Cp4.1LG04g13590 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG04g13590
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionCalcium-binding EF-hand family protein
LocationCp4.1LG04: 11153037 .. 11153597 (+)
RNA-Seq ExpressionCp4.1LG04g13590
SyntenyCp4.1LG04g13590
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTACTGACTCGAACCAGATTGCGGCATCAAACTCCGATACCGAGCAGGTCTTGAAGTCCAAGCCCTCCTTCCTTCTCCAGGACAACGCTGAACTCCGCAAGGTTTTCGACCGCTTCGATGCCAATGGCGACGGGAAGATCTCCTTATCCGAGCTTGATTCCGTCCTCAAGTCCTTAGGCTCATCCGTCCCCTACGACGAGCTCCGCGCTGTCATGGAGGATCTCGACACCGATAAGGACGGTTTCATCAATATCGATGAGTTTGCCGTCTTCTGTAAGGAGCCGATGGCCTCTAATGAAGCCGGAGCGTCGGAGCTTCGTGACGCCTTCGACCTCTACGATCAGGACCATAACGGCCTGATCTCGCAATCTGAGCTCCACCTCGTCCTCAATCGCCTCGGAATCACATGCTCCAAGGAGGACTGTCAAAGGATGATCCACTCCGTCGATTCCGATGGCGATGGAAATGTTAATTTCGAGGAGTTTAGGAAGATGATGTCCAATAATTCCAACTCCGAGGCGCCGAATCAGAATGGAACTGCCGCCACGGCGCCTTAG

mRNA sequence

ATGGCTACTGACTCGAACCAGATTGCGGCATCAAACTCCGATACCGAGCAGGTCTTGAAGTCCAAGCCCTCCTTCCTTCTCCAGGACAACGCTGAACTCCGCAAGGTTTTCGACCGCTTCGATGCCAATGGCGACGGGAAGATCTCCTTATCCGAGCTTGATTCCGTCCTCAAGTCCTTAGGCTCATCCGTCCCCTACGACGAGCTCCGCGCTGTCATGGAGGATCTCGACACCGATAAGGACGGTTTCATCAATATCGATGAGTTTGCCGTCTTCTGTAAGGAGCCGATGGCCTCTAATGAAGCCGGAGCGTCGGAGCTTCGTGACGCCTTCGACCTCTACGATCAGGACCATAACGGCCTGATCTCGCAATCTGAGCTCCACCTCGTCCTCAATCGCCTCGGAATCACATGCTCCAAGGAGGACTGTCAAAGGATGATCCACTCCGTCGATTCCGATGGCGATGGAAATGTTAATTTCGAGGAGTTTAGGAAGATGATGTCCAATAATTCCAACTCCGAGGCGCCGAATCAGAATGGAACTGCCGCCACGGCGCCTTAG

Coding sequence (CDS)

ATGGCTACTGACTCGAACCAGATTGCGGCATCAAACTCCGATACCGAGCAGGTCTTGAAGTCCAAGCCCTCCTTCCTTCTCCAGGACAACGCTGAACTCCGCAAGGTTTTCGACCGCTTCGATGCCAATGGCGACGGGAAGATCTCCTTATCCGAGCTTGATTCCGTCCTCAAGTCCTTAGGCTCATCCGTCCCCTACGACGAGCTCCGCGCTGTCATGGAGGATCTCGACACCGATAAGGACGGTTTCATCAATATCGATGAGTTTGCCGTCTTCTGTAAGGAGCCGATGGCCTCTAATGAAGCCGGAGCGTCGGAGCTTCGTGACGCCTTCGACCTCTACGATCAGGACCATAACGGCCTGATCTCGCAATCTGAGCTCCACCTCGTCCTCAATCGCCTCGGAATCACATGCTCCAAGGAGGACTGTCAAAGGATGATCCACTCCGTCGATTCCGATGGCGATGGAAATGTTAATTTCGAGGAGTTTAGGAAGATGATGTCCAATAATTCCAACTCCGAGGCGCCGAATCAGAATGGAACTGCCGCCACGGCGCCTTAG

Protein sequence

MATDSNQIAASNSDTEQVLKSKPSFLLQDNAELRKVFDRFDANGDGKISLSELDSVLKSLGSSVPYDELRAVMEDLDTDKDGFINIDEFAVFCKEPMASNEAGASELRDAFDLYDQDHNGLISQSELHLVLNRLGITCSKEDCQRMIHSVDSDGDGNVNFEEFRKMMSNNSNSEAPNQNGTAATAP
Homology
BLAST of Cp4.1LG04g13590 vs. ExPASy Swiss-Prot
Match: Q9LE22 (Probable calcium-binding protein CML27 OS=Arabidopsis thaliana OX=3702 GN=CML27 PE=1 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.1e-45
Identity = 100/179 (55.87%), Postives = 133/179 (74.30%), Query Frame = 0

Query: 8   IAASNSDTEQVLKSKPSFLLQDNA---ELRKVFDRFDANGDGKISLSELDSVLKSLGSSV 67
           +A++N +T     +KP+    D A   EL+KVFD+FD+NGDGKIS+ EL  V K++G+S 
Sbjct: 1   MASANPET-----AKPTPATVDMANPEELKKVFDQFDSNGDGKISVLELGGVFKAMGTSY 60

Query: 68  PYDELRAVMEDLDTDKDGFINIDEFAVFCKEPMASNEAGASELRDAFDLYDQDHNGLISQ 127
              EL  V+E++DTD+DG+IN+DEF+  C+     + + A+E+RDAFDLYDQD NGLIS 
Sbjct: 61  TETELNRVLEEVDTDRDGYINLDEFSTLCR-----SSSSAAEIRDAFDLYDQDKNGLISA 120

Query: 128 SELHLVLNRLGITCSKEDCQRMIHSVDSDGDGNVNFEEFRKMMSNNSNSEAPNQNGTAA 184
           SELH VLNRLG++CS EDC RMI  VD+DGDGNVNFEEF+KMM+++S     N NG+AA
Sbjct: 121 SELHQVLNRLGMSCSVEDCTRMIGPVDADGDGNVNFEEFQKMMTSSS---LLNSNGSAA 166

BLAST of Cp4.1LG04g13590 vs. ExPASy Swiss-Prot
Match: Q9C9U8 (Probable calcium-binding protein CML26 OS=Arabidopsis thaliana OX=3702 GN=CML26 PE=1 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.3e-43
Identity = 92/159 (57.86%), Postives = 119/159 (74.84%), Query Frame = 0

Query: 11  SNSDTEQVLKSKPSFLLQDNAELRKVFDRFDANGDGKISLSELDSVLKSLGSSVPYDELR 70
           +N++ E   KS        + EL+KVFD+FDANGDGKIS+SEL +V KS+G+S   +EL 
Sbjct: 2   ANTNLESTNKSTTP---STDMELKKVFDKFDANGDGKISVSELGNVFKSMGTSYTEEELN 61

Query: 71  AVMEDLDTDKDGFINIDEFAVFCKEPMASNEAGASELRDAFDLYDQDHNGLISQSELHLV 130
            V++++D D DGFIN +EFA  C+     + + A E+R+AFDLYDQ+ NGLIS SE+H V
Sbjct: 62  RVLDEIDIDCDGFINQEEFATICR-----SSSSAVEIREAFDLYDQNKNGLISSSEIHKV 121

Query: 131 LNRLGITCSKEDCQRMIHSVDSDGDGNVNFEEFRKMMSN 170
           LNRLG+TCS EDC RMI  VD+DGDGNVNFEEF+KMMS+
Sbjct: 122 LNRLGMTCSVEDCVRMIGHVDTDGDGNVNFEEFQKMMSS 152

BLAST of Cp4.1LG04g13590 vs. ExPASy Swiss-Prot
Match: Q9M7R0 (Calcium-binding allergen Ole e 8 OS=Olea europaea OX=4146 PE=1 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.8e-43
Identity = 98/171 (57.31%), Postives = 125/171 (73.10%), Query Frame = 0

Query: 10  ASNSDTEQVLKSKPSFLLQDNAELRKVFDRFDANGDGKISLSELDSVLKSLGSSVPYDEL 69
           A+N+D      SKPS  LQ+  E++ VF+RFDANGDGKIS  EL  VLK+LGS+   +E+
Sbjct: 2   AANTDR----NSKPSVYLQEPNEVQGVFNRFDANGDGKISGDELAGVLKALGSNTSKEEI 61

Query: 70  RAVMEDLDTDKDGFINIDEFAVFCK---EPMASNEAGASELRDAFDLYDQDHNGLISQSE 129
             +ME++DTDKDGFIN+ EFA F K   +P  S+  G +EL++AF+LYDQDHNGLIS  E
Sbjct: 62  GRIMEEIDTDKDGFINVQEFAAFVKAETDPYPSS-GGENELKEAFELYDQDHNGLISSVE 121

Query: 130 LHLVLNRLGITCSKEDCQRMIHSVDSDGDGNVNFEEFRKMMSNNS--NSEA 176
           LH +L RLG   ++ DC  MI SVDSDGDG V+FEEF+KMM+N S  NS+A
Sbjct: 122 LHKILTRLGERYAEHDCVEMIKSVDSDGDGYVSFEEFKKMMTNKSGNNSQA 167

BLAST of Cp4.1LG04g13590 vs. ExPASy Swiss-Prot
Match: Q0DJV6 (Probable calcium-binding protein CML18 OS=Oryza sativa subsp. japonica OX=39947 GN=CML18 PE=2 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 6.7e-35
Identity = 77/148 (52.03%), Postives = 102/148 (68.92%), Query Frame = 0

Query: 31  AELRKVFDRFDANGDGKISLSELDSVLKSLGSSVPYDELRAVMEDLDTDKDGFINIDEFA 90
           AEL +VF R+DANGDGKIS  EL SVL++LG+ +   E+R +M+++D+D+DGF+++ EFA
Sbjct: 4   AELEQVFRRYDANGDGKISAEELASVLRALGAPLGPGEVRRMMDEMDSDRDGFVDLSEFA 63

Query: 91  VFCKEPMASN-----------EAGASELRDAFDLYDQDHNGLISQSELHLVLNRLGITCS 150
            F   P  ++            A  +ELR+AF +YD D NG IS  ELH VL +LG  CS
Sbjct: 64  AFHCGPTPAHGGKGGDAKDQEAASEAELREAFRMYDADSNGKISARELHRVLRQLGDKCS 123

Query: 151 KEDCQRMIHSVDSDGDGNVNFEEFRKMM 168
             DC RMI SVD+DGDG VNF+EF+KMM
Sbjct: 124 VADCSRMIRSVDADGDGCVNFDEFKKMM 151

BLAST of Cp4.1LG04g13590 vs. ExPASy Swiss-Prot
Match: Q9C8Y1 (Probable calcium-binding protein CML23 OS=Arabidopsis thaliana OX=3702 GN=CML23 PE=2 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.5e-34
Identity = 73/143 (51.05%), Postives = 102/143 (71.33%), Query Frame = 0

Query: 32  ELRKVFDRFDANGDGKISLSELDSVLKSLGSSVPYDELRAVMEDLDTDKDGFINIDEF-A 91
           +++KVF RFD N DGKIS+ EL  V+ +L  +   +E +A+M++ D D +GFI++DEF A
Sbjct: 15  DIKKVFQRFDKNNDGKISIDELKDVIGALSPNASQEETKAMMKEFDLDGNGFIDLDEFVA 74

Query: 92  VFCKEPMASNEAGASELRDAFDLYDQDHNGLISQSELHLVLNRLGITCSKEDCQRMIHSV 151
           +F     +SN +   +L++AFDLYD D NG IS +ELH V+  LG  CS +DCQRMI+ V
Sbjct: 75  LFQISDQSSNNSAIRDLKEAFDLYDLDRNGRISANELHSVMKNLGEKCSIQDCQRMINKV 134

Query: 152 DSDGDGNVNFEEFRKMMSNNSNS 174
           DSDGDG V+FEEF+KMM  N ++
Sbjct: 135 DSDGDGCVDFEEFKKMMMINGSA 157

BLAST of Cp4.1LG04g13590 vs. NCBI nr
Match: XP_023529417.1 (probable calcium-binding protein CML27 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 364 bits (934), Expect = 9.57e-127
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0

Query: 1   MATDSNQIAASNSDTEQVLKSKPSFLLQDNAELRKVFDRFDANGDGKISLSELDSVLKSL 60
           MATDSNQIAASNSDTEQVLKSKPSFLLQDNAELRKVFDRFDANGDGKISLSELDSVLKSL
Sbjct: 1   MATDSNQIAASNSDTEQVLKSKPSFLLQDNAELRKVFDRFDANGDGKISLSELDSVLKSL 60

Query: 61  GSSVPYDELRAVMEDLDTDKDGFINIDEFAVFCKEPMASNEAGASELRDAFDLYDQDHNG 120
           GSSVPYDELRAVMEDLDTDKDGFINIDEFAVFCKEPMASNEAGASELRDAFDLYDQDHNG
Sbjct: 61  GSSVPYDELRAVMEDLDTDKDGFINIDEFAVFCKEPMASNEAGASELRDAFDLYDQDHNG 120

Query: 121 LISQSELHLVLNRLGITCSKEDCQRMIHSVDSDGDGNVNFEEFRKMMSNNSNSEAPNQNG 180
           LISQSELHLVLNRLGITCSKEDCQRMIHSVDSDGDGNVNFEEFRKMMSNNSNSEAPNQNG
Sbjct: 121 LISQSELHLVLNRLGITCSKEDCQRMIHSVDSDGDGNVNFEEFRKMMSNNSNSEAPNQNG 180

Query: 181 TAATAP 186
           TAATAP
Sbjct: 181 TAATAP 186

BLAST of Cp4.1LG04g13590 vs. NCBI nr
Match: XP_022933917.1 (probable calcium-binding protein CML27 [Cucurbita moschata] >KAG7021647.1 putative calcium-binding protein CML27, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 361 bits (927), Expect = 1.12e-125
Identity = 184/186 (98.92%), Postives = 185/186 (99.46%), Query Frame = 0

Query: 1   MATDSNQIAASNSDTEQVLKSKPSFLLQDNAELRKVFDRFDANGDGKISLSELDSVLKSL 60
           MATDSNQI ASN+DTEQVLKSKPSFLLQDNAELRKVFDRFDANGDGKISLSELDSVLKSL
Sbjct: 1   MATDSNQITASNADTEQVLKSKPSFLLQDNAELRKVFDRFDANGDGKISLSELDSVLKSL 60

Query: 61  GSSVPYDELRAVMEDLDTDKDGFINIDEFAVFCKEPMASNEAGASELRDAFDLYDQDHNG 120
           GSSVPYDELRAVMEDLDTDKDGFINIDEFAVFCKEPMASNEAGASELRDAFDLYDQDHNG
Sbjct: 61  GSSVPYDELRAVMEDLDTDKDGFINIDEFAVFCKEPMASNEAGASELRDAFDLYDQDHNG 120

Query: 121 LISQSELHLVLNRLGITCSKEDCQRMIHSVDSDGDGNVNFEEFRKMMSNNSNSEAPNQNG 180
           LISQSELHLVLNRLGITCSKEDCQRMIHSVDSDGDGNVNFEEFRKMMSNNSNSEAPNQNG
Sbjct: 121 LISQSELHLVLNRLGITCSKEDCQRMIHSVDSDGDGNVNFEEFRKMMSNNSNSEAPNQNG 180

Query: 181 TAATAP 186
           TAATAP
Sbjct: 181 TAATAP 186

BLAST of Cp4.1LG04g13590 vs. NCBI nr
Match: KAG6587683.1 (putative calcium-binding protein CML27, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 358 bits (918), Expect = 2.63e-124
Identity = 183/186 (98.39%), Postives = 184/186 (98.92%), Query Frame = 0

Query: 1   MATDSNQIAASNSDTEQVLKSKPSFLLQDNAELRKVFDRFDANGDGKISLSELDSVLKSL 60
           MATDSNQI ASN+DTEQVLKSKPSFLLQDNAELRKVFDRFDANGDGKISLSELDSVLKSL
Sbjct: 1   MATDSNQITASNADTEQVLKSKPSFLLQDNAELRKVFDRFDANGDGKISLSELDSVLKSL 60

Query: 61  GSSVPYDELRAVMEDLDTDKDGFINIDEFAVFCKEPMASNEAGASELRDAFDLYDQDHNG 120
           GSSVP DELRAVMEDLDTDKDGFINIDEFAVFCKEPMASNEAGASELRDAFDLYDQDHNG
Sbjct: 61  GSSVPNDELRAVMEDLDTDKDGFINIDEFAVFCKEPMASNEAGASELRDAFDLYDQDHNG 120

Query: 121 LISQSELHLVLNRLGITCSKEDCQRMIHSVDSDGDGNVNFEEFRKMMSNNSNSEAPNQNG 180
           LISQSELHLVLNRLGITCSKEDCQRMIHSVDSDGDGNVNFEEFRKMMSNNSNSEAPNQNG
Sbjct: 121 LISQSELHLVLNRLGITCSKEDCQRMIHSVDSDGDGNVNFEEFRKMMSNNSNSEAPNQNG 180

Query: 181 TAATAP 186
           TAATAP
Sbjct: 181 TAATAP 186

BLAST of Cp4.1LG04g13590 vs. NCBI nr
Match: XP_023003784.1 (probable calcium-binding protein CML27 [Cucurbita maxima])

HSP 1 Score: 356 bits (914), Expect = 1.07e-123
Identity = 182/186 (97.85%), Postives = 183/186 (98.39%), Query Frame = 0

Query: 1   MATDSNQIAASNSDTEQVLKSKPSFLLQDNAELRKVFDRFDANGDGKISLSELDSVLKSL 60
           MATD NQIAASNSDTEQVLKSKPSFLLQDNAELRKVFDRFDANGDGKISLSELDSVLKS 
Sbjct: 1   MATDLNQIAASNSDTEQVLKSKPSFLLQDNAELRKVFDRFDANGDGKISLSELDSVLKSS 60

Query: 61  GSSVPYDELRAVMEDLDTDKDGFINIDEFAVFCKEPMASNEAGASELRDAFDLYDQDHNG 120
           GSSVPYDELRAVMEDLDTDKDGFINIDEFAVFCKEP+ASNEAGASELRDAFDLYDQDHNG
Sbjct: 61  GSSVPYDELRAVMEDLDTDKDGFINIDEFAVFCKEPIASNEAGASELRDAFDLYDQDHNG 120

Query: 121 LISQSELHLVLNRLGITCSKEDCQRMIHSVDSDGDGNVNFEEFRKMMSNNSNSEAPNQNG 180
           LISQSELHLVLNRLGITCSKEDCQRMIHSVDSDGDGNVNFEEFRKMMSNNSNSE PNQNG
Sbjct: 121 LISQSELHLVLNRLGITCSKEDCQRMIHSVDSDGDGNVNFEEFRKMMSNNSNSEVPNQNG 180

Query: 181 TAATAP 186
           TAATAP
Sbjct: 181 TAATAP 186

BLAST of Cp4.1LG04g13590 vs. NCBI nr
Match: XP_038878467.1 (probable calcium-binding protein CML27 [Benincasa hispida])

HSP 1 Score: 321 bits (822), Expect = 1.14e-109
Identity = 161/186 (86.56%), Postives = 173/186 (93.01%), Query Frame = 0

Query: 1   MATDSNQIAASNSDTEQVLKSKPSFLLQDNAELRKVFDRFDANGDGKISLSELDSVLKSL 60
           MATD NQI ASNSD +QV K KPS  LQDN ELRKVF+RFDANGDGKIS+SELDSVLKSL
Sbjct: 1   MATDPNQIPASNSDADQVSKPKPSVFLQDNEELRKVFERFDANGDGKISISELDSVLKSL 60

Query: 61  GSSVPYDELRAVMEDLDTDKDGFINIDEFAVFCKEPMASNEAGASELRDAFDLYDQDHNG 120
           GSS+PY+ELR+VMEDLD+DKDG+INIDEFA FCKEPMAS+EAGASELRDAFDLYDQDHNG
Sbjct: 61  GSSIPYEELRSVMEDLDSDKDGYINIDEFAAFCKEPMASDEAGASELRDAFDLYDQDHNG 120

Query: 121 LISQSELHLVLNRLGITCSKEDCQRMIHSVDSDGDGNVNFEEFRKMMSNNSNSEAPNQNG 180
           LIS SELHLVLNRLGI+CSKEDCQRMIHSVDSDGDGNVNFEEFRKMM+ NSNS+A NQNG
Sbjct: 121 LISHSELHLVLNRLGISCSKEDCQRMIHSVDSDGDGNVNFEEFRKMMTANSNSKAANQNG 180

Query: 181 TAATAP 186
           TAA AP
Sbjct: 181 TAAAAP 186

BLAST of Cp4.1LG04g13590 vs. ExPASy TrEMBL
Match: A0A6J1F164 (probable calcium-binding protein CML27 OS=Cucurbita moschata OX=3662 GN=LOC111441185 PE=4 SV=1)

HSP 1 Score: 361 bits (927), Expect = 5.41e-126
Identity = 184/186 (98.92%), Postives = 185/186 (99.46%), Query Frame = 0

Query: 1   MATDSNQIAASNSDTEQVLKSKPSFLLQDNAELRKVFDRFDANGDGKISLSELDSVLKSL 60
           MATDSNQI ASN+DTEQVLKSKPSFLLQDNAELRKVFDRFDANGDGKISLSELDSVLKSL
Sbjct: 1   MATDSNQITASNADTEQVLKSKPSFLLQDNAELRKVFDRFDANGDGKISLSELDSVLKSL 60

Query: 61  GSSVPYDELRAVMEDLDTDKDGFINIDEFAVFCKEPMASNEAGASELRDAFDLYDQDHNG 120
           GSSVPYDELRAVMEDLDTDKDGFINIDEFAVFCKEPMASNEAGASELRDAFDLYDQDHNG
Sbjct: 61  GSSVPYDELRAVMEDLDTDKDGFINIDEFAVFCKEPMASNEAGASELRDAFDLYDQDHNG 120

Query: 121 LISQSELHLVLNRLGITCSKEDCQRMIHSVDSDGDGNVNFEEFRKMMSNNSNSEAPNQNG 180
           LISQSELHLVLNRLGITCSKEDCQRMIHSVDSDGDGNVNFEEFRKMMSNNSNSEAPNQNG
Sbjct: 121 LISQSELHLVLNRLGITCSKEDCQRMIHSVDSDGDGNVNFEEFRKMMSNNSNSEAPNQNG 180

Query: 181 TAATAP 186
           TAATAP
Sbjct: 181 TAATAP 186

BLAST of Cp4.1LG04g13590 vs. ExPASy TrEMBL
Match: A0A6J1KUB4 (probable calcium-binding protein CML27 OS=Cucurbita maxima OX=3661 GN=LOC111497259 PE=4 SV=1)

HSP 1 Score: 356 bits (914), Expect = 5.20e-124
Identity = 182/186 (97.85%), Postives = 183/186 (98.39%), Query Frame = 0

Query: 1   MATDSNQIAASNSDTEQVLKSKPSFLLQDNAELRKVFDRFDANGDGKISLSELDSVLKSL 60
           MATD NQIAASNSDTEQVLKSKPSFLLQDNAELRKVFDRFDANGDGKISLSELDSVLKS 
Sbjct: 1   MATDLNQIAASNSDTEQVLKSKPSFLLQDNAELRKVFDRFDANGDGKISLSELDSVLKSS 60

Query: 61  GSSVPYDELRAVMEDLDTDKDGFINIDEFAVFCKEPMASNEAGASELRDAFDLYDQDHNG 120
           GSSVPYDELRAVMEDLDTDKDGFINIDEFAVFCKEP+ASNEAGASELRDAFDLYDQDHNG
Sbjct: 61  GSSVPYDELRAVMEDLDTDKDGFINIDEFAVFCKEPIASNEAGASELRDAFDLYDQDHNG 120

Query: 121 LISQSELHLVLNRLGITCSKEDCQRMIHSVDSDGDGNVNFEEFRKMMSNNSNSEAPNQNG 180
           LISQSELHLVLNRLGITCSKEDCQRMIHSVDSDGDGNVNFEEFRKMMSNNSNSE PNQNG
Sbjct: 121 LISQSELHLVLNRLGITCSKEDCQRMIHSVDSDGDGNVNFEEFRKMMSNNSNSEVPNQNG 180

Query: 181 TAATAP 186
           TAATAP
Sbjct: 181 TAATAP 186

BLAST of Cp4.1LG04g13590 vs. ExPASy TrEMBL
Match: A0A6J1E0A3 (probable calcium-binding protein CML27 OS=Cucurbita moschata OX=3662 GN=LOC111429663 PE=4 SV=1)

HSP 1 Score: 298 bits (764), Expect = 3.79e-101
Identity = 149/186 (80.11%), Postives = 165/186 (88.71%), Query Frame = 0

Query: 1   MATDSNQIAASNSDTEQVLKSKPSFLLQDNAELRKVFDRFDANGDGKISLSELDSVLKSL 60
           MATDSN I +SNSD +Q+ K KPS LL +N ELRKVFDRFD+NGDG+IS++ELDSVLKSL
Sbjct: 1   MATDSNPITSSNSDADQIAKPKPSGLLHENEELRKVFDRFDSNGDGRISITELDSVLKSL 60

Query: 61  GSSVPYDELRAVMEDLDTDKDGFINIDEFAVFCKEPMASNEAGASELRDAFDLYDQDHNG 120
           GS++PY+ELR VMEDLD DKDGFINIDEFA FCKEPMAS+EAG SELRDAFDLYDQDHNG
Sbjct: 61  GSAIPYEELRGVMEDLDYDKDGFINIDEFAAFCKEPMASDEAGLSELRDAFDLYDQDHNG 120

Query: 121 LISQSELHLVLNRLGITCSKEDCQRMIHSVDSDGDGNVNFEEFRKMMSNNSNSEAPNQNG 180
           LIS SELHLVL RLGI  S EDCQRMIH+VDSDGDGNVNFEEFRKMMS+ + S+APNQNG
Sbjct: 121 LISHSELHLVLTRLGINYSIEDCQRMIHTVDSDGDGNVNFEEFRKMMSDTNKSKAPNQNG 180

Query: 181 TAATAP 186
           TAA  P
Sbjct: 181 TAAAGP 186

BLAST of Cp4.1LG04g13590 vs. ExPASy TrEMBL
Match: A0A6J1JD54 (probable calcium-binding protein CML27 OS=Cucurbita maxima OX=3661 GN=LOC111485714 PE=4 SV=1)

HSP 1 Score: 295 bits (754), Expect = 1.27e-99
Identity = 147/186 (79.03%), Postives = 164/186 (88.17%), Query Frame = 0

Query: 1   MATDSNQIAASNSDTEQVLKSKPSFLLQDNAELRKVFDRFDANGDGKISLSELDSVLKSL 60
           MATDSN I +SNSD +Q+ K KPS LL +N ELRKVFDRFD+NGDG+IS++ELDSVLKSL
Sbjct: 1   MATDSNPIPSSNSDADQITKPKPSGLLHENEELRKVFDRFDSNGDGRISITELDSVLKSL 60

Query: 61  GSSVPYDELRAVMEDLDTDKDGFINIDEFAVFCKEPMASNEAGASELRDAFDLYDQDHNG 120
           GS++PY+ELR +MEDLD DKDGFINIDEFA FCKEPMAS+EAG SELRDAFDLYDQDHNG
Sbjct: 61  GSAIPYEELRGIMEDLDYDKDGFINIDEFAAFCKEPMASDEAGLSELRDAFDLYDQDHNG 120

Query: 121 LISQSELHLVLNRLGITCSKEDCQRMIHSVDSDGDGNVNFEEFRKMMSNNSNSEAPNQNG 180
           LIS SELHLVL RLGI  S EDCQRMIH+VDSDGDGNVNFEEFRKMMS+ + S+APNQN 
Sbjct: 121 LISHSELHLVLTRLGINYSIEDCQRMIHTVDSDGDGNVNFEEFRKMMSDANKSKAPNQNA 180

Query: 181 TAATAP 186
           TAA  P
Sbjct: 181 TAAAGP 186

BLAST of Cp4.1LG04g13590 vs. ExPASy TrEMBL
Match: A0A5D3DXJ8 (Putative calcium-binding protein CML27 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G001210 PE=4 SV=1)

HSP 1 Score: 285 bits (728), Expect = 1.24e-95
Identity = 143/188 (76.06%), Postives = 168/188 (89.36%), Query Frame = 0

Query: 1   MATDSNQIAASNSDTEQVLKSKPSFLLQDNAELRKVFDRFDANGDGKISLSELDSVLKSL 60
           MATD NQI  S SD +Q+ K KPS LL+D+ ELRKVF+RFDANGDGKIS++ELD+VL SL
Sbjct: 1   MATDPNQIPTSQSDADQIAKQKPSVLLEDDDELRKVFERFDANGDGKISITELDAVLTSL 60

Query: 61  G--SSVPYDELRAVMEDLDTDKDGFINIDEFAVFCKEPMASNEAGASELRDAFDLYDQDH 120
              S++P +ELR+VM+DLD+DKDG+INI+EFA FCK+PMAS+EAGA+ELRDAFDLYDQD 
Sbjct: 61  TLKSAIPLEELRSVMDDLDSDKDGYINIEEFAAFCKKPMASDEAGAAELRDAFDLYDQDR 120

Query: 121 NGLISQSELHLVLNRLGITCSKEDCQRMIHSVDSDGDGNVNFEEFRKMMSNNSNSEAPNQ 180
           NGLISQSELHLVLNRLGI+CSKEDCQ+MI+SVDSDGDGNVNFEEFRKMM++NS S+A  Q
Sbjct: 121 NGLISQSELHLVLNRLGISCSKEDCQKMINSVDSDGDGNVNFEEFRKMMTDNSKSKAAKQ 180

Query: 181 NGTAATAP 186
           NGTAA AP
Sbjct: 181 NGTAAAAP 188

BLAST of Cp4.1LG04g13590 vs. TAIR 10
Match: AT1G18210.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 184.5 bits (467), Expect = 7.8e-47
Identity = 100/179 (55.87%), Postives = 133/179 (74.30%), Query Frame = 0

Query: 8   IAASNSDTEQVLKSKPSFLLQDNA---ELRKVFDRFDANGDGKISLSELDSVLKSLGSSV 67
           +A++N +T     +KP+    D A   EL+KVFD+FD+NGDGKIS+ EL  V K++G+S 
Sbjct: 1   MASANPET-----AKPTPATVDMANPEELKKVFDQFDSNGDGKISVLELGGVFKAMGTSY 60

Query: 68  PYDELRAVMEDLDTDKDGFINIDEFAVFCKEPMASNEAGASELRDAFDLYDQDHNGLISQ 127
              EL  V+E++DTD+DG+IN+DEF+  C+     + + A+E+RDAFDLYDQD NGLIS 
Sbjct: 61  TETELNRVLEEVDTDRDGYINLDEFSTLCR-----SSSSAAEIRDAFDLYDQDKNGLISA 120

Query: 128 SELHLVLNRLGITCSKEDCQRMIHSVDSDGDGNVNFEEFRKMMSNNSNSEAPNQNGTAA 184
           SELH VLNRLG++CS EDC RMI  VD+DGDGNVNFEEF+KMM+++S     N NG+AA
Sbjct: 121 SELHQVLNRLGMSCSVEDCTRMIGPVDADGDGNVNFEEFQKMMTSSS---LLNSNGSAA 166

BLAST of Cp4.1LG04g13590 vs. TAIR 10
Match: AT1G18210.2 (Calcium-binding EF-hand family protein )

HSP 1 Score: 184.5 bits (467), Expect = 7.8e-47
Identity = 100/179 (55.87%), Postives = 133/179 (74.30%), Query Frame = 0

Query: 8   IAASNSDTEQVLKSKPSFLLQDNA---ELRKVFDRFDANGDGKISLSELDSVLKSLGSSV 67
           +A++N +T     +KP+    D A   EL+KVFD+FD+NGDGKIS+ EL  V K++G+S 
Sbjct: 1   MASANPET-----AKPTPATVDMANPEELKKVFDQFDSNGDGKISVLELGGVFKAMGTSY 60

Query: 68  PYDELRAVMEDLDTDKDGFINIDEFAVFCKEPMASNEAGASELRDAFDLYDQDHNGLISQ 127
              EL  V+E++DTD+DG+IN+DEF+  C+     + + A+E+RDAFDLYDQD NGLIS 
Sbjct: 61  TETELNRVLEEVDTDRDGYINLDEFSTLCR-----SSSSAAEIRDAFDLYDQDKNGLISA 120

Query: 128 SELHLVLNRLGITCSKEDCQRMIHSVDSDGDGNVNFEEFRKMMSNNSNSEAPNQNGTAA 184
           SELH VLNRLG++CS EDC RMI  VD+DGDGNVNFEEF+KMM+++S     N NG+AA
Sbjct: 121 SELHQVLNRLGMSCSVEDCTRMIGPVDADGDGNVNFEEFQKMMTSSS---LLNSNGSAA 166

BLAST of Cp4.1LG04g13590 vs. TAIR 10
Match: AT1G73630.1 (EF hand calcium-binding protein family )

HSP 1 Score: 177.6 bits (449), Expect = 9.5e-45
Identity = 92/159 (57.86%), Postives = 119/159 (74.84%), Query Frame = 0

Query: 11  SNSDTEQVLKSKPSFLLQDNAELRKVFDRFDANGDGKISLSELDSVLKSLGSSVPYDELR 70
           +N++ E   KS        + EL+KVFD+FDANGDGKIS+SEL +V KS+G+S   +EL 
Sbjct: 2   ANTNLESTNKSTTP---STDMELKKVFDKFDANGDGKISVSELGNVFKSMGTSYTEEELN 61

Query: 71  AVMEDLDTDKDGFINIDEFAVFCKEPMASNEAGASELRDAFDLYDQDHNGLISQSELHLV 130
            V++++D D DGFIN +EFA  C+     + + A E+R+AFDLYDQ+ NGLIS SE+H V
Sbjct: 62  RVLDEIDIDCDGFINQEEFATICR-----SSSSAVEIREAFDLYDQNKNGLISSSEIHKV 121

Query: 131 LNRLGITCSKEDCQRMIHSVDSDGDGNVNFEEFRKMMSN 170
           LNRLG+TCS EDC RMI  VD+DGDGNVNFEEF+KMMS+
Sbjct: 122 LNRLGMTCSVEDCVRMIGHVDTDGDGNVNFEEFQKMMSS 152

BLAST of Cp4.1LG04g13590 vs. TAIR 10
Match: AT1G66400.1 (calmodulin like 23 )

HSP 1 Score: 146.7 bits (369), Expect = 1.8e-35
Identity = 73/143 (51.05%), Postives = 102/143 (71.33%), Query Frame = 0

Query: 32  ELRKVFDRFDANGDGKISLSELDSVLKSLGSSVPYDELRAVMEDLDTDKDGFINIDEF-A 91
           +++KVF RFD N DGKIS+ EL  V+ +L  +   +E +A+M++ D D +GFI++DEF A
Sbjct: 15  DIKKVFQRFDKNNDGKISIDELKDVIGALSPNASQEETKAMMKEFDLDGNGFIDLDEFVA 74

Query: 92  VFCKEPMASNEAGASELRDAFDLYDQDHNGLISQSELHLVLNRLGITCSKEDCQRMIHSV 151
           +F     +SN +   +L++AFDLYD D NG IS +ELH V+  LG  CS +DCQRMI+ V
Sbjct: 75  LFQISDQSSNNSAIRDLKEAFDLYDLDRNGRISANELHSVMKNLGEKCSIQDCQRMINKV 134

Query: 152 DSDGDGNVNFEEFRKMMSNNSNS 174
           DSDGDG V+FEEF+KMM  N ++
Sbjct: 135 DSDGDGCVDFEEFKKMMMINGSA 157

BLAST of Cp4.1LG04g13590 vs. TAIR 10
Match: AT5G37770.1 (EF hand calcium-binding protein family )

HSP 1 Score: 135.6 bits (340), Expect = 4.1e-32
Identity = 68/145 (46.90%), Postives = 96/145 (66.21%), Query Frame = 0

Query: 32  ELRKVFDRFDANGDGKISLSELDSVLKSLGSSVPYDELRAVMEDLDTDKDGFINIDEFAV 91
           +++KVF RFD NGDGKIS+ EL  V+++L  +   +E   +M+  D D +GFI++DEF  
Sbjct: 17  DIKKVFQRFDKNGDGKISVDELKEVIRALSPTASPEETVTMMKQFDLDGNGFIDLDEFVA 76

Query: 92  FCKEPM---ASNEAGASELRDAFDLYDQDHNGLISQSELHLVLNRLGITCSKEDCQRMIH 151
             +  +    +N    S+L++AF+LYD D NG IS  ELH V+  LG  CS +DC++MI 
Sbjct: 77  LFQIGIGGGGNNRNDVSDLKEAFELYDLDGNGRISAKELHSVMKNLGEKCSVQDCKKMIS 136

Query: 152 SVDSDGDGNVNFEEFRKMMSNNSNS 174
            VD DGDG VNF+EF+KMMSN   +
Sbjct: 137 KVDIDGDGCVNFDEFKKMMSNGGGA 161

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9LE221.1e-4555.87Probable calcium-binding protein CML27 OS=Arabidopsis thaliana OX=3702 GN=CML27 ... [more]
Q9C9U81.3e-4357.86Probable calcium-binding protein CML26 OS=Arabidopsis thaliana OX=3702 GN=CML26 ... [more]
Q9M7R01.8e-4357.31Calcium-binding allergen Ole e 8 OS=Olea europaea OX=4146 PE=1 SV=1[more]
Q0DJV66.7e-3552.03Probable calcium-binding protein CML18 OS=Oryza sativa subsp. japonica OX=39947 ... [more]
Q9C8Y12.5e-3451.05Probable calcium-binding protein CML23 OS=Arabidopsis thaliana OX=3702 GN=CML23 ... [more]
Match NameE-valueIdentityDescription
XP_023529417.19.57e-127100.00probable calcium-binding protein CML27 [Cucurbita pepo subsp. pepo][more]
XP_022933917.11.12e-12598.92probable calcium-binding protein CML27 [Cucurbita moschata] >KAG7021647.1 putati... [more]
KAG6587683.12.63e-12498.39putative calcium-binding protein CML27, partial [Cucurbita argyrosperma subsp. s... [more]
XP_023003784.11.07e-12397.85probable calcium-binding protein CML27 [Cucurbita maxima][more]
XP_038878467.11.14e-10986.56probable calcium-binding protein CML27 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
A0A6J1F1645.41e-12698.92probable calcium-binding protein CML27 OS=Cucurbita moschata OX=3662 GN=LOC11144... [more]
A0A6J1KUB45.20e-12497.85probable calcium-binding protein CML27 OS=Cucurbita maxima OX=3661 GN=LOC1114972... [more]
A0A6J1E0A33.79e-10180.11probable calcium-binding protein CML27 OS=Cucurbita moschata OX=3662 GN=LOC11142... [more]
A0A6J1JD541.27e-9979.03probable calcium-binding protein CML27 OS=Cucurbita maxima OX=3661 GN=LOC1114857... [more]
A0A5D3DXJ81.24e-9576.06Putative calcium-binding protein CML27 OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
Match NameE-valueIdentityDescription
AT1G18210.17.8e-4755.87Calcium-binding EF-hand family protein [more]
AT1G18210.27.8e-4755.87Calcium-binding EF-hand family protein [more]
AT1G73630.19.5e-4557.86EF hand calcium-binding protein family [more]
AT1G66400.11.8e-3551.05calmodulin like 23 [more]
AT5G37770.14.1e-3246.90EF hand calcium-binding protein family [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 32..60
e-value: 2.6E-6
score: 37.0
coord: 106..134
e-value: 2.3E-4
score: 30.5
coord: 142..170
e-value: 1.2E-4
score: 31.5
coord: 68..96
e-value: 7.4E-5
score: 32.1
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 32..93
e-value: 6.5E-14
score: 52.1
coord: 105..168
e-value: 5.6E-14
score: 52.3
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 138..173
score: 13.620752
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 28..63
score: 15.461849
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 102..137
score: 12.78389
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 64..99
score: 12.114401
IPR002048EF-hand domainCDDcd00051EFhcoord: 106..168
e-value: 9.39359E-21
score: 79.1289
IPR002048EF-hand domainCDDcd00051EFhcoord: 32..90
e-value: 9.64851E-18
score: 71.4249
NoneNo IPR availableGENE3D1.10.238.10coord: 103..185
e-value: 5.5E-23
score: 82.7
NoneNo IPR availableGENE3D1.10.238.10coord: 2..102
e-value: 9.3E-22
score: 79.6
NoneNo IPR availablePANTHERPTHR10891:SF814CALCIUM-BINDING PROTEIN CML26-RELATEDcoord: 19..171
NoneNo IPR availablePANTHERPTHR10891EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEINcoord: 19..171
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 41..53
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 77..89
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 115..127
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 151..163
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 30..178

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g13590.1Cp4.1LG04g13590.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding