Cp4.1LG04g12880 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG04g12880
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	1-deoxy-D-xylulose-5-phosphate synthase
Location	Cp4.1LG04: 10634802 .. 10637958 (-)
RNA-Seq Expression	Cp4.1LG04g12880
Synteny	Cp4.1LG04g12880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTCTCTTCTCACCAATGCTTTCCTTCCTCTGCTCCGATCCTCTCACAATCCGCGTCTCAACTTCAAACAACCCAATTCTGCTTCTAATAAGGTCTATCTATCTCTCTGTTCAGCTCTTTTTCGACCAACTATGTCAGTGTTGGTGACATGATTTTGTGTTTAATTTGATTTACAGTGGAACGGAGTGGTTTGTTGTAGCCATGATGCCACATTTGATGAGGGGCAATCAGTGGACGAAAGAAACAGAGAAGGGGAAAGAGGAGTGAATAAACTGGAGAGGGCTCTCAACTTCACGGGAGACAAGCCAACCACTCCCATTCTCGACACCATCAACTATCCCAATCATATGAAAAATCTCTCCATCCAGGTACAATCGAATAACAACAATTTTTCCGACCAATAACATTCATTTTTAAACCCCAGCGGTCTTTTCTTACAGGAGCTTCAAGAATTGTCGGATGAGGTTCGAGAAGAAATAGTATACACAGTATCGAAAACAGGGGGGCACCTGAGTTCGAGTCTGGGCGTGGCAGAGCTGACGGTGGCACTTCACCATGTATTCAGTGCGCCAGAGGACAAGATAATTTGGGATGTGGGTCATCAGGTGTGTGCGTAAATGAGGGGTTTTTGATTGTAGTTTGAAGCATTGGGGTGAACAAGTATTGACATATGTTGGGGGCAAATTGAAAATTGCAGGCGTATGCTCATAAGATGTTGACGGGTAGAAGGTCCAGAATGCACACAATCCGTAAAACATTTGGCCTGGCCGGGTTTCCGAAGAGGGAGGAAAGTGCTTTTGATGCCTTCGGTGCTGGCCATAGTTCTACCAGCATTTCTGCTGGATTAGGTACTCCTTCCCACCTAACCAACAATACCATTTCAAGTCTAACAACTTCATTGTTGTTCGTCCTGCAGGAATGGCCGTAGCTAGAGACATACTAGGAAAAAACAACCACGTAGTGTCAGTTATAGGCGACGGAGCCATGACTGGGGGAATGGCATACGAGGCACTGAACAACGCCGGTTTCCTAGACTCAAATCTCATCATCATCTTGAACGACAACAGACAAGTTTCTTTGCCCACTGCCACCATCGATGGTCCCGCTCCCGCTGTCGGCGCTCTAAGCAATGCACTCACTAGGCTCCAAGCCAGTAAAAAGTTTCGACAACTGCGTGAAGCAGCGAAGGTACGTACATACTAACCACAGATTTTGCAACCCCAACTTTTTTAGTTTTGTAATTTTGAAATCTAAAATGTGGGATTGGTGCAGGGGCTGACGAAGCAGATGGGGGGACAGGCGCATGAAATTGCAGCGAAATTAGACCACTGCATGAAAGGAATTGTGGGAGGATCGGGGGCGTCGTTATTCGAAGAGCTTGGAATATATTATATAGGTCCAGTGGATGGGCATGATGTGGAAGATCTTGTGTATGTATTGAAGCGAGTGAAGTCTATGCCGGCGCCTGGGCCTGTTCTTATTCATGTCGTCACTGAAAAGGGCAAAGGCTATCCACCTGCGGAGATTGCAGCCGACAAAATGCACGGTAAATACAAGTCGTAAGCATTGAACAATGCAGGCAAATGAAAGGAATTGCTAAATTTTTTGTTTGGTTACAGGAGTAGTGGAATTTGATCCAAGAACAGGGAAACAGATAAAGAAGAAGACGGAAACTCTTTCCTACACGCAATACTTTGCAGATTCATTGATAGCAGAAGCTGAGAGAGACGACAAAATCATAGCCATTCATGCTGCCATGGGAGGTGGCACTGGTCTCAACTATTTCCAGAAACGATTTCCCGATCGTTGCTTCGACGTTGGAATCGCCGAGCAACATGCTGTTACCTTTGCTGCTGGCCTCGCCGCCGAAGGCCTCAAGCCTTTTTGCGCTATTTACTCCTCTTTTCTTCAAAGAGGCTATGATCAGGTAATCTCAAAGGAAGTGCATATAAGATTAATTTGGGCATTTGTAAGTGTTTGGGGAAATGTTGTGCAGGTGGCTCATGATGTAGATCTACAAAAGCTGCCTGTGAGGTTTGCAATAGACAGAGCAGGGCTAGTGGGTGCGGATGGGCCGACCCATTGTGGAGCATTTGACACAACGTTCATGGCATGTTTACCAAATATGGTGGTCATGGCTCCTTCAAACGAGACGGAGCTAATGAACATGGTGGCCACGGCTGCCGCCATCGACGATAGACCCAGCTGCTTCAGGTACCCAAGAGGAAATGGGGTTGGCTCTGTTCTTCCCCTGCACAACAAAGGCACTCCATTGGAGGTATACACACACTTCCATCAAACCCAACTTGTATGCTTCTTTGAATAAGTCTCATTAACGTGGCATGGAAACTGAAAGCCCCGAAATTACATACAGGTGGGGAAGGGGAGGATTTTAAGAGAAGGAAACAGAGTGGCCATTTTGGGATATGGAAGTATAGTACAAAGATGCATGGCGGCGGCGGAGGTGCTTCAACAATACGGCATTGAAATAACAGTGGCGGATGCCCGATTTTGCAAACCTTTAGATGGAGAATTGGTGAAGCAATTGGCAAGACATCACGAGATACTCCTCACGGTTGAAGAAGGATCCATTGGAGGGTTTAGCTCTCACGTTTCCCATTTTCTGGGATTAAATGGATTGCTTGATGGAAATCTGAAGGTATGCATGCAACAAAGAAACACAAAACAAAAGGATGTTTAATTTTACACCATGAAATAAACATGTTGCGTTTGGCTGTGCAGTGGAGGGCAGTGATGCTTCCTGATAGATACATCGACCATGGATCACAGATGGACCAAACCCAAGAAGCAGGGCTGAGTTCGAAGGACATAGCGGCCACTGTTTTATCACTCATAGGGAAAGGCAAAGACAGCTTTCAACTCGTGAACTTATAGATAATATTGTTGAAGAATAATAGTAATCATAATTAAGTAGCGCCTGGTTCATCTCGATTGTTTGTATTTGTAGTTACTTAGTGTATATATATATATATATATAGTTATATAATCATTCCTTCGGCCATAGCGTTACCAAATCACCCACCTACGTTTGCTTTCTTCTCCAGCAAGAGGCATCAAAACTTGAGAGTTCTATTGTGATATGATATTATCGAGCATAAGTTCTCGTAGTATTATTTTTTGTTGACTAAACAT

mRNA sequence

ATGTCTTCTCTTCTCACCAATGCTTTCCTTCCTCTGCTCCGATCCTCTCACAATCCGCGTCTCAACTTCAAACAACCCAATTCTGCTTCTAATAAGTGGAACGGAGTGGTTTGTTGTAGCCATGATGCCACATTTGATGAGGGGCAATCAGTGGACGAAAGAAACAGAGAAGGGGAAAGAGGAGTGAATAAACTGGAGAGGGCTCTCAACTTCACGGGAGACAAGCCAACCACTCCCATTCTCGACACCATCAACTATCCCAATCATATGAAAAATCTCTCCATCCAGGAGCTTCAAGAATTGTCGGATGAGGTTCGAGAAGAAATAGTATACACAGTATCGAAAACAGGGGGGCACCTGAGTTCGAGTCTGGGCGTGGCAGAGCTGACGGTGGCACTTCACCATGTATTCAGTGCGCCAGAGGACAAGATAATTTGGGATGTGGGTCATCAGGCGTATGCTCATAAGATGTTGACGGGTAGAAGGTCCAGAATGCACACAATCCGTAAAACATTTGGCCTGGCCGGGTTTCCGAAGAGGGAGGAAAGTGCTTTTGATGCCTTCGGTGCTGGCCATAGTTCTACCAGCATTTCTGCTGGATTAGGAATGGCCGTAGCTAGAGACATACTAGGAAAAAACAACCACGTAGTGTCAGTTATAGGCGACGGAGCCATGACTGGGGGAATGGCATACGAGGCACTGAACAACGCCGGTTTCCTAGACTCAAATCTCATCATCATCTTGAACGACAACAGACAAGTTTCTTTGCCCACTGCCACCATCGATGGTCCCGCTCCCGCTGTCGGCGCTCTAAGCAATGCACTCACTAGGCTCCAAGCCAGTAAAAAGTTTCGACAACTGCGTGAAGCAGCGAAGGGGCTGACGAAGCAGATGGGGGGACAGGCGCATGAAATTGCAGCGAAATTAGACCACTGCATGAAAGGAATTGTGGGAGGATCGGGGGCGTCGTTATTCGAAGAGCTTGGAATATATTATATAGGTCCAGTGGATGGGCATGATGTGGAAGATCTTGTGTATGTATTGAAGCGAGTGAAGTCTATGCCGGCGCCTGGGCCTGTTCTTATTCATGTCGTCACTGAAAAGGGCAAAGGCTATCCACCTGCGGAGATTGCAGCCGACAAAATGCACGGAGTAGTGGAATTTGATCCAAGAACAGGGAAACAGATAAAGAAGAAGACGGAAACTCTTTCCTACACGCAATACTTTGCAGATTCATTGATAGCAGAAGCTGAGAGAGACGACAAAATCATAGCCATTCATGCTGCCATGGGAGGTGGCACTGGTCTCAACTATTTCCAGAAACGATTTCCCGATCGTTGCTTCGACGTTGGAATCGCCGAGCAACATGCTGTTACCTTTGCTGCTGGCCTCGCCGCCGAAGGCCTCAAGCCTTTTTGCGCTATTTACTCCTCTTTTCTTCAAAGAGGCTATGATCAGGTGGCTCATGATGTAGATCTACAAAAGCTGCCTGTGAGGTTTGCAATAGACAGAGCAGGGCTAGTGGGTGCGGATGGGCCGACCCATTGTGGAGCATTTGACACAACGTTCATGGCATGTTTACCAAATATGGTGGTCATGGCTCCTTCAAACGAGACGGAGCTAATGAACATGGTGGCCACGGCTGCCGCCATCGACGATAGACCCAGCTGCTTCAGGTACCCAAGAGGAAATGGGGTTGGCTCTGTTCTTCCCCTGCACAACAAAGGCACTCCATTGGAGGTGGGGAAGGGGAGGATTTTAAGAGAAGGAAACAGAGTGGCCATTTTGGGATATGGAAGTATAGTACAAAGATGCATGGCGGCGGCGGAGTGGAGGGCAGTGATGCTTCCTGATAGATACATCGACCATGGATCACAGATGGACCAAACCCAAGAAGCAGGGCTGAGTTCGAAGGACATAGCGGCCACTGTTTTATCACTCATAGGGAAAGGCAAAGACAGCTTTCAACTCGTGAACTTATAGATAATATTGTTGAAGAATAATAGTAATCATAATTAAGTAGCGCCTGGTTCATCTCGATTGTTTGTATTTGTAGTTACTTAGTGTATATATATATATATATATAGTTATATAATCATTCCTTCGGCCATAGCGTTACCAAATCACCCACCTACGTTTGCTTTCTTCTCCAGCAAGAGGCATCAAAACTTGAGAGTTCTATTGTGATATGATATTATCGAGCATAAGTTCTCGTAGTATTATTTTTTGTTGACTAAACAT

Coding sequence (CDS)

ATGTCTTCTCTTCTCACCAATGCTTTCCTTCCTCTGCTCCGATCCTCTCACAATCCGCGTCTCAACTTCAAACAACCCAATTCTGCTTCTAATAAGTGGAACGGAGTGGTTTGTTGTAGCCATGATGCCACATTTGATGAGGGGCAATCAGTGGACGAAAGAAACAGAGAAGGGGAAAGAGGAGTGAATAAACTGGAGAGGGCTCTCAACTTCACGGGAGACAAGCCAACCACTCCCATTCTCGACACCATCAACTATCCCAATCATATGAAAAATCTCTCCATCCAGGAGCTTCAAGAATTGTCGGATGAGGTTCGAGAAGAAATAGTATACACAGTATCGAAAACAGGGGGGCACCTGAGTTCGAGTCTGGGCGTGGCAGAGCTGACGGTGGCACTTCACCATGTATTCAGTGCGCCAGAGGACAAGATAATTTGGGATGTGGGTCATCAGGCGTATGCTCATAAGATGTTGACGGGTAGAAGGTCCAGAATGCACACAATCCGTAAAACATTTGGCCTGGCCGGGTTTCCGAAGAGGGAGGAAAGTGCTTTTGATGCCTTCGGTGCTGGCCATAGTTCTACCAGCATTTCTGCTGGATTAGGAATGGCCGTAGCTAGAGACATACTAGGAAAAAACAACCACGTAGTGTCAGTTATAGGCGACGGAGCCATGACTGGGGGAATGGCATACGAGGCACTGAACAACGCCGGTTTCCTAGACTCAAATCTCATCATCATCTTGAACGACAACAGACAAGTTTCTTTGCCCACTGCCACCATCGATGGTCCCGCTCCCGCTGTCGGCGCTCTAAGCAATGCACTCACTAGGCTCCAAGCCAGTAAAAAGTTTCGACAACTGCGTGAAGCAGCGAAGGGGCTGACGAAGCAGATGGGGGGACAGGCGCATGAAATTGCAGCGAAATTAGACCACTGCATGAAAGGAATTGTGGGAGGATCGGGGGCGTCGTTATTCGAAGAGCTTGGAATATATTATATAGGTCCAGTGGATGGGCATGATGTGGAAGATCTTGTGTATGTATTGAAGCGAGTGAAGTCTATGCCGGCGCCTGGGCCTGTTCTTATTCATGTCGTCACTGAAAAGGGCAAAGGCTATCCACCTGCGGAGATTGCAGCCGACAAAATGCACGGAGTAGTGGAATTTGATCCAAGAACAGGGAAACAGATAAAGAAGAAGACGGAAACTCTTTCCTACACGCAATACTTTGCAGATTCATTGATAGCAGAAGCTGAGAGAGACGACAAAATCATAGCCATTCATGCTGCCATGGGAGGTGGCACTGGTCTCAACTATTTCCAGAAACGATTTCCCGATCGTTGCTTCGACGTTGGAATCGCCGAGCAACATGCTGTTACCTTTGCTGCTGGCCTCGCCGCCGAAGGCCTCAAGCCTTTTTGCGCTATTTACTCCTCTTTTCTTCAAAGAGGCTATGATCAGGTGGCTCATGATGTAGATCTACAAAAGCTGCCTGTGAGGTTTGCAATAGACAGAGCAGGGCTAGTGGGTGCGGATGGGCCGACCCATTGTGGAGCATTTGACACAACGTTCATGGCATGTTTACCAAATATGGTGGTCATGGCTCCTTCAAACGAGACGGAGCTAATGAACATGGTGGCCACGGCTGCCGCCATCGACGATAGACCCAGCTGCTTCAGGTACCCAAGAGGAAATGGGGTTGGCTCTGTTCTTCCCCTGCACAACAAAGGCACTCCATTGGAGGTGGGGAAGGGGAGGATTTTAAGAGAAGGAAACAGAGTGGCCATTTTGGGATATGGAAGTATAGTACAAAGATGCATGGCGGCGGCGGAGTGGAGGGCAGTGATGCTTCCTGATAGATACATCGACCATGGATCACAGATGGACCAAACCCAAGAAGCAGGGCTGAGTTCGAAGGACATAGCGGCCACTGTTTTATCACTCATAGGGAAAGGCAAAGACAGCTTTCAACTCGTGAACTTATAG

Protein sequence

MSSLLTNAFLPLLRSSHNPRLNFKQPNSASNKWNGVVCCSHDATFDEGQSVDERNREGERGVNKLERALNFTGDKPTTPILDTINYPNHMKNLSIQELQELSDEVREEIVYTVSKTGGHLSSSLGVAELTVALHHVFSAPEDKIIWDVGHQAYAHKMLTGRRSRMHTIRKTFGLAGFPKREESAFDAFGAGHSSTSISAGLGMAVARDILGKNNHVVSVIGDGAMTGGMAYEALNNAGFLDSNLIIILNDNRQVSLPTATIDGPAPAVGALSNALTRLQASKKFRQLREAAKGLTKQMGGQAHEIAAKLDHCMKGIVGGSGASLFEELGIYYIGPVDGHDVEDLVYVLKRVKSMPAPGPVLIHVVTEKGKGYPPAEIAADKMHGVVEFDPRTGKQIKKKTETLSYTQYFADSLIAEAERDDKIIAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSNETELMNMVATAAAIDDRPSCFRYPRGNGVGSVLPLHNKGTPLEVGKGRILREGNRVAILGYGSIVQRCMAAAEWRAVMLPDRYIDHGSQMDQTQEAGLSSKDIAATVLSLIGKGKDSFQLVNL

Homology

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BLAST of Cp4.1LG04g12880 vs. ExPASy Swiss-Prot
Match: Q6YU51 (Probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0190000 PE=2 SV=1)

HSP 1 Score: 922.5 bits (2383), Expect = 2.6e-267
Identity = 453/654 (69.27%), Postives = 529/654 (80.89%), Query Frame = 0


Query: 69  LNFTGDKPTTPILDTINYPNHMKNLSIQELQELSDEVREEIVYTVSKTGGHLSSSLGVAE 128
           ++++G+KP TP+LDT+NYP HMKNLS  EL++L+ E+R EIV+TVSKTGGHLSSSLGV E
Sbjct: 59  IDYSGEKPATPLLDTVNYPVHMKNLSTPELEQLAAELRAEIVHTVSKTGGHLSSSLGVVE 118

Query: 129 LTVALHHVFSAPEDKIIWDVGHQAYAHKMLTGRRSRMHTIRKTFGLAGFPKREESAFDAF 188
           L VALHHVF  PEDKIIWDVGHQAY HK+LTGRRSRMHTIR+T GLAGFPKR+ESA DAF
Sbjct: 119 LAVALHHVFDTPEDKIIWDVGHQAYPHKILTGRRSRMHTIRQTSGLAGFPKRDESAHDAF 178

Query: 189 GAGHSSTSISAGLGMAVARDILGKNNHVVSVIGDGAMTGGMAYEALNNAGFLDSNLIIIL 248
           GAGHSSTSISA LGMAVARD+LGK NHV+SVIGDGAMT G AYEA+NN+G+LDSN+I++L
Sbjct: 179 GAGHSSTSISAALGMAVARDLLGKKNHVISVIGDGAMTAGQAYEAMNNSGYLDSNMIVVL 238

Query: 249 NDNRQVSLPTATIDGPAPAVGALSNALTRLQASKKFRQLREAAKGLTKQMGGQAHEIAAK 308
           NDN+QVSLPTAT+DGPA  VGALS ALT+LQ+S K R+LREAAK +TKQ+GGQAHE+AAK
Sbjct: 239 NDNKQVSLPTATLDGPATPVGALSKALTKLQSSTKLRRLREAAKTVTKQIGGQAHEVAAK 298

Query: 309 LDHCMKGIVGGSGASLFEELGIYYIGPVDGHDVEDLVYVLKRVKSMPAPGPVLIHVVTEK 368
           +D   +G+V  SG++LFEELG+YYIGPVDGH V+DLV +  +VKSMPAPGPVL+H+VTEK
Sbjct: 299 VDEYARGMVSASGSTLFEELGLYYIGPVDGHSVDDLVAIFNKVKSMPAPGPVLVHIVTEK 358

Query: 369 GKGYPPAEIAADKMHGVVEFDPRTGKQIKKKTETLSYTQYFADSLIAEAERDDKIIAIHA 428
           GKGYPPAE AAD+MHGVV+FDP TG+Q K K  TLSYTQYFA++LI EAE DDK++ IHA
Sbjct: 359 GKGYPPAEAAADRMHGVVKFDPTTGRQFKSKCSTLSYTQYFAEALIREAEADDKVVGIHA 418

Query: 429 AMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVA 488
           AMGGGTGLNYF KRFP+RCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQV 
Sbjct: 419 AMGGGTGLNYFHKRFPERCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVV 478

Query: 489 HDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSNETELMNMVATA 548
           HDVDLQ+LPVRFA+DRAGLVGADGPTHCGAFD  +MACLPNMVVMAP++E ELM+MVATA
Sbjct: 479 HDVDLQRLPVRFAMDRAGLVGADGPTHCGAFDVAYMACLPNMVVMAPADEAELMHMVATA 538

Query: 549 AAIDDRPSCFRYPRGNGVGSVLPLHNKGTPLEVGKGRILREGNRVAILGYGSIVQRCMAA 608
           AAIDDRPSCFR+PRGNG+G+VLP ++KGTPLEVGKGR+L  GNRVA+LGYG++VQ CM A
Sbjct: 539 AAIDDRPSCFRFPRGNGIGAVLPPNHKGTPLEVGKGRVLVGGNRVALLGYGTMVQACMKA 598

Query: 609 AE---------------------------------------------------------- 658
           AE                                                          
Sbjct: 599 AEALKEHGIYVTVADARFCKPLDTGLIRELAAEHEVLVTVEEGSIGGFGSHVAHYLSLSG 658

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BLAST of Cp4.1LG04g12880 vs. ExPASy Swiss-Prot
Match: O22567 (1-deoxy-D-xylulose-5-phosphate synthase 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CLA1 PE=2 SV=2)

HSP 1 Score: 861.7 bits (2225), Expect = 5.5e-249
Identity = 419/658 (63.68%), Postives = 512/658 (77.81%), Query Frame = 0


Query: 68  ALNFTGDKPTTPILDTINYPNHMKNLSIQELQELSDEVREEIVYTVSKTGGHLSSSLGVA 127
           A  +   +P TP+LDT+NYP HMKNLS++ELQ+L+DE+R ++++ VSKTGGHL SSLGV 
Sbjct: 60  AAEYHSQRPPTPLLDTVNYPIHMKNLSLKELQQLADELRSDVIFHVSKTGGHLGSSLGVV 119

Query: 128 ELTVALHHVFSAPEDKIIWDVGHQAYAHKMLTGRRSRMHTIRKTFGLAGFPKREESAFDA 187
           ELTVALH+VF+ P+DKI+WDVGHQ+Y HK+LTGRR +M T+R+T GL+GF KR ES +D+
Sbjct: 120 ELTVALHYVFNTPQDKILWDVGHQSYPHKILTGRRDKMPTMRQTNGLSGFTKRSESEYDS 179

Query: 188 FGAGHSSTSISAGLGMAVARDILGKNNHVVSVIGDGAMTGGMAYEALNNAGFLDSNLIII 247
           FG GHSST+ISA LGMAV RD+ G  N+VV+VIGDGAMT G AYEA+NNAG+LDS++I+I
Sbjct: 180 FGTGHSSTTISAALGMAVGRDLKGGKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVI 239

Query: 248 LNDNRQVSLPTATIDGPAPAVGALSNALTRLQASKKFRQLREAAKGLTKQMGGQAHEIAA 307
           LNDN+QVSLPTAT+DGPAP VGALS+AL++LQ+S+  R+LRE AKG+TKQ+GG  HE+AA
Sbjct: 240 LNDNKQVSLPTATLDGPAPPVGALSSALSKLQSSRPLRELREVAKGVTKQIGGSVHELAA 299

Query: 308 KLDHCMKGIVGGSGASLFEELGIYYIGPVDGHDVEDLVYVLKRVKSMPAPGPVLIHVVTE 367
           K+D   +G++ GSG++LFEELG+YYIGPVDGH+++DL+ +L+ VKS    GPVLIHVVTE
Sbjct: 300 KVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLITILREVKSTKTTGPVLIHVVTE 359

Query: 368 KGKGYPPAEIAADKMHGVVEFDPRTGKQIKKKTETLSYTQYFADSLIAEAERDDKIIAIH 427
           KG+GYP AE AADK HGV +FDP TGKQ K   +TLSYT YFA++LIAEAE+D++++AIH
Sbjct: 360 KGRGYPYAERAADKYHGVAKFDPATGKQFKSPAKTLSYTNYFAEALIAEAEQDNRVVAIH 419

Query: 428 AAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQV 487
           AAMGGGTGLNYF +RFP+RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYSSFLQRGYDQV
Sbjct: 420 AAMGGGTGLNYFLRRFPNRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRGYDQV 479

Query: 488 AHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSNETELMNMVAT 547
            HDVDLQKLPVRFA+DRAGLVGADGPTHCGAFD T+MACLPNMVVMAPS+E EL +MVAT
Sbjct: 480 VHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYMACLPNMVVMAPSDEAELCHMVAT 539

Query: 548 AAAIDDRPSCFRYPRGNGVGSVLPLHNKGTPLEVGKGRILREGNRVAILGYGSIVQRCMA 607
           AAAIDDRPSCFRYPRGNG+G  LP + KG PLEVGKGR+L EG RVA+LGYGS VQ C+A
Sbjct: 540 AAAIDDRPSCFRYPRGNGIGVPLPPNYKGVPLEVGKGRVLLEGERVALLGYGSAVQYCLA 599

Query: 608 AA---------------------------------------------------------- 661
           AA                                                          
Sbjct: 600 AASLVERHGLKVTVADARFCKPLDQTLIRRLASSHEVLLTVEEGSIGGFGSHVAQFMALD 659

[Close]

BLAST of Cp4.1LG04g12880 vs. ExPASy Swiss-Prot
Match: O78328 (Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Capsicum annuum OX=4072 GN=TKT2 PE=2 SV=1)

HSP 1 Score: 855.1 bits (2208), Expect = 5.1e-247
Identity = 422/682 (61.88%), Postives = 513/682 (75.22%), Query Frame = 0


Query: 42  DATFDEGQSVDERNREGERGVNKLERALNFTGDKPTTPILDTINYPNHMKNLSIQELQEL 101
           D  F   Q + +  +        L  +  +   +P TPI+DTINYP HMKNLS++EL++L
Sbjct: 37  DLQFQFHQKLTQVKKRSRTVQASLSESGEYYTQRPPTPIVDTINYPIHMKNLSLKELKQL 96

Query: 102 SDEVREEIVYTVSKTGGHLSSSLGVAELTVALHHVFSAPEDKIIWDVGHQAYAHKMLTGR 161
           +DE+R + ++ VSKTGGHL SSLGV ELTVALH+VF+AP+D+I+WDVGHQ+Y HK+LTGR
Sbjct: 97  ADELRSDTIFNVSKTGGHLGSSLGVVELTVALHYVFNAPQDRILWDVGHQSYPHKILTGR 156

Query: 162 RSRMHTIRKTFGLAGFPKREESAFDAFGAGHSSTSISAGLGMAVARDILGKNNHVVSVIG 221
           R +M T+R+T GLAGF KR ES +D FG GHSST+ISAGLGMAV RD+ G+NN+V++VIG
Sbjct: 157 REKMSTLRQTNGLAGFTKRSESEYDCFGTGHSSTTISAGLGMAVGRDLKGRNNNVIAVIG 216

Query: 222 DGAMTGGMAYEALNNAGFLDSNLIIILNDNRQVSLPTATIDGPAPAVGALSNALTRLQAS 281
           DGAMT G AYEA+NNAG+LDS++I+ILNDNRQVSLPTAT+DGP P VGALS+AL+RLQ++
Sbjct: 217 DGAMTAGQAYEAMNNAGYLDSDMIVILNDNRQVSLPTATLDGPVPPVGALSSALSRLQSN 276

Query: 282 KKFRQLREAAKGLTKQMGGQAHEIAAKLDHCMKGIVGGSGASLFEELGIYYIGPVDGHDV 341
           +  R+LRE AKG+TKQ+GG  HE+AAK+D   +G++ GSG++LFEELG+YYIGPVDGH++
Sbjct: 277 RPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNI 336

Query: 342 EDLVYVLKRVKSMPAPGPVLIHVVTEKGKGYPPAEIAADKMHGVVEFDPRTGKQIKKKTE 401
           +DL+ +LK V+S    GPVLIHVVTEKG+GYP AE AADK HGV +FDP TGKQ K   +
Sbjct: 337 DDLISILKEVRSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPATGKQFKGSAK 396

Query: 402 TLSYTQYFADSLIAEAERDDKIIAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFA 461
           T SYT YFA++LIAEAE D  I+AIHAAMGGGTG+N F +RFP RCFDVGIAEQHAVTFA
Sbjct: 397 TQSYTTYFAEALIAEAEADKDIVAIHAAMGGGTGMNLFLRRFPTRCFDVGIAEQHAVTFA 456

Query: 462 AGLAAEGLKPFCAIYSSFLQRGYDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDT 521
           AGLA EGLKPFCAIYSSF+QR YDQV HDVDLQKLPVRFA+DRAGLVGADGPTHCGAFD 
Sbjct: 457 AGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDV 516

Query: 522 TFMACLPNMVVMAPSNETELMNMVATAAAIDDRPSCFRYPRGNGVGSVLPLHNKGTPLEV 581
           TFMACLPNMVVMAPS+E EL ++VATAAAIDDRPSCFRYPRGNG+G  LP  NKG PLEV
Sbjct: 517 TFMACLPNMVVMAPSDEAELFHIVATAAAIDDRPSCFRYPRGNGIGVELPAGNKGIPLEV 576

Query: 582 GKGRILREGNRVAILGYGSIVQRCMAAA-------------------------------- 641
           GKGRIL EG RVA+LGYGS VQ C+AAA                                
Sbjct: 577 GKGRILVEGERVALLGYGSAVQNCLAAASVLESRGLQVTVADARFCKPLDRALIRSLAKS 636

Query: 642 ---------------------------------EWRAVMLPDRYIDHGSQMDQTQEAGLS 659
                                            +WR ++LPDRYIDHGS  DQ  EAGL+
Sbjct: 637 HEVLVTVEKGSIGGFGSHVVQFMALDGLLDGKLKWRPIVLPDRYIDHGSPADQLAEAGLT 696

[Close]

BLAST of Cp4.1LG04g12880 vs. ExPASy Swiss-Prot
Match: Q38854 (1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DXS PE=1 SV=2)

HSP 1 Score: 850.5 bits (2196), Expect = 1.3e-245
Identity = 415/649 (63.94%), Postives = 500/649 (77.04%), Query Frame = 0


Query: 71  FTGDKPTTPILDTINYPNHMKNLSIQELQELSDEVREEIVYTVSKTGGHLSSSLGVAELT 130
           +  ++P TP+LDTINYP HMKNLS++EL++LSDE+R ++++ VSKTGGHL SSLGV ELT
Sbjct: 67  YYSNRPPTPLLDTINYPIHMKNLSVKELKQLSDELRSDVIFNVSKTGGHLGSSLGVVELT 126

Query: 131 VALHHVFSAPEDKIIWDVGHQAYAHKMLTGRRSRMHTIRKTFGLAGFPKREESAFDAFGA 190
           VALH++F+ P+DKI+WDVGHQ+Y HK+LTGRR +M T+R+T GL+GF KR ES  D FG 
Sbjct: 127 VALHYIFNTPQDKILWDVGHQSYPHKILTGRRGKMPTMRQTNGLSGFTKRGESEHDCFGT 186

Query: 191 GHSSTSISAGLGMAVARDILGKNNHVVSVIGDGAMTGGMAYEALNNAGFLDSNLIIILND 250
           GHSST+ISAGLGMAV RD+ GKNN+VV+VIGDGAMT G AYEA+NNAG+LDS++I+ILND
Sbjct: 187 GHSSTTISAGLGMAVGRDLKGKNNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILND 246

Query: 251 NRQVSLPTATIDGPAPAVGALSNALTRLQASKKFRQLREAAKGLTKQMGGQAHEIAAKLD 310
           N+QVSLPTAT+DGP+P VGALS+AL+RLQ++   R+LRE AKG+TKQ+GG  H++AAK+D
Sbjct: 247 NKQVSLPTATLDGPSPPVGALSSALSRLQSNPALRELREVAKGMTKQIGGPMHQLAAKVD 306

Query: 311 HCMKGIVGGSGASLFEELGIYYIGPVDGHDVEDLVYVLKRVKSMPAPGPVLIHVVTEKGK 370
              +G++ G+G+SLFEELG+YYIGPVDGH+++DLV +LK VKS    GPVLIHVVTEKG+
Sbjct: 307 EYARGMISGTGSSLFEELGLYYIGPVDGHNIDDLVAILKEVKSTRTTGPVLIHVVTEKGR 366

Query: 371 GYPPAEIAADKMHGVVEFDPRTGKQIKKKTETLSYTQYFADSLIAEAERDDKIIAIHAAM 430
           GYP AE A DK HGVV+FDP TG+Q K   +T SYT YFA++L+AEAE D  ++AIHAAM
Sbjct: 367 GYPYAERADDKYHGVVKFDPATGRQFKTTNKTQSYTTYFAEALVAEAEVDKDVVAIHAAM 426

Query: 431 GGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVAHD 490
           GGGTGLN FQ+RFP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYSSF+QR YDQV HD
Sbjct: 427 GGGTGLNLFQRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHD 486

Query: 491 VDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSNETELMNMVATAAA 550
           VDLQKLPVRFA+DRAGLVGADGPTHCGAFD TFMACLPNM+VMAPS+E +L NMVATA A
Sbjct: 487 VDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMIVMAPSDEADLFNMVATAVA 546

Query: 551 IDDRPSCFRYPRGNGVGSVLPLHNKGTPLEVGKGRILREGNRVAILGYGSIVQRCMAAA- 610
           IDDRPSCFRYPRGNG+G  LP  NKG P+E+GKGRIL+EG RVA+LGYGS VQ C+ AA 
Sbjct: 547 IDDRPSCFRYPRGNGIGVALPPGNKGVPIEIGKGRILKEGERVALLGYGSAVQSCLGAAV 606

Query: 611 ------------------------------------------------------------ 655
                                                                       
Sbjct: 607 MLEERGLNVTVADARFCKPLDRALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLL 666

[Close]

BLAST of Cp4.1LG04g12880 vs. ExPASy Swiss-Prot
Match: Q89RW1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110) OX=224911 GN=dxs PE=3 SV=1)

HSP 1 Score: 623.6 bits (1607), Expect = 2.5e-177
Identity = 315/557 (56.55%), Postives = 410/557 (73.61%), Query Frame = 0


Query: 54  RNREGERGVNKLERALNFTGDKPTTPILDTINYPNHMKNLSIQELQELSDEVREEIVYTV 113
           R  E   G +KLE A+N       TP+LDTI  P+ ++ L I+++++++DE+R+E +  V
Sbjct: 5   RAPERPSGADKLEIAVNAYS---KTPLLDTIRTPDDLRKLKIEQVRQVADELRQETIDAV 64

Query: 114 SKTGGHLSSSLGVAELTVALHHVFSAPEDKIIWDVGHQAYAHKMLTGRRSRMHTIRKTFG 173
           S TGGH  + LGV ELT A+H+VF  P D++IWDVGHQAY HK+LTGRR R+ T+R   G
Sbjct: 65  SVTGGHFGAGLGVVELTTAIHYVFDTPRDRLIWDVGHQAYPHKILTGRRDRIRTLRTGGG 124

Query: 174 LAGFPKREESAFDAFGAGHSSTSISAGLGMAVARDILGKNNHVVSVIGDGAMTGGMAYEA 233
           L+GF KR ES +D FGA HSSTSISAGLGMAVARD+ G  N+V++VIGDGAM+ GMAYEA
Sbjct: 125 LSGFTKRSESDYDPFGAAHSSTSISAGLGMAVARDLSGGKNNVIAVIGDGAMSAGMAYEA 184

Query: 234 LNNAGFLDSNLIIILNDNRQVSLPTATIDGPAPAVGALSNALTRLQASKKFRQLREAAKG 293
           +NNAG ++S LI+ILNDN  +S+        AP VGA+S  L+RL + K +R LREAAK 
Sbjct: 185 MNNAGAMNSRLIVILNDN-DMSI--------APPVGAMSAYLSRLYSGKTYRTLREAAKQ 244

Query: 294 LTKQMGGQAHEIAAKLDHCMKGIVGGSGASLFEELGIYYIGPVDGHDVEDLVYVLKRVKS 353
           + K++       A +++   +G +   G +LFEELG YY+GP+DGH+++ L+ VLK V+ 
Sbjct: 245 INKRLPKIIANRANRVEEYSRGFM-MDGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRD 304

Query: 354 MPAPGPVLIHVVTEKGKGYPPAEIAADKMHGVVEFDPRTGKQIKKKTETLSYTQYFADSL 413
           M   GP+L+HVVT+KGKGY PAE +ADK H VV+FD  TG Q K K    +Y   F  SL
Sbjct: 305 M-EEGPILVHVVTQKGKGYGPAEASADKYHAVVKFDVATGTQAKAKPNAPAYQNVFGQSL 364

Query: 414 IAEAERDDKIIAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLAAEGLKPFC 473
           + EA++D+KI+AI AAM  GTG++ F K FPDR FDVGIAEQHAVTFAAGLA+EG KPFC
Sbjct: 365 VKEAQKDEKIVAITAAMPSGTGVDIFNKAFPDRTFDVGIAEQHAVTFAAGLASEGYKPFC 424

Query: 474 AIYSSFLQRGYDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 533
           AIYS+FLQRGYDQ+ HDV +Q LPVRFAIDRAGLVGADG TH G+FD  ++ CLPNMV+M
Sbjct: 425 AIYSTFLQRGYDQIVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIM 484

Query: 534 APSNETELMNMVATAAAIDDRPSCFRYPRGNGVGSVLPLHNKGTPLEVGKGRILREGNRV 593
           A ++E EL++MVAT  AIDDRPS  RYPRG G G  +P    G PLE+GKGR++R+G+++
Sbjct: 485 AAADEAELVHMVATQVAIDDRPSSLRYPRGEGRGIEMP--EVGIPLEIGKGRMIRQGSKI 544

Query: 594 AILGYGSIVQRCMAAAE 611
           A+L +G+ +  C  AA+
Sbjct: 545 ALLSFGTRLAECEKAAD 545

[Close]

BLAST of Cp4.1LG04g12880 vs. NCBI nr
Match: XP_023529489.1 (probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1288 bits (3334), Expect = 0.0
Identity = 660/725 (91.03%), Postives = 660/725 (91.03%), Query Frame = 0


Query: 1   MSSLLTNAFLPLLRSSHNPRLNFKQPNSASNKWNGVVCCSHDATFDEGQSVDERNREGER 60
           MSSLLTNAFLPLLRSSHNPRLNFKQPNSASNKWNGVVCCSHDATFDEGQSVDERNREGER
Sbjct: 1   MSSLLTNAFLPLLRSSHNPRLNFKQPNSASNKWNGVVCCSHDATFDEGQSVDERNREGER 60

Query: 61  GVNKLERALNFTGDKPTTPILDTINYPNHMKNLSIQELQELSDEVREEIVYTVSKTGGHL 120
           GVNKLERALNFTGDKPTTPILDTINYPNHMKNLSIQELQELSDEVREEIVYTVSKTGGHL
Sbjct: 61  GVNKLERALNFTGDKPTTPILDTINYPNHMKNLSIQELQELSDEVREEIVYTVSKTGGHL 120

Query: 121 SSSLGVAELTVALHHVFSAPEDKIIWDVGHQAYAHKMLTGRRSRMHTIRKTFGLAGFPKR 180
           SSSLGVAELTVALHHVFSAPEDKIIWDVGHQAYAHKMLTGRRSRMHTIRKTFGLAGFPKR
Sbjct: 121 SSSLGVAELTVALHHVFSAPEDKIIWDVGHQAYAHKMLTGRRSRMHTIRKTFGLAGFPKR 180

Query: 181 EESAFDAFGAGHSSTSISAGLGMAVARDILGKNNHVVSVIGDGAMTGGMAYEALNNAGFL 240
           EESAFDAFGAGHSSTSISAGLGMAVARDILGKNNHVVSVIGDGAMTGGMAYEALNNAGFL
Sbjct: 181 EESAFDAFGAGHSSTSISAGLGMAVARDILGKNNHVVSVIGDGAMTGGMAYEALNNAGFL 240

Query: 241 DSNLIIILNDNRQVSLPTATIDGPAPAVGALSNALTRLQASKKFRQLREAAKGLTKQMGG 300
           DSNLIIILNDNRQVSLPTATIDGPAPAVGALSNALTRLQASKKFRQLREAAKGLTKQMGG
Sbjct: 241 DSNLIIILNDNRQVSLPTATIDGPAPAVGALSNALTRLQASKKFRQLREAAKGLTKQMGG 300

Query: 301 QAHEIAAKLDHCMKGIVGGSGASLFEELGIYYIGPVDGHDVEDLVYVLKRVKSMPAPGPV 360
           QAHEIAAKLDHCMKGIVGGSGASLFEELGIYYIGPVDGHDVEDLVYVLKRVKSMPAPGPV
Sbjct: 301 QAHEIAAKLDHCMKGIVGGSGASLFEELGIYYIGPVDGHDVEDLVYVLKRVKSMPAPGPV 360

Query: 361 LIHVVTEKGKGYPPAEIAADKMHGVVEFDPRTGKQIKKKTETLSYTQYFADSLIAEAERD 420
           LIHVVTEKGKGYPPAEIAADKMHGVVEFDPRTGKQIKKKTETLSYTQYFADSLIAEAERD
Sbjct: 361 LIHVVTEKGKGYPPAEIAADKMHGVVEFDPRTGKQIKKKTETLSYTQYFADSLIAEAERD 420

Query: 421 DKIIAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFL 480
           DKIIAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFL
Sbjct: 421 DKIIAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFL 480

Query: 481 QRGYDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSNETE 540
           QRGYDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSNETE
Sbjct: 481 QRGYDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSNETE 540

Query: 541 LMNMVATAAAIDDRPSCFRYPRGNGVGSVLPLHNKGTPLEVGKGRILREGNRVAILGYGS 600
           LMNMVATAAAIDDRPSCFRYPRGNGVGSVLPLHNKGTPLEVGKGRILREGNRVAILGYGS
Sbjct: 541 LMNMVATAAAIDDRPSCFRYPRGNGVGSVLPLHNKGTPLEVGKGRILREGNRVAILGYGS 600

Query: 601 IVQRCMAAAE-------------------------------------------------- 660
           IVQRCMAAAE                                                  
Sbjct: 601 IVQRCMAAAEVLQQYGIEITVADARFCKPLDGELVKQLARHHEILLTVEEGSIGGFSSHV 660

[Close]

BLAST of Cp4.1LG04g12880 vs. NCBI nr
Match: XP_022933598.1 (probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic [Cucurbita moschata])

HSP 1 Score: 1278 bits (3306), Expect = 0.0
Identity = 656/725 (90.48%), Postives = 657/725 (90.62%), Query Frame = 0


Query: 1   MSSLLTNAFLPLLRSSHNPRLNFKQPNSASNKWNGVVCCSHDATFDEGQSVDERNREGER 60
           MSSLLTNAFLPLLRSSHNPRLNFKQPNSASNKWNGVVCCS DATFDE QSVD RNREGER
Sbjct: 1   MSSLLTNAFLPLLRSSHNPRLNFKQPNSASNKWNGVVCCSDDATFDERQSVDVRNREGER 60

Query: 61  GVNKLERALNFTGDKPTTPILDTINYPNHMKNLSIQELQELSDEVREEIVYTVSKTGGHL 120
           GVNKLERALNFTGDKPTTPILDTINYPNHMKNLSIQELQELSDEVREEIVYTVSKTGGHL
Sbjct: 61  GVNKLERALNFTGDKPTTPILDTINYPNHMKNLSIQELQELSDEVREEIVYTVSKTGGHL 120

Query: 121 SSSLGVAELTVALHHVFSAPEDKIIWDVGHQAYAHKMLTGRRSRMHTIRKTFGLAGFPKR 180
           SSSLGVAELTVALHHVFSAPEDKIIWDVGHQAYAHKMLTGRRSRMHTIRKTFGLAGFPKR
Sbjct: 121 SSSLGVAELTVALHHVFSAPEDKIIWDVGHQAYAHKMLTGRRSRMHTIRKTFGLAGFPKR 180

Query: 181 EESAFDAFGAGHSSTSISAGLGMAVARDILGKNNHVVSVIGDGAMTGGMAYEALNNAGFL 240
           EESAFDAFGAGHSSTSISAGLGMAVARDILGKNNHVVSVIGDGAMTGGMAYEALNNAGFL
Sbjct: 181 EESAFDAFGAGHSSTSISAGLGMAVARDILGKNNHVVSVIGDGAMTGGMAYEALNNAGFL 240

Query: 241 DSNLIIILNDNRQVSLPTATIDGPAPAVGALSNALTRLQASKKFRQLREAAKGLTKQMGG 300
           DSNLIIILNDNRQVSLPTATIDGPAPAVGALSNALTRLQASKKFRQLREAAKGLTKQMGG
Sbjct: 241 DSNLIIILNDNRQVSLPTATIDGPAPAVGALSNALTRLQASKKFRQLREAAKGLTKQMGG 300

Query: 301 QAHEIAAKLDHCMKGIVGGSGASLFEELGIYYIGPVDGHDVEDLVYVLKRVKSMPAPGPV 360
           QAHEIAAKLDHCMKGIVGGSGASLFEELGIYYIGPVDGHDVEDLVYVLK+VKSMPAPGPV
Sbjct: 301 QAHEIAAKLDHCMKGIVGGSGASLFEELGIYYIGPVDGHDVEDLVYVLKQVKSMPAPGPV 360

Query: 361 LIHVVTEKGKGYPPAEIAADKMHGVVEFDPRTGKQIKKKTETLSYTQYFADSLIAEAERD 420
           LIHVVTEKGKGYPPAEIAADKMHGVVEFDPRTGKQIKKKTETLSYTQYFADSLIAEAERD
Sbjct: 361 LIHVVTEKGKGYPPAEIAADKMHGVVEFDPRTGKQIKKKTETLSYTQYFADSLIAEAERD 420

Query: 421 DKIIAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFL 480
           DKIIAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFL
Sbjct: 421 DKIIAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFL 480

Query: 481 QRGYDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSNETE 540
           QRGYDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSNETE
Sbjct: 481 QRGYDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSNETE 540

Query: 541 LMNMVATAAAIDDRPSCFRYPRGNGVGSVLPLHNKGTPLEVGKGRILREGNRVAILGYGS 600
           LMNMVATAAAIDDRPSCFRYPRGNGVGSVLPLHNKGTPLEVGKGRILREGNRVAILGYGS
Sbjct: 541 LMNMVATAAAIDDRPSCFRYPRGNGVGSVLPLHNKGTPLEVGKGRILREGNRVAILGYGS 600

Query: 601 IVQRCMAAAE-------------------------------------------------- 660
           IVQRCMAAAE                                                  
Sbjct: 601 IVQRCMAAAEVLQQYGIEITVADARFCKPLDGELVKQLARHHEILLTVEEGSIGGFSSHV 660

[Close]

BLAST of Cp4.1LG04g12880 vs. NCBI nr
Match: XP_022973482.1 (probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic [Cucurbita maxima])

HSP 1 Score: 1266 bits (3275), Expect = 0.0
Identity = 649/725 (89.52%), Postives = 654/725 (90.21%), Query Frame = 0


Query: 1   MSSLLTNAFLPLLRSSHNPRLNFKQPNSASNKWNGVVCCSHDATFDEGQSVDERNREGER 60
           MSSLLTNAFLPLLRSSHNPRLNFKQPNSASNKWNGVVCCS DATFDE QSVD RNREGER
Sbjct: 1   MSSLLTNAFLPLLRSSHNPRLNFKQPNSASNKWNGVVCCSDDATFDERQSVDVRNREGER 60

Query: 61  GVNKLERALNFTGDKPTTPILDTINYPNHMKNLSIQELQELSDEVREEIVYTVSKTGGHL 120
           GVNKLERALNFTGDKPTTPILDTINYPNHMKNLSIQELQELSDEVREEIVYTVSKTGGHL
Sbjct: 61  GVNKLERALNFTGDKPTTPILDTINYPNHMKNLSIQELQELSDEVREEIVYTVSKTGGHL 120

Query: 121 SSSLGVAELTVALHHVFSAPEDKIIWDVGHQAYAHKMLTGRRSRMHTIRKTFGLAGFPKR 180
           SSSLGVAELTVALHHVFSAPEDKIIWDVGHQAYAHKMLTGRRSRMHTIRKTFGLAGFP+R
Sbjct: 121 SSSLGVAELTVALHHVFSAPEDKIIWDVGHQAYAHKMLTGRRSRMHTIRKTFGLAGFPRR 180

Query: 181 EESAFDAFGAGHSSTSISAGLGMAVARDILGKNNHVVSVIGDGAMTGGMAYEALNNAGFL 240
           EES FDAFGAGHSSTSISAGLGMAVARDILGKNNHVVSVIGDGAMTGGMAYEALNNAGFL
Sbjct: 181 EESGFDAFGAGHSSTSISAGLGMAVARDILGKNNHVVSVIGDGAMTGGMAYEALNNAGFL 240

Query: 241 DSNLIIILNDNRQVSLPTATIDGPAPAVGALSNALTRLQASKKFRQLREAAKGLTKQMGG 300
           DSNLIIILNDNRQVSLPTATIDGPAPAVGALSNALTRLQASKKFRQLREAAKGLTKQMG 
Sbjct: 241 DSNLIIILNDNRQVSLPTATIDGPAPAVGALSNALTRLQASKKFRQLREAAKGLTKQMGE 300

Query: 301 QAHEIAAKLDHCMKGIVGGSGASLFEELGIYYIGPVDGHDVEDLVYVLKRVKSMPAPGPV 360
           QAHEIA +LDHCMKGIVGGSGASLFEELGIYYIGPVDGHDVEDLVYVLK+VKSMPAPGPV
Sbjct: 301 QAHEIATRLDHCMKGIVGGSGASLFEELGIYYIGPVDGHDVEDLVYVLKQVKSMPAPGPV 360

Query: 361 LIHVVTEKGKGYPPAEIAADKMHGVVEFDPRTGKQIKKKTETLSYTQYFADSLIAEAERD 420
           LIHVVTEKGKGYPPAEIAADKMHGVVEFDPRTGKQIKKKTETLSYTQYFADSLIAEAERD
Sbjct: 361 LIHVVTEKGKGYPPAEIAADKMHGVVEFDPRTGKQIKKKTETLSYTQYFADSLIAEAERD 420

Query: 421 DKIIAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFL 480
           DKIIAIHAAMGGGTGLNYFQKRFP+RCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFL
Sbjct: 421 DKIIAIHAAMGGGTGLNYFQKRFPNRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFL 480

Query: 481 QRGYDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSNETE 540
           QRGYDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSNETE
Sbjct: 481 QRGYDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSNETE 540

Query: 541 LMNMVATAAAIDDRPSCFRYPRGNGVGSVLPLHNKGTPLEVGKGRILREGNRVAILGYGS 600
           LMNMVATAAAIDDRPSCFRYPRGNGVGSVLPLHNKGTPLEVGKGRILREGNRVAILGYGS
Sbjct: 541 LMNMVATAAAIDDRPSCFRYPRGNGVGSVLPLHNKGTPLEVGKGRILREGNRVAILGYGS 600

Query: 601 IVQRCMAAA--------------------------------------------------- 660
           IVQRCMAAA                                                   
Sbjct: 601 IVQRCMAAAMVLQQYGIQITVADARFCKPLDGELVKQLARHHEILLTVEEGSIGGFSSHV 660

[Close]

BLAST of Cp4.1LG04g12880 vs. NCBI nr
Match: KAG7035723.1 (putative 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1204 bits (3116), Expect = 0.0
Identity = 620/694 (89.34%), Postives = 623/694 (89.77%), Query Frame = 0


Query: 33  WNGVVCCSHDATFDEGQSVDERNREGERGVN-KLERALNFTGDKPTTPILDTINYPNHMK 92
           WNGVVCCS DATFDE QSVD RNREGERGVN KLERALNFTGDKPTTPILDTINYPNHMK
Sbjct: 1   WNGVVCCSDDATFDERQSVDVRNREGERGVNNKLERALNFTGDKPTTPILDTINYPNHMK 60

Query: 93  NLSIQELQELSDEVREEIVYTVSKTGGHLSSSLGVAELTVALHHVFSAPEDKIIWDVGHQ 152
           NLSIQELQELSDEVREEIVYTVSKTGGHLSSSLGVAELTVALHHVFSAPEDKIIWDVGHQ
Sbjct: 61  NLSIQELQELSDEVREEIVYTVSKTGGHLSSSLGVAELTVALHHVFSAPEDKIIWDVGHQ 120

Query: 153 AYAHKMLTGRRSRMHTIRKTFGLAGFPKREESAFDAFGAGHSSTSISAGLGMAVARDILG 212
           AYAHKMLTGRRSRMHTIRKTFGLAGFPKREESAFDAFGAGHSSTSISAGLGMAVARDILG
Sbjct: 121 AYAHKMLTGRRSRMHTIRKTFGLAGFPKREESAFDAFGAGHSSTSISAGLGMAVARDILG 180

Query: 213 KNNHVVSVIGDGAMTGGMAYEALNNAGFLDSNLIIILNDNRQVSLPTATIDGPAPAVGAL 272
           KNNHVVSVIGDGAMTGGMAYEALNNAGFLDSNLIIILNDNRQVSLPTATIDGPAPAVGAL
Sbjct: 181 KNNHVVSVIGDGAMTGGMAYEALNNAGFLDSNLIIILNDNRQVSLPTATIDGPAPAVGAL 240

Query: 273 SNALTRLQASKKFRQLREAAKGLTKQMGGQAHEIAAKLDHCMKGIVGGSGASLFEELGIY 332
           SNALTRLQASKKFRQLREAAKGLTKQMGGQAHEIAAKLDHCMKGIVGGSGASLFEELGIY
Sbjct: 241 SNALTRLQASKKFRQLREAAKGLTKQMGGQAHEIAAKLDHCMKGIVGGSGASLFEELGIY 300

Query: 333 YIGPVDGHDVEDLVYVLKRVKSMPAPGPVLIHVVTEKGKGYPPAEIAADKMHGVVEFDPR 392
           YIGPVDGHDVEDLVYVL +VKSMPA GPVLIHVVTEKGKGYPPAEIAADKMHGVVEFDPR
Sbjct: 301 YIGPVDGHDVEDLVYVLTQVKSMPAAGPVLIHVVTEKGKGYPPAEIAADKMHGVVEFDPR 360

Query: 393 TGKQIKKKTETLSYTQYFADSLIAEAERDDKIIAIHAAMGGGTGLNYFQKRFPDRCFDVG 452
           TGKQIKKKTETLSYTQYFADSLIAEA+RDDKIIAIHAAMGGGTGLNYFQKRFPDRCFDVG
Sbjct: 361 TGKQIKKKTETLSYTQYFADSLIAEADRDDKIIAIHAAMGGGTGLNYFQKRFPDRCFDVG 420

Query: 453 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVAHDVDLQKLPVRFAIDRAGLVGAD 512
           IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVAHDVDLQKLPVRFAIDRAGLVGAD
Sbjct: 421 IAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVAHDVDLQKLPVRFAIDRAGLVGAD 480

Query: 513 GPTHCGAFDTTFMACLPNMVVMAPSNETELMNMVATAAAIDDRPSCFRYPRGNGVGSVLP 572
           GPTHCGAFDTTFMACLPNMVVMAPSNETELMNMVATAAAIDDRPSCFRYPRGNGVGSVLP
Sbjct: 481 GPTHCGAFDTTFMACLPNMVVMAPSNETELMNMVATAAAIDDRPSCFRYPRGNGVGSVLP 540

Query: 573 LHNKGTPLEVGKGRILREGNRVAILGYGSIVQRCMAAAE--------------------- 632
           LHNKGTPLEVGKGRILREGNRVAILGYGSIVQRCMAAAE                     
Sbjct: 541 LHNKGTPLEVGKGRILREGNRVAILGYGSIVQRCMAAAEVLQQYGIEITVADARFCKPLD 600

Query: 633 --------------------------------------------WRAVMLPDRYIDHGSQ 660
                                                       WRAVMLPDRYIDHGSQ
Sbjct: 601 GELVKQLARHHEILLTVEEGSIGGFSSHVSHFLGLNGLLDGNLKWRAVMLPDRYIDHGSQ 660

[Close]

BLAST of Cp4.1LG04g12880 vs. NCBI nr
Match: KAG6587773.1 (putative 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1142 bits (2953), Expect = 0.0
Identity = 605/726 (83.33%), Postives = 610/726 (84.02%), Query Frame = 0


Query: 1   MSSLLTNAFLPLLRSSHNPRLNFKQPNSASNKWNGVVCCSHDATFDEGQSVDERNREGER 60
           MSSLLTNAFLPLLRSSHNPRLNFKQPNSASNKWNGVVCCS DATFDE QSVD RNREGER
Sbjct: 1   MSSLLTNAFLPLLRSSHNPRLNFKQPNSASNKWNGVVCCSDDATFDERQSVDVRNREGER 60

Query: 61  GVN-KLERALNFTGDKPTTPILDTINYPNHMKNLSIQELQELSDEVREEIVYTVSKTGGH 120
           GVN KLERALNFTGDKPTTPILDTINYPNHMKNLSIQELQELSDEVREEIVYTVSKTGGH
Sbjct: 61  GVNNKLERALNFTGDKPTTPILDTINYPNHMKNLSIQELQELSDEVREEIVYTVSKTGGH 120

Query: 121 LSSSLGVAELTVALHHVFSAPEDKIIWDVGHQAYAHKMLTGRRSRMHTIRKTFGLAGFPK 180
           LSSSLGVAELTVALHHVFSAPEDKIIWDVGHQAYAHKMLTGRRSRMHTIRKTFGLAGFPK
Sbjct: 121 LSSSLGVAELTVALHHVFSAPEDKIIWDVGHQAYAHKMLTGRRSRMHTIRKTFGLAGFPK 180

Query: 181 REESAFDAFGAGHSSTSISAGLGMAVARDILGKNNHVVSVIGDGAMTGGMAYEALNNAGF 240
           REESAFDAFGAGHSSTSISAGLGMAVARDILGKNNHVVSVIGDGAMTGGMAYEALNNAGF
Sbjct: 181 REESAFDAFGAGHSSTSISAGLGMAVARDILGKNNHVVSVIGDGAMTGGMAYEALNNAGF 240

Query: 241 LDSNLIIILNDNRQVSLPTATIDGPAPAVGALSNALTRLQASKKFRQLREAAKGLTKQMG 300
           LDSNLIIILNDNRQVSLPTATIDGPAPAVGALSNALTRLQASKKFRQLREAAKGLTKQ+G
Sbjct: 241 LDSNLIIILNDNRQVSLPTATIDGPAPAVGALSNALTRLQASKKFRQLREAAKGLTKQIG 300

Query: 301 GQAHEIAAKLDHCMKGIVGGSGASLFEELGIYYIGPVDGHDVEDLVYVLKRVKSMPAPGP 360
           GQAHEIAAKLDHCMKGIVGGSGASLFEELGIYYIGPVDGHDVEDLVYVLK+VKSMPAPGP
Sbjct: 301 GQAHEIAAKLDHCMKGIVGGSGASLFEELGIYYIGPVDGHDVEDLVYVLKQVKSMPAPGP 360

Query: 361 VLIHVVTEKGKGYPPAEIAADKMHGVVEFDPRTGKQIKKKTETLSYTQYFADSLIAEAER 420
           VLIHVVTEKGKGYPPAEIAADKMHGVVEFDPRTGKQIKKKTETLSYTQYFADSLIAEAER
Sbjct: 361 VLIHVVTEKGKGYPPAEIAADKMHGVVEFDPRTGKQIKKKTETLSYTQYFADSLIAEAER 420

Query: 421 DDKIIAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSF 480
           DDKIIAIHAA          +  FP                              I +S 
Sbjct: 421 DDKIIAIHAAWEVALVSTISRNDFP------------------------------IVAS- 480

Query: 481 LQRGYDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSNET 540
              GYDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSNET
Sbjct: 481 --TGYDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSNET 540

Query: 541 ELMNMVATAAAIDDRPSCFRYPRGNGVGSVLPLHNKGTPLEVGKGRILREGNRVAILGYG 600
           ELMNMVATAAAIDDRPSCFRYPRGNGVGSVLPLHNKGTPLEVGKGRILREGNRVAILGYG
Sbjct: 541 ELMNMVATAAAIDDRPSCFRYPRGNGVGSVLPLHNKGTPLEVGKGRILREGNRVAILGYG 600

Query: 601 SIVQRCMAAAE------------------------------------------------- 660
           SIVQRCMAAAE                                                 
Sbjct: 601 SIVQRCMAAAEVLQQYGIEITVADARFCKPLDGELVKQLARHHEILLTVEEGSIGGFSSH 660

[Close]

BLAST of Cp4.1LG04g12880 vs. ExPASy TrEMBL
Match: A0A6J1F592 (1-deoxy-D-xylulose-5-phosphate synthase OS=Cucurbita moschata OX=3662 GN=LOC111440977 PE=3 SV=1)

HSP 1 Score: 1278 bits (3306), Expect = 0.0
Identity = 656/725 (90.48%), Postives = 657/725 (90.62%), Query Frame = 0


Query: 1   MSSLLTNAFLPLLRSSHNPRLNFKQPNSASNKWNGVVCCSHDATFDEGQSVDERNREGER 60
           MSSLLTNAFLPLLRSSHNPRLNFKQPNSASNKWNGVVCCS DATFDE QSVD RNREGER
Sbjct: 1   MSSLLTNAFLPLLRSSHNPRLNFKQPNSASNKWNGVVCCSDDATFDERQSVDVRNREGER 60

Query: 61  GVNKLERALNFTGDKPTTPILDTINYPNHMKNLSIQELQELSDEVREEIVYTVSKTGGHL 120
           GVNKLERALNFTGDKPTTPILDTINYPNHMKNLSIQELQELSDEVREEIVYTVSKTGGHL
Sbjct: 61  GVNKLERALNFTGDKPTTPILDTINYPNHMKNLSIQELQELSDEVREEIVYTVSKTGGHL 120

Query: 121 SSSLGVAELTVALHHVFSAPEDKIIWDVGHQAYAHKMLTGRRSRMHTIRKTFGLAGFPKR 180
           SSSLGVAELTVALHHVFSAPEDKIIWDVGHQAYAHKMLTGRRSRMHTIRKTFGLAGFPKR
Sbjct: 121 SSSLGVAELTVALHHVFSAPEDKIIWDVGHQAYAHKMLTGRRSRMHTIRKTFGLAGFPKR 180

Query: 181 EESAFDAFGAGHSSTSISAGLGMAVARDILGKNNHVVSVIGDGAMTGGMAYEALNNAGFL 240
           EESAFDAFGAGHSSTSISAGLGMAVARDILGKNNHVVSVIGDGAMTGGMAYEALNNAGFL
Sbjct: 181 EESAFDAFGAGHSSTSISAGLGMAVARDILGKNNHVVSVIGDGAMTGGMAYEALNNAGFL 240

Query: 241 DSNLIIILNDNRQVSLPTATIDGPAPAVGALSNALTRLQASKKFRQLREAAKGLTKQMGG 300
           DSNLIIILNDNRQVSLPTATIDGPAPAVGALSNALTRLQASKKFRQLREAAKGLTKQMGG
Sbjct: 241 DSNLIIILNDNRQVSLPTATIDGPAPAVGALSNALTRLQASKKFRQLREAAKGLTKQMGG 300

Query: 301 QAHEIAAKLDHCMKGIVGGSGASLFEELGIYYIGPVDGHDVEDLVYVLKRVKSMPAPGPV 360
           QAHEIAAKLDHCMKGIVGGSGASLFEELGIYYIGPVDGHDVEDLVYVLK+VKSMPAPGPV
Sbjct: 301 QAHEIAAKLDHCMKGIVGGSGASLFEELGIYYIGPVDGHDVEDLVYVLKQVKSMPAPGPV 360

Query: 361 LIHVVTEKGKGYPPAEIAADKMHGVVEFDPRTGKQIKKKTETLSYTQYFADSLIAEAERD 420
           LIHVVTEKGKGYPPAEIAADKMHGVVEFDPRTGKQIKKKTETLSYTQYFADSLIAEAERD
Sbjct: 361 LIHVVTEKGKGYPPAEIAADKMHGVVEFDPRTGKQIKKKTETLSYTQYFADSLIAEAERD 420

Query: 421 DKIIAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFL 480
           DKIIAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFL
Sbjct: 421 DKIIAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFL 480

Query: 481 QRGYDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSNETE 540
           QRGYDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSNETE
Sbjct: 481 QRGYDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSNETE 540

Query: 541 LMNMVATAAAIDDRPSCFRYPRGNGVGSVLPLHNKGTPLEVGKGRILREGNRVAILGYGS 600
           LMNMVATAAAIDDRPSCFRYPRGNGVGSVLPLHNKGTPLEVGKGRILREGNRVAILGYGS
Sbjct: 541 LMNMVATAAAIDDRPSCFRYPRGNGVGSVLPLHNKGTPLEVGKGRILREGNRVAILGYGS 600

Query: 601 IVQRCMAAAE-------------------------------------------------- 660
           IVQRCMAAAE                                                  
Sbjct: 601 IVQRCMAAAEVLQQYGIEITVADARFCKPLDGELVKQLARHHEILLTVEEGSIGGFSSHV 660

[Close]

BLAST of Cp4.1LG04g12880 vs. ExPASy TrEMBL
Match: A0A6J1I7N0 (1-deoxy-D-xylulose-5-phosphate synthase OS=Cucurbita maxima OX=3661 GN=LOC111472028 PE=3 SV=1)

HSP 1 Score: 1266 bits (3275), Expect = 0.0
Identity = 649/725 (89.52%), Postives = 654/725 (90.21%), Query Frame = 0


Query: 1   MSSLLTNAFLPLLRSSHNPRLNFKQPNSASNKWNGVVCCSHDATFDEGQSVDERNREGER 60
           MSSLLTNAFLPLLRSSHNPRLNFKQPNSASNKWNGVVCCS DATFDE QSVD RNREGER
Sbjct: 1   MSSLLTNAFLPLLRSSHNPRLNFKQPNSASNKWNGVVCCSDDATFDERQSVDVRNREGER 60

Query: 61  GVNKLERALNFTGDKPTTPILDTINYPNHMKNLSIQELQELSDEVREEIVYTVSKTGGHL 120
           GVNKLERALNFTGDKPTTPILDTINYPNHMKNLSIQELQELSDEVREEIVYTVSKTGGHL
Sbjct: 61  GVNKLERALNFTGDKPTTPILDTINYPNHMKNLSIQELQELSDEVREEIVYTVSKTGGHL 120

Query: 121 SSSLGVAELTVALHHVFSAPEDKIIWDVGHQAYAHKMLTGRRSRMHTIRKTFGLAGFPKR 180
           SSSLGVAELTVALHHVFSAPEDKIIWDVGHQAYAHKMLTGRRSRMHTIRKTFGLAGFP+R
Sbjct: 121 SSSLGVAELTVALHHVFSAPEDKIIWDVGHQAYAHKMLTGRRSRMHTIRKTFGLAGFPRR 180

Query: 181 EESAFDAFGAGHSSTSISAGLGMAVARDILGKNNHVVSVIGDGAMTGGMAYEALNNAGFL 240
           EES FDAFGAGHSSTSISAGLGMAVARDILGKNNHVVSVIGDGAMTGGMAYEALNNAGFL
Sbjct: 181 EESGFDAFGAGHSSTSISAGLGMAVARDILGKNNHVVSVIGDGAMTGGMAYEALNNAGFL 240

Query: 241 DSNLIIILNDNRQVSLPTATIDGPAPAVGALSNALTRLQASKKFRQLREAAKGLTKQMGG 300
           DSNLIIILNDNRQVSLPTATIDGPAPAVGALSNALTRLQASKKFRQLREAAKGLTKQMG 
Sbjct: 241 DSNLIIILNDNRQVSLPTATIDGPAPAVGALSNALTRLQASKKFRQLREAAKGLTKQMGE 300

Query: 301 QAHEIAAKLDHCMKGIVGGSGASLFEELGIYYIGPVDGHDVEDLVYVLKRVKSMPAPGPV 360
           QAHEIA +LDHCMKGIVGGSGASLFEELGIYYIGPVDGHDVEDLVYVLK+VKSMPAPGPV
Sbjct: 301 QAHEIATRLDHCMKGIVGGSGASLFEELGIYYIGPVDGHDVEDLVYVLKQVKSMPAPGPV 360

Query: 361 LIHVVTEKGKGYPPAEIAADKMHGVVEFDPRTGKQIKKKTETLSYTQYFADSLIAEAERD 420
           LIHVVTEKGKGYPPAEIAADKMHGVVEFDPRTGKQIKKKTETLSYTQYFADSLIAEAERD
Sbjct: 361 LIHVVTEKGKGYPPAEIAADKMHGVVEFDPRTGKQIKKKTETLSYTQYFADSLIAEAERD 420

Query: 421 DKIIAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFL 480
           DKIIAIHAAMGGGTGLNYFQKRFP+RCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFL
Sbjct: 421 DKIIAIHAAMGGGTGLNYFQKRFPNRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFL 480

Query: 481 QRGYDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSNETE 540
           QRGYDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSNETE
Sbjct: 481 QRGYDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSNETE 540

Query: 541 LMNMVATAAAIDDRPSCFRYPRGNGVGSVLPLHNKGTPLEVGKGRILREGNRVAILGYGS 600
           LMNMVATAAAIDDRPSCFRYPRGNGVGSVLPLHNKGTPLEVGKGRILREGNRVAILGYGS
Sbjct: 541 LMNMVATAAAIDDRPSCFRYPRGNGVGSVLPLHNKGTPLEVGKGRILREGNRVAILGYGS 600

Query: 601 IVQRCMAAA--------------------------------------------------- 660
           IVQRCMAAA                                                   
Sbjct: 601 IVQRCMAAAMVLQQYGIQITVADARFCKPLDGELVKQLARHHEILLTVEEGSIGGFSSHV 660

[Close]

BLAST of Cp4.1LG04g12880 vs. ExPASy TrEMBL
Match: A0A6J1BYW4 (1-deoxy-D-xylulose-5-phosphate synthase OS=Momordica charantia OX=3673 GN=LOC111006873 PE=3 SV=1)

HSP 1 Score: 1089 bits (2816), Expect = 0.0
Identity = 570/736 (77.45%), Postives = 619/736 (84.10%), Query Frame = 0


Query: 1   MSSLLTNAFLPLLRS--SHNPRLNFKQPNSASNKWNGVV-CCS--HDATFDEGQSVD--- 60
           MSSLLTN+ LPLLR+  SH+ RL FK  + + N   GVV CC    +  F+E Q +    
Sbjct: 1   MSSLLTNSLLPLLRAGASHDWRLTFKPKHKSLN---GVVFCCGGGDNGAFEERQRLAAAV 60

Query: 61  ERNREGERGVNKLERA-LNFTGDKPTTPILDTINYPNHMKNLSIQELQELSDEVREEIVY 120
           +++ +   GV KLE+  L+FTGDKP+TPILDTINYPNHMKNLSIQEL+ L+DE+R+E+VY
Sbjct: 61  KKSDDSNGGVVKLEKPPLSFTGDKPSTPILDTINYPNHMKNLSIQELELLTDEIRQEVVY 120

Query: 121 TVSKTGGHLSSSLGVAELTVALHHVFSAPEDKIIWDVGHQAYAHKMLTGRRSRMHTIRKT 180
           TVSK GGHLSSSLGVAELTVALHHVFSAPEDKIIWDVGHQAY HKMLTGRRS+MHTIR+T
Sbjct: 121 TVSKIGGHLSSSLGVAELTVALHHVFSAPEDKIIWDVGHQAYVHKMLTGRRSKMHTIRQT 180

Query: 181 FGLAGFPKREESAFDAFGAGHSSTSISAGLGMAVARDILGKNNHVVSVIGDGAMTGGMAY 240
           FGLAGFPKREESA+DAFGAGHSSTSISAGLGMAVARD+LGK+NHVV+VIGDGAMTGGMAY
Sbjct: 181 FGLAGFPKREESAYDAFGAGHSSTSISAGLGMAVARDMLGKDNHVVAVIGDGAMTGGMAY 240

Query: 241 EALNNAGFLDSNLIIILNDNRQVSLPTATIDGPAPAVGALSNALTRLQASKKFRQLREAA 300
           EALNNAG+LDSNLIIILNDNRQVSLPTATIDGPAP VGALS ALTRLQASK+ RQLREAA
Sbjct: 241 EALNNAGYLDSNLIIILNDNRQVSLPTATIDGPAPPVGALSKALTRLQASKRLRQLREAA 300

Query: 301 KGLTKQMGGQAHEIAAKLDHCMKGIVGG--SGASLFEELGIYYIGPVDGHDVEDLVYVLK 360
           KGLT Q+GGQAHEIAAK+DHC++G+V G  SGASLFEELGIYYIGPVDGH+VEDLVY+LK
Sbjct: 301 KGLTMQIGGQAHEIAAKVDHCVRGMVAGTGSGASLFEELGIYYIGPVDGHNVEDLVYILK 360

Query: 361 RVKSMPAPGPVLIHVVTEKGKGYPPAEIAADKMHGVVEFDPRTGKQIKKKTETLSYTQYF 420
           +VK+MP PGPVLIHVVTEKGKGYPPAEIAADKMHGVV+FDP +GKQ+K KTETLSYTQYF
Sbjct: 361 QVKAMPTPGPVLIHVVTEKGKGYPPAEIAADKMHGVVKFDPMSGKQVKTKTETLSYTQYF 420

Query: 421 ADSLIAEAERDDKIIAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLAAEGL 480
           ADSLIAEAERD+KIIAIHAAMGGGTGLNYFQKRFP+RCFDVGIAEQHAVTFAAGLAAEGL
Sbjct: 421 ADSLIAEAERDEKIIAIHAAMGGGTGLNYFQKRFPERCFDVGIAEQHAVTFAAGLAAEGL 480

Query: 481 KPFCAIYSSFLQRGYDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPN 540
           KPFCAIYSSFLQRGYDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPN
Sbjct: 481 KPFCAIYSSFLQRGYDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPN 540

Query: 541 MVVMAPSNETELMNMVATAAAIDDRPSCFRYPRGNGVGSVLPLHNKGTPLEVGKGRILRE 600
           MVVMAPS+ETELM+MVATAAAIDDRPSCFRYPRGNGVGSVLP HNKGTPLEVGKGRILRE
Sbjct: 541 MVVMAPSDETELMHMVATAAAIDDRPSCFRYPRGNGVGSVLPPHNKGTPLEVGKGRILRE 600

Query: 601 GNRVAILGYGSIVQRCMAAAE--------------------------------------- 660
           GNRVAILGYG+IVQ C+AAAE                                       
Sbjct: 601 GNRVAILGYGTIVQSCIAAAEVLQQYGINITVADARFCKPLDGELVKQLAREHEVLLTIE 660

[Close]

BLAST of Cp4.1LG04g12880 vs. ExPASy TrEMBL
Match: A0A1S3BXJ4 (1-deoxy-D-xylulose-5-phosphate synthase OS=Cucumis melo OX=3656 GN=LOC103494295 PE=3 SV=1)

HSP 1 Score: 1077 bits (2784), Expect = 0.0
Identity = 559/728 (76.79%), Postives = 599/728 (82.28%), Query Frame = 0


Query: 2   SSLLTNAFLPLLRSSHNPRLNFKQPNSASN--KWNGVV--CCSHDATFDEGQSVDERNRE 61
           S LLTN+FLPLL S           N+ +N  K +  V  CC  +       S+  +   
Sbjct: 3   SHLLTNSFLPLLSSKPTKSSTTTTTNNNNNNIKQSFYVADCCGDEERL---HSMTVKMSH 62

Query: 62  GERGVNKLERALNFTGDKPTTPILDTINYPNHMKNLSIQELQELSDEVREEIVYTVSKTG 121
           G  GV    +AL FTGDKP+TPILDTINYP HMKNLS++ELQELSDE+REEIVYTVSKTG
Sbjct: 63  GGGGV----KALKFTGDKPSTPILDTINYPIHMKNLSVEELQELSDEIREEIVYTVSKTG 122

Query: 122 GHLSSSLGVAELTVALHHVFSAPEDKIIWDVGHQAYAHKMLTGRRSRMHTIRKTFGLAGF 181
           GHLSSSLGVAELTVALHHVF+ PEDKIIWDVGHQAYAHKMLTGRR RMHTIR+TFGLAGF
Sbjct: 123 GHLSSSLGVAELTVALHHVFATPEDKIIWDVGHQAYAHKMLTGRRGRMHTIRQTFGLAGF 182

Query: 182 PKREESAFDAFGAGHSSTSISAGLGMAVARDILGKNNHVVSVIGDGAMTGGMAYEALNNA 241
           PKREES  DAFG GHSSTSISAGLGMAV RDILGKNNHVVSVIGDGAMTGGMAYEALNNA
Sbjct: 183 PKREESVHDAFGVGHSSTSISAGLGMAVGRDILGKNNHVVSVIGDGAMTGGMAYEALNNA 242

Query: 242 GFLDSNLIIILNDNRQVSLPTATIDGPAPAVGALSNALTRLQASKKFRQLREAAKGLTKQ 301
           G+LDSNLIIILNDNRQVSLPTATIDGPA  VGALS ALT+LQASKK RQLREAAK +TKQ
Sbjct: 243 GYLDSNLIIILNDNRQVSLPTATIDGPAAPVGALSKALTKLQASKKLRQLREAAKAVTKQ 302

Query: 302 MGGQAHEIAAKLDHCMKGIVGGSGASLFEELGIYYIGPVDGHDVEDLVYVLKRVKSMPAP 361
           MGG+ H IAAK++HC++G+VGG+GASLFEELGIYYIGPVDGH+VEDLVY+LK+VK+MPAP
Sbjct: 303 MGGETHGIAAKVEHCVRGMVGGTGASLFEELGIYYIGPVDGHNVEDLVYILKQVKAMPAP 362

Query: 362 GPVLIHVVTEKGKGYPPAEIAADKMHGVVEFDPRTGKQIKKKTETLSYTQYFADSLIAEA 421
           GPVLIHV+TEKGKGYPPAEIAADKMHGVV FDP++GKQ+KKKTETLSYTQYFADSLIAEA
Sbjct: 363 GPVLIHVITEKGKGYPPAEIAADKMHGVVNFDPKSGKQMKKKTETLSYTQYFADSLIAEA 422

Query: 422 ERDDKIIAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYS 481
           ERDDKI+AIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLA EGLKPFCAIYS
Sbjct: 423 ERDDKIVAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYS 482

Query: 482 SFLQRGYDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSN 541
           SFLQR YDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSN
Sbjct: 483 SFLQRAYDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSN 542

Query: 542 ETELMNMVATAAAIDDRPSCFRYPRGNGVGSVLPLHNKGTPLEVGKGRILREGNRVAILG 601
           E ELMNMVATAAAIDDRPSCFRYPRGNG+GSVLPL+NKGTPLEVGKGRILREGNRVAILG
Sbjct: 543 EEELMNMVATAAAIDDRPSCFRYPRGNGIGSVLPLNNKGTPLEVGKGRILREGNRVAILG 602

Query: 602 YGSIVQRCMAAA------------------------------------------------ 660
           YG+IVQ C+AAA                                                
Sbjct: 603 YGTIVQSCLAAANVLQEYGIQITVADARFCKPLDGELVKQLARQHEILLTVEEGSIGGFS 662

[Close]

BLAST of Cp4.1LG04g12880 vs. ExPASy TrEMBL
Match: A0A5A7UT66 (1-deoxy-D-xylulose-5-phosphate synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G006570 PE=3 SV=1)

HSP 1 Score: 1065 bits (2755), Expect = 0.0
Identity = 538/659 (81.64%), Postives = 571/659 (86.65%), Query Frame = 0


Query: 67  RALNFTGDKPTTPILDTINYPNHMKNLSIQELQELSDEVREEIVYTVSKTGGHLSSSLGV 126
           +AL FTGDKP+TPILDTINYP HMKNLS++ELQELSDE+REEIVYTVSKTGGHLSSSLGV
Sbjct: 13  KALKFTGDKPSTPILDTINYPIHMKNLSVEELQELSDEIREEIVYTVSKTGGHLSSSLGV 72

Query: 127 AELTVALHHVFSAPEDKIIWDVGHQAYAHKMLTGRRSRMHTIRKTFGLAGFPKREESAFD 186
           AELTVALHHVF+ PEDKIIWDVGHQAYAHKMLTGRR RMHTIR+TFGLAGFPKREES  D
Sbjct: 73  AELTVALHHVFATPEDKIIWDVGHQAYAHKMLTGRRGRMHTIRQTFGLAGFPKREESVHD 132

Query: 187 AFGAGHSSTSISAGLGMAVARDILGKNNHVVSVIGDGAMTGGMAYEALNNAGFLDSNLII 246
           AFG GHSSTSISAGLGMAV RDILGKNNHVVSVIGDGAMTGGMAYEALNNAG+LDSNLII
Sbjct: 133 AFGVGHSSTSISAGLGMAVGRDILGKNNHVVSVIGDGAMTGGMAYEALNNAGYLDSNLII 192

Query: 247 ILNDNRQVSLPTATIDGPAPAVGALSNALTRLQASKKFRQLREAAKGLTKQMGGQAHEIA 306
           ILNDNRQVSLPTATIDGPA  VGALS ALT+LQASKK RQLREAAK +TKQMGG+ H IA
Sbjct: 193 ILNDNRQVSLPTATIDGPAAPVGALSKALTKLQASKKLRQLREAAKAVTKQMGGETHGIA 252

Query: 307 AKLDHCMKGIVGGSGASLFEELGIYYIGPVDGHDVEDLVYVLKRVKSMPAPGPVLIHVVT 366
           AK++HC++G+VGG+GASLFEELGIYYIGPVDGH+VEDLVY+LK+VK+MPAPGPVLIHV+T
Sbjct: 253 AKVEHCVRGMVGGTGASLFEELGIYYIGPVDGHNVEDLVYILKQVKAMPAPGPVLIHVIT 312

Query: 367 EKGKGYPPAEIAADKMHGVVEFDPRTGKQIKKKTETLSYTQYFADSLIAEAERDDKIIAI 426
           EKGKGYPPAEIAADKMHGVV FDP++GKQ+KKKTETLSYTQYFADSLIAEAERDDKI+AI
Sbjct: 313 EKGKGYPPAEIAADKMHGVVNFDPKSGKQMKKKTETLSYTQYFADSLIAEAERDDKIVAI 372

Query: 427 HAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQ 486
           HAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLA EGLKPFCAIYSSFLQR YDQ
Sbjct: 373 HAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRAYDQ 432

Query: 487 VAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSNETELMNMVA 546
           VAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSNE ELMNMVA
Sbjct: 433 VAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSNEEELMNMVA 492

Query: 547 TAAAIDDRPSCFRYPRGNGVGSVLPLHNKGTPLEVGKGRILREGNRVAILGYGSIVQRCM 606
           TAAAIDDRPSCFRYPRGNG+GSVLPL+NKGTPLEVGKGRILREGNRVAILGYG+IVQ C+
Sbjct: 493 TAAAIDDRPSCFRYPRGNGIGSVLPLNNKGTPLEVGKGRILREGNRVAILGYGTIVQSCL 552

Query: 607 AAA--------------------------------------------------------- 660
           AAA                                                         
Sbjct: 553 AAANVLQEYGIQITVADARFCKPLDGELVKQLARQHEILLTVEEGSIGGFSSHVSHFLGL 612

[Close]

BLAST of Cp4.1LG04g12880 vs. TAIR 10
Match: AT4G15560.1 (Deoxyxylulose-5-phosphate synthase )

HSP 1 Score: 850.5 bits (2196), Expect = 9.0e-247
Identity = 415/649 (63.94%), Postives = 500/649 (77.04%), Query Frame = 0


Query: 71  FTGDKPTTPILDTINYPNHMKNLSIQELQELSDEVREEIVYTVSKTGGHLSSSLGVAELT 130
           +  ++P TP+LDTINYP HMKNLS++EL++LSDE+R ++++ VSKTGGHL SSLGV ELT
Sbjct: 67  YYSNRPPTPLLDTINYPIHMKNLSVKELKQLSDELRSDVIFNVSKTGGHLGSSLGVVELT 126

Query: 131 VALHHVFSAPEDKIIWDVGHQAYAHKMLTGRRSRMHTIRKTFGLAGFPKREESAFDAFGA 190
           VALH++F+ P+DKI+WDVGHQ+Y HK+LTGRR +M T+R+T GL+GF KR ES  D FG 
Sbjct: 127 VALHYIFNTPQDKILWDVGHQSYPHKILTGRRGKMPTMRQTNGLSGFTKRGESEHDCFGT 186

Query: 191 GHSSTSISAGLGMAVARDILGKNNHVVSVIGDGAMTGGMAYEALNNAGFLDSNLIIILND 250
           GHSST+ISAGLGMAV RD+ GKNN+VV+VIGDGAMT G AYEA+NNAG+LDS++I+ILND
Sbjct: 187 GHSSTTISAGLGMAVGRDLKGKNNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILND 246

Query: 251 NRQVSLPTATIDGPAPAVGALSNALTRLQASKKFRQLREAAKGLTKQMGGQAHEIAAKLD 310
           N+QVSLPTAT+DGP+P VGALS+AL+RLQ++   R+LRE AKG+TKQ+GG  H++AAK+D
Sbjct: 247 NKQVSLPTATLDGPSPPVGALSSALSRLQSNPALRELREVAKGMTKQIGGPMHQLAAKVD 306

Query: 311 HCMKGIVGGSGASLFEELGIYYIGPVDGHDVEDLVYVLKRVKSMPAPGPVLIHVVTEKGK 370
              +G++ G+G+SLFEELG+YYIGPVDGH+++DLV +LK VKS    GPVLIHVVTEKG+
Sbjct: 307 EYARGMISGTGSSLFEELGLYYIGPVDGHNIDDLVAILKEVKSTRTTGPVLIHVVTEKGR 366

Query: 371 GYPPAEIAADKMHGVVEFDPRTGKQIKKKTETLSYTQYFADSLIAEAERDDKIIAIHAAM 430
           GYP AE A DK HGVV+FDP TG+Q K   +T SYT YFA++L+AEAE D  ++AIHAAM
Sbjct: 367 GYPYAERADDKYHGVVKFDPATGRQFKTTNKTQSYTTYFAEALVAEAEVDKDVVAIHAAM 426

Query: 431 GGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVAHD 490
           GGGTGLN FQ+RFP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYSSF+QR YDQV HD
Sbjct: 427 GGGTGLNLFQRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHD 486

Query: 491 VDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSNETELMNMVATAAA 550
           VDLQKLPVRFA+DRAGLVGADGPTHCGAFD TFMACLPNM+VMAPS+E +L NMVATA A
Sbjct: 487 VDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMIVMAPSDEADLFNMVATAVA 546

Query: 551 IDDRPSCFRYPRGNGVGSVLPLHNKGTPLEVGKGRILREGNRVAILGYGSIVQRCMAAA- 610
           IDDRPSCFRYPRGNG+G  LP  NKG P+E+GKGRIL+EG RVA+LGYGS VQ C+ AA 
Sbjct: 547 IDDRPSCFRYPRGNGIGVALPPGNKGVPIEIGKGRILKEGERVALLGYGSAVQSCLGAAV 606

Query: 611 ------------------------------------------------------------ 655
                                                                       
Sbjct: 607 MLEERGLNVTVADARFCKPLDRALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLL 666

[Close]

BLAST of Cp4.1LG04g12880 vs. TAIR 10
Match: AT3G21500.2 (1-deoxy-D-xylulose 5-phosphate synthase 1 )

HSP 1 Score: 738.0 bits (1904), Expect = 6.5e-213
Identity = 361/539 (66.98%), Postives = 430/539 (79.78%), Query Frame = 0


Query: 71  FTGDKPTTPILDTINYPNHMKNLSIQELQELSDEVREEIVYTVSKTGGHLSSSLGVAELT 130
           +  ++P TP+LDTIN+P HMKNLSI+EL+ LSDE+R ++++ VSKTGGHL S+LGV ELT
Sbjct: 57  YYSNRPPTPLLDTINHPMHMKNLSIKELKVLSDELRSDVIFNVSKTGGHLGSNLGVVELT 116

Query: 131 VALHHVFSAPEDKIIWDVGHQAYAHKMLTGRRSRMHTIRKTFGLAGFPKREESAFDAFGA 190
           VALH++F+ P DKI+WDVGHQ+Y HK+LTGRR +M TIR+T GL+G+ KR ES  D+FG 
Sbjct: 117 VALHYIFNTPHDKILWDVGHQSYPHKILTGRRGKMKTIRQTNGLSGYTKRRESEHDSFGT 176

Query: 191 GHSSTSISAGLGMAVARDILGKNNHVVSVIGDGAMTGGMAYEALNNAGFLDSNLIIILND 250
           GHSST++SAGLGMAV RD+ G NN VVSVIGDGAMT G AYEA+NNAG+L SN+I+ILND
Sbjct: 177 GHSSTTLSAGLGMAVGRDLKGMNNSVVSVIGDGAMTAGQAYEAMNNAGYLHSNMIVILND 236

Query: 251 NRQVSLPTATIDGPAPAVGALSNALTRLQASKKFRQLREAAKGLTKQMGGQAHEIAAKLD 310
           N+QVSLPTA +DGP   VGALS AL+RLQ+                              
Sbjct: 237 NKQVSLPTANLDGPTQPVGALSCALSRLQS------------------------------ 296

Query: 311 HCMKGIVGGSGASLFEELGIYYIGPVDGHDVEDLVYVLKRVKSMPAPGPVLIHVVTEKGK 370
           +C  G++  + ++LFEELG +Y+GPVDGH+++DLV +L+ +KS    GPVLIHVVTEKG+
Sbjct: 297 NC--GMIRETSSTLFEELGFHYVGPVDGHNIDDLVSILETLKSTKTIGPVLIHVVTEKGR 356

Query: 371 GYPPAEIAADKMHGVVEFDPRTGKQIKKKTETLSYTQYFADSLIAEAERDDKIIAIHAAM 430
           GYP AE A DK HGV++FDP TGKQ K  ++T SYT  F ++LIAEAE D  I+AIHAAM
Sbjct: 357 GYPYAERADDKYHGVLKFDPETGKQFKNISKTQSYTSCFVEALIAEAEADKDIVAIHAAM 416

Query: 431 GGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVAHD 490
           GGGT LN F+ RFP RCFDVGIAEQHAVTFAAGLA EGLKPFC IYSSF+QR YDQV HD
Sbjct: 417 GGGTMLNLFESRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCTIYSSFMQRAYDQVVHD 476

Query: 491 VDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSNETELMNMVATAAA 550
           VDLQKLPVRFAIDRAGL+GADGPTHCGAFD TFMACLPNM+VMAPS+E EL NMVATAAA
Sbjct: 477 VDLQKLPVRFAIDRAGLMGADGPTHCGAFDVTFMACLPNMIVMAPSDEAELFNMVATAAA 536

Query: 551 IDDRPSCFRYPRGNGVGSVLPLHNKGTPLEVGKGRILREGNRVAILGYGSIVQRCMAAA 610
           IDDRPSCFRY RGNG+G  LP  NKG PL++G+GRILR+G RVA+LGYGS VQRC+ AA
Sbjct: 537 IDDRPSCFRYHRGNGIGVSLPPGNKGVPLQIGRGRILRDGERVALLGYGSAVQRCLEAA 563

[Close]

BLAST of Cp4.1LG04g12880 vs. TAIR 10
Match: AT3G21500.1 (1-deoxy-D-xylulose 5-phosphate synthase 1 )

HSP 1 Score: 731.1 bits (1886), Expect = 7.9e-211
Identity = 360/539 (66.79%), Postives = 429/539 (79.59%), Query Frame = 0


Query: 71  FTGDKPTTPILDTINYPNHMKNLSIQELQELSDEVREEIVYTVSKTGGHLSSSLGVAELT 130
           +  ++P TP+LDTIN+P HMKNLSI+EL+ LSDE+R ++++ VSKTGGHL S+LGV ELT
Sbjct: 57  YYSNRPPTPLLDTINHPMHMKNLSIKELKVLSDELRSDVIFNVSKTGGHLGSNLGVVELT 116

Query: 131 VALHHVFSAPEDKIIWDVGHQAYAHKMLTGRRSRMHTIRKTFGLAGFPKREESAFDAFGA 190
           VALH++F+ P DKI+WDVGHQ+Y HK+LTGRR +M TIR+T GL+G+ KR ES  D+FG 
Sbjct: 117 VALHYIFNTPHDKILWDVGHQSYPHKILTGRRGKMKTIRQTNGLSGYTKRRESEHDSFGT 176

Query: 191 GHSSTSISAGLGMAVARDILGKNNHVVSVIGDGAMTGGMAYEALNNAGFLDSNLIIILND 250
           GHSST++SAGLGMAV RD+ G NN VVSVIGDGAMT G AYEA+NNAG+L SN+I+ILND
Sbjct: 177 GHSSTTLSAGLGMAVGRDLKGMNNSVVSVIGDGAMTAGQAYEAMNNAGYLHSNMIVILND 236

Query: 251 NRQVSLPTATIDGPAPAVGALSNALTRLQASKKFRQLREAAKGLTKQMGGQAHEIAAKLD 310
           N+QVSLPTA +DGP   VGALS AL+RLQ+                              
Sbjct: 237 NKQVSLPTANLDGPTQPVGALSCALSRLQS------------------------------ 296

Query: 311 HCMKGIVGGSGASLFEELGIYYIGPVDGHDVEDLVYVLKRVKSMPAPGPVLIHVVTEKGK 370
           +C  G++  + ++LFEELG +Y+GPVDGH+++DLV +L+ +KS    GPVLIHVVTEKG+
Sbjct: 297 NC--GMIRETSSTLFEELGFHYVGPVDGHNIDDLVSILETLKSTKTIGPVLIHVVTEKGR 356

Query: 371 GYPPAEIAADKMHGVVEFDPRTGKQIKKKTETLSYTQYFADSLIAEAERDDKIIAIHAAM 430
           GYP AE A DK H V++FDP TGKQ K  ++T SYT  F ++LIAEAE D  I+AIHAAM
Sbjct: 357 GYPYAERADDKYH-VLKFDPETGKQFKNISKTQSYTSCFVEALIAEAEADKDIVAIHAAM 416

Query: 431 GGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVAHD 490
           GGGT LN F+ RFP RCFDVGIAEQHAVTFAAGLA EGLKPFC IYSSF+QR YDQV HD
Sbjct: 417 GGGTMLNLFESRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCTIYSSFMQRAYDQVVHD 476

Query: 491 VDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSNETELMNMVATAAA 550
           VDLQKLPVRFAIDRAGL+GADGPTHCGAFD TFMACLPNM+VMAPS+E EL NMVATAAA
Sbjct: 477 VDLQKLPVRFAIDRAGLMGADGPTHCGAFDVTFMACLPNMIVMAPSDEAELFNMVATAAA 536

Query: 551 IDDRPSCFRYPRGNGVGSVLPLHNKGTPLEVGKGRILREGNRVAILGYGSIVQRCMAAA 610
           IDDRPSCFRY RGNG+G  LP  NKG PL++G+GRILR+G RVA+LGYGS VQRC+ AA
Sbjct: 537 IDDRPSCFRYHRGNGIGVSLPPGNKGVPLQIGRGRILRDGERVALLGYGSAVQRCLEAA 562

[Close]

BLAST of Cp4.1LG04g12880 vs. TAIR 10
Match: AT5G11380.1 (1-deoxy-D-xylulose 5-phosphate synthase 3 )

HSP 1 Score: 538.1 bits (1385), Expect = 9.8e-153
Identity = 296/655 (45.19%), Postives = 411/655 (62.75%), Query Frame = 0


Query: 71  FTGDKPTTPILDTINYPNHMKNLSIQELQELSDEVREEIVYTV-SKTGGHLSSSLGVAEL 130
           +  +K  TPILD+I  P  +KNLS++EL+ L+DE+R E+   +  KT   ++ S    EL
Sbjct: 68  YCDEKFETPILDSIETPLQLKNLSVKELKLLADEIRTELHSVLWKKTQKSMNPSFAAIEL 127

Query: 131 TVALHHVFSAPEDKIIWDVGHQAYAHKMLTGRRSRMHTIRKTFGLAGFPKREESAFDAFG 190
           T+ALH+VF AP D I+WD   Q YAHK+LT R S + + R+  G++G   R ES +D+FG
Sbjct: 128 TLALHYVFRAPVDNILWDAVEQTYAHKVLTRRWSAIPS-RQNSGISGVTSRLESEYDSFG 187

Query: 191 AGHSSTSISAGLGMAVARDILGKNNHVVSVIGDGAMTGGMAYEALNNAGFLDSNLIIILN 250
            GH   SISAGLG+AVARD+ GK + VV+VI +  +T G AYEA++NAG+LDSN+I+ILN
Sbjct: 188 TGHGCNSISAGLGLAVARDMKGKRDRVVAVIDNVTITAGQAYEAMSNAGYLDSNMIVILN 247

Query: 251 DNRQVSLPTATIDGPAPAVGALSNALTRLQASKKFRQLREAAKGLTKQMGGQAHEIAAKL 310
           D+R  SL     +G   ++ ALS+ ++++Q+SK FR+ RE AK +TK++G   +E AAK+
Sbjct: 248 DSRH-SLHPNMEEGSKASISALSSIMSKIQSSKVFRKFRELAKAMTKRIGKGMYEWAAKV 307

Query: 311 DHCMKGIVGGSGASLFEELGIYYIGPVDGHDVEDLVYVLKRVKSMPAPGPVLIHVVTEKG 370
           D   +G+VG +G++LFEELG+YYIGPVDGH++EDLV VL+ V S+ + GPVL+HV+TE  
Sbjct: 308 DEYARGMVGPTGSTLFEELGLYYIGPVDGHNIEDLVCVLREVSSLDSMGPVLVHVITEGN 367

Query: 371 KGYPPAEIAADKMHGVVEFDPRTGKQIKKKTETLSYTQYFADSLIAEAERDDKIIAIHAA 430
           +                  D  T K I  K +  +Y+  F ++L+ EAE+D  I+ +HA 
Sbjct: 368 R------------------DAETVKNIMVK-DRRTYSDCFVEALVMEAEKDRDIVVVHAG 427

Query: 431 MGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVAH 490
           M     L  FQ+RFPDR F+VG+AEQHAVTF+AGL++ GLKPFC I S+FLQR YDQV H
Sbjct: 428 MEMDPSLLTFQERFPDRFFNVGMAEQHAVTFSAGLSSGGLKPFCIIPSAFLQRAYDQVVH 487

Query: 491 DVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSNETELMNMVATAA 550
           DVD Q+  VRF I  AGLVG+DGP  CGAFD  FM+ LPNM+ MAP++E EL+NMVATAA
Sbjct: 488 DVDRQRKAVRFVITSAGLVGSDGPVQCGAFDIAFMSSLPNMIAMAPADEDELVNMVATAA 547

Query: 551 AIDDRPSCFRYPRGNGVGSVLPLHNKGTPLEVGKGRILREGNRVAILGYGSIVQRCMAA- 610
            + DRP CFR+PRG+ + ++  L   G P+E+G+GR+L EG  VA+LGYG++VQ C+ A 
Sbjct: 548 YVTDRPVCFRFPRGS-IVNMNYLVPTGLPIEIGRGRVLVEGQDVALLGYGAMVQNCLHAH 607

Query: 611 ------------------------------------------------------------ 660
                                                                       
Sbjct: 608 SLLSKLGLNVTVADARFCKPLDIKLVRDLCQNHKFLITVEEGCVGGFGSHVAQFIALDGQ 667

[Close]

BLAST of Cp4.1LG04g12880 vs. TAIR 10
Match: AT5G11380.2 (1-deoxy-D-xylulose 5-phosphate synthase 3 )

HSP 1 Score: 488.8 bits (1257), Expect = 6.9e-138
Identity = 259/511 (50.68%), Postives = 354/511 (69.28%), Query Frame = 0


Query: 71  FTGDKPTTPILDTINYPNHMKNLSIQELQELSDEVREEIVYTV-SKTGGHLSSSLGVAEL 130
           +  +K  TPILD+I  P  +KNLS++EL+ L+DE+R E+   +  KT   ++ S    EL
Sbjct: 68  YCDEKFETPILDSIETPLQLKNLSVKELKLLADEIRTELHSVLWKKTQKSMNPSFAAIEL 127

Query: 131 TVALHHVFSAPEDKIIWDVGHQAYAHKMLTGRRSRMHTIRKTFGLAGFPKREESAFDAFG 190
           T+ALH+VF AP D I+WD   Q YAHK+LT R S + + R+  G++G   R ES +D+FG
Sbjct: 128 TLALHYVFRAPVDNILWDAVEQTYAHKVLTRRWSAIPS-RQNSGISGVTSRLESEYDSFG 187

Query: 191 AGHSSTSISAGLGMAVARDILGKNNHVVSVIGDGAMTGGMAYEALNNAGFLDSNLIIILN 250
            GH   SISAGLG+AVARD+ GK + VV+VI +  +T G AYEA++NAG+LDSN+I+ILN
Sbjct: 188 TGHGCNSISAGLGLAVARDMKGKRDRVVAVIDNVTITAGQAYEAMSNAGYLDSNMIVILN 247

Query: 251 DNRQVSLPTATIDGPAPAVGALSNALTRLQASKKFRQLREAAKGLTKQMGGQAHEIAAKL 310
           D+R  SL     +G   ++ ALS+ ++++Q+SK FR+ RE AK +TK++G   +E AAK+
Sbjct: 248 DSRH-SLHPNMEEGSKASISALSSIMSKIQSSKVFRKFRELAKAMTKRIGKGMYEWAAKV 307

Query: 311 DHCMKGIVGGSGASLFEELGIYYIGPVDGHDVEDLVYVLKRVKSMPAPGPVLIHVVTEKG 370
           D   +G+VG +G++LFEELG+YYIGPVDGH++EDLV VL+ V S+ + GPVL+HV+TE  
Sbjct: 308 DEYARGMVGPTGSTLFEELGLYYIGPVDGHNIEDLVCVLREVSSLDSMGPVLVHVITEGN 367

Query: 371 KGYPPAEIAADKMHGVVEFDPRTGKQIKKKTETLSYTQYFADSLIAEAERDDKIIAIHAA 430
           +                  D  T K I  K +  +Y+  F ++L+ EAE+D  I+ +HA 
Sbjct: 368 R------------------DAETVKNIMVK-DRRTYSDCFVEALVMEAEKDRDIVVVHAG 427

Query: 431 MGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVAH 490
           M     L  FQ+RFPDR F+VG+AEQHAVTF+AGL++ GLKPFC I S+FLQR YDQV H
Sbjct: 428 MEMDPSLLTFQERFPDRFFNVGMAEQHAVTFSAGLSSGGLKPFCIIPSAFLQRAYDQVVH 487

Query: 491 DVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSNETELMNMVATAA 550
           DVD Q+  VRF I  AGLVG+DGP  CGAFD  FM+ LPNM+ MAP++E EL+NMVATAA
Sbjct: 488 DVDRQRKAVRFVITSAGLVGSDGPVQCGAFDIAFMSSLPNMIAMAPADEDELVNMVATAA 547

Query: 551 AIDDRPSCFRYPRGNGVGSVLPLHNKGTPLE 581
            + DRP CFR+PRG+ + ++  L   G P+E
Sbjct: 548 YVTDRPVCFRFPRGS-IVNMNYLVPTGLPIE 556

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g12880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6YU51	2.6e-267	69.27	Probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic OS=Oryza sativ...	[more]
O22567	5.5e-249	63.68	1-deoxy-D-xylulose-5-phosphate synthase 1, chloroplastic OS=Oryza sativa subsp. ...	[more]
O78328	5.1e-247	61.88	Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Capsicum annu...	[more]
Q38854	1.3e-245	63.94	1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q89RW1	2.5e-177	56.55	1-deoxy-D-xylulose-5-phosphate synthase OS=Bradyrhizobium diazoefficiens (strain...	[more]

BLAST of Cp4.1LG04g12880 vs. NCBI nr


Match Name	Identity	Description
XP_023529489.1	91.03	probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic [Cucurbita pep...	[more]
XP_022933598.1	90.48	probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic [Cucurbita mos...	[more]
XP_022973482.1	89.52	probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic [Cucurbita max...	[more]
KAG7035723.1	89.34	putative 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic, partial [Cucu...	[more]
KAG6587773.1	83.33	putative 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic, partial [Cucu...	[more]

BLAST of Cp4.1LG04g12880 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1F592	90.48	1-deoxy-D-xylulose-5-phosphate synthase OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1I7N0	89.52	1-deoxy-D-xylulose-5-phosphate synthase OS=Cucurbita maxima OX=3661 GN=LOC111472...	[more]
A0A6J1BYW4	77.45	1-deoxy-D-xylulose-5-phosphate synthase OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A1S3BXJ4	76.79	1-deoxy-D-xylulose-5-phosphate synthase OS=Cucumis melo OX=3656 GN=LOC103494295 ...	[more]
A0A5A7UT66	81.64	1-deoxy-D-xylulose-5-phosphate synthase OS=Cucumis melo var. makuwa OX=1194695 G...	[more]

BLAST of Cp4.1LG04g12880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15560.1	9.0e-247	63.94	Deoxyxylulose-5-phosphate synthase	[more]
AT3G21500.2	6.5e-213	66.98	1-deoxy-D-xylulose 5-phosphate synthase 1	[more]
AT3G21500.1	7.9e-211	66.79	1-deoxy-D-xylulose 5-phosphate synthase 1	[more]
AT5G11380.1	9.8e-153	45.19	1-deoxy-D-xylulose 5-phosphate synthase 3	[more]
AT5G11380.2	6.9e-138	50.68	1-deoxy-D-xylulose 5-phosphate synthase 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005475	Transketolase-like, pyrimidine-binding domain	SMART	SM00861	Transket_pyr_3	coord: 403..568 e-value: 2.2E-65 score: 233.2
IPR005475	Transketolase-like, pyrimidine-binding domain	PFAM	PF02779	Transket_pyr	coord: 402..564 e-value: 1.8E-39 score: 135.3
None	No IPR available	GENE3D	3.40.50.970		coord: 73..375 e-value: 4.2E-83 score: 280.2
None	No IPR available	GENE3D	3.40.50.970		coord: 403..569 e-value: 6.4E-55 score: 187.0
None	No IPR available	PANTHER	PTHR43322:SF6	1-DEOXY-D-XYLULOSE-5-PHOSPHATE SYNTHASE 2, CHLOROPLASTIC ISOFORM X1-RELATED	coord: 610..659 coord: 27..610
None	No IPR available	CDD	cd07033	TPP_PYR_DXS_TK_like	coord: 409..562 e-value: 4.37676E-70 score: 222.702
IPR009014	Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II	GENE3D	3.40.50.920		coord: 578..625 e-value: 2.7E-5 score: 26.1
IPR009014	Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II	SUPERFAMILY	52922	TK C-terminal domain-like	coord: 577..648
IPR005477	Deoxyxylulose-5-phosphate synthase	PFAM	PF13292	DXP_synthase_N	coord: 81..366 e-value: 1.1E-109 score: 365.8
IPR005477	Deoxyxylulose-5-phosphate synthase	TIGRFAM	TIGR00204	TIGR00204	coord: 83..610 e-value: 2.2E-205 score: 681.7
IPR005477	Deoxyxylulose-5-phosphate synthase	PANTHER	PTHR43322	1-D-DEOXYXYLULOSE 5-PHOSPHATE SYNTHASE-RELATED	coord: 27..610
IPR005477	Deoxyxylulose-5-phosphate synthase	PANTHER	PTHR43322	1-D-DEOXYXYLULOSE 5-PHOSPHATE SYNTHASE-RELATED	coord: 610..659
IPR005477	Deoxyxylulose-5-phosphate synthase	HAMAP	MF_00315	DXP_synth	coord: 80..649 score: 36.972446
IPR005477	Deoxyxylulose-5-phosphate synthase	CDD	cd02007	TPP_DXS	coord: 117..372 e-value: 1.39069E-115 score: 342.219
IPR020826	Transketolase binding site	PROSITE	PS00802	TRANSKETOLASE_2	coord: 509..525
IPR029061	Thiamin diphosphate-binding fold	SUPERFAMILY	52518	Thiamin diphosphate-binding fold (THDP-binding)	coord: 78..465
IPR029061	Thiamin diphosphate-binding fold	SUPERFAMILY	52518	Thiamin diphosphate-binding fold (THDP-binding)	coord: 400..591

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g12880.1	Cp4.1LG04g12880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0052865	1-deoxy-D-xylulose 5-phosphate biosynthetic process
biological_process	GO:0016114	terpenoid biosynthetic process
biological_process	GO:0009228	thiamine biosynthetic process
molecular_function	GO:0008661	1-deoxy-D-xylulose-5-phosphate synthase activity
molecular_function	GO:0003824	catalytic activity