Cp4.1LG04g13820 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTGCACCAACCTTCCTGCGGAGACCCAGATTTCAAAATCAAATGCAATGAATATCAGTACCCAGTTCTTGAAATTTCCGATGAAGATTTTATCATCCAAAACATTTTCCCCCAAAACCATTCGTTTCTGTTGGCCAGTGCTGCAGCTTACGACCAACCTTCATGCCCCTCGCATAATATTAGCCTCCATGGAAAACCCTTTTATTTCACTTCGGATACTGAAGATTTGTTCTTCTTCTATGATTGCCCATCAAAGCCTGAGGGTTACATCTTTGAACTGAATTGTAATTCCGATGAAACCCACTTTTCTTTTGCGATTTTCCACAAGGGTCTTGTGGAGTTGGAGAAATCTCGCTTGCAGTCTTGCCAGTCTATGATTCGTGTTCCTATCCGCAAGAACTCGATTGCTAGAGATGATTTGGGGAAATTGGGTTACGTTGACATTTTGAAAATGGGTTTTGTTCTGAATTGGAACTGCAGCGATTGTAAGCGAAGTGGTGGGTTTTGTACATTTCAAAACAATCTGTTTATGCGTTTTTTGTGGCGATTATGAACCGATGAAACTGATGAACATACGATGCCAATGTTTGTATAATGTTTTCTCTTTGTTTAATGTTGCAGGAAATGGCAACGCAAGGAGAAACAACATTATCATTGGTAACACATGAACCCGCTCTGTTTTTACTCCTCTGTTCATACGTTTGCCTCTCTTACAAATGATTAAAAACTCCATTGTTTTCATTCATCCAGGTACGTGCATTGGCTTTGGAGCCTTGCTTTTGAGTATAATTGTTCTATGCATCTGCTACCGACGACGCCAACTCCGTCGTAAACGTTCTCACGCCGTACCGTATGCGCAACGGAGCATTCCCTTGAATCCGTCGAATCCCCATTCTGTGGAAGAGCTTGAGAAGGGAGATTCATACTTGGGTGTTCATCTTTTCTCTTATAAAGAACTTGAAGAAGCCACCAACCATTTTGACTCCAATAAAGAGCTTGGAGATGGAGGCTTCGGCACGGTTTATTATGGTAAGAGATTTCATTTAAGTTCAATCATGAGTTAGTGATTGTTTGATTGATCTTTTCGTATATCTGTTTAGGCTTACTCAAAGATGGGCGTGCCGTTGCTGTCAAAAGGTTGTTTGAAAGCAATTTCAGGAGAGTTGAGCAGTTCATGAATGAGGTGGAGATCCTAGCCCGCCTGCGCCATCGTAACCTCGTTTCGCTTTACGGTTGCACCTCACGGAACAGCCGTGAGCTTCTGCTTGTGTATGAATACGTCTCGAATGGTACGGTGGCCGATAATCTCCATGGAAAGCTAGCAAAGCCTGGAAAGCTTCCATGGTCTACAAGAATGAAGATTGCTATAGAGACTGCAAGTGCTTTGGTGTATCTCCATGCTTCTGAAATCATCCACCGTGATGTCAAAACCAACAACATTCTCCTTGACAACAATTTTTGTGTTAAAGTAGCCGATTTCGGTTTGTCCCGTCTCTTCCCGCTCGATGTCACGCATGTCTCAACCGCTCCACAAGGCACTCCTGGCTATGTCGATCCGGAGTACCATCAGTGTTACCAACTCTCTGATAAAAGCGATGTCTTTAGCTTCGGTGTGGTACTAGTTGAACTCATATCCTCAATGCCTGCTGTTGACATCACAAGGCACAGACAAGAGATCAATCTATTCAACATGGCTATCAAAAAAATCCAAAGCCACGCATTGAATGAACTCGTCGACCCTTCACTCGGTTTTGAAACGGACTACAAGATCCAAAACATGATCACCGGAGTAGCCGAGTTGGCATTTCGATGCCTACAGAGCATGAAAGATGAGAGGCCAACAATGATGGAAGTTCTTGACACTCTGAACATCATACAGAAACAGAACGCCGAGAAAGGGAATGATCGCGATACCGACATTTCGGCTAAGGACGACGCCGTGCTACTGAAGAATGGCTATGGATCTTCTCCAAGCTCCCTGTCTGTATCTTGGGTTAGCAGTAACACCTCCACAGCAACGAATGAAACCGTCAGTGCCTAAGCCTCTCTTCCCTCCCTTGCCATGATCAAGTAGCTTGTAATCATATTCCATTTCCATGTCCCTCATCAATCTATTACTCCGATGAACTTCTACATGTTTTCGAGATGTATATGATGTTTAAGAGCACGCATTTTTTTGTGTTTATTGAATTGATTCTTCATTCTTTACGTTCGAATTCTTTCAAAGAAAGCTATATTTCATCTAAGTTAAATTACAAGTTTATTTCTAAACTTTTGGTACCTTGACTAGTCAACCCAAATCAACGTCTGGACGGAACG ATGGCTGCTGCAGCTTACGACCAACCTTCATGCCCCTCGCATAATATTAGCCTCCATGGAAAACCCTTTTATTTCACTTCGGATACTGAAGATTTGTTCTTCTTCTATGATTGCCCATCAAAGCCTGAGGGTTACATCTTTGAACTGAATTGTAATTCCGATGAAACCCACTTTTCTTTTGCGATTTTCCACAAGGGTCTTGTGGAGTTGGAGAAATCTCGCTTGCAGTCTTGCCAGTCTATGATTCGTGTTCCTATCCGCAAGAACTCGATTGCTAGAGATGATTTGGGGAAATTGGGTTACGTTGACATTTTGAAAATGGGTTTTGTTCTGAATTGGAACTGCAGCGATTGTAAGCGAAGTGGAAATGGCAACGCAAGGAGAAACAACATTATCATTGGTACGTGCATTGGCTTTGGAGCCTTGCTTTTGAGTATAATTGTTCTATGCATCTGCTACCGACGACGCCAACTCCGTCGTAAACGTTCTCACGCCGTACCGTATGCGCAACGGAGCATTCCCTTGAATCCGTCGAATCCCCATTCTGTGGAAGAGCTTGAGAAGGGAGATTCATACTTGGGTGTTCATCTTTTCTCTTATAAAGAACTTGAAGAAGCCACCAACCATTTTGACTCCAATAAAGAGCTTGGAGATGGAGGCTTCGGCACGGCTTACTCAAAGATGGGCGTGCCGTTGCTGTCAAAAGGTTGTTTGAAAGCAATTTCAGGAGAGTTGAGCAGTTCATGAATGAGGTGGAGATCCTAGCCCGCCTGCGCCATCGTAACCTCGTTTCGCTTTACGGTTGCACCTCACGGAACAGCCGTGAGCTTCTGCTTGTGTATGAATACGTCTCGAATGGTACGGTGGCCGATAATCTCCATGGAAAGCTAGCAAAGCCTGGAAAGCTTCCATGGTCTACAAGAATGAAGATTGCTATAGAGACTGCAAGTGCTTTGGTGTATCTCCATGCTTCTGAAATCATCCACCGTGATGTCAAAACCAACAACATTCTCCTTGACAACAATTTTTGTGTTAAAGTAGCCGATTTCGGTTTGTCCCGTCTCTTCCCGCTCGATGTCACGCATGTCTCAACCGCTCCACAAGGCACTCCTGGCTATGTCGATCCGGAGTACCATCAGTGTTACCAACTCTCTGATAAAAGCGATGTCTTTAGCTTCGGTGTGGTACTAGTTGAACTCATATCCTCAATGCCTGCTGTTGACATCACAAGGCACAGACAAGAGATCAATCTATTCAACATGGCTATCAAAAAAATCCAAAGCCACGCATTGAATGAACTCGTCGACCCTTCACTCGGTTTTGAAACGGACTACAAGATCCAAAACATGATCACCGGAGTAGCCGAGTTGGCATTTCGATGCCTACAGAGCATGAAAGATGAGAGGCCAACAATGATGGAAGTTCTTGACACTCTGAACATCATACAGAAACAGAACGCCGAGAAAGGGAATGATCGCGATACCGACATTTCGGCTAAGGACGACGCCGTGCTACTGAAGAATGGCTATGGATCTTCTCCAAGCTCCCTGTCTGTATCTTGGGTTAGCAGTAACACCTCCACAGCAACGAATGAAACCTCAACCCAAATCAACGTCTGGACGGAACG ATGGCTGCTGCAGCTTACGACCAACCTTCATGCCCCTCGCATAATATTAGCCTCCATGGAAAACCCTTTTATTTCACTTCGGATACTGAAGATTTGTTCTTCTTCTATGATTGCCCATCAAAGCCTGAGGGTTACATCTTTGAACTGAATTGTAATTCCGATGAAACCCACTTTTCTTTTGCGATTTTCCACAAGGGTCTTGTGGAGTTGGAGAAATCTCGCTTGCAGTCTTGCCAGTCTATGATTCGTGTTCCTATCCGCAAGAACTCGATTGCTAGAGATGATTTGGGGAAATTGGGTTACGTTGACATTTTGAAAATGGGTTTTGTTCTGAATTGGAACTGCAGCGATTGTAAGCGAAGTGGAAATGGCAACGCAAGGAGAAACAACATTATCATTGGTACGTGCATTGGCTTTGGAGCCTTGCTTTTGAGTATAATTGTTCTATGCATCTGCTACCGACGACGCCAACTCCGTCGTAAACGTTCTCACGCCGTACCGTATGCGCAACGGAGCATTCCCTTGAATCCGTCGAATCCCCATTCTGTGGAAGAGCTTGAGAAGGGAGATTCATACTTGGGTGTTCATCTTTTCTCTTATAAAGAACTTGAAGAAGCCACCAACCATTTTGACTCCAATAAAGAGCTTGGAGATGGAGGCTTCGGCACGGCTTACTCAAAGATGGGCGTGCCGTTGCTGTCAAAAGGTTGTTTGAAAGCAATTTCAGGAGAGTTGAGCAGTTCATGA MAAAAYDQPSCPSHNISLHGKPFYFTSDTEDLFFFYDCPSKPEGYIFELNCNSDETHFSFAIFHKGLVELEKSRLQSCQSMIRVPIRKNSIARDDLGKLGYVDILKMGFVLNWNCSDCKRSGNGNARRNNIIIGTCIGFGALLLSIIVLCICYRRRQLRRKRSHAVPYAQRSIPLNPSNPHSVEELEKGDSYLGVHLFSYKELEEATNHFDSNKELGDGGFGTAYSKMGVPLLSKGCLKAISGELSSS Homology
BLAST of Cp4.1LG04g13820 vs. ExPASy Swiss-Prot
Match: P0C5E2 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 OS=Arabidopsis thaliana OX=3702 GN=LRK10L-1.2 PE=2 SV=3) HSP 1 Score: 113.2 bits (282), Expect = 4.1e-24 Identity = 85/261 (32.57%), Postives = 129/261 (49.43%), Query Frame = 0
BLAST of Cp4.1LG04g13820 vs. ExPASy Swiss-Prot
Match: Q8VYG0 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.3 OS=Arabidopsis thaliana OX=3702 GN=LRK10L-1.3 PE=2 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 5.8e-10 Identity = 51/134 (38.06%), Postives = 69/134 (51.49%), Query Frame = 0
BLAST of Cp4.1LG04g13820 vs. ExPASy Swiss-Prot
Match: F4HQ17 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.4 OS=Arabidopsis thaliana OX=3702 GN=LRK10L-1.4 PE=2 SV=2) HSP 1 Score: 60.5 bits (145), Expect = 3.2e-08 Identity = 43/110 (39.09%), Postives = 56/110 (50.91%), Query Frame = 0
BLAST of Cp4.1LG04g13820 vs. ExPASy Swiss-Prot
Match: Q9LSL5 (L-type lectin-domain containing receptor kinase IX.2 OS=Arabidopsis thaliana OX=3702 GN=LECRK92 PE=1 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 6.6e-06 Identity = 38/135 (28.15%), Postives = 65/135 (48.15%), Query Frame = 0
BLAST of Cp4.1LG04g13820 vs. ExPASy Swiss-Prot
Match: Q9C6K9 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1 OS=Arabidopsis thaliana OX=3702 GN=LRK10L-1.1 PE=2 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 1.1e-05 Identity = 38/129 (29.46%), Postives = 56/129 (43.41%), Query Frame = 0
BLAST of Cp4.1LG04g13820 vs. NCBI nr
Match: XP_023531998.1 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 463 bits (1191), Expect = 8.92e-157 Identity = 222/224 (99.11%), Postives = 223/224 (99.55%), Query Frame = 0
BLAST of Cp4.1LG04g13820 vs. NCBI nr
Match: KAG6587660.1 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 452 bits (1162), Expect = 2.72e-153 Identity = 216/224 (96.43%), Postives = 220/224 (98.21%), Query Frame = 0
BLAST of Cp4.1LG04g13820 vs. NCBI nr
Match: KAG7021623.1 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 449 bits (1155), Expect = 1.13e-152 Identity = 214/224 (95.54%), Postives = 219/224 (97.77%), Query Frame = 0
BLAST of Cp4.1LG04g13820 vs. NCBI nr
Match: XP_022933864.1 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 [Cucurbita moschata]) HSP 1 Score: 447 bits (1150), Expect = 6.67e-152 Identity = 216/225 (96.00%), Postives = 220/225 (97.78%), Query Frame = 0
BLAST of Cp4.1LG04g13820 vs. NCBI nr
Match: XP_023001712.1 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 [Cucurbita maxima]) HSP 1 Score: 434 bits (1117), Expect = 6.28e-147 Identity = 209/222 (94.14%), Postives = 214/222 (96.40%), Query Frame = 0
BLAST of Cp4.1LG04g13820 vs. ExPASy TrEMBL
Match: A0A6J1F0X7 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 OS=Cucurbita moschata OX=3662 GN=LOC111441151 PE=4 SV=1) HSP 1 Score: 447 bits (1150), Expect = 3.23e-152 Identity = 216/225 (96.00%), Postives = 220/225 (97.78%), Query Frame = 0
BLAST of Cp4.1LG04g13820 vs. ExPASy TrEMBL
Match: A0A6J1KHE2 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 OS=Cucurbita maxima OX=3661 GN=LOC111495761 PE=4 SV=1) HSP 1 Score: 434 bits (1117), Expect = 3.04e-147 Identity = 209/222 (94.14%), Postives = 214/222 (96.40%), Query Frame = 0
BLAST of Cp4.1LG04g13820 vs. ExPASy TrEMBL
Match: A0A5A7UQE9 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00780 PE=4 SV=1) HSP 1 Score: 271 bits (692), Expect = 3.56e-83 Identity = 150/260 (57.69%), Postives = 175/260 (67.31%), Query Frame = 0
BLAST of Cp4.1LG04g13820 vs. ExPASy TrEMBL
Match: A0A1S3BW80 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494139 PE=4 SV=1) HSP 1 Score: 271 bits (694), Expect = 1.53e-82 Identity = 151/260 (58.08%), Postives = 174/260 (66.92%), Query Frame = 0
BLAST of Cp4.1LG04g13820 vs. ExPASy TrEMBL
Match: A0A6J1C0J9 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 OS=Momordica charantia OX=3673 GN=LOC111006965 PE=4 SV=1) HSP 1 Score: 262 bits (670), Expect = 8.54e-80 Identity = 144/228 (63.16%), Postives = 167/228 (73.25%), Query Frame = 0
BLAST of Cp4.1LG04g13820 vs. TAIR 10
Match: AT1G18390.2 (Protein kinase superfamily protein ) HSP 1 Score: 105.9 bits (263), Expect = 4.7e-23 Identity = 82/264 (31.06%), Postives = 126/264 (47.73%), Query Frame = 0
BLAST of Cp4.1LG04g13820 vs. TAIR 10
Match: AT1G18390.1 (Protein kinase superfamily protein ) HSP 1 Score: 77.0 bits (188), Expect = 2.3e-14 Identity = 49/120 (40.83%), Postives = 70/120 (58.33%), Query Frame = 0
BLAST of Cp4.1LG04g13820 vs. TAIR 10
Match: AT5G38210.1 (Protein kinase family protein ) HSP 1 Score: 66.2 bits (160), Expect = 4.1e-11 Identity = 51/134 (38.06%), Postives = 69/134 (51.49%), Query Frame = 0
BLAST of Cp4.1LG04g13820 vs. TAIR 10
Match: AT1G66880.1 (Protein kinase superfamily protein ) HSP 1 Score: 60.5 bits (145), Expect = 2.3e-09 Identity = 43/110 (39.09%), Postives = 56/110 (50.91%), Query Frame = 0
BLAST of Cp4.1LG04g13820 vs. TAIR 10
Match: AT5G65600.1 (Concanavalin A-like lectin protein kinase family protein ) HSP 1 Score: 52.8 bits (125), Expect = 4.7e-07 Identity = 38/135 (28.15%), Postives = 65/135 (48.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|