Cp4.1LG04g13090 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG04g13090
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Xyloglucan endotransglucosylase/hydrolase
Location	Cp4.1LG04: 10675427 .. 10676269 (-)
RNA-Seq Expression	Cp4.1LG04g13090
Synteny	Cp4.1LG04g13090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCTCCATAACTCTTCTCCTTCTCCTTTTCTCCGCCTCTCTAATTGCTCTCTCTGCAGCTAACTTCAACCAGGATTTTCAAATCACTTGGGGAGATGGCCGAGCCAAAATTCTCAACAACGGCGAACTTCTCACTCTGTCTCTCGACATGGCCTCAGGCTCCGGCTTCCAATCCCAGAACGAGTACTTGTTTGGAAAGATTGATATGCAACTGGCATTTCCGCTGGCACTGTCACTGCCTATTATGCAAGTCTGCTTGTTTAATTGTTCGTGATTAAACATGGTGATTGTGTAAAGCTAAAAATATAATTTCATCCTCTGTAACATGGAAACATTGATATGATTGAACTTCAAACAGCAGAAGGGCTATAAATGATTGAACTTCAAACAGATGCCAAAACAAATGTGAATAATAATCGGAACAAAATATTTATATGTATTAACAACCAACTAAAAATCACATGGATTATTCATTAGTCACTGAATCATCTCTCATACAGTTATTCGAAACATATCAAAGCAAAAGAAAACTGTAGGGAATCCTTGATCCTAATCATTCAAACAACATTATGAAAGGGCAAATGAAATAAGAAATTTACCGTCACCGACCAACCCATTCATGTTTTTGGCCTACCAGAGGTAGATTGATGACAATAAAACATCTTAAATACAGACACTAGCAAACAGGAACAAGTCACTGTACAGGAATCTGTACAAAAGTAGCTTCCGCTGTTAATATGTTATACAGATACAAATGATATCCTTTCGAATTGATCCAACGAGTCTCAAAGAGCAGGAGTTGTCACCTGAAGAATTCTCTGAAGACCTACAGAATATGATG

mRNA sequence

ATGCCCTCCATAACTCTTCTCCTTCTCCTTTTCTCCGCCTCTCTAATTGCTCTCTCTGCAGCTAACTTCAACCAGGATTTTCAAATCACTTGGGGAGATGGCCGAGCCAAAATTCTCAACAACGGCGAACTTCTCACTCTGTCTCTCGACATGGCCTCAGGCTCCGGCTTCCAATCCCAGAACGAGTACTTGTTTGGAAAGATTGATATGCAACTGGCATTTCCGCTGGCACTGTCACTGCCTATTATGCAAATACAAATGATATCCTTTCGAATTGATCCAACGAGTCTCAAAGAGCAGGAGTTGTCACCTGAAGAATTCTCTGAAGACCTACAGAATATGATG

Coding sequence (CDS)

ATGCCCTCCATAACTCTTCTCCTTCTCCTTTTCTCCGCCTCTCTAATTGCTCTCTCTGCAGCTAACTTCAACCAGGATTTTCAAATCACTTGGGGAGATGGCCGAGCCAAAATTCTCAACAACGGCGAACTTCTCACTCTGTCTCTCGACATGGCCTCAGGCTCCGGCTTCCAATCCCAGAACGAGTACTTGTTTGGAAAGATTGATATGCAACTGGCATTTCCGCTGGCACTGTCACTGCCTATTATGCAAATACAAATGATATCCTTTCGAATTGATCCAACGAGTCTCAAAGAGCAGGAGTTGTCACCTGAAGAATTCTCTGAAGACCTACAGAATATGATG

Protein sequence

MPSITLLLLLFSASLIALSAANFNQDFQITWGDGRAKILNNGELLTLSLDMASGSGFQSQNEYLFGKIDMQLAFPLALSLPIMQIQMISFRIDPTSLKEQELSPEEFSEDLQNMM

Homology

[Close]

BLAST of Cp4.1LG04g13090 vs. ExPASy Swiss-Prot
Match: Q38910 (Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis thaliana OX=3702 GN=XTH23 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.6e-18
Identity = 44/68 (64.71%), Postives = 57/68 (83.82%), Query Frame = 0


Query: 5  TLLLLLFSASLIALSAANFNQDFQITWGDGRAKILNNGELLTLSLDMASGSGFQSQNEYL 64
          T+++ L ++ +I   +ANF +D +ITWGDGR +I NNG+LLTLSLD ASGSGFQS+NEYL
Sbjct: 8  TIVVALLASFMICSVSANFQRDVEITWGDGRGQITNNGDLLTLSLDKASGSGFQSKNEYL 67

Query: 65 FGKIDMQL 73
          FGKIDMQ+
Sbjct: 68 FGKIDMQI 75

[Close]

BLAST of Cp4.1LG04g13090 vs. ExPASy Swiss-Prot
Match: Q38857 (Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana OX=3702 GN=XTH22 PE=1 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 7.8e-18
Identity = 47/71 (66.20%), Postives = 58/71 (81.69%), Query Frame = 0


Query: 3  SITLLLLLFSASLIALS-AANFNQDFQITWGDGRAKILNNGELLTLSLDMASGSGFQSQN 62
          +IT LL LF + +I  S +ANF +D +ITWGDGR +I NNGELLTLSLD +SGSGFQS+N
Sbjct: 2  AITYLLPLFLSLIITSSVSANFQRDVEITWGDGRGQIKNNGELLTLSLDKSSGSGFQSKN 61

Query: 63 EYLFGKIDMQL 73
          EYLFGK+ MQ+
Sbjct: 62 EYLFGKVSMQM 72

[Close]

BLAST of Cp4.1LG04g13090 vs. ExPASy Swiss-Prot
Match: P24806 (Xyloglucan endotransglucosylase/hydrolase protein 24 OS=Arabidopsis thaliana OX=3702 GN=XTH24 PE=1 SV=2)

HSP 1 Score: 88.6 bits (218), Expect = 5.1e-17
Identity = 45/68 (66.18%), Postives = 54/68 (79.41%), Query Frame = 0


Query: 5  TLLLLLFSASLIALSAANFNQDFQITWGDGRAKILNNGELLTLSLDMASGSGFQSQNEYL 64
          TLL+  FS     +SAA+FN D  + WG+GR KILNNG+LLTLSLD +SGSGFQS+ EYL
Sbjct: 11 TLLVAAFS-----VSAADFNTDVNVAWGNGRGKILNNGQLLTLSLDKSSGSGFQSKTEYL 70

Query: 65 FGKIDMQL 73
          FGKIDMQ+
Sbjct: 71 FGKIDMQI 73

[Close]

BLAST of Cp4.1LG04g13090 vs. ExPASy Swiss-Prot
Match: Q38907 (Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana OX=3702 GN=XTH25 PE=2 SV=2)

HSP 1 Score: 87.4 bits (215), Expect = 1.1e-16
Identity = 46/76 (60.53%), Postives = 56/76 (73.68%), Query Frame = 0


Query: 3  SITLLLLLFSASLIALS------AANFNQDFQITWGDGRAKILNNGELLTLSLDMASGSG 62
          S  +L LLF+ ++   +      A  F+ +F ITWGDGR K+LNNGELLTLSLD ASGSG
Sbjct: 4  STFILSLLFTLTVSTTTLFSPVFAGTFDTEFDITWGDGRGKVLNNGELLTLSLDRASGSG 63

Query: 63 FQSQNEYLFGKIDMQL 73
          FQ++ EYLFGKIDMQL
Sbjct: 64 FQTKKEYLFGKIDMQL 79

[Close]

BLAST of Cp4.1LG04g13090 vs. ExPASy Swiss-Prot
Match: Q9ZSU4 (Xyloglucan endotransglucosylase/hydrolase protein 14 OS=Arabidopsis thaliana OX=3702 GN=XTH14 PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 5.6e-16
Identity = 42/71 (59.15%), Postives = 51/71 (71.83%), Query Frame = 0


Query: 2  PSITLLLLLFSASLIALSAANFNQDFQITWGDGRAKILNNGELLTLSLDMASGSGFQSQN 61
          P +  LLL     ++A SA NF + F ITWG+GRA I  NG+LLT +LD  SGSGFQS+ 
Sbjct: 9  PLLLSLLLAIGFFVVAASAGNFYESFDITWGNGRANIFENGQLLTCTLDKVSGSGFQSKK 68

Query: 62 EYLFGKIDMQL 73
          EYLFGKIDM+L
Sbjct: 69 EYLFGKIDMKL 79

[Close]

BLAST of Cp4.1LG04g13090 vs. NCBI nr
Match: KAG7021734.1 (putative xyloglucan endotransglucosylase/hydrolase protein 23, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 119 bits (299), Expect = 2.61e-32
Identity = 63/68 (92.65%), Postives = 64/68 (94.12%), Query Frame = 0


Query: 5  TLLLLLFSASLIALSAANFNQDFQITWGDGRAKILNNGELLTLSLDMASGSGFQSQNEYL 64
          TLLLLLFSASLIALSAANFNQD QITW DGRAKILNNG+LLTLSLD ASGSGFQSQNEYL
Sbjct: 26 TLLLLLFSASLIALSAANFNQDIQITWRDGRAKILNNGQLLTLSLDKASGSGFQSQNEYL 85

Query: 65 FGKIDMQL 72
           GKIDMQL
Sbjct: 86 LGKIDMQL 93

[Close]

BLAST of Cp4.1LG04g13090 vs. NCBI nr
Match: NP_001267702.1 (probable xyloglucan endotransglucosylase/hydrolase protein 23-like precursor [Cucumis sativus] >CAD87533.1 putative xyloglucan endotransglycosylase [Cucumis sativus] >CAD87535.1 putative xyloglucan endotransglycosylase [Cucumis sativus])

HSP 1 Score: 122 bits (307), Expect = 1.56e-31
Identity = 66/73 (90.41%), Postives = 68/73 (93.15%), Query Frame = 0


Query: 1  MPSITLLL-LLFSASLIALSAANFNQDFQITWGDGRAKILNNGELLTLSLDMASGSGFQS 60
          M S TL L LLFSASLIA+S+ANFNQDFQITWGDGRAKILNNGELLTLSLD ASGSGFQS
Sbjct: 1  MASTTLFLTLLFSASLIAISSANFNQDFQITWGDGRAKILNNGELLTLSLDKASGSGFQS 60

Query: 61 QNEYLFGKIDMQL 72
          QNEYLFGKIDMQL
Sbjct: 61 QNEYLFGKIDMQL 73

[Close]

BLAST of Cp4.1LG04g13090 vs. NCBI nr
Match: KAE8653160.1 (hypothetical protein Csa_019870 [Cucumis sativus])

HSP 1 Score: 122 bits (307), Expect = 3.31e-31
Identity = 66/73 (90.41%), Postives = 68/73 (93.15%), Query Frame = 0


Query: 1   MPSITLLL-LLFSASLIALSAANFNQDFQITWGDGRAKILNNGELLTLSLDMASGSGFQS 60
           M S TL L LLFSASLIA+S+ANFNQDFQITWGDGRAKILNNGELLTLSLD ASGSGFQS
Sbjct: 37  MASTTLFLTLLFSASLIAISSANFNQDFQITWGDGRAKILNNGELLTLSLDKASGSGFQS 96

Query: 61  QNEYLFGKIDMQL 72
           QNEYLFGKIDMQL
Sbjct: 97  QNEYLFGKIDMQL 109

[Close]

BLAST of Cp4.1LG04g13090 vs. NCBI nr
Match: XP_022987545.1 (probable xyloglucan endotransglucosylase/hydrolase protein 23 [Cucurbita maxima])

HSP 1 Score: 119 bits (298), Expect = 4.97e-30
Identity = 65/74 (87.84%), Postives = 67/74 (90.54%), Query Frame = 0


Query: 1  MPSITLLL--LLFSASLIALSAANFNQDFQITWGDGRAKILNNGELLTLSLDMASGSGFQ 60
          M S TLLL  L  SASLIALS+ANFNQDFQITWGDGRAKI+NNGELLTLSLD ASGSGFQ
Sbjct: 13 MASTTLLLITLFVSASLIALSSANFNQDFQITWGDGRAKIVNNGELLTLSLDKASGSGFQ 72

Query: 61 SQNEYLFGKIDMQL 72
          SQNEYLFGKIDMQL
Sbjct: 73 SQNEYLFGKIDMQL 86

[Close]

BLAST of Cp4.1LG04g13090 vs. NCBI nr
Match: XP_023515612.1 (probable xyloglucan endotransglucosylase/hydrolase protein 23 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 119 bits (297), Expect = 5.45e-30
Identity = 64/74 (86.49%), Postives = 67/74 (90.54%), Query Frame = 0


Query: 1  MPSITLLL--LLFSASLIALSAANFNQDFQITWGDGRAKILNNGELLTLSLDMASGSGFQ 60
          M S TLLL  L  SASL+ALS+ANFNQDFQITWGDGRAKI+NNGELLTLSLD ASGSGFQ
Sbjct: 1  MASTTLLLVTLFVSASLVALSSANFNQDFQITWGDGRAKIVNNGELLTLSLDKASGSGFQ 60

Query: 61 SQNEYLFGKIDMQL 72
          SQNEYLFGKIDMQL
Sbjct: 61 SQNEYLFGKIDMQL 74

[Close]

BLAST of Cp4.1LG04g13090 vs. ExPASy TrEMBL
Match: Q84JX3 (Xyloglucan endotransglucosylase/hydrolase OS=Cucumis sativus OX=3659 GN=XTH1 PE=2 SV=1)

HSP 1 Score: 122 bits (307), Expect = 7.53e-32
Identity = 66/73 (90.41%), Postives = 68/73 (93.15%), Query Frame = 0


Query: 1  MPSITLLL-LLFSASLIALSAANFNQDFQITWGDGRAKILNNGELLTLSLDMASGSGFQS 60
          M S TL L LLFSASLIA+S+ANFNQDFQITWGDGRAKILNNGELLTLSLD ASGSGFQS
Sbjct: 1  MASTTLFLTLLFSASLIAISSANFNQDFQITWGDGRAKILNNGELLTLSLDKASGSGFQS 60

Query: 61 QNEYLFGKIDMQL 72
          QNEYLFGKIDMQL
Sbjct: 61 QNEYLFGKIDMQL 73

[Close]

BLAST of Cp4.1LG04g13090 vs. ExPASy TrEMBL
Match: A0A6J1JH63 (Xyloglucan endotransglucosylase/hydrolase OS=Cucurbita maxima OX=3661 GN=LOC111485078 PE=3 SV=1)

HSP 1 Score: 119 bits (298), Expect = 2.40e-30
Identity = 65/74 (87.84%), Postives = 67/74 (90.54%), Query Frame = 0


Query: 1  MPSITLLL--LLFSASLIALSAANFNQDFQITWGDGRAKILNNGELLTLSLDMASGSGFQ 60
          M S TLLL  L  SASLIALS+ANFNQDFQITWGDGRAKI+NNGELLTLSLD ASGSGFQ
Sbjct: 13 MASTTLLLITLFVSASLIALSSANFNQDFQITWGDGRAKIVNNGELLTLSLDKASGSGFQ 72

Query: 61 SQNEYLFGKIDMQL 72
          SQNEYLFGKIDMQL
Sbjct: 73 SQNEYLFGKIDMQL 86

[Close]

BLAST of Cp4.1LG04g13090 vs. ExPASy TrEMBL
Match: A0A6J1E169 (Xyloglucan endotransglucosylase/hydrolase OS=Cucurbita moschata OX=3662 GN=LOC111429655 PE=3 SV=1)

HSP 1 Score: 119 bits (297), Expect = 2.64e-30
Identity = 64/74 (86.49%), Postives = 67/74 (90.54%), Query Frame = 0


Query: 1  MPSITLLL--LLFSASLIALSAANFNQDFQITWGDGRAKILNNGELLTLSLDMASGSGFQ 60
          M S TLLL  L  SASL+ALS+ANFNQDFQITWGDGRAKI+NNGELLTLSLD ASGSGFQ
Sbjct: 1  MASTTLLLVTLFVSASLVALSSANFNQDFQITWGDGRAKIVNNGELLTLSLDKASGSGFQ 60

Query: 61 SQNEYLFGKIDMQL 72
          SQNEYLFGKIDMQL
Sbjct: 61 SQNEYLFGKIDMQL 74

[Close]

BLAST of Cp4.1LG04g13090 vs. ExPASy TrEMBL
Match: A0A5D3CKM0 (Xyloglucan endotransglucosylase/hydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold152G00740 PE=3 SV=1)

HSP 1 Score: 118 bits (296), Expect = 2.75e-30
Identity = 61/71 (85.92%), Postives = 65/71 (91.55%), Query Frame = 0


Query: 2  PSITLLLLLFSASLIALSAANFNQDFQITWGDGRAKILNNGELLTLSLDMASGSGFQSQN 61
          P + L LL  +ASLIA+S+ANFNQDFQITWGDGRAKILNNGELLTLSLD ASGSGFQSQN
Sbjct: 4  PIMFLTLLFSAASLIAISSANFNQDFQITWGDGRAKILNNGELLTLSLDKASGSGFQSQN 63

Query: 62 EYLFGKIDMQL 72
          EYLFGKIDMQL
Sbjct: 64 EYLFGKIDMQL 74

[Close]

BLAST of Cp4.1LG04g13090 vs. ExPASy TrEMBL
Match: A0A5A7UVU6 (Xyloglucan endotransglucosylase/hydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G006300 PE=3 SV=1)

HSP 1 Score: 118 bits (296), Expect = 2.75e-30
Identity = 61/71 (85.92%), Postives = 65/71 (91.55%), Query Frame = 0


Query: 2  PSITLLLLLFSASLIALSAANFNQDFQITWGDGRAKILNNGELLTLSLDMASGSGFQSQN 61
          P + L LL  +ASLIA+S+ANFNQDFQITWGDGRAKILNNGELLTLSLD ASGSGFQSQN
Sbjct: 4  PIMFLTLLFSAASLIAISSANFNQDFQITWGDGRAKILNNGELLTLSLDKASGSGFQSQN 63

Query: 62 EYLFGKIDMQL 72
          EYLFGKIDMQL
Sbjct: 64 EYLFGKIDMQL 74

[Close]

BLAST of Cp4.1LG04g13090 vs. TAIR 10
Match: AT4G25810.1 (xyloglucan endotransglycosylase 6 )

HSP 1 Score: 93.6 bits (231), Expect = 1.1e-19
Identity = 44/68 (64.71%), Postives = 57/68 (83.82%), Query Frame = 0


Query: 5  TLLLLLFSASLIALSAANFNQDFQITWGDGRAKILNNGELLTLSLDMASGSGFQSQNEYL 64
          T+++ L ++ +I   +ANF +D +ITWGDGR +I NNG+LLTLSLD ASGSGFQS+NEYL
Sbjct: 8  TIVVALLASFMICSVSANFQRDVEITWGDGRGQITNNGDLLTLSLDKASGSGFQSKNEYL 67

Query: 65 FGKIDMQL 73
          FGKIDMQ+
Sbjct: 68 FGKIDMQI 75

[Close]

BLAST of Cp4.1LG04g13090 vs. TAIR 10
Match: AT5G57560.1 (Xyloglucan endotransglucosylase/hydrolase family protein )

HSP 1 Score: 91.3 bits (225), Expect = 5.5e-19
Identity = 47/71 (66.20%), Postives = 58/71 (81.69%), Query Frame = 0


Query: 3  SITLLLLLFSASLIALS-AANFNQDFQITWGDGRAKILNNGELLTLSLDMASGSGFQSQN 62
          +IT LL LF + +I  S +ANF +D +ITWGDGR +I NNGELLTLSLD +SGSGFQS+N
Sbjct: 2  AITYLLPLFLSLIITSSVSANFQRDVEITWGDGRGQIKNNGELLTLSLDKSSGSGFQSKN 61

Query: 63 EYLFGKIDMQL 73
          EYLFGK+ MQ+
Sbjct: 62 EYLFGKVSMQM 72

[Close]

BLAST of Cp4.1LG04g13090 vs. TAIR 10
Match: AT4G30270.1 (xyloglucan endotransglucosylase/hydrolase 24 )

HSP 1 Score: 88.6 bits (218), Expect = 3.6e-18
Identity = 45/68 (66.18%), Postives = 54/68 (79.41%), Query Frame = 0


Query: 5  TLLLLLFSASLIALSAANFNQDFQITWGDGRAKILNNGELLTLSLDMASGSGFQSQNEYL 64
          TLL+  FS     +SAA+FN D  + WG+GR KILNNG+LLTLSLD +SGSGFQS+ EYL
Sbjct: 11 TLLVAAFS-----VSAADFNTDVNVAWGNGRGKILNNGQLLTLSLDKSSGSGFQSKTEYL 70

Query: 65 FGKIDMQL 73
          FGKIDMQ+
Sbjct: 71 FGKIDMQI 73

[Close]

BLAST of Cp4.1LG04g13090 vs. TAIR 10
Match: AT5G57550.1 (xyloglucan endotransglucosylase/hydrolase 25 )

HSP 1 Score: 87.4 bits (215), Expect = 8.0e-18
Identity = 46/76 (60.53%), Postives = 56/76 (73.68%), Query Frame = 0


Query: 3  SITLLLLLFSASLIALS------AANFNQDFQITWGDGRAKILNNGELLTLSLDMASGSG 62
          S  +L LLF+ ++   +      A  F+ +F ITWGDGR K+LNNGELLTLSLD ASGSG
Sbjct: 4  STFILSLLFTLTVSTTTLFSPVFAGTFDTEFDITWGDGRGKVLNNGELLTLSLDRASGSG 63

Query: 63 FQSQNEYLFGKIDMQL 73
          FQ++ EYLFGKIDMQL
Sbjct: 64 FQTKKEYLFGKIDMQL 79

[Close]

BLAST of Cp4.1LG04g13090 vs. TAIR 10
Match: AT4G25820.1 (xyloglucan endotransglucosylase/hydrolase 14 )

HSP 1 Score: 85.1 bits (209), Expect = 4.0e-17
Identity = 42/71 (59.15%), Postives = 51/71 (71.83%), Query Frame = 0


Query: 2  PSITLLLLLFSASLIALSAANFNQDFQITWGDGRAKILNNGELLTLSLDMASGSGFQSQN 61
          P +  LLL     ++A SA NF + F ITWG+GRA I  NG+LLT +LD  SGSGFQS+ 
Sbjct: 9  PLLLSLLLAIGFFVVAASAGNFYESFDITWGNGRANIFENGQLLTCTLDKVSGSGFQSKK 68

Query: 62 EYLFGKIDMQL 73
          EYLFGKIDM+L
Sbjct: 69 EYLFGKIDMKL 79

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g13090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q38910	1.6e-18	64.71	Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis tha...	[more]
Q38857	7.8e-18	66.20	Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana OX=...	[more]
P24806	5.1e-17	66.18	Xyloglucan endotransglucosylase/hydrolase protein 24 OS=Arabidopsis thaliana OX=...	[more]
Q38907	1.1e-16	60.53	Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis tha...	[more]
Q9ZSU4	5.6e-16	59.15	Xyloglucan endotransglucosylase/hydrolase protein 14 OS=Arabidopsis thaliana OX=...	[more]

BLAST of Cp4.1LG04g13090 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7021734.1	2.61e-32	92.65	putative xyloglucan endotransglucosylase/hydrolase protein 23, partial [Cucurbit...	[more]
NP_001267702.1	1.56e-31	90.41	probable xyloglucan endotransglucosylase/hydrolase protein 23-like precursor [Cu...	[more]
KAE8653160.1	3.31e-31	90.41	hypothetical protein Csa_019870 [Cucumis sativus]	[more]
XP_022987545.1	4.97e-30	87.84	probable xyloglucan endotransglucosylase/hydrolase protein 23 [Cucurbita maxima]	[more]
XP_023515612.1	5.45e-30	86.49	probable xyloglucan endotransglucosylase/hydrolase protein 23 [Cucurbita pepo su...	[more]

BLAST of Cp4.1LG04g13090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
Q84JX3	7.53e-32	90.41	Xyloglucan endotransglucosylase/hydrolase OS=Cucumis sativus OX=3659 GN=XTH1 PE=...	[more]
A0A6J1JH63	2.40e-30	87.84	Xyloglucan endotransglucosylase/hydrolase OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1E169	2.64e-30	86.49	Xyloglucan endotransglucosylase/hydrolase OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A5D3CKM0	2.75e-30	85.92	Xyloglucan endotransglucosylase/hydrolase OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A5A7UVU6	2.75e-30	85.92	Xyloglucan endotransglucosylase/hydrolase OS=Cucumis melo var. makuwa OX=1194695...	[more]

BLAST of Cp4.1LG04g13090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25810.1	1.1e-19	64.71	xyloglucan endotransglycosylase 6	[more]
AT5G57560.1	5.5e-19	66.20	Xyloglucan endotransglucosylase/hydrolase family protein	[more]
AT4G30270.1	3.6e-18	66.18	xyloglucan endotransglucosylase/hydrolase 24	[more]
AT5G57550.1	8.0e-18	60.53	xyloglucan endotransglucosylase/hydrolase 25	[more]
AT4G25820.1	4.0e-17	59.15	xyloglucan endotransglucosylase/hydrolase 14	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.60.120.200		coord: 10..79 e-value: 8.6E-12 score: 46.9
None	No IPR available	PANTHER	PTHR31062:SF178	XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE	coord: 7..74
IPR000757	Glycoside hydrolase family 16	PFAM	PF00722	Glyco_hydro_16	coord: 24..73 e-value: 2.4E-6 score: 27.1
IPR044791	Beta-glucanase/XTH	PANTHER	PTHR31062	XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED	coord: 7..74
IPR013320	Concanavalin A-like lectin/glucanase domain superfamily	SUPERFAMILY	49899	Concanavalin A-like lectins/glucanases	coord: 22..75

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g13090.1	Cp4.1LG04g13090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042546	cell wall biogenesis
biological_process	GO:0071555	cell wall organization
biological_process	GO:0010411	xyloglucan metabolic process
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0048046	apoplast
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function	GO:0016762	xyloglucan:xyloglucosyl transferase activity