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Cp4.1LG04g13880 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGGATTCAGAAACTCAGCCATGGAACAATTCTTCATCTCATAGTCCTATCAATTTGAGTAACGGAAAAAAAAAAATGAAGTCAAAAGCCAAAATCCAATGTGTTAATTGTTTACTCACAGAAGCAAATTCATGGCCAGGAAGAGTCTCGCCGATCTGCATCATCGCTGAGCCCAAATTGCACGGTGGTCTCTGCTGCAATAGTTCACCAACCTCCCCTGCCTTCGCCATCGCGGTAGACTGATCCTCCGCAGTGACAAAAGGCAAAATCGGCGCCTCACCCCATCCGACGCACCCATTACTCAACTCGATCCTTATCGCTACGTTCTCCACCATTTCAAGCCTCGAAGACGCAATCGTAAACGGCTCAAACAATGGAACATTCAGTGCCCTACTTTCTGCTCTCTGCACATTCACTGTGAACGTTTCCATCAAATTCTTGAACCCGAAGCTCATTCCTGACTCGAACGGTACTGTCGCCACCTTCATTTTCACACACAGCAGCGAAATGCGTATAGATGATTTCTCCTTCCGGTTGCTTCGAAAGTCGAATAATGGACAGTATCTGGACGCAGTATCGGATTCCAATTGCATAAAGAACCCAGTGGAACTCATGAGAATGTTCTGAAGGGGATTTGAATGGTGAATTTGGGGACTTTGATAGCCGTCGCTGTTCAACGACTGGATCGCGACGGAGTAAGCAACGAACCGGCTTTCTCATTGTCGCTTATGGGCAAACAAATCGCAGTAACAATTCATTTCTCGCTCCAATTTTTTAAATTACTTATTTTAGAACTAATTTTTTTTAGGAAGCTTAATTGTTGATTAAACATAAGAATAAGCTTAAAATTTTCCTTATCCAAAAAAAGATTAAATCTTTGTTATGTTTGGAATAGCGCGGTAGCATTTTGGCTTTGAAAGCCGGCAAAATCCTCACCCTCCGAAATGAGAACAACCATAAACCCTAGAGGACAGCCATGAAATGGACTCTATTGAGAAACCTTTCTCTCAGAGCTCGGAACCATCCATCTTCTTTATTCTCATACTTACAAGCCCAATGCCTTTCCTCCATGCTTGGTTTCATCCCCAGCCAGGTCTCGATTCAGGCTCTTCTCGTCCGGCAACGATTCGCCGTCGAAGGAAGATTCTGTAAGTGCTCCCGAAGCGAATTTGCTGCCGGTTCAGAAGAAAGGCGTATGTTTGGACGTACAAGATGTGAGCAACAAAGGTGTTTATTATTATTTTTTTTTTTCCAAATCCGAACGTTCTACTTTCCTATTGATTTCTGCGATTGAACTTAGGACTACGAAATTGATAATCCATCTTTGTATGATGTGAAATTTTGTAGGTTTTGTTCGTAGTTAGGGAAATGCTGGAAATCAATCACTTTTTTGGCTGATTTGTCTTCATGATCTAATGCTTCGCATTGAGATTGGGTGAAATTTTGAATTTACGTTTTTTTTTCTTACTGCAATTGATGTCTTGAGCGATGATCTCTGGATCTAACGTTGCTGCCGCGGTATTTGGATTTTTTTCAATGCGACTATATCATGAATCATGGGAGCTCAAAATTGTAATATTTTCCATTTGATGACCCATAAAATTTCTGCCCAGAATTGAAAATGAAGATAGACAAGTACTTCAAAGGTGATGAGGAGGCGCTACCATCAATTCTTGAAGCTATTCTTCAGAGGAAATTGGGTGGAAAGCATGAGGATACAGATGATGAACTTGATGAAGAACTACGAATGCAACCATGGGATGATGTGAAGGACAAAGAGTTTGAATCTGATTTTGAAGAATTGTAGGAGACAGACGAAGAGATTGATGATCTTTACAATGCTAGGGATATAGTTATGAAAAAAATGGTAAAGGATGAATACTTCAACATGGATGACAAAAAATGGGATGAGCTTGTTGAGGATGGCATTAAGCATGGGATCCTGAGGGACACCAAGGAGTGTGAACAGATTTTGGAGGACATGCTTAGTTGGGACAAGCTCCTTCCAGGTTTGCCCCTTGTCTTTACATGCTTGCTTTGTCCGTTCTCGTGTTACAATTGGCTTATTTATTCTTTCTGGACTAATTTTTTTGCGAGAGGCGCATCTGCCCCGTTGCTCTGCTCATGAATTCGGTGGGTATGGTAAAAAAACTAATGAAACGAAACTGCTGATGGATACCCTTAACCTCGAATTCTAGAAACATTATGATATCGTTTGAGCCATGTATGATGTATCTATCGCGTACTTAATATAAGTGATCCTTGGTTGGTATGTTGTCAGACAAATGTCTGTTTGTAATGTCATAGATTGCTTCACTTTCTATGAGATCCCGCATCGGTTGGGGAGGAGAACGAAGCATTCTTTATAAGAGTGTGGAAACCTCTCCCTAGTAGATGAGTTTTAAAACCTTGAGGGGAAGTCCGGAAGGGAAAGTCCAAAGCGGACAATATCCGCTAGCGGTAGACTTGGGCTCTTACACTTAAGATATAAACACTCAATTATATTGTGTAATATCTTGAGTAAATTCTCTTTGAATAATATTTTTTCCCCTGTTTCTTGGTAATGAACTGTTCACTAGATGATACGAAGAAAAAATTAGAAGCAAAATACAACGAGCTAGGGGATTTGTGTGAAAAAGGGGAGCTTGAACCTGAAGAAGCTTACAATCAGTTTAAACAATTCGGAGATCAGATGGTGATGGAATATGGAAAGATGATGGAGGCAGAAGGTCCCCCCAAGTTTGATGAAACAGATGTGGCAGATAACAAAAAAGACTTGGATGAGCCGCCAGGTGAAGGGCCAATTCTTAGGTGGCAAACAAGGGTTGTGTTTGAACCAGGCGGGGATGCATGGCATCCCAAAAACCGAAAAGTGAAATGATCTGTTACTGTGAAGGAGCTTGGTTTATCAAACTACCAATTCTGTCGACTAAGGGAATTGGTTGGCAAGCGTTATCATCCTGGAAAGATGAGCTTATCATCACTAGTCAGAGGTAATTTCAACTATACTATATTCTAATGTTTAATTCGGTTGATACTTCTCCTAGAACTGCTACGGTCTGTGTATCAACCCAAACCCTCCACTAGTAGATATTGTCCTCTTTGGGCTCTTTCGAACTTCTCTTCAAGTTTTTTAGAACTCATCTGTTACAGATAGGTTTCACACTATACAAAAATTGTTCCGTTTTTCTCTCCAATCGACGTAGGATCTCACCACCAATGTTGGCTGTTATAGTATCTTACTTTGACACATCTGAGTAGGCAAGCACATGTCACTGACAAATCGAACAGGACAGATCACCACACCTTGTACTCGTTTATTCATTCCGTCGACTATAAAAAATTCATTATGGTTCCTCTCTCTTCATTTTCTGCATGTGAGGTCGAAAAACAGTTTTACTTCTCTCTCTCTCTCTGTCAAGAAAGGCATATTGACCATGAACCTCTCTCAGATCTTGCTGAACTGGCGCTGTCTTTGTTTAAATTTGTATTAGCTTCTGACTTCAATTGTATTTCTCAGGTTTGAACACAGAGAGGAAAATAGAAAGGATTGCCTTGGGACACTTTTTTCTCTAATTGAGGAAGCTGGGAAAACCAACAAACTTGTAGAGGATGCTCGAACTTCATATGTGAAGGAGAGGCTGCGTGTGAATCCCCAGTTTATGGAGAGGCTGCGTGCTAAGAAAATGGGCTTGCAACCATCATACCCTTAATCTGCTTCATTGTTTGATTCGTGATGCTGTTGAAAAGAAGAATACACATTTGGCTCAACACTTTTGGTGAAGAAGTATTTTTTTCATTGGTCTTTACAAAAAAGTTACAAAATTCTAGAACATGTCCATCAATTTTGATTTTGTCATCAATAGCGATGTTTTGACCACTTGGAACTATCTTTACGACTATAGGAACTAGGAATTAATAATGTATCTTAATTATGTACTTTTCTATTGTGCTTTTTCATGAACATATATGGAAATTCTAAATGAATGAGAGGTTCCCAAGAGAGGAATACAAATCTCCAAAACTCCGATCCTTTC TGGATTCAGAAACTCAGCCATGGAACAATTCTTCATCTCATAGTCCTATCAATTTGAGTAACGGAAAAAAAAAAATGAAGTCAAAAGCCAAAATCCAATGTGTTAATTGTTTACTCACAGAAGCAAATTCATGGCCAGGAAGAGTCTCGCCGATCTGCATCATCGCTGAGCCCAAATTGCACGGTGGTCTCTGCTGCAATAGTTCACCAACCTCCCCTGCCTTCGCCATCGCGGTAGACTGATCCTCCGCAGTGACAAAAGGCAAAATCGGCGCCTCACCCCATCCGACGCACCCATTACTCAACTCGATCCTTATCGCTACGTTCTCCACCATTTCAAGCCTCGAAGACGCAATCGTAAACGGCTCAAACAATGGAACATTCAGTGCCCTACTTTCTGCTCTCTGCACATTCACTGTGAACGTTTCCATCAAATTCTTGAACCCGAAGCTCATTCCTGACTCGAACGGTACTGTCGCCACCTTCATTTTCACACACAGCAGCGAAATGCGTATAGATGATTTCTCCTTCCGGTTGCTTCGAAAGTCGAATAATGGACAGTATCTGGACGCAGTATCGGATTCCAATTGCATAAAGAACCCAGTGGAACTCATGAGAATGTTCTGAAGGGGATTTGAATGGTGAATTTGGGGACTTTGATAGCCGTCGCTGTTCAACGACTGGATCGCGACGGAGTAAGCAACGAACCGGCTTTCTCATTGTCGCTTATGGGCAAACAAATCGCAGTAACAATTCATTTCTCGCTCCAATTTTTTAAATTACTTATTTTAGAACTAATTTTTTTTAGGAAGCTTAATTGTTGATTAAACATAAGAATAAGCTTAAAATTTTCCTTATCCAAAAAAAGATTAAATCTTTGTTATGTTTGGAATAGCGCGGTAGCATTTTGGCTTTGAAAGCCGGCAAAATCCTCACCCTCCGAAATGAGAACAACCATAAACCCTAGAGGACAGCCATGAAATGGACTCTATTGAGAAACCTTTCTCTCAGAGCTCGGAACCATCCATCTTCTTTATTCTCATACTTACAAGCCCAATGCCTTTCCTCCATGCTTGGTTTCATCCCCAGCCAGGTCTCGATTCAGGCTCTTCTCGTCCGGCAACGATTCGCCGTCGAAGGAAGATTCTGTAAGTGCTCCCGAAGCGAATTTGCTGCCGGTTCAGAAGAAAGGCGTATGTTTGGACGTACAAGATGTGAGCAACAAAGGTTTTGTTCGTAGTTAGGGAAATGCTGGAAATCAATCACTTTTTTGGCTGATTTGTCTTCATGATCTAATGCTTCGCATTGAGATTGGGTGAAATTTTGAATTTACGTTTTTTTTTCTTACTGCAATTGATGTCTTGAGCGATGATCTCTGGATCTAACGTTGCTGCCGCGGTATTTGGATTTTTTTCAATGCGACTATATCATGAATCATGGGAGCTCAAAATTGTAATATTTTCCATTTGATGACCCATAAAATTTCTGCCCAGAATTGAAAATGAAGATAGACAAGTACTTCAAAGGTGATGAGGAGGCGCTACCATCAATTCTTGAAGCTATTCTTCAGAGGAAATTGGGTGGAAAGCATGAGGATACAGATGATGAACTTGATGAAGAACTACGAATGCAACCATGGGATGATGTGAAGGACAAAGAGTTTGAATCTGATTTTGAAGAATTGTAGGAGACAGACGAAGAGATTGATGATCTTTACAATGCTAGGGATATAGTTATGAAAAAAATGGTAAAGGATGAATACTTCAACATGGATGACAAAAAATGGGATGAGCTTGTTGAGGATGGCATTAAGCATGGGATCCTGAGGGACACCAAGGAGTGTGAACAGATTTTGGAGGACATGCTTAGTTGGGACAAGCTCCTTCCAGATGATACGAAGAAAAAATTAGAAGCAAAATACAACGAGCTAGGGGATTTGTGTGAAAAAGGGGAGCTTGAACCTGAAGAAGCTTACAATCAGTTTAAACAATTCGGAGATCAGATGGTGATGGAATATGGAAAGATGATGGAGGCAGAAGGTCCCCCCAAGTTTGATGAAACAGATGTGGCAGATAACAAAAAAGACTTGGATGAGCCGCCAGGAGCTTGGTTTATCAAACTACCAATTCTGTCGACTAAGGGAATTGGTTGGCAAGCGTTATCATCCTGGAAAGATGAGCTTATCATCACTAGTCAGAGGTTTGAACACAGAGAGGAAAATAGAAAGGATTGCCTTGGGACACTTTTTTCTCTAATTGAGGAAGCTGGGAAAACCAACAAACTTGTAGAGGATGCTCGAACTTCATATGTGAAGGAGAGGCTGCGTGTGAATCCCCAGTTTATGGAGAGGCTGCGTGCTAAGAAAATGGGCTTGCAACCATCATACCCTTAATCTGCTTCATTGTTTGATTCGTGATGCTGTTGAAAAGAAGAATACACATTTGGCTCAACACTTTTGGTGAAGAAGTATTTTTTTCATTGGTCTTTACAAAAAAGTTACAAAATTCTAGAACATGTCCATCAATTTTGATTTTGTCATCAATAGCGATGTTTTGACCACTTGGAACTATCTTTACGACTATAGGAACTAGGAATTAATAATGTATCTTAATTATGTACTTTTCTATTGTGCTTTTTCATGAACATATATGGAAATTCTAAATGAATGAGAGGTTCCCAAGAGAGGAATACAAATCTCCAAAACTCCGATCCTTTC ATGAAAAAAATGGTAAAGGATGAATACTTCAACATGGATGACAAAAAATGGGATGAGCTTGTTGAGGATGGCATTAAGCATGGGATCCTGAGGGACACCAAGGAGTGTGAACAGATTTTGGAGGACATGCTTAGTTGGGACAAGCTCCTTCCAGATGATACGAAGAAAAAATTAGAAGCAAAATACAACGAGCTAGGGGATTTGTGTGAAAAAGGGGAGCTTGAACCTGAAGAAGCTTACAATCAGTTTAAACAATTCGGAGATCAGATGGTGATGGAATATGGAAAGATGATGGAGGCAGAAGGTCCCCCCAAGTTTGATGAAACAGATGTGGCAGATAACAAAAAAGACTTGGATGAGCCGCCAGGAGCTTGGTTTATCAAACTACCAATTCTGTCGACTAAGGGAATTGGTTGGCAAGCGTTATCATCCTGGAAAGATGAGCTTATCATCACTAGTCAGAGGTTTGAACACAGAGAGGAAAATAGAAAGGATTGCCTTGGGACACTTTTTTCTCTAATTGAGGAAGCTGGGAAAACCAACAAACTTGTAGAGGATGCTCGAACTTCATATGTGAAGGAGAGGCTGCGTGTGAATCCCCAGTTTATGGAGAGGCTGCGTGCTAAGAAAATGGGCTTGCAACCATCATACCCTTAA MKKMVKDEYFNMDDKKWDELVEDGIKHGILRDTKECEQILEDMLSWDKLLPDDTKKKLEAKYNELGDLCEKGELEPEEAYNQFKQFGDQMVMEYGKMMEAEGPPKFDETDVADNKKDLDEPPGAWFIKLPILSTKGIGWQALSSWKDELIITSQRFEHREENRKDCLGTLFSLIEEAGKTNKLVEDARTSYVKERLRVNPQFMERLRAKKMGLQPSYP Homology
BLAST of Cp4.1LG04g13880 vs. NCBI nr
Match: XP_022933107.1 (uncharacterized protein LOC111439871 [Cucurbita moschata] >XP_022933111.1 uncharacterized protein LOC111439871 [Cucurbita moschata] >XP_022933119.1 uncharacterized protein LOC111439871 [Cucurbita moschata]) HSP 1 Score: 343 bits (880), Expect = 9.29e-116 Identity = 190/258 (73.64%), Postives = 202/258 (78.29%), Query Frame = 0
BLAST of Cp4.1LG04g13880 vs. NCBI nr
Match: KAG6587663.1 (hypothetical protein SDJN03_16228, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 335 bits (858), Expect = 1.51e-112 Identity = 180/230 (78.26%), Postives = 189/230 (82.17%), Query Frame = 0
BLAST of Cp4.1LG04g13880 vs. NCBI nr
Match: KAG7023307.1 (hypothetical protein SDJN02_14332, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 335 bits (859), Expect = 1.59e-112 Identity = 181/252 (71.83%), Postives = 194/252 (76.98%), Query Frame = 0
BLAST of Cp4.1LG04g13880 vs. NCBI nr
Match: XP_022921942.1 (uncharacterized protein LOC111430048 [Cucurbita moschata]) HSP 1 Score: 335 bits (859), Expect = 2.53e-111 Identity = 181/252 (71.83%), Postives = 194/252 (76.98%), Query Frame = 0
BLAST of Cp4.1LG04g13880 vs. NCBI nr
Match: KAG6589616.1 (hypothetical protein SDJN03_15039, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 333 bits (854), Expect = 1.45e-110 Identity = 180/252 (71.43%), Postives = 194/252 (76.98%), Query Frame = 0
BLAST of Cp4.1LG04g13880 vs. ExPASy TrEMBL
Match: A0A6J1EY83 (uncharacterized protein LOC111439871 OS=Cucurbita moschata OX=3662 GN=LOC111439871 PE=4 SV=1) HSP 1 Score: 343 bits (880), Expect = 4.50e-116 Identity = 190/258 (73.64%), Postives = 202/258 (78.29%), Query Frame = 0
BLAST of Cp4.1LG04g13880 vs. ExPASy TrEMBL
Match: A0A6J1E1S5 (uncharacterized protein LOC111430048 OS=Cucurbita moschata OX=3662 GN=LOC111430048 PE=4 SV=1) HSP 1 Score: 335 bits (859), Expect = 1.23e-111 Identity = 181/252 (71.83%), Postives = 194/252 (76.98%), Query Frame = 0
BLAST of Cp4.1LG04g13880 vs. ExPASy TrEMBL
Match: A0A6J1JL06 (uncharacterized protein LOC111485553 OS=Cucurbita maxima OX=3661 GN=LOC111485553 PE=4 SV=1) HSP 1 Score: 332 bits (850), Expect = 2.83e-110 Identity = 179/252 (71.03%), Postives = 193/252 (76.59%), Query Frame = 0
BLAST of Cp4.1LG04g13880 vs. ExPASy TrEMBL
Match: A0A6J1C1G2 (uncharacterized protein LOC111007394 OS=Momordica charantia OX=3673 GN=LOC111007394 PE=4 SV=1) HSP 1 Score: 329 bits (844), Expect = 2.22e-109 Identity = 177/254 (69.69%), Postives = 192/254 (75.59%), Query Frame = 0
BLAST of Cp4.1LG04g13880 vs. ExPASy TrEMBL
Match: A0A0D2TS37 (MRP-S28 domain-containing protein (Fragment) OS=Gossypium raimondii OX=29730 GN=B456_013G1693002 PE=4 SV=1) HSP 1 Score: 298 bits (764), Expect = 1.48e-99 Identity = 152/226 (67.26%), Postives = 181/226 (80.09%), Query Frame = 0
BLAST of Cp4.1LG04g13880 vs. TAIR 10
Match: AT3G18240.1 (Ribosomal protein S24/S35, mitochondrial ) HSP 1 Score: 267.7 bits (683), Expect = 8.2e-72 Identity = 137/244 (56.15%), Postives = 171/244 (70.08%), Query Frame = 0
BLAST of Cp4.1LG04g13880 vs. TAIR 10
Match: AT3G18240.2 (Ribosomal protein S24/S35, mitochondrial ) HSP 1 Score: 267.7 bits (683), Expect = 8.2e-72 Identity = 137/244 (56.15%), Postives = 171/244 (70.08%), Query Frame = 0
BLAST of Cp4.1LG04g13880 vs. TAIR 10
Match: AT4G21460.1 (Ribosomal protein S24/S35, mitochondrial ) HSP 1 Score: 256.9 bits (655), Expect = 1.4e-68 Identity = 132/244 (54.10%), Postives = 167/244 (68.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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