Cp4.1LG04g13270 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG04g13270
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionTransmembrane protein 230
LocationCp4.1LG04: 10958040 .. 10959194 (+)
RNA-Seq ExpressionCp4.1LG04g13270
SyntenyCp4.1LG04g13270
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAGGATTAATTAAGATAATTATAAAGCTTTTACTGACGCTGACGTGGAAGTTTACGCCTTTCTTTTCACTCCACCTCCTCGCGGAGTCAAAAACAGGTAGGCGTCTCTTTGCTTCAAAAAAACAAAATTCCACCGTCGTCGCCGCCGATTTCTCTACCAAATCCCGGCACCTATTTTTCTGCGGATCCAAGCTTCAACACCTTCTTCTTCCTTCAGCCCTAGATCTCCGTTTATTACAGAGAAAGATGGCGTACGTGGACCATGCGTTTTCGATAACAGACGAAGACATTATGATGGATTCTCCCTTCACCGTCAACAATCGGCCTCCTATCAAGGAGATCGCTCTTGCTGTTTCTCTTCTCTTTTTTGGAATGATTGGAATCATCGTTGGTATCTTCATGGCCAGTAATCGAGTCGGTGGTGATCGTGCTCACGGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTGCTTTGTGTTCTTCTTCTAATTTTGCCCTAGTTCGAATGTTAATAAGTTTTGCTTTGTTCTTGATGATTTTCAGGGGTGTTCTTCTCGTTGTTGGGAGCTCTCTTGTTTATTCCGGGTTTCTATTACACGCGGATTGCTTACTATGCGTACAAGGGTTACAAGGGTTTCTCCTTCTCCAACATACCGCCTGTCTAAATCCTCCAAGTCCAACCACTTCTCTACACTTGTACATATTTTCTTCTCCAGATTTCTTCACTCTCTACGCTGTTCCCCCCTCCCGCTTCTCCTTTTGACTACAACTAACACTATCTGTTTACTATCGATGGAGTGTGAAGGATTGTATGTGAATTTGAGTTGTGCATTATCGACATAGTTATTCTTCTTTAAGCTTTACTTCCTAGTCGTCGTTCCTACAGGCGTTTCAATATACATGGCGAATTTCGGAGTATAATCGAGTCTTTTATCTATATAATCTGAAGTTTTATTACTTTCTTGCTCTAGTTTGATTGTTGATTTGAACAAATTCGAGTCTATAATGCGAAAAAATAATACAAATTTCAATTTATCTAGCCAGATTCAAGTCTCTCCAGGACTTACCTAGCTTTGGAAATATTAAAGAGGTATCCACTTTCTAAATGCACTTCAATTTTATTC

mRNA sequence

TAGGATTAATTAAGATAATTATAAAGCTTTTACTGACGCTGACGTGGAAGTTTACGCCTTTCTTTTCACTCCACCTCCTCGCGGAGTCAAAAACAGGTAGGCGTCTCTTTGCTTCAAAAAAACAAAATTCCACCGTCGTCGCCGCCGATTTCTCTACCAAATCCCGGCACCTATTTTTCTGCGGATCCAAGCTTCAACACCTTCTTCTTCCTTCAGCCCTAGATCTCCGTTTATTACAGAGAAAGATGGCGTACGTGGACCATGCGTTTTCGATAACAGACGAAGACATTATGATGGATTCTCCCTTCACCGTCAACAATCGGCCTCCTATCAAGGAGATCGCTCTTGCTGTTTCTCTTCTCTTTTTTGGAATGATTGGAATCATCGTTGGTATCTTCATGGCCAGTAATCGAGTCGGTGGTGATCGTGCTCACGGGGTGTTCTTCTCGTTGTTGGGAGCTCTCTTGTTTATTCCGGGTTTCTATTACACGCGGATTGCTTACTATGCGTACAAGGGTTACAAGGGTTTCTCCTTCTCCAACATACCGCCTGTCTAAATCCTCCAAGTCCAACCACTTCTCTACACTTGTACATATTTTCTTCTCCAGATTTCTTCACTCTCTACGCTGTTCCCCCCTCCCGCTTCTCCTTTTGACTACAACTAACACTATCTGTTTACTATCGATGGAGTGTGAAGGATTGTATGTGAATTTGAGTTGTGCATTATCGACATAGTTATTCTTCTTTAAGCTTTACTTCCTAGTCGTCGTTCCTACAGGCGTTTCAATATACATGGCGAATTTCGGAGTATAATCGAGTCTTTTATCTATATAATCTGAAGTTTTATTACTTTCTTGCTCTAGTTTGATTGTTGATTTGAACAAATTCGAGTCTATAATGCGAAAAAATAATACAAATTTCAATTTATCTAGCCAGATTCAAGTCTCTCCAGGACTTACCTAGCTTTGGAAATATTAAAGAGGTATCCACTTTCTAAATGCACTTCAATTTTATTC

Coding sequence (CDS)

ATGGCGTACGTGGACCATGCGTTTTCGATAACAGACGAAGACATTATGATGGATTCTCCCTTCACCGTCAACAATCGGCCTCCTATCAAGGAGATCGCTCTTGCTGTTTCTCTTCTCTTTTTTGGAATGATTGGAATCATCGTTGGTATCTTCATGGCCAGTAATCGAGTCGGTGGTGATCGTGCTCACGGGGTGTTCTTCTCGTTGTTGGGAGCTCTCTTGTTTATTCCGGGTTTCTATTACACGCGGATTGCTTACTATGCGTACAAGGGTTACAAGGGTTTCTCCTTCTCCAACATACCGCCTGTCTAA

Protein sequence

MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIIVGIFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV
Homology
BLAST of Cp4.1LG04g13270 vs. ExPASy Swiss-Prot
Match: Q5R8X3 (Transmembrane protein 230 OS=Pongo abelii OX=9601 GN=TMEM230 PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.8e-10
Identity = 37/77 (48.05%), Postives = 49/77 (63.64%), Query Frame = 0

Query: 28  PIKEIALAVSLLFFGMIGIIVGIFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRI 87
           P K IALA  L   G   II+G  + S  +   G DRA  V   ++G L+F+PGFY+ RI
Sbjct: 42  PYKAIALATGLFLIGAFLIIIGSLLLSGYISKGGADRAIPVL--IIGILVFLPGFYHLRI 101

Query: 88  AYYAYKGYKGFSFSNIP 102
           AYYA KGY+G+S+ +IP
Sbjct: 102 AYYASKGYRGYSYDDIP 116

BLAST of Cp4.1LG04g13270 vs. ExPASy Swiss-Prot
Match: Q5ZLH4 (Transmembrane protein 230 OS=Gallus gallus OX=9031 GN=TMEM230 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.1e-10
Identity = 37/77 (48.05%), Postives = 50/77 (64.94%), Query Frame = 0

Query: 28  PIKEIALAVSLLFFGMIGIIVGIFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRI 87
           P K IALAV L   G   II+G  + +  +   G DRA  V   ++G L+F+PGFY+ RI
Sbjct: 42  PYKAIALAVVLFMIGTFLIIIGALLLAGYISKGGTDRAIPVL--IIGILVFLPGFYHLRI 101

Query: 88  AYYAYKGYKGFSFSNIP 102
           AYYA KGY+G+S+ +IP
Sbjct: 102 AYYASKGYRGYSYDDIP 116

BLAST of Cp4.1LG04g13270 vs. ExPASy Swiss-Prot
Match: Q96A57 (Transmembrane protein 230 OS=Homo sapiens OX=9606 GN=TMEM230 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.1e-10
Identity = 37/77 (48.05%), Postives = 49/77 (63.64%), Query Frame = 0

Query: 28  PIKEIALAVSLLFFGMIGIIVGIFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRI 87
           P K IALA  L   G   II+G  + S  +   G DRA  V   ++G L+F+PGFY+ RI
Sbjct: 42  PYKAIALATVLFLIGAFLIIIGSLLLSGYISKGGADRAVPVL--IIGILVFLPGFYHLRI 101

Query: 88  AYYAYKGYKGFSFSNIP 102
           AYYA KGY+G+S+ +IP
Sbjct: 102 AYYASKGYRGYSYDDIP 116

BLAST of Cp4.1LG04g13270 vs. ExPASy Swiss-Prot
Match: Q8CIB6 (Transmembrane protein 230 OS=Mus musculus OX=10090 GN=Tmem230 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.1e-10
Identity = 37/77 (48.05%), Postives = 49/77 (63.64%), Query Frame = 0

Query: 28  PIKEIALAVSLLFFGMIGIIVGIFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRI 87
           P K IALA  L   G   II+G  + S  +   G DRA  V   ++G L+F+PGFY+ RI
Sbjct: 42  PYKAIALATVLFLIGTFLIIIGSLLLSGYISKGGADRAVPVL--IIGILVFLPGFYHLRI 101

Query: 88  AYYAYKGYKGFSFSNIP 102
           AYYA KGY+G+S+ +IP
Sbjct: 102 AYYASKGYRGYSYDDIP 116

BLAST of Cp4.1LG04g13270 vs. ExPASy Swiss-Prot
Match: Q5BJP5 (Transmembrane protein 230 OS=Rattus norvegicus OX=10116 GN=Tmem230 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.1e-10
Identity = 37/77 (48.05%), Postives = 49/77 (63.64%), Query Frame = 0

Query: 28  PIKEIALAVSLLFFGMIGIIVGIFMASNRV---GGDRAHGVFFSLLGALLFIPGFYYTRI 87
           P K IALA  L   G   II+G  + S  +   G DRA  V   ++G L+F+PGFY+ RI
Sbjct: 42  PYKAIALATVLFLIGTFLIIIGSLLLSGYISKGGADRAVPVL--IIGILVFLPGFYHLRI 101

Query: 88  AYYAYKGYKGFSFSNIP 102
           AYYA KGY+G+S+ +IP
Sbjct: 102 AYYASKGYRGYSYDDIP 116

BLAST of Cp4.1LG04g13270 vs. NCBI nr
Match: XP_022931504.1 (transmembrane protein 230-like [Cucurbita moschata] >XP_022972056.1 transmembrane protein 230-like [Cucurbita maxima] >XP_023529399.1 transmembrane protein 230-like [Cucurbita pepo subsp. pepo] >KAG6587719.1 Transmembrane protein 230, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 209 bits (531), Expect = 5.54e-68
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0

Query: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIIVGIFMASNRVGGD 60
           MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIIVGIFMASNRVGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIIVGIFMASNRVGGD 60

Query: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103
           RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

BLAST of Cp4.1LG04g13270 vs. NCBI nr
Match: KAG7021684.1 (Transmembrane protein-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 208 bits (530), Expect = 7.87e-68
Identity = 102/103 (99.03%), Postives = 103/103 (100.00%), Query Frame = 0

Query: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIIVGIFMASNRVGGD 60
           MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGI+VGIFMASNRVGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIVVGIFMASNRVGGD 60

Query: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103
           RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

BLAST of Cp4.1LG04g13270 vs. NCBI nr
Match: XP_038879685.1 (transmembrane protein 230 [Benincasa hispida])

HSP 1 Score: 204 bits (518), Expect = 5.33e-66
Identity = 100/103 (97.09%), Postives = 101/103 (98.06%), Query Frame = 0

Query: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIIVGIFMASNRVGGD 60
           MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLL FGMIGI+VG FMASNRVGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 60

Query: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103
           RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

BLAST of Cp4.1LG04g13270 vs. NCBI nr
Match: XP_008453547.1 (PREDICTED: transmembrane protein 230-like [Cucumis melo])

HSP 1 Score: 202 bits (515), Expect = 1.53e-65
Identity = 100/103 (97.09%), Postives = 100/103 (97.09%), Query Frame = 0

Query: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIIVGIFMASNRVGGD 60
           MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLL FGMIGIIVG FMASNRVGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIIVGAFMASNRVGGD 60

Query: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103
           RAHGVFFSLLG LLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

BLAST of Cp4.1LG04g13270 vs. NCBI nr
Match: XP_004146339.1 (transmembrane protein 230 [Cucumis sativus] >KGN65495.1 hypothetical protein Csa_019721 [Cucumis sativus])

HSP 1 Score: 201 bits (511), Expect = 6.24e-65
Identity = 99/103 (96.12%), Postives = 99/103 (96.12%), Query Frame = 0

Query: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIIVGIFMASNRVGGD 60
           MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLL FGMIGIIVG FMASNRVGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIIVGAFMASNRVGGD 60

Query: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103
           R HGVFFSLLG LLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RVHGVFFSLLGGLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

BLAST of Cp4.1LG04g13270 vs. ExPASy TrEMBL
Match: A0A6J1I4W8 (Transmembrane protein 230 OS=Cucurbita maxima OX=3661 GN=LOC111470698 PE=3 SV=1)

HSP 1 Score: 209 bits (531), Expect = 2.68e-68
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0

Query: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIIVGIFMASNRVGGD 60
           MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIIVGIFMASNRVGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIIVGIFMASNRVGGD 60

Query: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103
           RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

BLAST of Cp4.1LG04g13270 vs. ExPASy TrEMBL
Match: A0A6J1EUE9 (Transmembrane protein 230 OS=Cucurbita moschata OX=3662 GN=LOC111437657 PE=3 SV=1)

HSP 1 Score: 209 bits (531), Expect = 2.68e-68
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0

Query: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIIVGIFMASNRVGGD 60
           MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIIVGIFMASNRVGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIIVGIFMASNRVGGD 60

Query: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103
           RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

BLAST of Cp4.1LG04g13270 vs. ExPASy TrEMBL
Match: A0A1S3BWL2 (Transmembrane protein 230 OS=Cucumis melo OX=3656 GN=LOC103494229 PE=3 SV=1)

HSP 1 Score: 202 bits (515), Expect = 7.41e-66
Identity = 100/103 (97.09%), Postives = 100/103 (97.09%), Query Frame = 0

Query: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIIVGIFMASNRVGGD 60
           MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLL FGMIGIIVG FMASNRVGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIIVGAFMASNRVGGD 60

Query: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103
           RAHGVFFSLLG LLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

BLAST of Cp4.1LG04g13270 vs. ExPASy TrEMBL
Match: A0A0A0LUC1 (Transmembrane protein 230 OS=Cucumis sativus OX=3659 GN=Csa_1G426960 PE=3 SV=1)

HSP 1 Score: 201 bits (511), Expect = 3.02e-65
Identity = 99/103 (96.12%), Postives = 99/103 (96.12%), Query Frame = 0

Query: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIIVGIFMASNRVGGD 60
           MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLL FGMIGIIVG FMASNRVGGD
Sbjct: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIIVGAFMASNRVGGD 60

Query: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103
           R HGVFFSLLG LLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RVHGVFFSLLGGLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

BLAST of Cp4.1LG04g13270 vs. ExPASy TrEMBL
Match: A0A6J1JDX9 (Transmembrane protein 230 OS=Cucurbita maxima OX=3661 GN=LOC111484930 PE=3 SV=1)

HSP 1 Score: 198 bits (503), Expect = 5.02e-64
Identity = 97/103 (94.17%), Postives = 99/103 (96.12%), Query Frame = 0

Query: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIIVGIFMASNRVGGD 60
           MAYVDHAFSI DEDI+MDSPF VNNRPPIKEIALAVSLL FGMIGI+VG FMASNRVGGD
Sbjct: 1   MAYVDHAFSIADEDIVMDSPFPVNNRPPIKEIALAVSLLVFGMIGIVVGAFMASNRVGGD 60

Query: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103
           RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

BLAST of Cp4.1LG04g13270 vs. TAIR 10
Match: AT4G29850.1 (Eukaryotic protein of unknown function (DUF872) )

HSP 1 Score: 178.3 bits (451), Expect = 3.1e-45
Identity = 84/103 (81.55%), Postives = 94/103 (91.26%), Query Frame = 0

Query: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIIVGIFMASNRVGGD 60
           MAYVDHAFSITDEDIM+++ +TVNNRPP+KEIALAV+LL FG +GI+ G FMA NRVGGD
Sbjct: 1   MAYVDHAFSITDEDIMIETSYTVNNRPPVKEIALAVALLVFGTLGIVSGFFMAYNRVGGD 60

Query: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           R HG+FF +LG LLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV
Sbjct: 61  RGHGIFFIVLGCLLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 103

BLAST of Cp4.1LG04g13270 vs. TAIR 10
Match: AT2G19350.1 (Eukaryotic protein of unknown function (DUF872) )

HSP 1 Score: 169.5 bits (428), Expect = 1.4e-42
Identity = 79/103 (76.70%), Postives = 92/103 (89.32%), Query Frame = 0

Query: 1   MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLFFGMIGIIVGIFMASNRVGGD 60
           MAYVDHAFSI+DED+M+ + +TV+NRPP+KEI+LAV LL FG +GI++G FMA NRVGGD
Sbjct: 1   MAYVDHAFSISDEDLMIGTSYTVSNRPPVKEISLAVGLLVFGTLGIVLGFFMAYNRVGGD 60

Query: 61  RAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV 104
           R HG+FF +LG LLFIPGFYYTRIAYYAYKGYKGFSFSNIP V
Sbjct: 61  RGHGIFFIVLGCLLFIPGFYYTRIAYYAYKGYKGFSFSNIPSV 103

BLAST of Cp4.1LG04g13270 vs. TAIR 10
Match: AT3G29170.1 (Eukaryotic protein of unknown function (DUF872) )

HSP 1 Score: 70.1 bits (170), Expect = 1.2e-12
Identity = 35/77 (45.45%), Postives = 51/77 (66.23%), Query Frame = 0

Query: 25  NRPPIKEIALAVSLLFFGMIGIIVGIFMASNRVGGDRAHGVFFSLLGALLFIPGFYYTRI 84
           +R P K IALAV LLF G + +++  F+    + GD + G    +LG L F+PGFY TRI
Sbjct: 43  DRVPWKSIALAVFLLFLGCLLLLLSFFIFIGHMEGDSSQGYALLVLGILTFLPGFYETRI 102

Query: 85  AYYAYKGYKGFSFSNIP 102
           AYY+++G +G+ F+ IP
Sbjct: 103 AYYSWRGAEGYRFAAIP 119

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q5R8X31.8e-1048.05Transmembrane protein 230 OS=Pongo abelii OX=9601 GN=TMEM230 PE=2 SV=1[more]
Q5ZLH43.1e-1048.05Transmembrane protein 230 OS=Gallus gallus OX=9031 GN=TMEM230 PE=2 SV=1[more]
Q96A573.1e-1048.05Transmembrane protein 230 OS=Homo sapiens OX=9606 GN=TMEM230 PE=1 SV=1[more]
Q8CIB63.1e-1048.05Transmembrane protein 230 OS=Mus musculus OX=10090 GN=Tmem230 PE=1 SV=1[more]
Q5BJP53.1e-1048.05Transmembrane protein 230 OS=Rattus norvegicus OX=10116 GN=Tmem230 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
XP_022931504.15.54e-68100.00transmembrane protein 230-like [Cucurbita moschata] >XP_022972056.1 transmembran... [more]
KAG7021684.17.87e-6899.03Transmembrane protein-like protein [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_038879685.15.33e-6697.09transmembrane protein 230 [Benincasa hispida][more]
XP_008453547.11.53e-6597.09PREDICTED: transmembrane protein 230-like [Cucumis melo][more]
XP_004146339.16.24e-6596.12transmembrane protein 230 [Cucumis sativus] >KGN65495.1 hypothetical protein Csa... [more]
Match NameE-valueIdentityDescription
A0A6J1I4W82.68e-68100.00Transmembrane protein 230 OS=Cucurbita maxima OX=3661 GN=LOC111470698 PE=3 SV=1[more]
A0A6J1EUE92.68e-68100.00Transmembrane protein 230 OS=Cucurbita moschata OX=3662 GN=LOC111437657 PE=3 SV=... [more]
A0A1S3BWL27.41e-6697.09Transmembrane protein 230 OS=Cucumis melo OX=3656 GN=LOC103494229 PE=3 SV=1[more]
A0A0A0LUC13.02e-6596.12Transmembrane protein 230 OS=Cucumis sativus OX=3659 GN=Csa_1G426960 PE=3 SV=1[more]
A0A6J1JDX95.02e-6494.17Transmembrane protein 230 OS=Cucurbita maxima OX=3661 GN=LOC111484930 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT4G29850.13.1e-4581.55Eukaryotic protein of unknown function (DUF872) [more]
AT2G19350.11.4e-4276.70Eukaryotic protein of unknown function (DUF872) [more]
AT3G29170.11.2e-1245.45Eukaryotic protein of unknown function (DUF872) [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008590Transmembrane protein 230/134PFAMPF05915DUF872coord: 29..101
e-value: 4.5E-17
score: 62.3
NoneNo IPR availablePANTHERPTHR15664:SF18TRANSMEMBRANE PROTEIN 230-LIKEcoord: 1..103
IPR044234Transmembrane protein 230PANTHERPTHR15664C20ORF30 PROTEINcoord: 1..103

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g13270.1Cp4.1LG04g13270.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005776 autophagosome
cellular_component GO:0005768 endosome
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0016021 integral component of membrane