMYSKCGSIEEALDIFE 120
RSAL CALSSCAEIAA ELGKQLHGRL+KAGFQTGY GNALLAMY KCGSIEEA D+FE
Sbjct: 405 RSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFE 464
Query: 121 DITDKDIVSWNTLIVGYARHGFGKEALAVFESMKMTIKPDEVTLVWKFSKTS 172
DIT+KDIVSWNT+I GYARHGFGKEALA+FESMKMTIKPD+VTLV S S
Sbjct: 465 DITEKDIVSWNTMIAGYARHGFGKEALALFESMKMTIKPDDVTLVGVLSACS 516
BLAST of Cp4.1LG04g13930 vs. ExPASy TrEMBL
Match:
A0A5A7UX79 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G001170 PE=3 SV=1)
HSP 1 Score: 290 bits (742), Expect = 6.50e-91
Identity = 144/172 (83.72%), Postives = 154/172 (89.53%), Query Frame = 0
Query: 1 MVTGYAQSGNIDQARILFDEMPQRDCISWAAMIAGYAQSSQSEEALQLFIMMKRNGERLN 60
MVTGYAQ GNIDQA+ILFDEMPQRDCISWAAMI+GYAQS QSEEAL LFI MKR+G LN
Sbjct: 345 MVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIEMKRDGGILN 404
Query: 61 RSALTCALSSCAEIAAFELGKQLHGRLIKAGFQTGYYVGNALLAMYSKCGSIEEALDIFE 120
RSAL ALSSCAEIAA ELGKQLHGRL+KAGF+TGYY GNALLAMY KCGSIEEA D+FE
Sbjct: 405 RSALVGALSSCAEIAALELGKQLHGRLVKAGFETGYYAGNALLAMYCKCGSIEEAFDVFE 464
Query: 121 DITDKDIVSWNTLIVGYARHGFGKEALAVFESMKMTIKPDEVTLVWKFSKTS 172
DIT+KDIVSWNT+I GYARHGFGKEALA+FESMKMTIKPD+VTLV S S
Sbjct: 465 DITEKDIVSWNTMIAGYARHGFGKEALALFESMKMTIKPDDVTLVGVLSACS 516
BLAST of Cp4.1LG04g13930 vs. TAIR 10
Match:
AT4G02750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 227.3 bits (578), Expect = 9.9e-60
Identity = 109/173 (63.01%), Postives = 138/173 (79.77%), Query Frame = 0
Query: 1 MVTGYAQSGNIDQARILFDEMPQRDCISWAAMIAGYAQSSQSEEALQLFIMMKRNGERLN 60
M+TGYAQ G I +A+ LFD+MP+RD +SWAAMIAGY+QS S EAL+LF+ M+R G RLN
Sbjct: 349 MITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLN 408
Query: 61 RSALTCALSSCAEIAAFELGKQLHGRLIKAGFQTGYYVGNALLAMYSKCGSIEEALDIFE 120
RS+ + ALS+CA++ A ELGKQLHGRL+K G++TG +VGNALL MY KCGSIEEA D+F+
Sbjct: 409 RSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFK 468
Query: 121 DITDKDIVSWNTLIVGYARHGFGKEALAVFESMKMT-IKPDEVTLVWKFSKTS 173
++ KDIVSWNT+I GY+RHGFG+ AL FESMK +KPD+ T+V S S
Sbjct: 469 EMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACS 521
BLAST of Cp4.1LG04g13930 vs. TAIR 10
Match:
AT1G06150.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )
HSP 1 Score: 147.9 bits (372), Expect = 7.6e-36
Identity = 69/170 (40.59%), Postives = 110/170 (64.71%), Query Frame = 0
Query: 1 MVTGYAQSGNIDQARILFDEMPQRDCISWAAMIAGYAQSSQSEEALQLFIMMKRNGERLN 60
++ GY GN++QA LF++MP +D ISW MI GY+Q+ + EA+ +F M G +
Sbjct: 972 LINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPD 1031
Query: 61 RSALTCALSSCAEIAAFELGKQLHGRLIKAGFQTGYYVGNALLAMYSKCGSIEEALDIFE 120
++ +S+CA + E+GK++H ++ GF Y+G+AL+ MYSKCGS+E AL +F
Sbjct: 1032 EVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFF 1091
Query: 121 DITDKDIVSWNTLIVGYARHGFGKEALAVFESMKM-TIKPDEVTLVWKFS 170
++ K++ WN++I G A HGF +EAL +F M+M ++KP+ VT V F+
Sbjct: 1092 NLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFT 1141
BLAST of Cp4.1LG04g13930 vs. TAIR 10
Match:
AT1G25360.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 145.6 bits (366), Expect = 3.8e-35
Identity = 71/166 (42.77%), Postives = 106/166 (63.86%), Query Frame = 0
Query: 1 MVTGYAQSGNIDQARILFDEMPQRDCISWAAMIAGYAQSSQSEEALQLFIMMKRNGERLN 60
+++GY SG+I +A+++F EM +++ +SW MI+G A++ EE L+LF MKR G
Sbjct: 357 LLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPC 416
Query: 61 RSALTCALSSCAEIAAFELGKQLHGRLIKAGFQTGYYVGNALLAMYSKCGSIEEALDIFE 120
A + A+ SCA + A+ G+Q H +L+K GF + GNAL+ MY+KCG +EEA +F
Sbjct: 417 DYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFR 476
Query: 121 DITDKDIVSWNTLIVGYARHGFGKEALAVFESM-KMTIKPDEVTLV 166
+ D VSWN LI +HG G EA+ V+E M K I+PD +TL+
Sbjct: 477 TMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLL 522
BLAST of Cp4.1LG04g13930 vs. TAIR 10
Match:
AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 144.4 bits (363), Expect = 8.5e-35
Identity = 69/172 (40.12%), Postives = 112/172 (65.12%), Query Frame = 0
Query: 1 MVTGYAQSGNIDQARILFDEMPQRDCISWAAMIAGYAQSSQSEEALQLFIMMKRNGERLN 60
M++GYA + + AR++F +M +R+ +SW A+IAGY Q+ ++EEAL LF ++KR
Sbjct: 326 MISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPT 385
Query: 61 RSALTCALSSCAEIAAFELGKQLHGRLIKAG--FQTG----YYVGNALLAMYSKCGSIEE 120
+ L +CA++A LG Q H ++K G FQ+G +VGN+L+ MY KCG +EE
Sbjct: 386 HYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEE 445
Query: 121 ALDIFEDITDKDIVSWNTLIVGYARHGFGKEALAVF-ESMKMTIKPDEVTLV 166
+F + ++D VSWN +I+G+A++G+G EAL +F E ++ KPD +T++
Sbjct: 446 GYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMI 497
BLAST of Cp4.1LG04g13930 vs. TAIR 10
Match:
AT4G30700.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 141.7 bits (356), Expect = 5.5e-34
Identity = 71/166 (42.77%), Postives = 105/166 (63.25%), Query Frame = 0
Query: 1 MVTGYAQSGNIDQARILFDEMPQRDCISWAAMIAGYAQSSQSEEALQLFIMMKRNGERLN 60
+ T Y++ I+ AR LFDE P++ SW AMI+GY Q+ +E+A+ LF M+++ N
Sbjct: 360 LTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPN 419
Query: 61 RSALTCALSSCAEIAAFELGKQLHGRLIKAGFQTGYYVGNALLAMYSKCGSIEEALDIFE 120
+TC LS+CA++ A LGK +H + F++ YV AL+ MY+KCGSI EA +F+
Sbjct: 420 PVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFD 479
Query: 121 DITDKDIVSWNTLIVGYARHGFGKEALAVF-ESMKMTIKPDEVTLV 166
+T K+ V+WNT+I GY HG G+EAL +F E + I P VT +
Sbjct: 480 LMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFL 525
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9SY02 | 1.4e-58 | 63.01 | Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX... | [more] |
Q56X05 | 1.1e-34 | 40.59 | Pentatricopeptide repeat-containing protein At1g06143 OS=Arabidopsis thaliana OX... | [more] |
Q9FRI5 | 5.3e-34 | 42.77 | Pentatricopeptide repeat-containing protein At1g25360 OS=Arabidopsis thaliana OX... | [more] |
Q9SIT7 | 1.2e-33 | 40.12 | Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX... | [more] |
Q9SUH6 | 7.7e-33 | 42.77 | Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
KAG7021643.1 | 8.29e-115 | 98.30 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_023530672.1 | 7.09e-106 | 97.09 | pentatricopeptide repeat-containing protein At4g02750-like [Cucurbita pepo subsp... | [more] |
XP_022933912.1 | 1.10e-104 | 95.93 | pentatricopeptide repeat-containing protein At4g02750-like [Cucurbita moschata] | [more] |
KAG6587679.1 | 2.17e-104 | 95.93 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_023001422.1 | 1.86e-102 | 93.60 | pentatricopeptide repeat-containing protein At4g02750-like [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1F160 | 5.31e-105 | 95.93 | pentatricopeptide repeat-containing protein At4g02750-like OS=Cucurbita moschata... | [more] |
A0A6J1KGH5 | 8.99e-103 | 93.60 | pentatricopeptide repeat-containing protein At4g02750-like OS=Cucurbita maxima O... | [more] |
A0A6J1BZX3 | 3.56e-98 | 88.37 | pentatricopeptide repeat-containing protein At4g02750-like OS=Momordica charanti... | [more] |
A0A0A0LV20 | 4.13e-92 | 84.30 | DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G0249... | [more] |
A0A5A7UX79 | 6.50e-91 | 83.72 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
Match Name | E-value | Identity | Description | |
AT4G02750.1 | 9.9e-60 | 63.01 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G06150.1 | 7.6e-36 | 40.59 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | [more] |
AT1G25360.1 | 3.8e-35 | 42.77 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT2G13600.1 | 8.5e-35 | 40.12 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G30700.1 | 5.5e-34 | 42.77 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |