Cp4.1LG04g12930 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG04g12930
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	CpSecY
Location	Cp4.1LG04: 10593887 .. 10599688 (-)
RNA-Seq Expression	Cp4.1LG04g12930
Synteny	Cp4.1LG04g12930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAAGGTTACAAAATCCAAAAAGGGGAAGGAGAGAAATGGATAGGGCGATGAGGCAAACGCCTAATCCACCGAGCGTCGCTCAACATTAGCCTTTCACAAGCCGAAACTGTGGTGGGAGTAAATAATGTTGATATCAGTCAGAGAAGCTGCTGCAGCTTCTTCTTCGCCCCTTTGCTTCACCCTCTCCGCCCAATATCTTACCAATTCTAAGCGCTTTCCAAGGCCTAGACTTTCATTCACGCGAGCTTCCTTCTCTGTTCCTAACAAGCCCCGCGCTACCAAGTCCTGGAACCTTGGCCTCACTTCCAACAGGTGGGTCTCCTGCATTTATGTTCTTTTTCTGCTCATTGCACTTCAATTACTCGAATTAGTCTTGCAGTTTTGCCTCCTGAGATTTTCTCTCATATGGGTTTTCTTCTGGCTGTAGAATTTTGGGTGTTTTTCTGTACCTTTTGTTTTACCAGAGCATATGGCGTAGTGCAGTTACATATTTTTGTGCTCTCTAAATTTTCCATGCTTCACTGACATTAGAGAAGGAGTTTCCCCTGAAGAATTGGGCCGAACTGTTAGCCGATGCTTCTTGAGCAAGATTATGCTTTTGCGGTACTTAGGAATGTAGAAAAGTTAAATTAGATGAGAATGTCTTTGGAAGGCTGGGTTGAAGTTTGGTCTACATGTTACCAAGTGTTAAAAAAACGTATCTTGTTTAAAACCCAAAGCTGTACATAAATAGGCTCCCCAAGGGCTGCTTACATATCCTGGTTTTTCCCATTTGAGTCCTGTTATTTCAATTGGATTTCAATGTCCTTTAATGGTTGTTGGTCCATAATTGACATGATAATAGTTTCTTTTTTTCAGTGCTGAGAGCTCAGTTTTTGATCCCTTGGGAATCCGTCCAGATCTTTCTTCTGAATTAAGTTGTGGGTGGGAAAGTTTTCTTGGCTTTTGGGGGCAAACATTTGACAGTTCTTCAAGCACAAAACGAGATAAAGGTCCCTCAGCACGTGGATTGGCAGGTTTGTTTCTTGTCCTTCAATGTTGTAGTTTTGATGTATCTTTCGTACTGCGTTACTGAAACTAAGTTGACCTTGCAGCTGCAATCGAGGACAGTTCCATTGACATAGGGGACTTCTTCAAAGGTCCATTGCCAGGAAAATTTCTACAGCTCTTGGGCTATTTAGCACTATCAAGGCTTGGAATCTATATCCCTCTTGGAGGAGTGAACCGAGAGGCTTTTGTTGGGAACTTGGATCAGAACAGCTTATTGAGCACTTTAGATTCATTTTCTGGTGGAGGCATTGGCAGACTAGGGATATGCTCCCTTGGCATTGTTCCCTTCATCAATGCATCAATTGTCTTCCAGCTTCTTACACAAATTTATCCAAAATTGCAAGAGCTTCAGAAAAGAGAAGGTGAAGCTGGGCGAAAGAAAATTCTTCAATACACTCGATATGCCTCAGTTGGGTTTGCAATTGTACAAGTAAGGAGCTTGATTACTACTCAATATGGCCTATAATAAGTTTAGATTACTTCAGAAGGGAAAACTGTAGAAGCTGGGATTAACTCACTTAGTTTTACTGGATTACATACTAAATGGACATTCTGTAGGTAAGTACATAGAACTTGCACTTTCAAAAAGAACGGATACAAGTATTTTGAGCTTTTTATACTTGATTCTACCCCAAAGCCTGCTCAGAGACACCAAACGTTTCTGCTGGAAGGATTTAAAAAAATTTATATCCAAGTAGGCACCTATTCAAACTGTAGTAGATGCAAGCAAAAATCTGGAGCAATAGCCAAATGAATACGGAAGGATCTTAGGCAATGATCATATAGTTCCTAATAAAATTTGTGAGCTTTTATTTTAAGATTCTTTAATTAAGCTCCCATTTCCTACACAGGCAATTGGTCAAGTTCTGTACCTTCGCCCCTATGTTAATGATTTTAGTACAGAGTGGGTGCTTTCTTCTGTTACTTTATTAACACTTGGCTCAGTCATAACAACGTACATTGGGGAACGGATCACAGACCTAAAGCTAGGTAATGGGACATCTCTTTTAATATTCACCAGCATCATCTCCTATCTACCAGCATCCTTTGGAAGAACAGCTGCACAAGCTTTACAGGATGGTAACTATGTTGGATTGGTTGCTATTATAATCTCCTTCTTTCTATTGGTACTTGGAATCGTATATGTTCAGGTAAGTAATGGTTGATTTGATATATTTACCTTTTATTTCCTCATTACATAAGAAGTCTTATTATATGTGATTATAATTTATCTGAACCAATGTTTTCAGGAAGCAGAAAGGAAAATCCCGCTCAACTATGCTTCAAGATACACAAGCAGCGGTGGAGGGCTTCAGAAATCTGCTTACCTTCCCTTCAAGGTTTGTTTTCCTGCTTTGTTCTTATGCTATCAAAAAATTATATTAGCCAGTAATTAACTTTTAACCTTAAAGAAGCTTAAACTTTAAAGTCCTGCAGACTTTGATGCAGTAACTATAGCTAATTGCCAACTTGGAGGTCTTTGAGATCCCGCATTGGTTGGGAAGGAGAATGAAACATTCTCTATAAGGGTGTGGAAACCTCTCCCTAGCAGAAGTATTTTAAAAAACCTTGAGGGGAAGTCTGAAAAGGAAAGCCCAAAGAAGACAATATCTGCTAGCGGTGGGCTTGGGCTGTTACAATGGTATTTGAGCTAGACATCGGACGATGTGCCAGTGAGGAGGTTGATCTCCGAAGGGGAGTGGACACAAGACAGTGTGCCAGCAAGGATGCTAGGCCCCGAAGGGGGGTGGATTGAGGGGTCCCTCATCAATTGGAGAAGGGAACGAGAGTGTCAGCAAGGATGCTGGCCCCAAAGGGGGGAGGAGTGGATTGTGAGATCCCACATCAGTTGGGGAGGAGGGTGTGGAAACTTCTCCTTAGCAAATGCGTTTTAAAAATCTTGAGAGGAAGTCCAAAAAGAAAAGCTGAAAGAGGACAATAACATACCTTATCTGATAGCGGGTCTGTTACAATTTCAAATCTTTATCCATGCTCTCTCATTTCTAAATTCATAAATTTGTAATCTGGGGTAACCAACAAGAATTTTGTACAAGTTTCATATTTATTTTACTAAGTTCATTATGCACAGGTAAATAGTTCTGGTGTAATGCCGATCATTTTTTCAACATCTACATTGTCCCTGCCGGGTACTCTAGCTCGCTTCACAGGTTTATCTGTCCTAAAGAACGCTGCATTTGCTTTAAATCCAGGAGGTAAGATGTTTTGGTTTACTGCCAATTGAAAATAACTTGAGGACTTAGTACTTTGAGATTGATGAAACTCTTTATCTTGCAGCCATTACAATATGCTACATTCGCGTTTAGTTTGTAATAAAGTTTCAATTCTTTTAAGAAATGGTTCAGTCACTTTTCTGTTCAATCCCATTAAATTGTGCAGGGTTTCTCATAATTGGTAGACAGGACTTCCTGGTACTCCTAAACTAACACATGGGATTTTCTCAGGCTCATTCTATCTTCCAACCAACATCCTTTTGATAGCCTTCTTCAACTATTACTACACATTCCTACAGTTGGATCCCGATGATGTGAGCGAACAATTGAAGCGGCAGGGTGCTTCAATTCCCCTTGTCCGTCCGGGCAAAAGTACAGCTTCGTTTCTGAAAGCGGTAATCTTGCCTCACTTAACATGATGTACTTGTTTCGAAGTTCTTGCTGTTGAATCAGTAATCTTGCTCAATGAAGTTCCTCTTAACTGAATATGTTGTGCACCTAAAATGATTATTGATTGATTATGGCTTCTTGTTTACTAATTTATAGGTTCTAAGTCGGATTTCAGTTCTTGGTTCTGCTTTCTTGGCAATCCTTGCTGCTGGTCCTGCGGTGATTGAGCAAACAACACACTTAACAGCATTTCGAGGATTTGCAGGAACCTCTGTTCTCATTCTTGTCGGCTGTGCTACAGACACTGCCAGAAAAGTACAAGCTGAGATAATCTCTCAGAAGTACAAGAACATAGAGTTCTATGACATCGATAGGTATACTCCATGAAAGAGAGAATGTAATGGAACCAACATTGATGCCAAACCTTAAGAATTGTATTCCATTGCATCATACTCAATGGAACACTGCTTCTCTTTGCTTTCATCAATCGCTCCAATCAGAATGCAAAAAACGATTGGATTTGACATAAAATAAAACCTTTTAAACATCCATTACTGTTCGTCCACTGATAAACTGGAAAATTGAGATAAATTTGCAAGGCCTGATCAAAGTCAACATGAACCTCTGAACAGGGTTACTTTTACAACCCCTTGAATCTAAGGCAGTCTTGACATATGTTCATATTCAGCGACACAATTCATTGGAAATCAAAATTAGGGATAACGGAGAAGTCAGAAAATTCTAAGGACAAGTATGTGTTATGTAATATATGTCGCTGATCATAAAATATCTAGTCCAGCGGTAAGCCTCATCCCTACATAGTGTCACAGTCATGCTCATCCAAAGCGTGTTGTGCATGACCACAAGTTGGATTGTGACACAAAGCGCTGTCTGCACCGTCTGAACACAAGTGTGGCTAAGGTTCTGTCTACAGTCTGGTGAAGTATAGCTTGCAGCTTGCAGCAGCTCGTTTAACCATCCTACGAACTCAGTTACTGTCTATAAGAGTTAAAACATATTGTAATGAGACCAACTTACTGGTTATGACATTAATACACAGTTTGTGATGTTGCGTTCCTGGTAATTGATAAAACTATACAGAAATAGACAGGTCCCTGTAAGGTCTGAAATGCCAGATGACAGAAAAGGGATGCACATCTGAAATGGACTTCATCCTTCTAATAGAGAAATATAGCCTTTGACACTACTGGAAACTGTTATCTATCTGGCTCAATGGAAAAGTCGGGTTCATCAGGCTTCTGCAGCTTTGGCATGTCATCTTTCATTTTCTGAGCGCCTCTCCTTGCGTTTGCAGCAAACCTTGAAGCCAGTAAGGTAACATCCAGATTCATTTTTGTCTGAGAAGGATTTGAAACAACACAAAATTGTTCCTCTCCTCCTTGGCCAGTTTCACTAGCCACTTCTTCAGATAATATAAACGACTCCCTCATTAAGAGATCTTTTGCCATCATCCTTTTCTTATGGCGACGCCAAGCAGCTTGAATAAAGCAAGCTGCCCATGTTCTCCAATGATGAGAGTAAAAGCGGAATGTGTGCTGCAACTTTTTACTGTGCAGACGTCTAAATTGGTTGGCTACAAATTTAAGATCTTCAGCACGGAGTGCAAAAGCTTCAACTTCATTGAGCGCTCTGACTGTTCTAGTTGAGGAGGGCAAGTTGGTGGTGGATTTTGGGTGCAACGCCCAAGAAAGTAGTTCCTCCCCACAAAAGTCTCCAGGACGCAACGTTATGGAGTTGAAGAAACCAGAGCGACCTCCATTCGTAGTAGAACTCTCCAATCTGCCTCGGATAACGAACAGCATCTCGGTTACTGGGTCACCCTCTCGTACAATATAGGTACCCTCAGTGCTCAAGGACGATATCAGGCGTTCACATATTGCATCTAGTAGCTGATCATCCATCTGTGAGAAGAAAGGGACCTGCAAAACAGGGAAAAAAGAGTGCTTCAATCTGCTTAGTGAGTCATGGGTGACAACTCAATTCATGAACTTTTACCACATAACCACATCTACACAAGTAATCAATCGGGAAGAATTGTTTATTCATTTGTGAAGTTTTAAGGAATCCTAGATGATAATTGCAGAACCATAAGCCTTCACATTGTGTGG

mRNA sequence

AGAAAGGTTACAAAATCCAAAAAGGGGAAGGAGAGAAATGGATAGGGCGATGAGGCAAACGCCTAATCCACCGAGCGTCGCTCAACATTAGCCTTTCACAAGCCGAAACTGTGGTGGGAGTAAATAATGTTGATATCAGTCAGAGAAGCTGCTGCAGCTTCTTCTTCGCCCCTTTGCTTCACCCTCTCCGCCCAATATCTTACCAATTCTAAGCGCTTTCCAAGGCCTAGACTTTCATTCACGCGAGCTTCCTTCTCTGTTCCTAACAAGCCCCGCGCTACCAAGTCCTGGAACCTTGGCCTCACTTCCAACAGAGAAGGAGTTTCCCCTGAAGAATTGGGCCGAACTGTTAGCCGATGCTTCTTGAGCAAGATTATGCTTTTGCGTGCTGAGAGCTCAGTTTTTGATCCCTTGGGAATCCGTCCAGATCTTTCTTCTGAATTAAGTTGTGGGTGGGAAAGTTTTCTTGGCTTTTGGGGGCAAACATTTGACAGTTCTTCAAGCACAAAACGAGATAAAGGTCCCTCAGCACGTGGATTGGCAGCTGCAATCGAGGACAGTTCCATTGACATAGGGGACTTCTTCAAAGGTCCATTGCCAGGAAAATTTCTACAGCTCTTGGGCTATTTAGCACTATCAAGGCTTGGAATCTATATCCCTCTTGGAGGAGTGAACCGAGAGGCTTTTGTTGGGAACTTGGATCAGAACAGCTTATTGAGCACTTTAGATTCATTTTCTGGTGGAGGCATTGGCAGACTAGGGATATGCTCCCTTGGCATTGTTCCCTTCATCAATGCATCAATTGTCTTCCAGCTTCTTACACAAATTTATCCAAAATTGCAAGAGCTTCAGAAAAGAGAAGGTGAAGCTGGGCGAAAGAAAATTCTTCAATACACTCGATATGCCTCAGTTGGGTTTGCAATTGTACAAGCAATTGGTCAAGTTCTGTACCTTCGCCCCTATGTTAATGATTTTAGTACAGAGTGGGTGCTTTCTTCTGTTACTTTATTAACACTTGGCTCAGTCATAACAACGTACATTGGGGAACGGATCACAGACCTAAAGCTAGGTAATGGGACATCTCTTTTAATATTCACCAGCATCATCTCCTATCTACCAGCATCCTTTGGAAGAACAGCTGCACAAGCTTTACAGGATGGTAACTATGTTGGATTGGTTGCTATTATAATCTCCTTCTTTCTATTGGTACTTGGAATCGTATATGTTCAGGAAGCAGAAAGGAAAATCCCGCTCAACTATGCTTCAAGATACACAAGCAGCGGTGGAGGGCTTCAGAAATCTGCTTACCTTCCCTTCAAGGTAAATAGTTCTGGTGTAATGCCGATCATTTTTTCAACATCTACATTGTCCCTGCCGGGTACTCTAGCTCGCTTCACAGGTTTATCTGTCCTAAAGAACGCTGCATTTGCTTTAAATCCAGGAGGCTCATTCTATCTTCCAACCAACATCCTTTTGATAGCCTTCTTCAACTATTACTACACATTCCTACAGTTGGATCCCGATGATGTGAGCGAACAATTGAAGCGGCAGGGTGCTTCAATTCCCCTTGTCCGTCCGGGCAAAAGTACAGCTTCGTTTCTGAAAGCGGTTCTAAGTCGGATTTCAGTTCTTGGTTCTGCTTTCTTGGCAATCCTTGCTGCTGGTCCTGCGGTGATTGAGCAAACAACACACTTAACAGCATTTCGAGGATTTGCAGGAACCTCTGTTCTCATTCTTGTCGGCTGTGCTACAGACACTGCCAGAAAAGTACAAGCTGAGATAATCTCTCAGAAGTACAAGAACATAGAGTTCTATGACATCGATAGGTATACTCCATGAAAGAGAGAATGTAATGGAACCAACATTGATGCCAAACCTTAAGAATTGTATTCCATTGCATCATACTCAATGGAACACTGCTTCTCTTTGCTTTCATCAATCGCTCCAATCAGAATGCAAAAAACGATTGGATTTGACATAAAATAAAACCTTTTAAACATCCATTACTGTTCGTCCACTGATAAACTGGAAAATTGAGATAAATTTGCAAGGCCTGATCAAAGTCAACATGAACCTCTGAACAGGGTTACTTTTACAACCCCTTGAATCTAAGGCAGTCTTGACATATGTTCATATTCAGCGACACAATTCATTGGAAATCAAAATTAGGGATAACGGAGAAGTCAGAAAATTCTAAGGACAAGTATGTGTTATGTAATATATGTCGCTGATCATAAAATATCTAGTCCAGCGGTAAGCCTCATCCCTACATAGTGTCACAGTCATGCTCATCCAAAGCGTGTTGTGCATGACCACAAGTTGGATTGTGACACAAAGCGCTGTCTGCACCGTCTGAACACAAGTGTGGCTAAGGTTCTGTCTACAGTCTGGTGAAGTATAGCTTGCAGCTTGCAGCAGCTCGTTTAACCATCCTACGAACTCAGTTACTGTCTATAAGAGTTAAAACATATTGTAATGAGACCAACTTACTGGTTATGACATTAATACACAGTTTGTGATGTTGCGTTCCTGGTAATTGATAAAACTATACAGAAATAGACAGGTCCCTGTAAGGTCTGAAATGCCAGATGACAGAAAAGGGATGCACATCTGAAATGGACTTCATCCTTCTAATAGAGAAATATAGCCTTTGACACTACTGGAAACTGTTATCTATCTGGCTCAATGGAAAAGTCGGGTTCATCAGGCTTCTGCAGCTTTGGCATGTCATCTTTCATTTTCTGAGCGCCTCTCCTTGCGTTTGCAGCAAACCTTGAAGCCAGTAAGGTAACATCCAGATTCATTTTTGTCTGAGAAGGATTTGAAACAACACAAAATTGTTCCTCTCCTCCTTGGCCAGTTTCACTAGCCACTTCTTCAGATAATATAAACGACTCCCTCATTAAGAGATCTTTTGCCATCATCCTTTTCTTATGGCGACGCCAAGCAGCTTGAATAAAGCAAGCTGCCCATGTTCTCCAATGATGAGAGTAAAAGCGGAATGTGTGCTGCAACTTTTTACTGTGCAGACGTCTAAATTGGTTGGCTACAAATTTAAGATCTTCAGCACGGAGTGCAAAAGCTTCAACTTCATTGAGCGCTCTGACTGTTCTAGTTGAGGAGGGCAAGTTGGTGGTGGATTTTGGGTGCAACGCCCAAGAAAGTAGTTCCTCCCCACAAAAGTCTCCAGGACGCAACGTTATGGAGTTGAAGAAACCAGAGCGACCTCCATTCGTAGTAGAACTCTCCAATCTGCCTCGGATAACGAACAGCATCTCGGTTACTGGGTCACCCTCTCGTACAATATAGGTACCCTCAGTGCTCAAGGACGATATCAGGCGTTCACATATTGCATCTAGTAGCTGATCATCCATCTGTGAGAAGAAAGGGACCTGCAAAACAGGGAAAAAAGAGTGCTTCAATCTGCTTAGTGAGTCATGGGTGACAACTCAATTCATGAACTTTTACCACATAACCACATCTACACAAGTAATCAATCGGGAAGAATTGTTTATTCATTTGTGAAGTTTTAAGGAATCCTAGATGATAATTGCAGAACCATAAGCCTTCACATTGTGTGG

Coding sequence (CDS)

ATGTTGATATCAGTCAGAGAAGCTGCTGCAGCTTCTTCTTCGCCCCTTTGCTTCACCCTCTCCGCCCAATATCTTACCAATTCTAAGCGCTTTCCAAGGCCTAGACTTTCATTCACGCGAGCTTCCTTCTCTGTTCCTAACAAGCCCCGCGCTACCAAGTCCTGGAACCTTGGCCTCACTTCCAACAGAGAAGGAGTTTCCCCTGAAGAATTGGGCCGAACTGTTAGCCGATGCTTCTTGAGCAAGATTATGCTTTTGCGTGCTGAGAGCTCAGTTTTTGATCCCTTGGGAATCCGTCCAGATCTTTCTTCTGAATTAAGTTGTGGGTGGGAAAGTTTTCTTGGCTTTTGGGGGCAAACATTTGACAGTTCTTCAAGCACAAAACGAGATAAAGGTCCCTCAGCACGTGGATTGGCAGCTGCAATCGAGGACAGTTCCATTGACATAGGGGACTTCTTCAAAGGTCCATTGCCAGGAAAATTTCTACAGCTCTTGGGCTATTTAGCACTATCAAGGCTTGGAATCTATATCCCTCTTGGAGGAGTGAACCGAGAGGCTTTTGTTGGGAACTTGGATCAGAACAGCTTATTGAGCACTTTAGATTCATTTTCTGGTGGAGGCATTGGCAGACTAGGGATATGCTCCCTTGGCATTGTTCCCTTCATCAATGCATCAATTGTCTTCCAGCTTCTTACACAAATTTATCCAAAATTGCAAGAGCTTCAGAAAAGAGAAGGTGAAGCTGGGCGAAAGAAAATTCTTCAATACACTCGATATGCCTCAGTTGGGTTTGCAATTGTACAAGCAATTGGTCAAGTTCTGTACCTTCGCCCCTATGTTAATGATTTTAGTACAGAGTGGGTGCTTTCTTCTGTTACTTTATTAACACTTGGCTCAGTCATAACAACGTACATTGGGGAACGGATCACAGACCTAAAGCTAGGTAATGGGACATCTCTTTTAATATTCACCAGCATCATCTCCTATCTACCAGCATCCTTTGGAAGAACAGCTGCACAAGCTTTACAGGATGGTAACTATGTTGGATTGGTTGCTATTATAATCTCCTTCTTTCTATTGGTACTTGGAATCGTATATGTTCAGGAAGCAGAAAGGAAAATCCCGCTCAACTATGCTTCAAGATACACAAGCAGCGGTGGAGGGCTTCAGAAATCTGCTTACCTTCCCTTCAAGGTAAATAGTTCTGGTGTAATGCCGATCATTTTTTCAACATCTACATTGTCCCTGCCGGGTACTCTAGCTCGCTTCACAGGTTTATCTGTCCTAAAGAACGCTGCATTTGCTTTAAATCCAGGAGGCTCATTCTATCTTCCAACCAACATCCTTTTGATAGCCTTCTTCAACTATTACTACACATTCCTACAGTTGGATCCCGATGATGTGAGCGAACAATTGAAGCGGCAGGGTGCTTCAATTCCCCTTGTCCGTCCGGGCAAAAGTACAGCTTCGTTTCTGAAAGCGGTTCTAAGTCGGATTTCAGTTCTTGGTTCTGCTTTCTTGGCAATCCTTGCTGCTGGTCCTGCGGTGATTGAGCAAACAACACACTTAACAGCATTTCGAGGATTTGCAGGAACCTCTGTTCTCATTCTTGTCGGCTGTGCTACAGACACTGCCAGAAAAGTACAAGCTGAGATAATCTCTCAGAAGTACAAGAACATAGAGTTCTATGACATCGATAGGTATACTCCATGA

Protein sequence

MLISVREAAAASSSPLCFTLSAQYLTNSKRFPRPRLSFTRASFSVPNKPRATKSWNLGLTSNREGVSPEELGRTVSRCFLSKIMLLRAESSVFDPLGIRPDLSSELSCGWESFLGFWGQTFDSSSSTKRDKGPSARGLAAAIEDSSIDIGDFFKGPLPGKFLQLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINASIVFQLLTQIYPKLQELQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTEWVLSSVTLLTLGSVITTYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTAAQALQDGNYVGLVAIIISFFLLVLGIVYVQEAERKIPLNYASRYTSSGGGLQKSAYLPFKVNSSGVMPIIFSTSTLSLPGTLARFTGLSVLKNAAFALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTASFLKAVLSRISVLGSAFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDIDRYTP

Homology

[Close]

BLAST of Cp4.1LG04g12930 vs. ExPASy Swiss-Prot
Match: Q38885 (Preprotein translocase subunit SCY1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SCY1 PE=1 SV=2)

HSP 1 Score: 823.2 bits (2125), Expect = 1.9e-237
Identity = 438/573 (76.44%), Postives = 478/573 (83.42%), Query Frame = 0


Query: 2   LISVREAAAASSSPLCFTLSAQYLTNSKRFPRPRLSFTRASFSVPNKPR----ATKSWNL 61
           +I+V E ++ SSS   F   ++    S    R    +  + FSV  K R      KSWNL
Sbjct: 1   MITVSEVSSYSSSSSNFASLSRLNHKSSSRLRSSSLYKGSFFSVSTKTRRNTCKAKSWNL 60

Query: 62  GLTSNREGVSPEELGRTVSRCFLSKIMLLRAESSVFDPLGIRPDLSSELSCGWESFLGFW 121
           GL  N                         +E+SVFDPLGI PD +S LS  WESF+   
Sbjct: 61  GLVINSRS----------------------SEASVFDPLGINPDETSGLSSIWESFVSLL 120

Query: 122 GQTFDSSSSTKRDKGPSARGLAAAIEDSSIDIGDFFKGPLPGKFLQLLGYLALSRLGIYI 181
             +F+SSS  +RDK  S RG+AAAIEDSSID GDFFKGPLPGKFL+LLG+LALSRLGIYI
Sbjct: 121 SPSFESSSGNRRDKPSSGRGVAAAIEDSSIDFGDFFKGPLPGKFLKLLGFLALSRLGIYI 180

Query: 182 PLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINASIVFQLLTQIYPK 241
           PLGGVNREAFVGNLDQNS+LSTLD+FSGGGIGRLGICSLGIVPFINA IVFQLL Q+YPK
Sbjct: 181 PLGGVNREAFVGNLDQNSILSTLDTFSGGGIGRLGICSLGIVPFINAQIVFQLLAQVYPK 240

Query: 242 LQELQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTEWVLSSVTLLTL 301
           LQ+LQK+EGEAGRKKILQYTRYASVGFAIVQAIGQV YLRPYVNDFSTEWV+SSVTLLTL
Sbjct: 241 LQDLQKKEGEAGRKKILQYTRYASVGFAIVQAIGQVFYLRPYVNDFSTEWVVSSVTLLTL 300

Query: 302 GSVITTYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTAAQALQDGNYVGLVAIIISF 361
           GSV+TTYIGERI+DLKLGNGTSLLIFTSIISYLPASFGRT A+ALQ+GNY GL  I++SF
Sbjct: 301 GSVLTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTTAEALQEGNYTGLGTIVVSF 360

Query: 362 FLLVLGIVYVQEAERKIPLNYASRYTSSGGGLQKSAYLPFKVNSSGVMPIIFSTSTLSLP 421
            LLVLGIVYVQEAERKIPLNYASRYTS  GGLQKSAYLPFKVNS+GVMPIIFSTS+L+LP
Sbjct: 361 LLLVLGIVYVQEAERKIPLNYASRYTSKAGGLQKSAYLPFKVNSAGVMPIIFSTSSLALP 420

Query: 422 GTLARFTGLSVLKNAAFALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGA 481
            TLARFTG+S LKN AFAL PGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGA
Sbjct: 421 ATLARFTGISALKNVAFALTPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGA 480

Query: 482 SIPLVRPGKSTASFLKAVLSRISVLGSAFLAILAAGPAVIEQTTHLTAFRGFAGTSVLIL 541
           SIPLVRPGKSTA F+K VL RISVLGSAFLA+LAAGPAV+EQ THLTAFRGFAGTSVLIL
Sbjct: 481 SIPLVRPGKSTALFIKTVLGRISVLGSAFLAVLAAGPAVVEQITHLTAFRGFAGTSVLIL 540

Query: 542 VGCATDTARKVQAEIISQKYKNIEFYDIDRYTP 571
           VGCATDTARKVQAEIISQKYKNIEFY++D+Y P
Sbjct: 541 VGCATDTARKVQAEIISQKYKNIEFYELDKYDP 551

[Close]

BLAST of Cp4.1LG04g12930 vs. ExPASy Swiss-Prot
Match: P93690 (Preprotein translocase subunit SECY, chloroplastic OS=Spinacia oleracea OX=3562 GN=SECY PE=2 SV=1)

HSP 1 Score: 786.2 bits (2029), Expect = 2.5e-226
Identity = 421/569 (73.99%), Postives = 471/569 (82.78%), Query Frame = 0


Query: 1   MLISVREAA--AASSSPLCFTLSAQYLTNSKRFPRPRLSFTRASFSVPNKPRATKSWNLG 60
           ML++  EAA  A++SS + F+LS+      K   + R+   +A+F +  KP         
Sbjct: 1   MLVTFTEAAATASTSSLISFSLSSP----PKFHHKSRIYGCKATFGLRTKP--------- 60

Query: 61  LTSNREGVSPEELGRTVSRCFLSKIMLLRAESSVFDPLGIRPDLSSELSCGWESFLGFWG 120
            TS     S      T S C           SSVFDPLGI  D S  ++  W+  L F  
Sbjct: 61  -TSWIAAASLSSSTTTTSSC----------GSSVFDPLGIEQDNSWGVASAWDGVLKFVS 120

Query: 121 QTFDSSSSTKRDKGPSARGLAAAIEDSSIDIGDFFKGPLPGKFLQLLGYLALSRLGIYIP 180
           QTF+SSS T++D+  SARG+AAAIEDSSID GDFFKGPLPGKFL LLG LALSRLGIY+P
Sbjct: 121 QTFESSSGTRKDRSSSARGVAAAIEDSSIDFGDFFKGPLPGKFLTLLGLLALSRLGIYVP 180

Query: 181 LGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINASIVFQLLTQIYPKL 240
           LGGVNREAFVGNLDQNS +STLDSFSGGGIGRLGICSLGIVPFINA IVFQLL+Q+YPKL
Sbjct: 181 LGGVNREAFVGNLDQNSFISTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLSQVYPKL 240

Query: 241 QELQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTEWVLSSVTLLTLG 300
           Q+LQK+EGEAGRKKI QYT+YASVGFA+VQAIGQVL+LRPYVND+STEWVLSSV LLTLG
Sbjct: 241 QDLQKKEGEAGRKKIKQYTQYASVGFALVQAIGQVLFLRPYVNDYSTEWVLSSVILLTLG 300

Query: 301 SVITTYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTAAQALQDGNYVGLVAIIISFF 360
           SV TTY+GERI+DLKLGNGTSLLIFT+IISYLPASFGRT A+A Q+GNY GL  I++SF 
Sbjct: 301 SVFTTYLGERISDLKLGNGTSLLIFTNIISYLPASFGRTVAEAYQEGNYTGLAIIVVSFV 360

Query: 361 LLVLGIVYVQEAERKIPLNYASRYTSSGGGLQKSAYLPFKVNSSGVMPIIFSTSTLSLPG 420
            LV GIVYVQEAERKIP+NYASRY+   GGLQKSAYLPFKVNS+GVMPIIFSTS+LSLP 
Sbjct: 361 SLVFGIVYVQEAERKIPMNYASRYSGKSGGLQKSAYLPFKVNSAGVMPIIFSTSSLSLPA 420

Query: 421 TLARFTGLSVLKNAAFALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGAS 480
           TLARFTGL +LK AA AL PGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGAS
Sbjct: 421 TLARFTGLDILKKAAVALTPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGAS 480

Query: 481 IPLVRPGKSTASFLKAVLSRISVLGSAFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILV 540
           IPLVRPGKSTA+++K VLSRISVLGS FLAILAAGPAV+EQ THLTAFRGFAGTSVLILV
Sbjct: 481 IPLVRPGKSTAAYIKTVLSRISVLGSGFLAILAAGPAVVEQATHLTAFRGFAGTSVLILV 540

Query: 541 GCATDTARKVQAEIISQKYKNIEFYDIDR 568
           GCATDTARKVQAE+ISQKYKNIEFYD+++
Sbjct: 541 GCATDTARKVQAELISQKYKNIEFYDLEK 545

[Close]

BLAST of Cp4.1LG04g12930 vs. ExPASy Swiss-Prot
Match: Q6ZG25 (Preprotein translocase subunit SECY, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=SECY PE=2 SV=1)

HSP 1 Score: 768.8 bits (1984), Expect = 4.2e-221
Identity = 400/482 (82.99%), Postives = 434/482 (90.04%), Query Frame = 0


Query: 93  FDPLGI------RPDLSSELSCGWESFLGFWGQTFDSSSSTKRDKGPSARGLAAAIEDSS 152
           FDPLG+      R D  S LS    +F G     F SSS  +++K    RG AAAIEDSS
Sbjct: 78  FDPLGLYNDGPSRNDTQSPLS----NFFGVLSPVFGSSSGGRKEKS-YGRGAAAAIEDSS 137

Query: 153 IDIGDFFKGPLPGKFLQLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGG 212
           IDIGDFFKGPLPGKFL+LLGYLALSRLGIYIPLGGVNR+AF GNLDQNSLL TLDSFSGG
Sbjct: 138 IDIGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNRDAFAGNLDQNSLLGTLDSFSGG 197

Query: 213 GIGRLGICSLGIVPFINASIVFQLLTQIYPKLQELQKREGEAGRKKILQYTRYASVGFAI 272
           GIGRLGICSLGIVPFINA IVFQLL Q+YPKLQ+LQK+EGEAGRKK+LQYTRYASVGFAI
Sbjct: 198 GIGRLGICSLGIVPFINAQIVFQLLAQLYPKLQDLQKKEGEAGRKKVLQYTRYASVGFAI 257

Query: 273 VQAIGQVLYLRPYVNDFSTEWVLSSVTLLTLGSVITTYIGERITDLKLGNGTSLLIFTSI 332
           VQAIGQVL+LRPYVNDFSTEWVL+SVTLLTLGSV TT+IGERI+DLKLGNGTSLLIFTSI
Sbjct: 258 VQAIGQVLFLRPYVNDFSTEWVLTSVTLLTLGSVFTTFIGERISDLKLGNGTSLLIFTSI 317

Query: 333 ISYLPASFGRTAAQALQDGNYVGLVAIIISFFLLVLGIVYVQEAERKIPLNYASRYTSSG 392
           ISYLPASFGRT AQA QDGNYVGL+ II+SF  LVLGIVYVQEAERKIPLNYASRY+S  
Sbjct: 318 ISYLPASFGRTVAQAFQDGNYVGLLTIILSFLFLVLGIVYVQEAERKIPLNYASRYSSRS 377

Query: 393 GGLQKSAYLPFKVNSSGVMPIIFSTSTLSLPGTLARFTGLSVLKNAAFALNPGGSFYLPT 452
           GGLQ+SAYLPFKVNSSGVMPIIFSTS+L+LPGTLARFTGL  LK AA +LNPGG+ Y+PT
Sbjct: 378 GGLQRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLEFLKKAAISLNPGGALYIPT 437

Query: 453 NILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTASFLKAVLSRISVLGSAF 512
           N+LLIAFFNYYYTFLQLDPDD+SEQLKRQGASIPLVRPGKSTA+F+K VLS ISVLGSAF
Sbjct: 438 NVLLIAFFNYYYTFLQLDPDDLSEQLKRQGASIPLVRPGKSTAAFIKTVLSNISVLGSAF 497

Query: 513 LAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDID 569
           LA+LAAGP+V+EQ THLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYD++
Sbjct: 498 LAVLAAGPSVVEQITHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDVN 554

[Close]

BLAST of Cp4.1LG04g12930 vs. ExPASy Swiss-Prot
Match: O63066 (Preprotein translocase subunit SECY, chloroplastic OS=Zea mays OX=4577 GN=SECY PE=2 SV=1)

HSP 1 Score: 766.1 bits (1977), Expect = 2.7e-220
Identity = 398/479 (83.09%), Postives = 436/479 (91.02%), Query Frame = 0


Query: 93  FDPLGIRPDLSSELS-CGWESFLGFWGQTFDSSS--STKRDKGPSARGLAAAIEDSSIDI 152
           FDPLG+  + S+ LS     +F G     F SSS     R+K  S RG AAAIEDSSIDI
Sbjct: 74  FDPLGLYEEGSNSLSRSPLSTFFGIMAPVFGSSSGGGASREKA-SGRGAAAAIEDSSIDI 133

Query: 153 GDFFKGPLPGKFLQLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIG 212
           GDFFKGPLPGKFL+LLG+LALSRLG+YIPLGGVNREAF GNLDQNSLL TLDSFSGGGIG
Sbjct: 134 GDFFKGPLPGKFLKLLGFLALSRLGVYIPLGGVNREAFAGNLDQNSLLGTLDSFSGGGIG 193

Query: 213 RLGICSLGIVPFINASIVFQLLTQIYPKLQELQKREGEAGRKKILQYTRYASVGFAIVQA 272
           RLGICSLGIVPFINA IVFQLL Q+YPKLQ+LQ++EGEAGRKK+LQYTRYASVGFAIVQA
Sbjct: 194 RLGICSLGIVPFINAQIVFQLLAQLYPKLQDLQRKEGEAGRKKVLQYTRYASVGFAIVQA 253

Query: 273 IGQVLYLRPYVNDFSTEWVLSSVTLLTLGSVITTYIGERITDLKLGNGTSLLIFTSIISY 332
           IGQVLYLRPYVNDFSTEWVL+SVTLLTLGSV TT+IGERI+DLKLGNGTSLLIFTSIISY
Sbjct: 254 IGQVLYLRPYVNDFSTEWVLTSVTLLTLGSVFTTFIGERISDLKLGNGTSLLIFTSIISY 313

Query: 333 LPASFGRTAAQALQDGNYVGLVAIIISFFLLVLGIVYVQEAERKIPLNYASRYTSSGGGL 392
           LPASFGRT AQA QDGNYVGL+ II+SF LLVLGIVYVQEAERKIPLNYASRY+S  G L
Sbjct: 314 LPASFGRTVAQAFQDGNYVGLLTIILSFLLLVLGIVYVQEAERKIPLNYASRYSSRTGEL 373

Query: 393 QKSAYLPFKVNSSGVMPIIFSTSTLSLPGTLARFTGLSVLKNAAFALNPGGSFYLPTNIL 452
           Q+SAYLPFKVNSSGVMPIIFSTS+L+LPGTLARF+GL  LK AA ALNPGG+ YLPTN+L
Sbjct: 374 QRSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFSGLDFLKKAAIALNPGGALYLPTNVL 433

Query: 453 LIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTASFLKAVLSRISVLGSAFLAI 512
           LIAFFNYYYTFLQLDPDD+SEQLKRQGASIPLVRPGKSTA+++K VL+RISVLGSAFLA+
Sbjct: 434 LIAFFNYYYTFLQLDPDDLSEQLKRQGASIPLVRPGKSTAAYIKTVLNRISVLGSAFLAV 493

Query: 513 LAAGPAVIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDIDRY 569
           LAAGP+++EQT+HLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYD++R+
Sbjct: 494 LAAGPSLVEQTSHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDVNRF 551

[Close]

BLAST of Cp4.1LG04g12930 vs. ExPASy Swiss-Prot
Match: Q9XQU4 (Preprotein translocase subunit SECY, chloroplastic OS=Pisum sativum OX=3888 GN=SECY PE=2 SV=1)

HSP 1 Score: 765.0 bits (1974), Expect = 6.0e-220
Identity = 408/533 (76.55%), Postives = 452/533 (84.80%), Query Frame = 0


Query: 46  PNKPRATKSWNLGLTSNREGVSPEELGRTVSRCFLSKIMLLRAESSV----------FDP 105
           P+      S N  L   +  +SP  L  +  +  LS  + LR+ SS           FDP
Sbjct: 8   PSPTLRCSSLNRRLIPTKHNLSPRLLRSSFRQHNLS--LRLRSSSSSNLYTSCDLANFDP 67

Query: 106 LGIRPDLSSELSCGWESFLGFWGQTFDSSSSTKRDKGPSARGLAAAIEDSSIDIGDFFKG 165
           LGI PDLSS  S  W + L  +       +S+++DK    RG+AAAIEDSSID GDFF G
Sbjct: 68  LGINPDLSS--SSTWRNLLTIF------QTSSQKDK---PRGVAAAIEDSSIDFGDFFNG 127

Query: 166 PLPGKFLQLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICS 225
           PLPGKFL+LLG+LALSRLG+YIPLGGVNR+AF+GNLDQNSLL+TLDSFSGGGIGRLGICS
Sbjct: 128 PLPGKFLKLLGFLALSRLGVYIPLGGVNRDAFLGNLDQNSLLTTLDSFSGGGIGRLGICS 187

Query: 226 LGIVPFINASIVFQLLTQIYPKLQELQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLY 285
           LGIVPFINA IVFQLL Q+YPKLQ+LQK+EGEAGRKK+LQYTRYASVGFAIVQAIGQVL+
Sbjct: 188 LGIVPFINAQIVFQLLAQVYPKLQDLQKKEGEAGRKKLLQYTRYASVGFAIVQAIGQVLF 247

Query: 286 LRPYVNDFSTEWVLSSVTLLTLGSVITTYIGERITDLKLGNGTSLLIFTSIISYLPASFG 345
           LRPY NDF+TEW L+SV LLTLGSV TTYIGE+IT+LKLGNGTSLLIFT+IISYLPASFG
Sbjct: 248 LRPYANDFTTEWALTSVILLTLGSVFTTYIGEQITELKLGNGTSLLIFTNIISYLPASFG 307

Query: 346 RTAAQALQDGNYVGLVAIIISFFLLVLGIVYVQEAERKIPLNYASRYTSSGGGLQKSAYL 405
           RT +QA  D NYVGLV II+SFFLLVLGIVYVQEAERKIP+NYASR+TS  GG++KSAYL
Sbjct: 308 RTFSQAFSDANYVGLVTIIVSFFLLVLGIVYVQEAERKIPINYASRFTSKSGGIEKSAYL 367

Query: 406 PFKVNSSGVMPIIFSTSTLSLPGTLARFTGLSVLKNAAFALNPGGSFYLPTNILLIAFFN 465
           PFKVNSSGVMPIIFSTS+L+LPGTLARFTGLS LK AA ALNPGGSFYLP NILLIAFFN
Sbjct: 368 PFKVNSSGVMPIIFSTSSLALPGTLARFTGLSSLKTAAVALNPGGSFYLPFNILLIAFFN 427

Query: 466 YYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTASFLKAVLSRISVLGSAFLAILAAGPA 525
           YYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTA+F+K VLSRISVLGS FLAILAAGPA
Sbjct: 428 YYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTATFIKTVLSRISVLGSTFLAILAAGPA 487

Query: 526 VIEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDIDRY 569
           V+EQT HLTAFRGFAGTS+LILVGCATDTARKV+AEIISQKYKNIE YD D+Y
Sbjct: 488 VVEQTAHLTAFRGFAGTSILILVGCATDTARKVRAEIISQKYKNIELYDFDKY 527

[Close]

BLAST of Cp4.1LG04g12930 vs. NCBI nr
Match: XP_023529855.1 (preprotein translocase subunit SCY1, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1034 bits (2674), Expect = 0.0
Identity = 545/570 (95.61%), Postives = 545/570 (95.61%), Query Frame = 0


Query: 1   MLISVREAAAASSSPLCFTLSAQYLTNSKRFPRPRLSFTRASFSVPNKPRATKSWNLGLT 60
           MLISVREAAAASSSPLCFTLSAQYLTNSKRFPRPRLSFTRASFSVPNKPRATKSWNLGLT
Sbjct: 1   MLISVREAAAASSSPLCFTLSAQYLTNSKRFPRPRLSFTRASFSVPNKPRATKSWNLGLT 60

Query: 61  SNREGVSPEELGRTVSRCFLSKIMLLRAESSVFDPLGIRPDLSSELSCGWESFLGFWGQT 120
           SN                         AESSVFDPLGIRPDLSSELSCGWESFLGFWGQT
Sbjct: 61  SNS------------------------AESSVFDPLGIRPDLSSELSCGWESFLGFWGQT 120

Query: 121 FDSSSSTKRDKGPSARGLAAAIEDSSIDIGDFFKGPLPGKFLQLLGYLALSRLGIYIPLG 180
           FDSSSSTKRDKGPSARGLAAAIEDSSIDIGDFFKGPLPGKFLQLLGYLALSRLGIYIPLG
Sbjct: 121 FDSSSSTKRDKGPSARGLAAAIEDSSIDIGDFFKGPLPGKFLQLLGYLALSRLGIYIPLG 180

Query: 181 GVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINASIVFQLLTQIYPKLQE 240
           GVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINASIVFQLLTQIYPKLQE
Sbjct: 181 GVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINASIVFQLLTQIYPKLQE 240

Query: 241 LQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTEWVLSSVTLLTLGSV 300
           LQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTEWVLSSVTLLTLGSV
Sbjct: 241 LQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTEWVLSSVTLLTLGSV 300

Query: 301 ITTYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTAAQALQDGNYVGLVAIIISFFLL 360
           ITTYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTAAQALQDGNYVGLVAIIISFFLL
Sbjct: 301 ITTYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTAAQALQDGNYVGLVAIIISFFLL 360

Query: 361 VLGIVYVQEAERKIPLNYASRYTSSGGGLQKSAYLPFKVNSSGVMPIIFSTSTLSLPGTL 420
           VLGIVYVQEAERKIPLNYASRYTSSGGGLQKSAYLPFKVNSSGVMPIIFSTSTLSLPGTL
Sbjct: 361 VLGIVYVQEAERKIPLNYASRYTSSGGGLQKSAYLPFKVNSSGVMPIIFSTSTLSLPGTL 420

Query: 421 ARFTGLSVLKNAAFALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIP 480
           ARFTGLSVLKNAAFALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIP
Sbjct: 421 ARFTGLSVLKNAAFALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIP 480

Query: 481 LVRPGKSTASFLKAVLSRISVLGSAFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGC 540
           LVRPGKSTASFLKAVLSRISVLGSAFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGC
Sbjct: 481 LVRPGKSTASFLKAVLSRISVLGSAFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGC 540

Query: 541 ATDTARKVQAEIISQKYKNIEFYDIDRYTP 570
           ATDTARKVQAEIISQKYKNIEFYDIDRYTP
Sbjct: 541 ATDTARKVQAEIISQKYKNIEFYDIDRYTP 546

[Close]

BLAST of Cp4.1LG04g12930 vs. NCBI nr
Match: XP_022928962.1 (preprotein translocase subunit SCY1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 1031 bits (2667), Expect = 0.0
Identity = 543/570 (95.26%), Postives = 544/570 (95.44%), Query Frame = 0


Query: 1   MLISVREAAAASSSPLCFTLSAQYLTNSKRFPRPRLSFTRASFSVPNKPRATKSWNLGLT 60
           MLISVREAAAASSSPLCFTLS QYLTNSKRFPRPRLSFTRASFSVPNKPRATKSWNLGLT
Sbjct: 1   MLISVREAAAASSSPLCFTLSTQYLTNSKRFPRPRLSFTRASFSVPNKPRATKSWNLGLT 60

Query: 61  SNREGVSPEELGRTVSRCFLSKIMLLRAESSVFDPLGIRPDLSSELSCGWESFLGFWGQT 120
           SN                         +ESSVFDPLGIRPDLSSELSCGWESFLGFWGQT
Sbjct: 61  SNS------------------------SESSVFDPLGIRPDLSSELSCGWESFLGFWGQT 120

Query: 121 FDSSSSTKRDKGPSARGLAAAIEDSSIDIGDFFKGPLPGKFLQLLGYLALSRLGIYIPLG 180
           FDSSSSTKRDKGPSARGLAAAIEDSSIDIGDFFKGPLPGKFLQLLGYLALSRLGIYIPLG
Sbjct: 121 FDSSSSTKRDKGPSARGLAAAIEDSSIDIGDFFKGPLPGKFLQLLGYLALSRLGIYIPLG 180

Query: 181 GVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINASIVFQLLTQIYPKLQE 240
           GVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINASIVFQLLTQIYPKLQE
Sbjct: 181 GVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINASIVFQLLTQIYPKLQE 240

Query: 241 LQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTEWVLSSVTLLTLGSV 300
           LQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTEWVLSSVTLLTLGSV
Sbjct: 241 LQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTEWVLSSVTLLTLGSV 300

Query: 301 ITTYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTAAQALQDGNYVGLVAIIISFFLL 360
           ITTYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTAAQALQDGNYVGLVAIIISFFLL
Sbjct: 301 ITTYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTAAQALQDGNYVGLVAIIISFFLL 360

Query: 361 VLGIVYVQEAERKIPLNYASRYTSSGGGLQKSAYLPFKVNSSGVMPIIFSTSTLSLPGTL 420
           VLGIVYVQEAERKIPLNYASRYTSSGGGLQKSAYLPFKVNSSGVMPIIFSTSTLSLPGTL
Sbjct: 361 VLGIVYVQEAERKIPLNYASRYTSSGGGLQKSAYLPFKVNSSGVMPIIFSTSTLSLPGTL 420

Query: 421 ARFTGLSVLKNAAFALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIP 480
           ARFTGLSVLKNAAFALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIP
Sbjct: 421 ARFTGLSVLKNAAFALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIP 480

Query: 481 LVRPGKSTASFLKAVLSRISVLGSAFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGC 540
           LVRPGKSTASFLKAVLSRISVLGSAFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGC
Sbjct: 481 LVRPGKSTASFLKAVLSRISVLGSAFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGC 540

Query: 541 ATDTARKVQAEIISQKYKNIEFYDIDRYTP 570
           ATDTARKVQAEIISQKYKNIEFYDIDRYTP
Sbjct: 541 ATDTARKVQAEIISQKYKNIEFYDIDRYTP 546

[Close]

BLAST of Cp4.1LG04g12930 vs. NCBI nr
Match: XP_022971656.1 (preprotein translocase subunit SCY1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 1030 bits (2662), Expect = 0.0
Identity = 542/570 (95.09%), Postives = 543/570 (95.26%), Query Frame = 0


Query: 1   MLISVREAAAASSSPLCFTLSAQYLTNSKRFPRPRLSFTRASFSVPNKPRATKSWNLGLT 60
           MLI VREAAAASSSPLCFTLS QYLTNSKRFPRPRLSFTRASFSVPNKPRATKSWNLGLT
Sbjct: 1   MLIPVREAAAASSSPLCFTLSTQYLTNSKRFPRPRLSFTRASFSVPNKPRATKSWNLGLT 60

Query: 61  SNREGVSPEELGRTVSRCFLSKIMLLRAESSVFDPLGIRPDLSSELSCGWESFLGFWGQT 120
           SN                         +ESSVFDPLGIRPDLSSELSCGWESFLGFWGQT
Sbjct: 61  SNS------------------------SESSVFDPLGIRPDLSSELSCGWESFLGFWGQT 120

Query: 121 FDSSSSTKRDKGPSARGLAAAIEDSSIDIGDFFKGPLPGKFLQLLGYLALSRLGIYIPLG 180
           FDSSSSTKRDKGPSARGLAAAIEDSSIDIGDFFKGPLPGKFLQLLGYLALSRLGIYIPLG
Sbjct: 121 FDSSSSTKRDKGPSARGLAAAIEDSSIDIGDFFKGPLPGKFLQLLGYLALSRLGIYIPLG 180

Query: 181 GVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINASIVFQLLTQIYPKLQE 240
           GVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINASIVFQLLTQIYPKLQE
Sbjct: 181 GVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINASIVFQLLTQIYPKLQE 240

Query: 241 LQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTEWVLSSVTLLTLGSV 300
           LQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTEWVLSSVTLLTLGSV
Sbjct: 241 LQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTEWVLSSVTLLTLGSV 300

Query: 301 ITTYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTAAQALQDGNYVGLVAIIISFFLL 360
           ITTYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTAAQALQDGNYVGLVAIIISFFLL
Sbjct: 301 ITTYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTAAQALQDGNYVGLVAIIISFFLL 360

Query: 361 VLGIVYVQEAERKIPLNYASRYTSSGGGLQKSAYLPFKVNSSGVMPIIFSTSTLSLPGTL 420
           VLGIVYVQEAERKIPLNYASRYTSSGGGLQKSAYLPFKVNSSGVMPIIFSTSTLSLPGTL
Sbjct: 361 VLGIVYVQEAERKIPLNYASRYTSSGGGLQKSAYLPFKVNSSGVMPIIFSTSTLSLPGTL 420

Query: 421 ARFTGLSVLKNAAFALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIP 480
           ARFTGLSVLKNAAFALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIP
Sbjct: 421 ARFTGLSVLKNAAFALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIP 480

Query: 481 LVRPGKSTASFLKAVLSRISVLGSAFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGC 540
           LVRPGKSTASFLKAVLSRISVLGSAFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGC
Sbjct: 481 LVRPGKSTASFLKAVLSRISVLGSAFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGC 540

Query: 541 ATDTARKVQAEIISQKYKNIEFYDIDRYTP 570
           ATDTARKVQAEIISQKYKNIEFYDIDRYTP
Sbjct: 541 ATDTARKVQAEIISQKYKNIEFYDIDRYTP 546

[Close]

BLAST of Cp4.1LG04g12930 vs. NCBI nr
Match: KAG7035717.1 (Preprotein translocase subunit SCY1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1028 bits (2657), Expect = 0.0
Identity = 542/570 (95.09%), Postives = 543/570 (95.26%), Query Frame = 0


Query: 1   MLISVREAAAASSSPLCFTLSAQYLTNSKRFPRPRLSFTRASFSVPNKPRATKSWNLGLT 60
           MLISVREAAAASSSPLCFTLS QYLTNSKRFPR RLSFTRASFSVPNKPRATKSWNLGLT
Sbjct: 1   MLISVREAAAASSSPLCFTLSTQYLTNSKRFPRLRLSFTRASFSVPNKPRATKSWNLGLT 60

Query: 61  SNREGVSPEELGRTVSRCFLSKIMLLRAESSVFDPLGIRPDLSSELSCGWESFLGFWGQT 120
           SN                         +ESSVFDPLGIRPDLSSELSCGWESFLGFWGQT
Sbjct: 61  SNS------------------------SESSVFDPLGIRPDLSSELSCGWESFLGFWGQT 120

Query: 121 FDSSSSTKRDKGPSARGLAAAIEDSSIDIGDFFKGPLPGKFLQLLGYLALSRLGIYIPLG 180
           FDSSSSTKRDKGPSARGLAAAIEDSSIDIGDFFKGPLPGKFLQLLGYLALSRLGIYIPLG
Sbjct: 121 FDSSSSTKRDKGPSARGLAAAIEDSSIDIGDFFKGPLPGKFLQLLGYLALSRLGIYIPLG 180

Query: 181 GVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINASIVFQLLTQIYPKLQE 240
           GVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINASIVFQLLTQIYPKLQE
Sbjct: 181 GVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINASIVFQLLTQIYPKLQE 240

Query: 241 LQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTEWVLSSVTLLTLGSV 300
           LQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTEWVLSSVTLLTLGSV
Sbjct: 241 LQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTEWVLSSVTLLTLGSV 300

Query: 301 ITTYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTAAQALQDGNYVGLVAIIISFFLL 360
           ITTYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTAAQALQDGNYVGLVAIIISFFLL
Sbjct: 301 ITTYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTAAQALQDGNYVGLVAIIISFFLL 360

Query: 361 VLGIVYVQEAERKIPLNYASRYTSSGGGLQKSAYLPFKVNSSGVMPIIFSTSTLSLPGTL 420
           VLGIVYVQEAERKIPLNYASRYTSSGGGLQKSAYLPFKVNSSGVMPIIFSTSTLSLPGTL
Sbjct: 361 VLGIVYVQEAERKIPLNYASRYTSSGGGLQKSAYLPFKVNSSGVMPIIFSTSTLSLPGTL 420

Query: 421 ARFTGLSVLKNAAFALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIP 480
           ARFTGLSVLKNAAFALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIP
Sbjct: 421 ARFTGLSVLKNAAFALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIP 480

Query: 481 LVRPGKSTASFLKAVLSRISVLGSAFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGC 540
           LVRPGKSTASFLKAVLSRISVLGSAFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGC
Sbjct: 481 LVRPGKSTASFLKAVLSRISVLGSAFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGC 540

Query: 541 ATDTARKVQAEIISQKYKNIEFYDIDRYTP 570
           ATDTARKVQAEIISQKYKNIEFYDIDRYTP
Sbjct: 541 ATDTARKVQAEIISQKYKNIEFYDIDRYTP 546

[Close]

BLAST of Cp4.1LG04g12930 vs. NCBI nr
Match: KAG6587780.1 (Preprotein translocase subunit SCY1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1025 bits (2651), Expect = 0.0
Identity = 538/568 (94.72%), Postives = 541/568 (95.25%), Query Frame = 0


Query: 3    ISVREAAAASSSPLCFTLSAQYLTNSKRFPRPRLSFTRASFSVPNKPRATKSWNLGLTSN 62
            + +REAAAASSSPLCFTLS QYLTNSKRFPRPRLSFTRASFSVPNKPRATKSWNLGLTSN
Sbjct: 1020 LPIREAAAASSSPLCFTLSTQYLTNSKRFPRPRLSFTRASFSVPNKPRATKSWNLGLTSN 1079

Query: 63   REGVSPEELGRTVSRCFLSKIMLLRAESSVFDPLGIRPDLSSELSCGWESFLGFWGQTFD 122
                                     +ESSVFDPLGIRPDLSSELSCGWESFLGFWGQTFD
Sbjct: 1080 S------------------------SESSVFDPLGIRPDLSSELSCGWESFLGFWGQTFD 1139

Query: 123  SSSSTKRDKGPSARGLAAAIEDSSIDIGDFFKGPLPGKFLQLLGYLALSRLGIYIPLGGV 182
            SSSSTKRDKGPSARGLAAAIEDSSIDIGDFFKGPLPGKFLQLLGYLALSRLGIYIPLGGV
Sbjct: 1140 SSSSTKRDKGPSARGLAAAIEDSSIDIGDFFKGPLPGKFLQLLGYLALSRLGIYIPLGGV 1199

Query: 183  NREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINASIVFQLLTQIYPKLQELQ 242
            NREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINASIVFQLLTQIYPKLQELQ
Sbjct: 1200 NREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINASIVFQLLTQIYPKLQELQ 1259

Query: 243  KREGEAGRKKILQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTEWVLSSVTLLTLGSVIT 302
            KREGEAGRKKILQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTEWVLSSVTLLTLGSVIT
Sbjct: 1260 KREGEAGRKKILQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTEWVLSSVTLLTLGSVIT 1319

Query: 303  TYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTAAQALQDGNYVGLVAIIISFFLLVL 362
            TYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTAAQALQDGNYVGLVAIIISFFLLVL
Sbjct: 1320 TYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTAAQALQDGNYVGLVAIIISFFLLVL 1379

Query: 363  GIVYVQEAERKIPLNYASRYTSSGGGLQKSAYLPFKVNSSGVMPIIFSTSTLSLPGTLAR 422
            GIVYVQEAERKIPLNYASRYTSSGGGLQKSAYLPFKVNSSGVMPIIFSTSTLSLPGTLAR
Sbjct: 1380 GIVYVQEAERKIPLNYASRYTSSGGGLQKSAYLPFKVNSSGVMPIIFSTSTLSLPGTLAR 1439

Query: 423  FTGLSVLKNAAFALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLV 482
            FTGLSVLKNAAFALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLV
Sbjct: 1440 FTGLSVLKNAAFALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLV 1499

Query: 483  RPGKSTASFLKAVLSRISVLGSAFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCAT 542
            RPGKSTASFLKAVLSRISVLGSAFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCAT
Sbjct: 1500 RPGKSTASFLKAVLSRISVLGSAFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGCAT 1559

Query: 543  DTARKVQAEIISQKYKNIEFYDIDRYTP 570
            DTARKVQAEIISQKYKNIEFYDIDRYTP
Sbjct: 1560 DTARKVQAEIISQKYKNIEFYDIDRYTP 1563

[Close]

BLAST of Cp4.1LG04g12930 vs. ExPASy TrEMBL
Match: A0A6J1ELF1 (CpSecY OS=Cucurbita moschata OX=3662 GN=LOC111435704 PE=3 SV=1)

HSP 1 Score: 1031 bits (2667), Expect = 0.0
Identity = 543/570 (95.26%), Postives = 544/570 (95.44%), Query Frame = 0


Query: 1   MLISVREAAAASSSPLCFTLSAQYLTNSKRFPRPRLSFTRASFSVPNKPRATKSWNLGLT 60
           MLISVREAAAASSSPLCFTLS QYLTNSKRFPRPRLSFTRASFSVPNKPRATKSWNLGLT
Sbjct: 1   MLISVREAAAASSSPLCFTLSTQYLTNSKRFPRPRLSFTRASFSVPNKPRATKSWNLGLT 60

Query: 61  SNREGVSPEELGRTVSRCFLSKIMLLRAESSVFDPLGIRPDLSSELSCGWESFLGFWGQT 120
           SN                         +ESSVFDPLGIRPDLSSELSCGWESFLGFWGQT
Sbjct: 61  SNS------------------------SESSVFDPLGIRPDLSSELSCGWESFLGFWGQT 120

Query: 121 FDSSSSTKRDKGPSARGLAAAIEDSSIDIGDFFKGPLPGKFLQLLGYLALSRLGIYIPLG 180
           FDSSSSTKRDKGPSARGLAAAIEDSSIDIGDFFKGPLPGKFLQLLGYLALSRLGIYIPLG
Sbjct: 121 FDSSSSTKRDKGPSARGLAAAIEDSSIDIGDFFKGPLPGKFLQLLGYLALSRLGIYIPLG 180

Query: 181 GVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINASIVFQLLTQIYPKLQE 240
           GVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINASIVFQLLTQIYPKLQE
Sbjct: 181 GVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINASIVFQLLTQIYPKLQE 240

Query: 241 LQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTEWVLSSVTLLTLGSV 300
           LQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTEWVLSSVTLLTLGSV
Sbjct: 241 LQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTEWVLSSVTLLTLGSV 300

Query: 301 ITTYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTAAQALQDGNYVGLVAIIISFFLL 360
           ITTYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTAAQALQDGNYVGLVAIIISFFLL
Sbjct: 301 ITTYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTAAQALQDGNYVGLVAIIISFFLL 360

Query: 361 VLGIVYVQEAERKIPLNYASRYTSSGGGLQKSAYLPFKVNSSGVMPIIFSTSTLSLPGTL 420
           VLGIVYVQEAERKIPLNYASRYTSSGGGLQKSAYLPFKVNSSGVMPIIFSTSTLSLPGTL
Sbjct: 361 VLGIVYVQEAERKIPLNYASRYTSSGGGLQKSAYLPFKVNSSGVMPIIFSTSTLSLPGTL 420

Query: 421 ARFTGLSVLKNAAFALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIP 480
           ARFTGLSVLKNAAFALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIP
Sbjct: 421 ARFTGLSVLKNAAFALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIP 480

Query: 481 LVRPGKSTASFLKAVLSRISVLGSAFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGC 540
           LVRPGKSTASFLKAVLSRISVLGSAFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGC
Sbjct: 481 LVRPGKSTASFLKAVLSRISVLGSAFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGC 540

Query: 541 ATDTARKVQAEIISQKYKNIEFYDIDRYTP 570
           ATDTARKVQAEIISQKYKNIEFYDIDRYTP
Sbjct: 541 ATDTARKVQAEIISQKYKNIEFYDIDRYTP 546

[Close]

BLAST of Cp4.1LG04g12930 vs. ExPASy TrEMBL
Match: A0A6J1I3V7 (CpSecY OS=Cucurbita maxima OX=3661 GN=LOC111470336 PE=3 SV=1)

HSP 1 Score: 1030 bits (2662), Expect = 0.0
Identity = 542/570 (95.09%), Postives = 543/570 (95.26%), Query Frame = 0


Query: 1   MLISVREAAAASSSPLCFTLSAQYLTNSKRFPRPRLSFTRASFSVPNKPRATKSWNLGLT 60
           MLI VREAAAASSSPLCFTLS QYLTNSKRFPRPRLSFTRASFSVPNKPRATKSWNLGLT
Sbjct: 1   MLIPVREAAAASSSPLCFTLSTQYLTNSKRFPRPRLSFTRASFSVPNKPRATKSWNLGLT 60

Query: 61  SNREGVSPEELGRTVSRCFLSKIMLLRAESSVFDPLGIRPDLSSELSCGWESFLGFWGQT 120
           SN                         +ESSVFDPLGIRPDLSSELSCGWESFLGFWGQT
Sbjct: 61  SNS------------------------SESSVFDPLGIRPDLSSELSCGWESFLGFWGQT 120

Query: 121 FDSSSSTKRDKGPSARGLAAAIEDSSIDIGDFFKGPLPGKFLQLLGYLALSRLGIYIPLG 180
           FDSSSSTKRDKGPSARGLAAAIEDSSIDIGDFFKGPLPGKFLQLLGYLALSRLGIYIPLG
Sbjct: 121 FDSSSSTKRDKGPSARGLAAAIEDSSIDIGDFFKGPLPGKFLQLLGYLALSRLGIYIPLG 180

Query: 181 GVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINASIVFQLLTQIYPKLQE 240
           GVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINASIVFQLLTQIYPKLQE
Sbjct: 181 GVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINASIVFQLLTQIYPKLQE 240

Query: 241 LQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTEWVLSSVTLLTLGSV 300
           LQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTEWVLSSVTLLTLGSV
Sbjct: 241 LQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTEWVLSSVTLLTLGSV 300

Query: 301 ITTYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTAAQALQDGNYVGLVAIIISFFLL 360
           ITTYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTAAQALQDGNYVGLVAIIISFFLL
Sbjct: 301 ITTYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTAAQALQDGNYVGLVAIIISFFLL 360

Query: 361 VLGIVYVQEAERKIPLNYASRYTSSGGGLQKSAYLPFKVNSSGVMPIIFSTSTLSLPGTL 420
           VLGIVYVQEAERKIPLNYASRYTSSGGGLQKSAYLPFKVNSSGVMPIIFSTSTLSLPGTL
Sbjct: 361 VLGIVYVQEAERKIPLNYASRYTSSGGGLQKSAYLPFKVNSSGVMPIIFSTSTLSLPGTL 420

Query: 421 ARFTGLSVLKNAAFALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIP 480
           ARFTGLSVLKNAAFALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIP
Sbjct: 421 ARFTGLSVLKNAAFALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIP 480

Query: 481 LVRPGKSTASFLKAVLSRISVLGSAFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGC 540
           LVRPGKSTASFLKAVLSRISVLGSAFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGC
Sbjct: 481 LVRPGKSTASFLKAVLSRISVLGSAFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVGC 540

Query: 541 ATDTARKVQAEIISQKYKNIEFYDIDRYTP 570
           ATDTARKVQAEIISQKYKNIEFYDIDRYTP
Sbjct: 541 ATDTARKVQAEIISQKYKNIEFYDIDRYTP 546

[Close]

BLAST of Cp4.1LG04g12930 vs. ExPASy TrEMBL
Match: A0A6J1C141 (CpSecY OS=Momordica charantia OX=3673 GN=LOC111007412 PE=3 SV=1)

HSP 1 Score: 974 bits (2518), Expect = 0.0
Identity = 514/571 (90.02%), Postives = 530/571 (92.82%), Query Frame = 0


Query: 1   MLISVREAAAASSSPLCFTLSAQYLTNSKRFPRPRLSFTRASFSVPNKPRATKSWNLGLT 60
           MLI+VREAAAASSSPLCFTLS Q LTNSKRFPRPR S  RASFSVP KP   KSWNLGL 
Sbjct: 1   MLITVREAAAASSSPLCFTLSTQSLTNSKRFPRPRGSVCRASFSVPRKPSPRKSWNLGLI 60

Query: 61  SNR-EGVSPEELGRTVSRCFLSKIMLLRAESSVFDPLGIRPDLSSELSCGWESFLGFWGQ 120
           SNR  G  P+   ++   C  S      +ESSVFDPLGIRPDLSSELS  W +FLG  GQ
Sbjct: 61  SNRCHGQRPQSYAKSDPNCQGS------SESSVFDPLGIRPDLSSELSSTWGNFLGLLGQ 120

Query: 121 TFDSSSSTKRDKGPSARGLAAAIEDSSIDIGDFFKGPLPGKFLQLLGYLALSRLGIYIPL 180
           TF+SSSSTK+DK PSARGLAAAIEDSSIDIGDFFKGPLPGKFL+LLGYLALSRLGIY+PL
Sbjct: 121 TFESSSSTKKDKSPSARGLAAAIEDSSIDIGDFFKGPLPGKFLKLLGYLALSRLGIYVPL 180

Query: 181 GGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINASIVFQLLTQIYPKLQ 240
           GGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINA IVFQLL QIYPKLQ
Sbjct: 181 GGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQIYPKLQ 240

Query: 241 ELQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTEWVLSSVTLLTLGS 300
           +LQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTEWVLSSVTLLTLGS
Sbjct: 241 DLQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTEWVLSSVTLLTLGS 300

Query: 301 VITTYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTAAQALQDGNYVGLVAIIISFFL 360
           V+TTYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTAAQA QDGNYVGLVAII SFFL
Sbjct: 301 VLTTYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTAAQAFQDGNYVGLVAIIFSFFL 360

Query: 361 LVLGIVYVQEAERKIPLNYASRYTSSGGGLQKSAYLPFKVNSSGVMPIIFSTSTLSLPGT 420
           LVLGIVYVQEAERKIP+NYASRYTS GGGLQKSAYLPFKVNSSGVMPIIFSTSTL+LPGT
Sbjct: 361 LVLGIVYVQEAERKIPINYASRYTSRGGGLQKSAYLPFKVNSSGVMPIIFSTSTLALPGT 420

Query: 421 LARFTGLSVLKNAAFALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASI 480
           LARFTG+SVLK AA ALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASI
Sbjct: 421 LARFTGVSVLKKAALALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASI 480

Query: 481 PLVRPGKSTASFLKAVLSRISVLGSAFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVG 540
           PLVRPGK+TASFLKAVLSRISVLGSAFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVG
Sbjct: 481 PLVRPGKTTASFLKAVLSRISVLGSAFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVG 540

Query: 541 CATDTARKVQAEIISQKYKNIEFYDIDRYTP 570
           CATDTARKVQAEIISQKYKNIEFYDIDRYTP
Sbjct: 541 CATDTARKVQAEIISQKYKNIEFYDIDRYTP 565

[Close]

BLAST of Cp4.1LG04g12930 vs. ExPASy TrEMBL
Match: A0A5D3BAF5 (CpSecY OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold271G00040 PE=3 SV=1)

HSP 1 Score: 968 bits (2502), Expect = 0.0
Identity = 513/571 (89.84%), Postives = 525/571 (91.94%), Query Frame = 0


Query: 1   MLISVREAAAASSS-PLCFTLSAQYLTNSKRFPRPRLSFTRASFSVPNKPRATKSWNLGL 60
           MLI+ REAAAASSS PLCFTLS Q LTNSKRFPRPR+S  RASFSVP KP + KSWNLGL
Sbjct: 1   MLITFREAAAASSSSPLCFTLSTQSLTNSKRFPRPRISLARASFSVPGKPSSIKSWNLGL 60

Query: 61  TSNREGVSPEELGRTVSRCFLSKIMLLRAESSVFDPLGIRPDLSSELSCGWESFLGFWGQ 120
            SN                         +ESSVFDPLGIRPDLSSELS  WESFLG++GQ
Sbjct: 61  ISNS------------------------SESSVFDPLGIRPDLSSELSSTWESFLGYFGQ 120

Query: 121 TFDSSSSTKRDKGPSARGLAAAIEDSSIDIGDFFKGPLPGKFLQLLGYLALSRLGIYIPL 180
           TF+S+SSTK+DK PSARGLAAAIEDSSIDIGDFFKGPLPGKFLQLLGYLALSRLGIYIPL
Sbjct: 121 TFNSASSTKKDKSPSARGLAAAIEDSSIDIGDFFKGPLPGKFLQLLGYLALSRLGIYIPL 180

Query: 181 GGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINASIVFQLLTQIYPKLQ 240
           GGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINA IVFQLL QIYPKLQ
Sbjct: 181 GGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQIYPKLQ 240

Query: 241 ELQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTEWVLSSVTLLTLGS 300
           +LQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTEWVLSSVTLLTLGS
Sbjct: 241 DLQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTEWVLSSVTLLTLGS 300

Query: 301 VITTYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTAAQALQDGNYVGLVAIIISFFL 360
           VITTYIGERITDLKLGNGTSLLIFTSIISYLPASFGRT AQA QDGNYVGLVAI+ISFFL
Sbjct: 301 VITTYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTTAQAFQDGNYVGLVAIMISFFL 360

Query: 361 LVLGIVYVQEAERKIPLNYASRYTSSGGGLQKSAYLPFKVNSSGVMPIIFSTSTLSLPGT 420
           LVLGIVYVQEAERKIPLNYASRYTS GGGLQKSAYLPFKVNSSGVMPIIFSTSTL+LPGT
Sbjct: 361 LVLGIVYVQEAERKIPLNYASRYTSRGGGLQKSAYLPFKVNSSGVMPIIFSTSTLALPGT 420

Query: 421 LARFTGLSVLKNAAFALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASI 480
           LARFTGLSVLK AA ALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASI
Sbjct: 421 LARFTGLSVLKKAALALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASI 480

Query: 481 PLVRPGKSTASFLKAVLSRISVLGSAFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVG 540
           PLVRPGKSTASFLKAVLSRISVLGSAFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVG
Sbjct: 481 PLVRPGKSTASFLKAVLSRISVLGSAFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVG 540

Query: 541 CATDTARKVQAEIISQKYKNIEFYDIDRYTP 570
           CATDTARKVQAEIISQKYKNIEFYDIDRY P
Sbjct: 541 CATDTARKVQAEIISQKYKNIEFYDIDRYNP 547

[Close]

BLAST of Cp4.1LG04g12930 vs. ExPASy TrEMBL
Match: A0A5A7T100 (CpSecY OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G002190 PE=3 SV=1)

HSP 1 Score: 964 bits (2491), Expect = 0.0
Identity = 512/571 (89.67%), Postives = 524/571 (91.77%), Query Frame = 0


Query: 1   MLISVREAAAASSS-PLCFTLSAQYLTNSKRFPRPRLSFTRASFSVPNKPRATKSWNLGL 60
           MLI+ REAAAASSS PLCFTLS Q LTNSKRFPRPR+S  RASFSVP KP + KSWNLGL
Sbjct: 1   MLITFREAAAASSSSPLCFTLSTQSLTNSKRFPRPRISLARASFSVPGKPSSIKSWNLGL 60

Query: 61  TSNREGVSPEELGRTVSRCFLSKIMLLRAESSVFDPLGIRPDLSSELSCGWESFLGFWGQ 120
            SN                         +ESSVFDPLGIRPDLSSELS  WESFLG++GQ
Sbjct: 61  ISNS------------------------SESSVFDPLGIRPDLSSELSSTWESFLGYFGQ 120

Query: 121 TFDSSSSTKRDKGPSARGLAAAIEDSSIDIGDFFKGPLPGKFLQLLGYLALSRLGIYIPL 180
           TF+S+SSTK+DK PSARGLAAAIEDSSIDIGDFFKGPLPGKFLQLLGYLALSRLGIYIPL
Sbjct: 121 TFNSASSTKKDKSPSARGLAAAIEDSSIDIGDFFKGPLPGKFLQLLGYLALSRLGIYIPL 180

Query: 181 GGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINASIVFQLLTQIYPKLQ 240
           GGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINA IVFQLL QIYPKLQ
Sbjct: 181 GGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQIYPKLQ 240

Query: 241 ELQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTEWVLSSVTLLTLGS 300
           +LQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTEWVLSSVTLLTLGS
Sbjct: 241 DLQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTEWVLSSVTLLTLGS 300

Query: 301 VITTYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTAAQALQDGNYVGLVAIIISFFL 360
           VITTYIGERITDLKLGNGTSLLIFTSIISYLPASFGRT AQA QDGNYVGLVAI+ISFFL
Sbjct: 301 VITTYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTTAQAFQDGNYVGLVAIMISFFL 360

Query: 361 LVLGIVYVQEAERKIPLNYASRYTSSGGGLQKSAYLPFKVNSSGVMPIIFSTSTLSLPGT 420
           LVLGIVYVQEAERKIPLNYASRYTS GGGLQKSAYLPFKVNSSGVMPIIFSTSTL+LPGT
Sbjct: 361 LVLGIVYVQEAERKIPLNYASRYTSRGGGLQKSAYLPFKVNSSGVMPIIFSTSTLALPGT 420

Query: 421 LARFTGLSVLKNAAFALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASI 480
           LARFTGLSVLK AA ALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASI
Sbjct: 421 LARFTGLSVLKKAALALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASI 480

Query: 481 PLVRPGKSTASFLKAVLSRISVLGSAFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVG 540
           PLVRPGKSTASFLKAVLSRISVLGSAFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVG
Sbjct: 481 PLVRPGKSTASFLKAVLSRISVLGSAFLAILAAGPAVIEQTTHLTAFRGFAGTSVLILVG 540

Query: 541 CATDTARKVQAEIISQKYKNIEFYDIDRYTP 570
           CATDTARKVQAEIISQKYKNIEFYDIDR  P
Sbjct: 541 CATDTARKVQAEIISQKYKNIEFYDIDRSFP 547

[Close]

BLAST of Cp4.1LG04g12930 vs. TAIR 10
Match: AT2G18710.1 (SECY homolog 1 )

HSP 1 Score: 823.2 bits (2125), Expect = 1.3e-238
Identity = 438/573 (76.44%), Postives = 478/573 (83.42%), Query Frame = 0


Query: 2   LISVREAAAASSSPLCFTLSAQYLTNSKRFPRPRLSFTRASFSVPNKPR----ATKSWNL 61
           +I+V E ++ SSS   F   ++    S    R    +  + FSV  K R      KSWNL
Sbjct: 1   MITVSEVSSYSSSSSNFASLSRLNHKSSSRLRSSSLYKGSFFSVSTKTRRNTCKAKSWNL 60

Query: 62  GLTSNREGVSPEELGRTVSRCFLSKIMLLRAESSVFDPLGIRPDLSSELSCGWESFLGFW 121
           GL  N                         +E+SVFDPLGI PD +S LS  WESF+   
Sbjct: 61  GLVINSRS----------------------SEASVFDPLGINPDETSGLSSIWESFVSLL 120

Query: 122 GQTFDSSSSTKRDKGPSARGLAAAIEDSSIDIGDFFKGPLPGKFLQLLGYLALSRLGIYI 181
             +F+SSS  +RDK  S RG+AAAIEDSSID GDFFKGPLPGKFL+LLG+LALSRLGIYI
Sbjct: 121 SPSFESSSGNRRDKPSSGRGVAAAIEDSSIDFGDFFKGPLPGKFLKLLGFLALSRLGIYI 180

Query: 182 PLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINASIVFQLLTQIYPK 241
           PLGGVNREAFVGNLDQNS+LSTLD+FSGGGIGRLGICSLGIVPFINA IVFQLL Q+YPK
Sbjct: 181 PLGGVNREAFVGNLDQNSILSTLDTFSGGGIGRLGICSLGIVPFINAQIVFQLLAQVYPK 240

Query: 242 LQELQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTEWVLSSVTLLTL 301
           LQ+LQK+EGEAGRKKILQYTRYASVGFAIVQAIGQV YLRPYVNDFSTEWV+SSVTLLTL
Sbjct: 241 LQDLQKKEGEAGRKKILQYTRYASVGFAIVQAIGQVFYLRPYVNDFSTEWVVSSVTLLTL 300

Query: 302 GSVITTYIGERITDLKLGNGTSLLIFTSIISYLPASFGRTAAQALQDGNYVGLVAIIISF 361
           GSV+TTYIGERI+DLKLGNGTSLLIFTSIISYLPASFGRT A+ALQ+GNY GL  I++SF
Sbjct: 301 GSVLTTYIGERISDLKLGNGTSLLIFTSIISYLPASFGRTTAEALQEGNYTGLGTIVVSF 360

Query: 362 FLLVLGIVYVQEAERKIPLNYASRYTSSGGGLQKSAYLPFKVNSSGVMPIIFSTSTLSLP 421
            LLVLGIVYVQEAERKIPLNYASRYTS  GGLQKSAYLPFKVNS+GVMPIIFSTS+L+LP
Sbjct: 361 LLLVLGIVYVQEAERKIPLNYASRYTSKAGGLQKSAYLPFKVNSAGVMPIIFSTSSLALP 420

Query: 422 GTLARFTGLSVLKNAAFALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGA 481
            TLARFTG+S LKN AFAL PGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGA
Sbjct: 421 ATLARFTGISALKNVAFALTPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGA 480

Query: 482 SIPLVRPGKSTASFLKAVLSRISVLGSAFLAILAAGPAVIEQTTHLTAFRGFAGTSVLIL 541
           SIPLVRPGKSTA F+K VL RISVLGSAFLA+LAAGPAV+EQ THLTAFRGFAGTSVLIL
Sbjct: 481 SIPLVRPGKSTALFIKTVLGRISVLGSAFLAVLAAGPAVVEQITHLTAFRGFAGTSVLIL 540

Query: 542 VGCATDTARKVQAEIISQKYKNIEFYDIDRYTP 571
           VGCATDTARKVQAEIISQKYKNIEFY++D+Y P
Sbjct: 541 VGCATDTARKVQAEIISQKYKNIEFYELDKYDP 551

[Close]

BLAST of Cp4.1LG04g12930 vs. TAIR 10
Match: AT2G31530.1 (SecY protein transport family protein )

HSP 1 Score: 132.5 bits (332), Expect = 1.1e-30
Identity = 122/427 (28.57%), Postives = 203/427 (47.54%), Query Frame = 0


Query: 152 FFKGPLPGKFLQLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRL 211
           FFK  +  +       L LSR+G +IPL G +R      + Q+ L     SF  G +  L
Sbjct: 147 FFKSEIRRRLFVTAVLLVLSRVGYFIPLPGFDRRL----IPQDYL-----SFVSGSVEEL 206

Query: 212 G---------ICSLGIVPFINASIVFQLLTQIYPKLQELQKREGEAGRKKILQYTRYASV 271
           G         +  LG+ P I ASI+ Q+L  + P L +L+K EG  G +KI  Y  + S 
Sbjct: 207 GEFGAEIKLSLFQLGLSPQIIASIIMQVLCHVLPSLVKLRK-EGLDGHEKIKSYIWWLSF 266

Query: 272 GFAIVQAIGQVLYLRPYVNDFS----TEWVLSSVTLLTLGSVITTYIGERITDLKLGNGT 331
            FAIV+A+  V Y     + F+     + V+ + +LL  G++  T++ + I++   G+G+
Sbjct: 267 FFAIVEAL-VVAYTSLQYSVFAATAQVKHVMMTSSLLVCGAMTMTWLCDTISESGFGHGS 326

Query: 332 SLLIFTSIISYLPASFGRTAAQALQDGNYVG----LVAIIISFFLLVLGIVYVQEAERKI 391
           SL+I   I++    +  +   Q    G++      L+ ++  F ++ +  V V E  RKI
Sbjct: 327 SLIICVGILTGYTETLHKMLNQI--SGSFSNWLPYLLGLLGIFTVVTMFAVVVTEGCRKI 386

Query: 392 PLNY-----ASRYTSSGGGLQKSAYLPFKVNSSGVMPIIFSTSTLSLPGTLARFTGLSVL 451
            L Y     AS         +   Y+PF +N +G+ P++ +T  L+ P  LA   G   L
Sbjct: 387 KLQYYGFKLASASREGSPITEVEPYIPFNINPAGMQPVLTTTYLLAFPSILASILGSPFL 446

Query: 452 KNAAFALNPGGSFYLPTNIL--LIAFFNYYYTFLQLD--PDDVSEQLKRQGASIPLVRPG 511
            N    LNP  +   P  +   + AFF + +    +   P ++++ L + GA IP ++PG
Sbjct: 447 LNMKEILNPESTVGAPPWVYYSIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNIKPG 506

Query: 512 KSTASFLKAVLSRISVLGSAFLAILAAGPAVIEQTTHLTAFRGFA--GTSVLILVGCATD 551
           K+T  +L  + +     G   L+ LA    V++     +  +GF+   TSVLI+VG   +
Sbjct: 507 KATIEYLTKIQASTRFWGGLLLSFLATASTVLDHYLR-SINQGFSIGFTSVLIIVGSIIE 559

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g12930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q38885	1.9e-237	76.44	Preprotein translocase subunit SCY1, chloroplastic OS=Arabidopsis thaliana OX=37...	[more]
P93690	2.5e-226	73.99	Preprotein translocase subunit SECY, chloroplastic OS=Spinacia oleracea OX=3562 ...	[more]
Q6ZG25	4.2e-221	82.99	Preprotein translocase subunit SECY, chloroplastic OS=Oryza sativa subsp. japoni...	[more]
O63066	2.7e-220	83.09	Preprotein translocase subunit SECY, chloroplastic OS=Zea mays OX=4577 GN=SECY P...	[more]
Q9XQU4	6.0e-220	76.55	Preprotein translocase subunit SECY, chloroplastic OS=Pisum sativum OX=3888 GN=S...	[more]

BLAST of Cp4.1LG04g12930 vs. NCBI nr


Match Name	Identity	Description
XP_023529855.1	95.61	preprotein translocase subunit SCY1, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_022928962.1	95.26	preprotein translocase subunit SCY1, chloroplastic [Cucurbita moschata]	[more]
XP_022971656.1	95.09	preprotein translocase subunit SCY1, chloroplastic [Cucurbita maxima]	[more]
KAG7035717.1	95.09	Preprotein translocase subunit SCY1, chloroplastic [Cucurbita argyrosperma subsp...	[more]
KAG6587780.1	94.72	Preprotein translocase subunit SCY1, chloroplastic, partial [Cucurbita argyrospe...	[more]

BLAST of Cp4.1LG04g12930 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1ELF1	95.26	CpSecY OS=Cucurbita moschata OX=3662 GN=LOC111435704 PE=3 SV=1	[more]
A0A6J1I3V7	95.09	CpSecY OS=Cucurbita maxima OX=3661 GN=LOC111470336 PE=3 SV=1	[more]
A0A6J1C141	90.02	CpSecY OS=Momordica charantia OX=3673 GN=LOC111007412 PE=3 SV=1	[more]
A0A5D3BAF5	89.84	CpSecY OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold271G00040 PE=3 SV...	[more]
A0A5A7T100	89.67	CpSecY OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G002190 PE=3 SV...	[more]

BLAST of Cp4.1LG04g12930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G18710.1	1.3e-238	76.44	SECY homolog 1	[more]
AT2G31530.1	1.1e-30	28.57	SecY protein transport family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00303	SECYTRNLCASE	coord: 285..310 score: 32.79 coord: 441..463 score: 35.98 coord: 530..548 score: 47.24 coord: 253..276 score: 39.48 coord: 161..179 score: 40.53 coord: 311..334 score: 46.67 coord: 402..421 score: 47.88 coord: 211..231 score: 57.5 coord: 496..514 score: 42.89
None	No IPR available	PANTHER	PTHR10906:SF9	PREPROTEIN TRANSLOCASE SUBUNIT SCY1, CHLOROPLASTIC	coord: 79..566
IPR002208	SecY/SEC61-alpha family	PFAM	PF00344	SecY	coord: 213..544 e-value: 1.6E-91 score: 306.8
IPR002208	SecY/SEC61-alpha family	TIGRFAM	TIGR00967	TIGR00967	coord: 160..557 e-value: 6.4E-100 score: 332.9
IPR002208	SecY/SEC61-alpha family	PANTHER	PTHR10906	SECY/SEC61-ALPHA FAMILY MEMBER	coord: 79..566
IPR023201	SecY domain superfamily	GENE3D	1.10.3370.10	SecY subunit domain	coord: 152..557 e-value: 4.6E-109 score: 367.0
IPR023201	SecY domain superfamily	SUPERFAMILY	103491	Preprotein translocase SecY subunit	coord: 153..551
IPR030659	SecY conserved site	PROSITE	PS00755	SECY_1	coord: 212..231
IPR030659	SecY conserved site	PROSITE	PS00756	SECY_2	coord: 304..321
IPR026593	Protein translocase subunit SecY	HAMAP	MF_01465	SecY	coord: 149..561 score: 23.136745

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g12930.1	Cp4.1LG04g12930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006616	SRP-dependent cotranslational protein targeting to membrane, translocation
biological_process	GO:0015031	protein transport
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0008320	protein transmembrane transporter activity
molecular_function	GO:0005048	signal sequence binding