Cp4.1LG04g13630 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG04g13630
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Protein disulfide-isomerase LQY1
Location	Cp4.1LG04: 11068364 .. 11072720 (+)
RNA-Seq Expression	Cp4.1LG04g13630
Synteny	Cp4.1LG04g13630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAAAGTGCAAAATTCAGTTGTGAATGGACGGTTATCCTTTCAGCATAATTAGGAGCTGGCAGACGCCCCTCATCCGCTCGCTGCTGCTTCACCGGGTTCGAGCGCTCCCAGAATCGCTGCTGCCGAGATAGACAACCACCAAACTCTCTCCCCATTTCCCATCGATGTATGCGCTACCTTCTACGGCCGCTCTTAACGTTCTCCCTCAGATTCCATTGCTAAAATCTGAAGTTCCTCTTCTCTATTGCTGTTCTTGTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGTTGCAACCACTTCTTCCGCCGCGGCGATACACTCAATCAGCTCTGTTATCCATCCCGTTTTGCTCTTTAATAGCTACGACGCGCCATTGGACACCCAAACTTTTCTTGCTACTTTCAGCGTTTTGGTCGCCATTTCTCTGTCCCTCTTTCTTGGTCTTAAGGTATCGCTTCTTTGCCCATTTCTCTGACGGTTTGCTTCTGAATTTATTGTTTGGAAGTTGTGAGGATGATTAAATTTTTTGGTTCGGGTTTTGCAGGGTGGTCCTGTGCCTTGTGAGCGATGTGCTGGAAATGGTAACTATAGTTTGCTTCAGAGTTGCGTTTAATTTAGTGCCTTCAGAATTAAATTTTACTTAGCCATGAATTATGAAGTAGCAATATTAAGGGATGAATTTAATACTAGTTCTGGTCGTCTCTTAGGATTGAGTTTATTTATTGAATAAATTGTTTTACAACACATGAGATCCATGCTTTCAAGTGATCGATGAACATTGCATTTTTGGATTGGCAATCCTCAAGCGATCTTGTCATTATAATCATAGTCTTGAACTGATCCATGCTTTCAAGTGATCGATGAACATTGCATTTTTGGATTGGCAATCCTCAAGCGATCTTGTCATTATAATCATAGTCTTGAACACGTTTGAATCGTTCTATACTCTGTTTTCAGTTCATCAAATTTTTTGTTTAGTTGGTTTTAAATGAACCTCGACATAACTTAGTTAGTTGAGGCGTATATCCTCAATCAAAAAGTAAAGGCGGAGGCTCGAATTTTCACCATTCATATGTTGCTAGTTAACCTTATACTATTAAATGGAGAAATGAGAGAAGGAATATTGCTTATCCTTCGCATATAGATAGGTTATGTGAATAGTTCATCTCATAACGTTAATAAGGTTGGATTGCATTCTGAGTATGGCATCTATACGGGAATCCCACATAAGGGCTGAGAAGCCTTCCTCCAAAGGAAACTTCTGGCTGTCCTTATGGTTCATTTTGAGGAGATTAGAGCACATATTTAGTCTCTTTAGAAATGTAGTATCGGTAGCAAACTTGCAGACTGTTATATCCAATGAATTTCCCTCTTTAATTCTTTCGGTAGCTACCGAGTTAACGAATGAAACGATTGGAGTTGTACCTAACATAGTTGTTGCCATTGACCTTTTCATCCCCTGGAAGCTCCAATCGTTTCATTCGTTAACGATCCACTAAATCTAGACTCTATCAAATGTTGCTAATCTGTTGAGGCTCGTTTTCCATAAATGAATGTTTTTGTCTCAAAATATATCTTAAACGACATTGCTAAAAGAGTTGGCAACAATGTCGATGTGCAGGTGGCACGAAATGCATCTTCTGTGACAACGGTAAGATGCAGCAACAGTCGGGATTAATTGACTGCAAAGTGTGCAAGGGTGCAGGTATGTACTCATCTTCTTATACTTTCAAATTACGTCAAGCATTCTTTGATACGGTTTGTTGATCGAAATCTCTACGTCAACTGATAACACGACTGATGACCACTTTTTAACCTGTTTCTAGTTTTTATTACCTAAACATTGGAGAAACTCTTGTATCAACTTGAAATTAAAGTTTAAAGAAGTGTTGTTAGTCTGTTATTAAAAAAAAACTGATCTTGTATGTTCGATTTTAGTTTTCGCTTGTTATCTCGAGTAATCAAAGCTTTTGATTGATCAAGAACTTTTATCTCATTTGAGTTTTCGTTTTCTTCGCAGGGTTGATATTCTGCAAAAAGTGTGGCGGTTCTGGATATTCCAGACGGCTATGAACCATTGAGTGATAAGTTTTCTCCACTTGCAATGTAACTTATGACATTGTGTCTCAACTCACTTAGTAAATAATTCAATTATTCAAGATCATCGAGTCTCAAATAGCTTCTTCTTCATCACATGGATGTCACTTGTTTAATTTTCTAATATAAATTAGCTTTCCTATAAGATGAAAATGGGATAAGTCCTTTTTTCTCAACAATCATATATTGAATAGTTTACTCAAAACAAGGGGATCCATCAATAAGGCATAATCAGCATAATCATCTTCACATGCACATATACAGAAATTGTGGCAACTGTTCAATGAAAACTTAACTGTGATGTAGATTTCCCTCTAGCAATAATTTTGCCTCCATAACTGAAGAGCGAATGCTTCTCATCTCTTCTTCCACTTTTTCGGATAAGAAGCATGAGTTATGCCTGTTATCGTCTAATAACCGGTTTGTCTTTTGGACGGCTACAGATTTTTCTGTTACCAATTCCTCCATCCTTTGATGCTCCATCTGCAGTTCTTCTTCCAAAATTCTTATCTCTGCCTCCTTCAGACCTGCTTCAAATAGGCACTCTTGGTACTCCAACATAATGTTCTCAAATTCTATCATTCCACTATTCCTCATTTCCAACAGTGTCTCCTTTTCACTGATTACCCCTTGAACTCCGGCCTCCATCTCGTCAACGGACCTTGAAGCTTTCTGTACCTCCAACTGAACAGCTTTGATTTCACTATCAGCCTTTCTAGACTTCCTTGTCAAATCTTCAAGTTCCTTTCTTATTGCCCCTAGTTTTTCTTTAGCTAGCTTCATCTCATTTTGCAACTTAGTTTTTTCCTCTGCAGACTTGAGTAAATCTGTGGCTCGACCAGTGAATTGCCAGCTCTTTGGTTGGGGATCTATTTTCTCGACATTATCTATTGCAAAGAGGACCTTGTCATTTTCTTGTTTTTGACTTTCTTCATCTAACTTGGATTTTAAGCTTGCAAGGTTGCTCCTCAGTTCCCCTTCAGATTGTTGAATCTTTACACATTGAGCCTCGATTTCTGCTTTGTGTGCTTGAAGGGAGGTCAGCTCGCTTTTCCTCTGGGCCAAATAAGACTTTGAAGCATCTGCCCTTGCTCTTGCCCTTGTTTCTCGTTGTTCAAAATAAATTACGGAAGAAGAAAAGTTAGTAAGAGAGTATCTCAGAGCGCAAAGCTTACTCTGTGCAAGATCTCTACTTTCTTGCTTTTTGGCTAAGACTAGTTTAAGGGATTCAACCTCCTCCTGCTTTAAGTGAACTTCATCTTCCACAACTTCAACCTGTTTTGAGAGTTTATCGGCCTCAAATATCATCTTTTCAAGTGAACTTAAAACACTGATATTCCTGGTTGAACCTGAAAGCTGTTCTTCTGCTGTTTCAAGCTTCTTTCTAATCATACTTAAATCTTCTGGCAACATTTCTACAATAAGAGCGGGTGGATCAGTTTCCATCTGTGTTTCAGATTGCATCTGTTTTGTATCGTCCACATTAGACGTACCTTTCTCTTCTACTAATTCGTCTGATTCATCCAACCCATTCCCTTCCTTTATATCAGAGTTTGTGTGGGAACATAATTCATCTGCAACAAGACCATCATTTTCTTCTTCAAGAGAATTTCTAAGTCTTGGGATGGACTCATTGCTCTCTCCCCCTCCATCGAGTATTTCCATTTCAGATGGTACAGATTGACAGACCAAATTTTGTGCTTCATTGGGGTTGAAAGGTTCAACGTATGCCTCGTTCTTCCCTTCATCAACTTCAACAAACTTCTCAATGCAATCAGATTCTCCTTTCGTGTCAGCTTTTGTGTTTTCTAAAGAAGAAAGCATCTTCTTGAACTCATCTTTCTCCTGCATGGCCCCTTCATACAAGCTCATTAACTTATCATTTTCCTCGTGCATTTCCACTAGCTGTTGCTGTAGCCGCTCAACCGCTTTCTCATGAGCCTCTTTTTCATCGGAAGTTTCGACCACTTTAGCATCATTCTGTGCAGTTTCAACTTTACTTCCATTTCCAAACTTACTTTCCGAAGCTGCTGTTTCATACAGTTCAATGAGTTTATTGTTATCCTCGATTAGAACTCTTAGCTTCATACGAAGTTCATCATTCTCTTTGGACAAGGCTATTGCCGTTTCATGAGCACTTGCTTCTCTTTGACTAGCAGCAGCAATGGCGTCAACCATTGTCTTTAACTCCATTTGGTCGCTAAAACTGATGGTGGACATGTCATTTGATGCCAAAGGAAGCTCAACTTGATTAGTTC

mRNA sequence

TGAAAGTGCAAAATTCAGTTGTGAATGGACGGTTATCCTTTCAGCATAATTAGGAGCTGGCAGACGCCCCTCATCCGCTCGCTGCTGCTTCACCGGGTTCGAGCGCTCCCAGAATCGCTGCTGCCGAGATAGACAACCACCAAACTCTCTCCCCATTTCCCATCGATGTATGCGCTACCTTCTACGGCCGCTCTTAACGTTCTCCCTCAGATTCCATTGCTAAAATCTGAAGTTCCTCTTCTCTATTGCTGTTCTTGTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGTTGCAACCACTTCTTCCGCCGCGGCGATACACTCAATCAGCTCTGTTATCCATCCCGTTTTGCTCTTTAATAGCTACGACGCGCCATTGGACACCCAAACTTTTCTTGCTACTTTCAGCGTTTTGGTCGCCATTTCTCTGTCCCTCTTTCTTGGTCTTAAGGGTGGTCCTGTGCCTTGTGAGCGATGTGCTGGAAATGGTGGCACGAAATGCATCTTCTGTGACAACGGTAAGATGCAGCAACAGTCGGGATTAATTGACTGCAAAGTGTGCAAGGGTGCAGGGTTGATATTCTGCAAAAAGTGTGGCGGTTCTGGATATTCCAGACGGCTATGAACCATTGAGTGATAAGTTTTCTCCACTTGCAATGTAACTTATGACATTGTGTCTCAACTCACTTAGTAAATAATTCAATTATTCAAGATCATCGAGTCTCAAATAGCTTCTTCTTCATCACATGGATGTCACTTGTTTAATTTTCTAATATAAATTAGCTTTCCTATAAGATGAAAATGGGATAAGTCCTTTTTTCTCAACAATCATATATTGAATAGTTTACTCAAAACAAGGGGATCCATCAATAAGGCATAATCAGCATAATCATCTTCACATGCACATATACAGAAATTGTGGCAACTGTTCAATGAAAACTTAACTGTGATGTAGATTTCCCTCTAGCAATAATTTTGCCTCCATAACTGAAGAGCGAATGCTTCTCATCTCTTCTTCCACTTTTTCGGATAAGAAGCATGAGTTATGCCTGTTATCGTCTAATAACCGGTTTGTCTTTTGGACGGCTACAGATTTTTCTGTTACCAATTCCTCCATCCTTTGATGCTCCATCTGCAGTTCTTCTTCCAAAATTCTTATCTCTGCCTCCTTCAGACCTGCTTCAAATAGGCACTCTTGGTACTCCAACATAATGTTCTCAAATTCTATCATTCCACTATTCCTCATTTCCAACAGTGTCTCCTTTTCACTGATTACCCCTTGAACTCCGGCCTCCATCTCGTCAACGGACCTTGAAGCTTTCTGTACCTCCAACTGAACAGCTTTGATTTCACTATCAGCCTTTCTAGACTTCCTTGTCAAATCTTCAAGTTCCTTTCTTATTGCCCCTAGTTTTTCTTTAGCTAGCTTCATCTCATTTTGCAACTTAGTTTTTTCCTCTGCAGACTTGAGTAAATCTGTGGCTCGACCAGTGAATTGCCAGCTCTTTGGTTGGGGATCTATTTTCTCGACATTATCTATTGCAAAGAGGACCTTGTCATTTTCTTGTTTTTGACTTTCTTCATCTAACTTGGATTTTAAGCTTGCAAGGTTGCTCCTCAGTTCCCCTTCAGATTGTTGAATCTTTACACATTGAGCCTCGATTTCTGCTTTGTGTGCTTGAAGGGAGGTCAGCTCGCTTTTCCTCTGGGCCAAATAAGACTTTGAAGCATCTGCCCTTGCTCTTGCCCTTGTTTCTCGTTGTTCAAAATAAATTACGGAAGAAGAAAAGTTAGTAAGAGAGTATCTCAGAGCGCAAAGCTTACTCTGTGCAAGATCTCTACTTTCTTGCTTTTTGGCTAAGACTAGTTTAAGGGATTCAACCTCCTCCTGCTTTAAGTGAACTTCATCTTCCACAACTTCAACCTGTTTTGAGAGTTTATCGGCCTCAAATATCATCTTTTCAAGTGAACTTAAAACACTGATATTCCTGGTTGAACCTGAAAGCTGTTCTTCTGCTGTTTCAAGCTTCTTTCTAATCATACTTAAATCTTCTGGCAACATTTCTACAATAAGAGCGGGTGGATCAGTTTCCATCTGTGTTTCAGATTGCATCTGTTTTGTATCGTCCACATTAGACGTACCTTTCTCTTCTACTAATTCGTCTGATTCATCCAACCCATTCCCTTCCTTTATATCAGAGTTTGTGTGGGAACATAATTCATCTGCAACAAGACCATCATTTTCTTCTTCAAGAGAATTTCTAAGTCTTGGGATGGACTCATTGCTCTCTCCCCCTCCATCGAGTATTTCCATTTCAGATGGTACAGATTGACAGACCAAATTTTGTGCTTCATTGGGGTTGAAAGGTTCAACGTATGCCTCGTTCTTCCCTTCATCAACTTCAACAAACTTCTCAATGCAATCAGATTCTCCTTTCGTGTCAGCTTTTGTGTTTTCTAAAGAAGAAAGCATCTTCTTGAACTCATCTTTCTCCTGCATGGCCCCTTCATACAAGCTCATTAACTTATCATTTTCCTCGTGCATTTCCACTAGCTGTTGCTGTAGCCGCTCAACCGCTTTCTCATGAGCCTCTTTTTCATCGGAAGTTTCGACCACTTTAGCATCATTCTGTGCAGTTTCAACTTTACTTCCATTTCCAAACTTACTTTCCGAAGCTGCTGTTTCATACAGTTCAATGAGTTTATTGTTATCCTCGATTAGAACTCTTAGCTTCATACGAAGTTCATCATTCTCTTTGGACAAGGCTATTGCCGTTTCATGAGCACTTGCTTCTCTTTGACTAGCAGCAGCAATGGCGTCAACCATTGTCTTTAACTCCATTTGGTCGCTAAAACTGATGGTGGACATGTCATTTGATGCCAAAGGAAGCTCAACTTGATTAGTTC

Coding sequence (CDS)

ATGTATGCGCTACCTTCTACGGCCGCTCTTAACGTTCTCCCTCAGATTCCATTGCTAAAATCTGAAGTTCCTCTTCTCTATTGCTGTTCTTGTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGTTGCAACCACTTCTTCCGCCGCGGCGATACACTCAATCAGCTCTGTTATCCATCCCGTTTTGCTCTTTAATAGCTACGACGCGCCATTGGACACCCAAACTTTTCTTGCTACTTTCAGCGTTTTGGTCGCCATTTCTCTGTCCCTCTTTCTTGGTCTTAAGGGTGGTCCTGTGCCTTGTGAGCGATGTGCTGGAAATGGTGGCACGAAATGCATCTTCTGTGACAACGGTAAGATGCAGCAACAGTCGGGATTAATTGACTGCAAAGTGTGCAAGGGTGCAGGGTTGATATTCTGCAAAAAGTGTGGCGGTTCTGGATATTCCAGACGGCTATGA

Protein sequence

MYALPSTAALNVLPQIPLLKSEVPLLYCCSCASASASASASVATTSSAAAIHSISSVIHPVLLFNSYDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCIFCDNGKMQQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL

Homology

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BLAST of Cp4.1LG04g13630 vs. ExPASy Swiss-Prot
Match: A0A2K3DZC4 (Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=BSD2 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 5.1e-09
Identity = 35/107 (32.71%), Postives = 51/107 (47.66%), Query Frame = 0


Query: 69  APLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCIFCD----NGKMQQQ- 128
           AP   Q  +   +V+ A+S++L+ GLK  PVPC  C G GG +C  C     N  + +  
Sbjct: 46  APETLQDIIVGGAVVGAVSVALYAGLKKDPVPCSLCQGTGGIRCFACGGDGRNATVSRDD 105

Query: 129 --------SGLI--------------DCKVCKGAGLIFCKKCGGSGY 149
                    G+               DCKVC+GAGL+ C +C G+G+
Sbjct: 106 LYDSKALGGGVAPPKRDPLGRTINPRDCKVCRGAGLVLCSQCKGTGF 152

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BLAST of Cp4.1LG04g13630 vs. NCBI nr
Match: XP_023531506.1 (uncharacterized protein LOC111793722 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 296 bits (758), Expect = 5.03e-101
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MYALPSTAALNVLPQIPLLKSEVPLLYCCSCASASASASASVATTSSAAAIHSISSVIHP 60
           MYALPSTAALNVLPQIPLLKSEVPLLYCCSCASASASASASVATTSSAAAIHSISSVIHP
Sbjct: 1   MYALPSTAALNVLPQIPLLKSEVPLLYCCSCASASASASASVATTSSAAAIHSISSVIHP 60

Query: 61  VLLFNSYDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCIFCDNGKM 120
           VLLFNSYDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCIFCDNGKM
Sbjct: 61  VLLFNSYDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCIFCDNGKM 120

Query: 121 QQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 152
           QQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL
Sbjct: 121 QQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 152

[Close]

BLAST of Cp4.1LG04g13630 vs. NCBI nr
Match: XP_022933994.1 (uncharacterized protein LOC111441233 [Cucurbita moschata])

HSP 1 Score: 291 bits (746), Expect = 3.40e-99
Identity = 149/152 (98.03%), Postives = 150/152 (98.68%), Query Frame = 0


Query: 1   MYALPSTAALNVLPQIPLLKSEVPLLYCCSCASASASASASVATTSSAAAIHSISSVIHP 60
           MYALPSTAALNVLPQ+PLLKSEVPLLYCCSCAS S SASASVATTSSAAAIHSISSVIHP
Sbjct: 1   MYALPSTAALNVLPQLPLLKSEVPLLYCCSCASVSDSASASVATTSSAAAIHSISSVIHP 60

Query: 61  VLLFNSYDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCIFCDNGKM 120
           VLLFNSYDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCIFCDNGKM
Sbjct: 61  VLLFNSYDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCIFCDNGKM 120

Query: 121 QQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 152
           QQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL
Sbjct: 121 QQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 152

[Close]

BLAST of Cp4.1LG04g13630 vs. NCBI nr
Match: KAG6587696.1 (Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021662.1 hypothetical protein SDJN02_15388, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 291 bits (744), Expect = 6.87e-99
Identity = 149/152 (98.03%), Postives = 150/152 (98.68%), Query Frame = 0


Query: 1   MYALPSTAALNVLPQIPLLKSEVPLLYCCSCASASASASASVATTSSAAAIHSISSVIHP 60
           MYALPSTAALNVLPQ+PLLKSEVPLLYCCSCASAS SA ASVATTSSAAAIHSISSVIHP
Sbjct: 1   MYALPSTAALNVLPQLPLLKSEVPLLYCCSCASASDSAFASVATTSSAAAIHSISSVIHP 60

Query: 61  VLLFNSYDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCIFCDNGKM 120
           VLLFNSYDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCIFCDNGKM
Sbjct: 61  VLLFNSYDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCIFCDNGKM 120

Query: 121 QQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 152
           QQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL
Sbjct: 121 QQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 152

[Close]

BLAST of Cp4.1LG04g13630 vs. NCBI nr
Match: XP_022973600.1 (uncharacterized protein LOC111472182 [Cucurbita maxima])

HSP 1 Score: 280 bits (717), Expect = 8.12e-95
Identity = 147/153 (96.08%), Postives = 148/153 (96.73%), Query Frame = 0


Query: 1   MYALPSTAALNV-LPQIPLLKSEVPLLYCCSCASASASASASVATTSSAAAIHSISSVIH 60
           MYALPSTAALNV LPQ+PLLKSEVPLLYCCSCASASAS    VATTSSAAAIHSISSVIH
Sbjct: 1   MYALPSTAALNVVLPQLPLLKSEVPLLYCCSCASASAS----VATTSSAAAIHSISSVIH 60

Query: 61  PVLLFNSYDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCIFCDNGK 120
           PVLLFNSYDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCIFCDNGK
Sbjct: 61  PVLLFNSYDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCIFCDNGK 120

Query: 121 MQQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 152
           MQQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL
Sbjct: 121 MQQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 149

[Close]

BLAST of Cp4.1LG04g13630 vs. NCBI nr
Match: XP_008453507.1 (PREDICTED: uncharacterized protein LOC103494197 isoform X1 [Cucumis melo] >KAA0058156.1 protein disulfide-isomerase LQY1 [Cucumis melo var. makuwa])

HSP 1 Score: 253 bits (646), Expect = 5.42e-84
Identity = 129/152 (84.87%), Postives = 143/152 (94.08%), Query Frame = 0


Query: 1   MYALPSTAALNVLPQIPLLKSEVPLLYCCSCASASASASASVATTSSAAAIHSISSVIHP 60
           M ALPSTAAL+VLP +PLLK EVPLLYCCSC+SA A+ S++V+T  SAAAIH I+ +IHP
Sbjct: 1   MAALPSTAALHVLPHLPLLKPEVPLLYCCSCSSA-ATTSSTVST--SAAAIHPINPLIHP 60

Query: 61  VLLFNSYDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCIFCDNGKM 120
           +LLF+S+DAP+DTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKC+FCDNGKM
Sbjct: 61  LLLFDSFDAPIDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKM 120

Query: 121 QQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 152
           QQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL
Sbjct: 121 QQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 149

[Close]

BLAST of Cp4.1LG04g13630 vs. ExPASy TrEMBL
Match: A0A6J1F1B4 (uncharacterized protein LOC111441233 OS=Cucurbita moschata OX=3662 GN=LOC111441233 PE=4 SV=1)

HSP 1 Score: 291 bits (746), Expect = 1.65e-99
Identity = 149/152 (98.03%), Postives = 150/152 (98.68%), Query Frame = 0


Query: 1   MYALPSTAALNVLPQIPLLKSEVPLLYCCSCASASASASASVATTSSAAAIHSISSVIHP 60
           MYALPSTAALNVLPQ+PLLKSEVPLLYCCSCAS S SASASVATTSSAAAIHSISSVIHP
Sbjct: 1   MYALPSTAALNVLPQLPLLKSEVPLLYCCSCASVSDSASASVATTSSAAAIHSISSVIHP 60

Query: 61  VLLFNSYDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCIFCDNGKM 120
           VLLFNSYDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCIFCDNGKM
Sbjct: 61  VLLFNSYDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCIFCDNGKM 120

Query: 121 QQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 152
           QQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL
Sbjct: 121 QQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 152

[Close]

BLAST of Cp4.1LG04g13630 vs. ExPASy TrEMBL
Match: A0A6J1IBS2 (uncharacterized protein LOC111472182 OS=Cucurbita maxima OX=3661 GN=LOC111472182 PE=4 SV=1)

HSP 1 Score: 280 bits (717), Expect = 3.93e-95
Identity = 147/153 (96.08%), Postives = 148/153 (96.73%), Query Frame = 0


Query: 1   MYALPSTAALNV-LPQIPLLKSEVPLLYCCSCASASASASASVATTSSAAAIHSISSVIH 60
           MYALPSTAALNV LPQ+PLLKSEVPLLYCCSCASASAS    VATTSSAAAIHSISSVIH
Sbjct: 1   MYALPSTAALNVVLPQLPLLKSEVPLLYCCSCASASAS----VATTSSAAAIHSISSVIH 60

Query: 61  PVLLFNSYDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCIFCDNGK 120
           PVLLFNSYDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCIFCDNGK
Sbjct: 61  PVLLFNSYDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCIFCDNGK 120

Query: 121 MQQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 152
           MQQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL
Sbjct: 121 MQQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 149

[Close]

BLAST of Cp4.1LG04g13630 vs. ExPASy TrEMBL
Match: A0A5A7UVF5 (Protein disulfide-isomerase LQY1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G004730 PE=4 SV=1)

HSP 1 Score: 253 bits (646), Expect = 2.63e-84
Identity = 129/152 (84.87%), Postives = 143/152 (94.08%), Query Frame = 0


Query: 1   MYALPSTAALNVLPQIPLLKSEVPLLYCCSCASASASASASVATTSSAAAIHSISSVIHP 60
           M ALPSTAAL+VLP +PLLK EVPLLYCCSC+SA A+ S++V+T  SAAAIH I+ +IHP
Sbjct: 1   MAALPSTAALHVLPHLPLLKPEVPLLYCCSCSSA-ATTSSTVST--SAAAIHPINPLIHP 60

Query: 61  VLLFNSYDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCIFCDNGKM 120
           +LLF+S+DAP+DTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKC+FCDNGKM
Sbjct: 61  LLLFDSFDAPIDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKM 120

Query: 121 QQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 152
           QQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL
Sbjct: 121 QQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 149

[Close]

BLAST of Cp4.1LG04g13630 vs. ExPASy TrEMBL
Match: A0A1S3BXK6 (uncharacterized protein LOC103494197 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494197 PE=4 SV=1)

HSP 1 Score: 253 bits (646), Expect = 2.63e-84
Identity = 129/152 (84.87%), Postives = 143/152 (94.08%), Query Frame = 0


Query: 1   MYALPSTAALNVLPQIPLLKSEVPLLYCCSCASASASASASVATTSSAAAIHSISSVIHP 60
           M ALPSTAAL+VLP +PLLK EVPLLYCCSC+SA A+ S++V+T  SAAAIH I+ +IHP
Sbjct: 1   MAALPSTAALHVLPHLPLLKPEVPLLYCCSCSSA-ATTSSTVST--SAAAIHPINPLIHP 60

Query: 61  VLLFNSYDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCIFCDNGKM 120
           +LLF+S+DAP+DTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKC+FCDNGKM
Sbjct: 61  LLLFDSFDAPIDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCVFCDNGKM 120

Query: 121 QQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 152
           QQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL
Sbjct: 121 QQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 149

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BLAST of Cp4.1LG04g13630 vs. ExPASy TrEMBL
Match: A0A6J1BZ42 (uncharacterized protein LOC111007052 OS=Momordica charantia OX=3673 GN=LOC111007052 PE=4 SV=1)

HSP 1 Score: 253 bits (646), Expect = 2.91e-84
Identity = 128/152 (84.21%), Postives = 142/152 (93.42%), Query Frame = 0


Query: 1   MYALPSTAALNVLPQIPLLKSEVPLLYCCSCASASASASASVATTSSAAAIHSISSVIHP 60
           M ALPSTAAL++LPQ+PLLK E+PLLY  S ASASA+ +AS A ++SAAAIH I+ VIHP
Sbjct: 1   MSALPSTAALHLLPQLPLLKLELPLLYSSSSASASAATTASSACSTSAAAIHPIAPVIHP 60

Query: 61  VLLFNSYDAPLDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAGNGGTKCIFCDNGKM 120
           +LLFN++DAPLDTQTFLATFSVLVAISLSLFLGLKGGP+PCERCAGNGGTKC+FCDNGKM
Sbjct: 61  ILLFNTFDAPLDTQTFLATFSVLVAISLSLFLGLKGGPMPCERCAGNGGTKCVFCDNGKM 120

Query: 121 QQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 152
           QQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL
Sbjct: 121 QQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 152

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BLAST of Cp4.1LG04g13630 vs. TAIR 10
Match: AT3G44020.1 (thylakoid lumenal P17.1 protein )

HSP 1 Score: 153.7 bits (387), Expect = 1.2e-37
Identity = 71/106 (66.98%), Postives = 88/106 (83.02%), Query Frame = 0


Query: 52  HSISSVIHPVLLF--NSYDAP---LDTQTFLATFSVLVAISLSLFLGLKGGPVPCERCAG 111
           HS + +IHP +LF  +++D     +DTQTF+ T S++VAI+LSLFLG KG PVPCERC G
Sbjct: 54  HSANLIIHPSVLFLSSAFDGGGGFIDTQTFIVTISLVVAIALSLFLGFKGDPVPCERCGG 113

Query: 112 NGGTKCIFCDNGKMQQQSGLIDCKVCKGAGLIFCKKCGGSGYSRRL 153
           NGGTKC+FC  GKM+ +SG++DCKVCKG+GLIFCKKCGGSGYSRRL
Sbjct: 114 NGGTKCVFCLEGKMKVESGMVDCKVCKGSGLIFCKKCGGSGYSRRL 159

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g13630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0A2K3DZC4	5.1e-09	32.71	Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic OS=Chlamydomonas reinhardtii OX...	[more]

BLAST of Cp4.1LG04g13630 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023531506.1	5.03e-101	100.00	uncharacterized protein LOC111793722 [Cucurbita pepo subsp. pepo]	[more]
XP_022933994.1	3.40e-99	98.03	uncharacterized protein LOC111441233 [Cucurbita moschata]	[more]
KAG6587696.1	6.87e-99	98.03	Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic, partial [Cucurbita argyrosperm...	[more]
XP_022973600.1	8.12e-95	96.08	uncharacterized protein LOC111472182 [Cucurbita maxima]	[more]
XP_008453507.1	5.42e-84	84.87	PREDICTED: uncharacterized protein LOC103494197 isoform X1 [Cucumis melo] >KAA00...	[more]

BLAST of Cp4.1LG04g13630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F1B4	1.65e-99	98.03	uncharacterized protein LOC111441233 OS=Cucurbita moschata OX=3662 GN=LOC1114412...	[more]
A0A6J1IBS2	3.93e-95	96.08	uncharacterized protein LOC111472182 OS=Cucurbita maxima OX=3661 GN=LOC111472182...	[more]
A0A5A7UVF5	2.63e-84	84.87	Protein disulfide-isomerase LQY1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A1S3BXK6	2.63e-84	84.87	uncharacterized protein LOC103494197 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1BZ42	2.91e-84	84.21	uncharacterized protein LOC111007052 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]

BLAST of Cp4.1LG04g13630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G44020.1	1.2e-37	66.98	thylakoid lumenal P17.1 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR15852	PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN	coord: 21..152
None	No IPR available	PANTHER	PTHR15852:SF52	THYLAKOID LUMENAL P17.1 PROTEIN	coord: 21..152

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g13630.1	Cp4.1LG04g13630.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016853	isomerase activity