Cp4.1LG04g13840 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG04g13840
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Microbial collagenase
Location	Cp4.1LG04: 11202920 .. 11205216 (+)
RNA-Seq Expression	Cp4.1LG04g13840
Synteny	Cp4.1LG04g13840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCCCTCGAGCGGAAATTAAGTCCACTCATATTCATTAAATTAGATGATTTTAATTGAGTTGCCAATCATGGGGTACAAGGATTTGATCCGCACCAGATATTTGTATGGATGAAGAGAAGAACCAAGAAGAACTTCTTCCTCTTCAGGCCAAGAACGCCGCCATCGTCGGAGCTAAATAACGATGACCTCACTCGTAGTACCGCCTTCAACTTTGGGATCCTCGTTCTTCAGCTGGGTCGCTTCCAGTTCATCCAATAACTCTCTCAAGCCCCCAAAAATCTTCCTCAAAACCCCTTCTAATGCCGTGGCGCTATACCCCATTTCGTTAAAATCTTCAAACCGGCCTTCATTTGACAGATTTCCGCGAACGAAAATCTGGGCAACTTTAGGCGAAAAGGACCCAAATGGAGCAGCCCCACTTCAAGTTGTGGAAGAGAGTTCCAGCAGTGTATGTGATGTTTTTGCTTTTGATATTTCTCTAGTCGCTAAGATTTCTTGTTAGCATGTTGCCTTTCTTCTTAGACATTCAATGACATTTGATGGTTCGTTTTGGAAGTTCAATTACGTTCTTATTGAAAAGTTGTATAGAAGAATGAAGTACGTTCTATTCTCTAGGTTGTATGATCAACATTTTCTACCGCTTTATCGGGGAATGAAATATTCTTTATAAGGGTGTGGAAATCTCTCTCTAACATATGCGTTTTGAAATCGTGAAGCTGATAGTGATACGTAATGAGCTATGATTGAGGTGTTACATTATCTATTCATAAGCAACTGAACTAAAGATGAGTCAATTAGAGCTGTTGAAATAATGTATGAAGAATTGACTGGTGTAGATTGTGGACGAGGAAGTGGAAAAGAGTGTCAAAGTGCTAAAGGATGCGGCGAAGACTAGACGGGTAGCAGCAGAAGAAGTTTTGACAGCACTTTCTGTTCTTGAGAAGGCCAAACTTGACCCTTCAAAGTTTTTTAATACACTTGGTGGAACAAGCTCTCCAGGGAGAACCTGGATGCTTATTTTTACTGCTGAGGTTGATTTTATTTCCGTTTCTTTTGCTAATTAAGAATGTTTAATCACTCTAATTTCTGAATTCTAGTGCTGAATTGCAGAAAAAATTGGAGAAAGGGCGGTACTTTCCTCTCACAGCCATCCAGAGGTTTGATGCTGCTGTAAGTTCATCTGTCTTCCTCTCTAGCTTTTACTGTATGATTGCTACATCTCATCTTGGAAAAGATTGCATGAATTTAAAACATAGCAGCCTTAATGAGCAATAAGAACAGAAACCTAGGACTGCTCTAGTTGATTTTCTAGTGTTTTTTTGAGATGAATTCATGGTTGCATGGATTTTAGGGAAAAAGAATAGAGAATGGAGTGTTTCTGGGACCTATTGGAAGCTTAACATTTGAAGGTAGAATGTCGTGGAAGAACAGAATATTAGCGTTCATTTTCGAGCGAATTCGGATCAAATTTGGACCTTTAGAACCTTTGGAGATCAGTCTTGGTAAAAAGGATGAAAGGGAGCCAAGCAGTAAAGATCCTTTCTTTATCTGGTTTTATGTTGATGAGGAACTAGCTGTTGCTCGTGGTAGAAGTGGGGGAACTGCGTTCTGGTGCCGGTGTCGTCGTGTTAATACTTAGTTCTTTTCTTCATCAAACATCTGGCCTTGTTCAGTGTGTTATATTTGTTAAGAACATGTACATGCTAACTGGTCTATAAGAATTTCAATTTGTTCTCTCCTATTTGCTATCTCTGAGCTTCACTTCTGGAGAAATCAATGCCATTTTACTTCATACTTTGCATTGTCATTTGAATTAAGGCATGCTATTCATCCACTGAATGTTTACTATGATTTTCAAGCTGTTTGTTAGGTAATTGCCACTTCTCTTAGGAATTGTACCTTGGACAGCGATCAAGTGTTGATTCTATTGAACTTGTCTTAGCTTTTGTGAGATCCCACATCGGGGGGAGAGGGGAACGAAACATTCCTTATAAGGGTGTGGAAACCTCTCTCTAAAAAACATGTTTTAAAACTGTGAGGCTGACGACGATACATAACAGGCCAAGATGGACAATATTTGCTAACGGTGGACTTGGGCTGTTACAAATGGTATTAGAGCCAGACACCGGACAGTGTGGCAACAAAGATGTTGGCCCCCAAGGGGGGTGAATTGTTAGATCTCACATCAGTTGGAGAGGAGAACGAAACATTCCTTATAAAGGTGTGGAAACCTCTCCCTGGAAAACGTGTTCTTAAACCGTGAGACTGACGGCGATACGTAACGGGCCAAATTGTT

mRNA sequence

GTCCCTCGAGCGGAAATTAAGTCCACTCATATTCATTAAATTAGATGATTTTAATTGAGTTGCCAATCATGGGGTACAAGGATTTGATCCGCACCAGATATTTGTATGGATGAAGAGAAGAACCAAGAAGAACTTCTTCCTCTTCAGGCCAAGAACGCCGCCATCGTCGGAGCTAAATAACGATGACCTCACTCGTAGTACCGCCTTCAACTTTGGGATCCTCGTTCTTCAGCTGGGTCGCTTCCAGTTCATCCAATAACTCTCTCAAGCCCCCAAAAATCTTCCTCAAAACCCCTTCTAATGCCGTGGCGCTATACCCCATTTCGTTAAAATCTTCAAACCGGCCTTCATTTGACAGATTTCCGCGAACGAAAATCTGGGCAACTTTAGGCGAAAAGGACCCAAATGGAGCAGCCCCACTTCAAGTTGTGGAAGAGAGTTCCAGCAGTATTGTGGACGAGGAAGTGGAAAAGAGTGTCAAAGTGCTAAAGGATGCGGCGAAGACTAGACGGGTAGCAGCAGAAGAAGTTTTGACAGCACTTTCTGTTCTTGAGAAGGCCAAACTTGACCCTTCAAAGTTTTTTAATACACTTGGTGGAACAAGCTCTCCAGGGAGAACCTGGATGCTTATTTTTACTGCTGAGAAAAAATTGGAGAAAGGGCGGTACTTTCCTCTCACAGCCATCCAGAGGTTTGATGCTGCTGGAAAAAGAATAGAGAATGGAGTGTTTCTGGGACCTATTGGAAGCTTAACATTTGAAGGTAGAATGTCGTGGAAGAACAGAATATTAGCGTTCATTTTCGAGCGAATTCGGATCAAATTTGGACCTTTAGAACCTTTGGAGATCAGTCTTGGTAAAAAGGATGAAAGGGAGCCAAGCAGTAAAGATCCTTTCTTTATCTGGTTTTATGTTGATGAGGAACTAGCTGTTGCTCGTGGTAGAAGTGGGGGAACTGCGTTCTGGTGCCGGTGTCGTCGTGTTAATACTTAGTTCTTTTCTTCATCAAACATCTGGCCTTGTTCAGTGTGTTATATTTGTTAAGAACATGTACATGCTAACTGGTCTATAAGAATTTCAATTTGTTCTCTCCTATTTGCTATCTCTGAGCTTCACTTCTGGAGAAATCAATGCCATTTTACTTCATACTTTGCATTGTCATTTGAATTAAGGCATGCTATTCATCCACTGAATGTTTACTATGATTTTCAAGCTGTTTGTTAGGTAATTGCCACTTCTCTTAGGAATTGTACCTTGGACAGCGATCAAGTGTTGATTCTATTGAACTTGTCTTAGCTTTTGTGAGATCCCACATCGGGGGGAGAGGGGAACGAAACATTCCTTATAAGGGTGTGGAAACCTCTCTCTAAAAAACATGTTTTAAAACTGTGAGGCTGACGACGATACATAACAGGCCAAGATGGACAATATTTGCTAACGGTGGACTTGGGCTGTTACAAATGGTATTAGAGCCAGACACCGGACAGTGTGGCAACAAAGATGTTGGCCCCCAAGGGGGGTGAATTGTTAGATCTCACATCAGTTGGAGAGGAGAACGAAACATTCCTTATAAAGGTGTGGAAACCTCTCCCTGGAAAACGTGTTCTTAAACCGTGAGACTGACGGCGATACGTAACGGGCCAAATTGTT

Coding sequence (CDS)

ATGACCTCACTCGTAGTACCGCCTTCAACTTTGGGATCCTCGTTCTTCAGCTGGGTCGCTTCCAGTTCATCCAATAACTCTCTCAAGCCCCCAAAAATCTTCCTCAAAACCCCTTCTAATGCCGTGGCGCTATACCCCATTTCGTTAAAATCTTCAAACCGGCCTTCATTTGACAGATTTCCGCGAACGAAAATCTGGGCAACTTTAGGCGAAAAGGACCCAAATGGAGCAGCCCCACTTCAAGTTGTGGAAGAGAGTTCCAGCAGTATTGTGGACGAGGAAGTGGAAAAGAGTGTCAAAGTGCTAAAGGATGCGGCGAAGACTAGACGGGTAGCAGCAGAAGAAGTTTTGACAGCACTTTCTGTTCTTGAGAAGGCCAAACTTGACCCTTCAAAGTTTTTTAATACACTTGGTGGAACAAGCTCTCCAGGGAGAACCTGGATGCTTATTTTTACTGCTGAGAAAAAATTGGAGAAAGGGCGGTACTTTCCTCTCACAGCCATCCAGAGGTTTGATGCTGCTGGAAAAAGAATAGAGAATGGAGTGTTTCTGGGACCTATTGGAAGCTTAACATTTGAAGGTAGAATGTCGTGGAAGAACAGAATATTAGCGTTCATTTTCGAGCGAATTCGGATCAAATTTGGACCTTTAGAACCTTTGGAGATCAGTCTTGGTAAAAAGGATGAAAGGGAGCCAAGCAGTAAAGATCCTTTCTTTATCTGGTTTTATGTTGATGAGGAACTAGCTGTTGCTCGTGGTAGAAGTGGGGGAACTGCGTTCTGGTGCCGGTGTCGTCGTGTTAATACTTAG

Protein sequence

MTSLVVPPSTLGSSFFSWVASSSSNNSLKPPKIFLKTPSNAVALYPISLKSSNRPSFDRFPRTKIWATLGEKDPNGAAPLQVVEESSSSIVDEEVEKSVKVLKDAAKTRRVAAEEVLTALSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIENGVFLGPIGSLTFEGRMSWKNRILAFIFERIRIKFGPLEPLEISLGKKDEREPSSKDPFFIWFYVDEELAVARGRSGGTAFWCRCRRVNT

Homology

[Close]

BLAST of Cp4.1LG04g13840 vs. NCBI nr
Match: XP_023529441.1 (uncharacterized protein LOC111792300 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 533 bits (1374), Expect = 4.63e-191
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 1   MTSLVVPPSTLGSSFFSWVASSSSNNSLKPPKIFLKTPSNAVALYPISLKSSNRPSFDRF 60
           MTSLVVPPSTLGSSFFSWVASSSSNNSLKPPKIFLKTPSNAVALYPISLKSSNRPSFDRF
Sbjct: 1   MTSLVVPPSTLGSSFFSWVASSSSNNSLKPPKIFLKTPSNAVALYPISLKSSNRPSFDRF 60

Query: 61  PRTKIWATLGEKDPNGAAPLQVVEESSSSIVDEEVEKSVKVLKDAAKTRRVAAEEVLTAL 120
           PRTKIWATLGEKDPNGAAPLQVVEESSSSIVDEEVEKSVKVLKDAAKTRRVAAEEVLTAL
Sbjct: 61  PRTKIWATLGEKDPNGAAPLQVVEESSSSIVDEEVEKSVKVLKDAAKTRRVAAEEVLTAL 120

Query: 121 SVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIEN 180
           SVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIEN
Sbjct: 121 SVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIEN 180

Query: 181 GVFLGPIGSLTFEGRMSWKNRILAFIFERIRIKFGPLEPLEISLGKKDEREPSSKDPFFI 240
           GVFLGPIGSLTFEGRMSWKNRILAFIFERIRIKFGPLEPLEISLGKKDEREPSSKDPFFI
Sbjct: 181 GVFLGPIGSLTFEGRMSWKNRILAFIFERIRIKFGPLEPLEISLGKKDEREPSSKDPFFI 240

Query: 241 WFYVDEELAVARGRSGGTAFWCRCRRVNT 269
           WFYVDEELAVARGRSGGTAFWCRCRRVNT
Sbjct: 241 WFYVDEELAVARGRSGGTAFWCRCRRVNT 269

[Close]

BLAST of Cp4.1LG04g13840 vs. NCBI nr
Match: XP_023005200.1 (uncharacterized protein LOC111498299 [Cucurbita maxima])

HSP 1 Score: 526 bits (1354), Expect = 5.18e-188
Identity = 265/269 (98.51%), Postives = 266/269 (98.88%), Query Frame = 0


Query: 1   MTSLVVPPSTLGSSFFSWVASSSSNNSLKPPKIFLKTPSNAVALYPISLKSSNRPSFDRF 60
           MTSLVVPPSTLGSSFFSW ASSSSNNSL PPKIF KTPSNAVALYPISLKSSNRPSFDRF
Sbjct: 1   MTSLVVPPSTLGSSFFSWFASSSSNNSLNPPKIFRKTPSNAVALYPISLKSSNRPSFDRF 60

Query: 61  PRTKIWATLGEKDPNGAAPLQVVEESSSSIVDEEVEKSVKVLKDAAKTRRVAAEEVLTAL 120
           PRTKIWATLGEKDPNGAAPLQVVEESSSSIVDEEVEKSVKVLKDAAKTRRVAAEEVL+AL
Sbjct: 61  PRTKIWATLGEKDPNGAAPLQVVEESSSSIVDEEVEKSVKVLKDAAKTRRVAAEEVLSAL 120

Query: 121 SVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIEN 180
           SVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIEN
Sbjct: 121 SVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIEN 180

Query: 181 GVFLGPIGSLTFEGRMSWKNRILAFIFERIRIKFGPLEPLEISLGKKDEREPSSKDPFFI 240
           GVFLGPIGSLTFEGRMSWKNRILAFIFERIRIKFGPLEPLEISLGKKDEREPSSKDPFFI
Sbjct: 181 GVFLGPIGSLTFEGRMSWKNRILAFIFERIRIKFGPLEPLEISLGKKDEREPSSKDPFFI 240

Query: 241 WFYVDEELAVARGRSGGTAFWCRCRRVNT 269
           WFYVDEELAVARGRSGGTAFWCRCRRVNT
Sbjct: 241 WFYVDEELAVARGRSGGTAFWCRCRRVNT 269

[Close]

BLAST of Cp4.1LG04g13840 vs. NCBI nr
Match: KAG6587672.1 (hypothetical protein SDJN03_16237, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 521 bits (1342), Expect = 3.50e-186
Identity = 263/269 (97.77%), Postives = 264/269 (98.14%), Query Frame = 0


Query: 1   MTSLVVPPSTLGSSFFSWVASSSSNNSLKPPKIFLKTPSNAVALYPISLKSSNRPSFDRF 60
           MTSLVVPPSTLGSSFFSW ASSSS NS KPPKIFLKTPSNAVALYPISLKSSNRPSFDRF
Sbjct: 1   MTSLVVPPSTLGSSFFSWFASSSSKNSFKPPKIFLKTPSNAVALYPISLKSSNRPSFDRF 60

Query: 61  PRTKIWATLGEKDPNGAAPLQVVEESSSSIVDEEVEKSVKVLKDAAKTRRVAAEEVLTAL 120
            RTK WATLGEKDPNGAAPLQVVEESSSSIVDEEVEKSVKVLKDAAKTRRVAAEEVL+AL
Sbjct: 61  SRTKTWATLGEKDPNGAAPLQVVEESSSSIVDEEVEKSVKVLKDAAKTRRVAAEEVLSAL 120

Query: 121 SVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIEN 180
           SVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIEN
Sbjct: 121 SVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIEN 180

Query: 181 GVFLGPIGSLTFEGRMSWKNRILAFIFERIRIKFGPLEPLEISLGKKDEREPSSKDPFFI 240
           GVFLGPIGSLTFEGRMSWKNRILAFIFERIRIKFGPLEPLEISLGKKDEREPSSKDPFFI
Sbjct: 181 GVFLGPIGSLTFEGRMSWKNRILAFIFERIRIKFGPLEPLEISLGKKDEREPSSKDPFFI 240

Query: 241 WFYVDEELAVARGRSGGTAFWCRCRRVNT 269
           WFYVDEELAVARGRSGGTAFWCRCRRVNT
Sbjct: 241 WFYVDEELAVARGRSGGTAFWCRCRRVNT 269

[Close]

BLAST of Cp4.1LG04g13840 vs. NCBI nr
Match: XP_022929153.1 (uncharacterized protein LOC111435818 [Cucurbita moschata])

HSP 1 Score: 521 bits (1341), Expect = 4.97e-186
Identity = 262/269 (97.40%), Postives = 264/269 (98.14%), Query Frame = 0


Query: 1   MTSLVVPPSTLGSSFFSWVASSSSNNSLKPPKIFLKTPSNAVALYPISLKSSNRPSFDRF 60
           MTSL+VPPSTLGSSFFSW ASSSSNNS KPPKIFLKTPSNAVALYPISLKSSNRPSFDRF
Sbjct: 1   MTSLIVPPSTLGSSFFSWFASSSSNNSFKPPKIFLKTPSNAVALYPISLKSSNRPSFDRF 60

Query: 61  PRTKIWATLGEKDPNGAAPLQVVEESSSSIVDEEVEKSVKVLKDAAKTRRVAAEEVLTAL 120
            RTK WA LGEKDPNGAAPLQVVEESSSSIVDEEVEKSVKVLKDAAKTRRVAAEEVL+AL
Sbjct: 61  SRTKTWAILGEKDPNGAAPLQVVEESSSSIVDEEVEKSVKVLKDAAKTRRVAAEEVLSAL 120

Query: 121 SVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIEN 180
           SVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIEN
Sbjct: 121 SVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIEN 180

Query: 181 GVFLGPIGSLTFEGRMSWKNRILAFIFERIRIKFGPLEPLEISLGKKDEREPSSKDPFFI 240
           GVFLGPIGSLTFEGRMSWKNRILAFIFERIRIKFGPLEPLEISLGKKDEREPSSKDPFFI
Sbjct: 181 GVFLGPIGSLTFEGRMSWKNRILAFIFERIRIKFGPLEPLEISLGKKDEREPSSKDPFFI 240

Query: 241 WFYVDEELAVARGRSGGTAFWCRCRRVNT 269
           WFYVDEELAVARGRSGGTAFWCRCRRVNT
Sbjct: 241 WFYVDEELAVARGRSGGTAFWCRCRRVNT 269

[Close]

BLAST of Cp4.1LG04g13840 vs. NCBI nr
Match: KAG7021637.1 (hypothetical protein SDJN02_15363 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 491 bits (1264), Expect = 1.63e-174
Identity = 250/269 (92.94%), Postives = 251/269 (93.31%), Query Frame = 0


Query: 1   MTSLVVPPSTLGSSFFSWVASSSSNNSLKPPKIFLKTPSNAVALYPISLKSSNRPSFDRF 60
           MTSLVVPPSTLGSSFFSW ASSSSNNS KPPKIFLKTPSNAVALYPISLKSSNRPSFDRF
Sbjct: 1   MTSLVVPPSTLGSSFFSWFASSSSNNSFKPPKIFLKTPSNAVALYPISLKSSNRPSFDRF 60

Query: 61  PRTKIWATLGEKDPNGAAPLQVVEESSSSIVDEEVEKSVKVLKDAAKTRRVAAEEVLTAL 120
            RTK WATLGEKDPNGAAPLQVVEESSSS              DAAKTRRVAAEEVL+AL
Sbjct: 61  SRTKTWATLGEKDPNGAAPLQVVEESSSS--------------DAAKTRRVAAEEVLSAL 120

Query: 121 SVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIEN 180
           SVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIEN
Sbjct: 121 SVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIEN 180

Query: 181 GVFLGPIGSLTFEGRMSWKNRILAFIFERIRIKFGPLEPLEISLGKKDEREPSSKDPFFI 240
           GVFLGPIGSLTFEGRMSWKNRILAFIFERIRIKFGPLEPLEISLGKKDEREPSSKDPFFI
Sbjct: 181 GVFLGPIGSLTFEGRMSWKNRILAFIFERIRIKFGPLEPLEISLGKKDEREPSSKDPFFI 240

Query: 241 WFYVDEELAVARGRSGGTAFWCRCRRVNT 269
           WFYVDEELAVARGRSGGTAFWCRCRRVNT
Sbjct: 241 WFYVDEELAVARGRSGGTAFWCRCRRVNT 255

[Close]

BLAST of Cp4.1LG04g13840 vs. ExPASy TrEMBL
Match: A0A6J1KWT0 (uncharacterized protein LOC111498299 OS=Cucurbita maxima OX=3661 GN=LOC111498299 PE=4 SV=1)

HSP 1 Score: 526 bits (1354), Expect = 2.51e-188
Identity = 265/269 (98.51%), Postives = 266/269 (98.88%), Query Frame = 0


Query: 1   MTSLVVPPSTLGSSFFSWVASSSSNNSLKPPKIFLKTPSNAVALYPISLKSSNRPSFDRF 60
           MTSLVVPPSTLGSSFFSW ASSSSNNSL PPKIF KTPSNAVALYPISLKSSNRPSFDRF
Sbjct: 1   MTSLVVPPSTLGSSFFSWFASSSSNNSLNPPKIFRKTPSNAVALYPISLKSSNRPSFDRF 60

Query: 61  PRTKIWATLGEKDPNGAAPLQVVEESSSSIVDEEVEKSVKVLKDAAKTRRVAAEEVLTAL 120
           PRTKIWATLGEKDPNGAAPLQVVEESSSSIVDEEVEKSVKVLKDAAKTRRVAAEEVL+AL
Sbjct: 61  PRTKIWATLGEKDPNGAAPLQVVEESSSSIVDEEVEKSVKVLKDAAKTRRVAAEEVLSAL 120

Query: 121 SVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIEN 180
           SVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIEN
Sbjct: 121 SVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIEN 180

Query: 181 GVFLGPIGSLTFEGRMSWKNRILAFIFERIRIKFGPLEPLEISLGKKDEREPSSKDPFFI 240
           GVFLGPIGSLTFEGRMSWKNRILAFIFERIRIKFGPLEPLEISLGKKDEREPSSKDPFFI
Sbjct: 181 GVFLGPIGSLTFEGRMSWKNRILAFIFERIRIKFGPLEPLEISLGKKDEREPSSKDPFFI 240

Query: 241 WFYVDEELAVARGRSGGTAFWCRCRRVNT 269
           WFYVDEELAVARGRSGGTAFWCRCRRVNT
Sbjct: 241 WFYVDEELAVARGRSGGTAFWCRCRRVNT 269

[Close]

BLAST of Cp4.1LG04g13840 vs. ExPASy TrEMBL
Match: A0A6J1ERA0 (uncharacterized protein LOC111435818 OS=Cucurbita moschata OX=3662 GN=LOC111435818 PE=4 SV=1)

HSP 1 Score: 521 bits (1341), Expect = 2.41e-186
Identity = 262/269 (97.40%), Postives = 264/269 (98.14%), Query Frame = 0


Query: 1   MTSLVVPPSTLGSSFFSWVASSSSNNSLKPPKIFLKTPSNAVALYPISLKSSNRPSFDRF 60
           MTSL+VPPSTLGSSFFSW ASSSSNNS KPPKIFLKTPSNAVALYPISLKSSNRPSFDRF
Sbjct: 1   MTSLIVPPSTLGSSFFSWFASSSSNNSFKPPKIFLKTPSNAVALYPISLKSSNRPSFDRF 60

Query: 61  PRTKIWATLGEKDPNGAAPLQVVEESSSSIVDEEVEKSVKVLKDAAKTRRVAAEEVLTAL 120
            RTK WA LGEKDPNGAAPLQVVEESSSSIVDEEVEKSVKVLKDAAKTRRVAAEEVL+AL
Sbjct: 61  SRTKTWAILGEKDPNGAAPLQVVEESSSSIVDEEVEKSVKVLKDAAKTRRVAAEEVLSAL 120

Query: 121 SVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIEN 180
           SVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIEN
Sbjct: 121 SVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIEN 180

Query: 181 GVFLGPIGSLTFEGRMSWKNRILAFIFERIRIKFGPLEPLEISLGKKDEREPSSKDPFFI 240
           GVFLGPIGSLTFEGRMSWKNRILAFIFERIRIKFGPLEPLEISLGKKDEREPSSKDPFFI
Sbjct: 181 GVFLGPIGSLTFEGRMSWKNRILAFIFERIRIKFGPLEPLEISLGKKDEREPSSKDPFFI 240

Query: 241 WFYVDEELAVARGRSGGTAFWCRCRRVNT 269
           WFYVDEELAVARGRSGGTAFWCRCRRVNT
Sbjct: 241 WFYVDEELAVARGRSGGTAFWCRCRRVNT 269

[Close]

BLAST of Cp4.1LG04g13840 vs. ExPASy TrEMBL
Match: A0A5A7USJ0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G004270 PE=4 SV=1)

HSP 1 Score: 417 bits (1071), Expect = 3.56e-145
Identity = 215/271 (79.34%), Postives = 235/271 (86.72%), Query Frame = 0


Query: 1   MTSLVVPPSTLGSSFFSWVASSSSNNSLKPPKIFLKTPSNAVALYPISLKSSNRPSFDRF 60
           M+SL V  S+  S   +  ASSSSNNSL PPK+FLK P NA++   IS KSSNRPS  RF
Sbjct: 1   MSSLTVAASSFSSLSLTRFASSSSNNSLNPPKLFLKVPFNAISESLISFKSSNRPSIYRF 60

Query: 61  PRTKIWATLGEKDPNGAAPLQVVEESSSS--IVDEEVEKSVKVLKDAAKTRRVAAEEVLT 120
           P  K  ATL  KDPNGA P+ V EESS+S  IV+EEVEKSVKVLK+AAKTR+V AEEVL+
Sbjct: 61  PSLKTCATLDGKDPNGATPVLVQEESSTSSNIVNEEVEKSVKVLKNAAKTRKVPAEEVLS 120

Query: 121 ALSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRI 180
           ALSVLEKAKLDPS FFNTLGGTSSPGRTWMLIFTAEKKL+KGRYFP+TAIQRFDAAGKRI
Sbjct: 121 ALSVLEKAKLDPSNFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRI 180

Query: 181 ENGVFLGPIGSLTFEGRMSWKNRILAFIFERIRIKFGPLEPLEISLGKKDEREPSSKDPF 240
           ENGVFLGPIGSLTFEGR+SWK RILAFIFER+RIK GPL PLEISLG+K+EREPS+KDP 
Sbjct: 181 ENGVFLGPIGSLTFEGRLSWKTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPC 240

Query: 241 FIWFYVDEELAVARGRSGGTAFWCRCRRVNT 269
           FIWFYVDEE+AVARGRSGGTAFWCRCRRVNT
Sbjct: 241 FIWFYVDEEIAVARGRSGGTAFWCRCRRVNT 271

[Close]

BLAST of Cp4.1LG04g13840 vs. ExPASy TrEMBL
Match: A0A1S3BXG3 (uncharacterized protein LOC103494159 OS=Cucumis melo OX=3656 GN=LOC103494159 PE=4 SV=1)

HSP 1 Score: 417 bits (1071), Expect = 3.56e-145
Identity = 215/271 (79.34%), Postives = 235/271 (86.72%), Query Frame = 0


Query: 1   MTSLVVPPSTLGSSFFSWVASSSSNNSLKPPKIFLKTPSNAVALYPISLKSSNRPSFDRF 60
           M+SL V  S+  S   +  ASSSSNNSL PPK+FLK P NA++   IS KSSNRPS  RF
Sbjct: 1   MSSLTVAASSFSSLSLTRFASSSSNNSLNPPKLFLKVPFNAISESLISFKSSNRPSIYRF 60

Query: 61  PRTKIWATLGEKDPNGAAPLQVVEESSSS--IVDEEVEKSVKVLKDAAKTRRVAAEEVLT 120
           P  K  ATL  KDPNGA P+ V EESS+S  IV+EEVEKSVKVLK+AAKTR+V AEEVL+
Sbjct: 61  PSLKTCATLDGKDPNGATPVLVQEESSTSSNIVNEEVEKSVKVLKNAAKTRKVPAEEVLS 120

Query: 121 ALSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRI 180
           ALSVLEKAKLDPS FFNTLGGTSSPGRTWMLIFTAEKKL+KGRYFP+TAIQRFDAAGKRI
Sbjct: 121 ALSVLEKAKLDPSNFFNTLGGTSSPGRTWMLIFTAEKKLKKGRYFPVTAIQRFDAAGKRI 180

Query: 181 ENGVFLGPIGSLTFEGRMSWKNRILAFIFERIRIKFGPLEPLEISLGKKDEREPSSKDPF 240
           ENGVFLGPIGSLTFEGR+SWK RILAFIFER+RIK GPL PLEISLG+K+EREPS+KDP 
Sbjct: 181 ENGVFLGPIGSLTFEGRLSWKTRILAFIFERVRIKIGPLNPLEISLGQKEEREPSTKDPC 240

Query: 241 FIWFYVDEELAVARGRSGGTAFWCRCRRVNT 269
           FIWFYVDEE+AVARGRSGGTAFWCRCRRVNT
Sbjct: 241 FIWFYVDEEIAVARGRSGGTAFWCRCRRVNT 271

[Close]

BLAST of Cp4.1LG04g13840 vs. ExPASy TrEMBL
Match: A0A6J1C517 (uncharacterized protein LOC111007458 OS=Momordica charantia OX=3673 GN=LOC111007458 PE=4 SV=1)

HSP 1 Score: 414 bits (1064), Expect = 2.70e-144
Identity = 214/269 (79.55%), Postives = 234/269 (86.99%), Query Frame = 0


Query: 1   MTSLVVPPSTLGSSFFSWVASSSSNNSLKPPKIFLKTPSNAVALYPISLKSSNRPSFDRF 60
           M+SLV+  ST     FSW ASSSS      PKIF KTPSNA   YPIS KSSN+PS  R 
Sbjct: 1   MSSLVMAAST-----FSWFASSSS------PKIFPKTPSNANPSYPISFKSSNQPSLSRL 60

Query: 61  PRTKIWATLGEKDPNGAAPLQVVEESSSSIV-DEEVEKSVKVLKDAAKTRRVAAEEVLTA 120
            R K  A L  KDPNGAAPL V EE+SSS++ DEEVEKSVK+LK AAKTRRVAAEE+L+A
Sbjct: 61  LRVKTLAALDGKDPNGAAPLLVEEENSSSLIMDEEVEKSVKLLKSAAKTRRVAAEEILSA 120

Query: 121 LSVLEKAKLDPSKFFNTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIE 180
           LS++EKAKLDPS+FF+TLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIE
Sbjct: 121 LSIIEKAKLDPSRFFDTLGGTSSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIE 180

Query: 181 NGVFLGPIGSLTFEGRMSWKNRILAFIFERIRIKFGPLEPLEISLGKKDEREPSSKDPFF 240
           NGV+LGP+GSLTFEGR+SWKNRILAFIFE+IRIK GPL PLEI+LGKK+EREPSSKDPFF
Sbjct: 181 NGVYLGPVGSLTFEGRLSWKNRILAFIFEQIRIKVGPLSPLEINLGKKEEREPSSKDPFF 240

Query: 241 IWFYVDEELAVARGRSGGTAFWCRCRRVN 268
           IWFYVDEE+AVARGRSGGTAFWCRCRRVN
Sbjct: 241 IWFYVDEEIAVARGRSGGTAFWCRCRRVN 258

[Close]

BLAST of Cp4.1LG04g13840 vs. TAIR 10
Match: AT1G18060.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 74 Blast hits to 74 proteins in 29 species: Archae - 0; Bacteria - 19; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). )

HSP 1 Score: 299.7 bits (766), Expect = 2.4e-81
Identity = 142/188 (75.53%), Postives = 163/188 (86.70%), Query Frame = 0


Query: 81  QVVEESSSSIVDEEVEKSVKVLKDAAKTRRVAAEEVLTALSVLEKAKLDPSKFFNTLGGT 140
           Q+V  +   I +++V +SV VLK AAKTR+VAA+E+L A S +EKAK+DPS F  TLGG 
Sbjct: 37  QIVPPAKDQIPNKQVTESVNVLKTAAKTRKVAADEILAAFSAIEKAKIDPSTFLETLGGP 96

Query: 141 SSPGRTWMLIFTAEKKLEKGRYFPLTAIQRFDAAGKRIENGVFLGPIGSLTFEGRMSWKN 200
            SPGRTWMLIFTAEKKL KGRYFPLTA+QRFDAAGKRIENGV+LGP G+LTFEGR SWKN
Sbjct: 97  ESPGRTWMLIFTAEKKLTKGRYFPLTAVQRFDAAGKRIENGVYLGPFGALTFEGRFSWKN 156

Query: 201 RILAFIFERIRIKFGPLEPLEISLGKKDE-REPSSKDPFFIWFYVDEELAVARGRSGGTA 260
           RILAF+FE+IRIK GPL+PLE SLGKKD   EPS+KDPFFIWFY+DEE+AVARGRSGGTA
Sbjct: 157 RILAFVFEQIRIKIGPLDPLEFSLGKKDAVEEPSNKDPFFIWFYIDEEIAVARGRSGGTA 216

Query: 261 FWCRCRRV 268
           FWCRCRR+
Sbjct: 217 FWCRCRRI 224

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g13840 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG04g13840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023529441.1	4.63e-191	100.00	uncharacterized protein LOC111792300 [Cucurbita pepo subsp. pepo]	[more]
XP_023005200.1	5.18e-188	98.51	uncharacterized protein LOC111498299 [Cucurbita maxima]	[more]
KAG6587672.1	3.50e-186	97.77	hypothetical protein SDJN03_16237, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022929153.1	4.97e-186	97.40	uncharacterized protein LOC111435818 [Cucurbita moschata]	[more]
KAG7021637.1	1.63e-174	92.94	hypothetical protein SDJN02_15363 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Cp4.1LG04g13840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KWT0	2.51e-188	98.51	uncharacterized protein LOC111498299 OS=Cucurbita maxima OX=3661 GN=LOC111498299...	[more]
A0A6J1ERA0	2.41e-186	97.40	uncharacterized protein LOC111435818 OS=Cucurbita moschata OX=3662 GN=LOC1114358...	[more]
A0A5A7USJ0	3.56e-145	79.34	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3BXG3	3.56e-145	79.34	uncharacterized protein LOC103494159 OS=Cucumis melo OX=3656 GN=LOC103494159 PE=...	[more]
A0A6J1C517	2.70e-144	79.55	uncharacterized protein LOC111007458 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]

BLAST of Cp4.1LG04g13840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G18060.1	2.4e-81	75.53	unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplas...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35690	OS01G0363500 PROTEIN	coord: 15..266

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g13840.1	Cp4.1LG04g13840.1	mRNA