Cp4.1LG04g12460 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG04g12460
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Histone deacetylase
Location	Cp4.1LG04: 8080369 .. 8093452 (-)
RNA-Seq Expression	Cp4.1LG04g12460
Synteny	Cp4.1LG04g12460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAGTCAAAGGACTCGTTTGCAAAATGGGTCATTTTCTTTTTACCTCGATTTGCAACAATGGAAATGGATGGGCGACTCCCGCTGCCGTACTAGTGCTTTGGCCATGGAGCTGAAGCGACTCATCTTTGCTTAGCGCAGGTTTGATTATTCATCACTCTTCTTCCTTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTATCTTTCCCGCTAATCTTCTCTTCAGTTTCGTTTTGAAAATCTCACTGATTCGATCCCGATGGACGCCCCGTTTGAATCGTTCTTCTCTAAATGTTTCTGTTGGAAGTTAGGGTTTCTATTTGTTCTTATTATAATTTTGTGTTCCGTCTTTCAGAATTCACATTTCTCTCCCCATGTATTGGTTGAATTTTTGTAGTGACTGTATATGCTGGGTTGTAGCTCACCCAAGTTTCACTTGAGAGTACAGGATTTTCACTCCACAGGGTTCTGAAGAGAGGAGATGATTGATTAGGTGTGATGAAAGTTTGTTTGTTACAAGTTTCAAGTGCTAGTTTAAACATGCGTATCCACCTATTTATGTAGTGCAAGGTAGGGTTGGGGGTGGGGTTTTAATAGTTGAAATTTTAAATATGCAATGGGGAATGAAGTTCCTCAAGAAAGAGCGGTCAAGAAAGCCGCATAACCACCGTTTGTAATGCATTCTGGTGGTACTGAGGGGTACAACAATCTTGAAGAGTTTTCTTTTGTGTTTGAGGGTCATGAATGAATATAGGAAGAAGTTCTCAGTTTTCTAGGAAGTGTTTGATGTATCGATAGACGATAGCTAAGAGGCATAGACTTGGTGGTTAACTACAAACCTTAAGCATTCCGGTTGGAAAGGGGGGCGTGTTGTAGTGAATGTCACGACAAGACCTCTAGAGATAGTGGGAGGTGCACCATGATTTTTAGTGATGGTAGATCGTTTGAAAAGGACGTATGCCATGTTGTCGTGCTAGGACTATACCTATAGAGACAATTAGATCTCATGGTATACCTACGAGATAGTGTTGGGTAGAGACTCTCAAGTTATATTGATGTTATGACAAGTTTGACTCCTATACTCTGTGAGAATGTAGTACAACATTTAATCACCAAACTGATATCCCAACAGGGATGTTGAGTATGAATCTGAAACATACATGTTTCGTGTCTATGTGTTGTAGTTTAGTAGTAGCTGGGACATTCACTTGCTCTCATGAAATTCACAGGTAGTTACAGCTATTCGACGACAATTGATATGATACCCTTCGAAGCCATTTCAGGGGAAAAGGTGCAAAAGGTCCTAGAGAGCAAGTTGTTTAGTCCTGTTATAGTGTGAGGAGGGCGTAAGTGGCTTTAACGGCGTGAAGCATATACCCTTTAGGCACAAGATGCAAAAGTAGTAAGAGCCTCAACGAGACAAAGTACACAATGTATAAAGTGTACATTTTTCAGCAAAGAATATTAAAAATCCGCGTGAAATATGATTGAAAATTTGAAGACTGATGAAGTTTAAGGACAGAGTTTTGATTTCTTACAAATAAACCGCACAATCAATCGCAGAGATCTAAAAATTTAAACCTGTCATCACTGAGTAATTTCTTCCTTCCAATTTTGTTCATCAATAGAGTACAGTCCTCCATATTTTATGTTTTTAATTCAGTCATATTTCATGTTCCTTCGCATTTATTAGAGAGAGTGAGAGGGCACATTTCGGGTGAGAATGTTGAACAAAGGAGAACTACTAGTTTTTGTTTAAGTTTTCTCTTATTTACCTGATTTAGCCATAGTTTATTAAAACATTTGTTGCATCTAAGCGAGAAGTGCATGTGAATATGGTTGAGGCACATGATCCAGCGCACTTAAGAGCACCCATTTTGGGACTTTGTGGAACAAGGCCTATAAGTTGCTAAAGGCAGTAGCTGAAACTTAAATTTAGCGTGTTCACATTATTGCTAACTGGGAAGCTTTTTTTTTTTTTTTTTGGGGTAATCCCTTGGCTTGGTGGAGACTACTCTGCTCCATCTTTATAGTGAAAGTGTAACAACCCAAAAAACCTTGGGGGGAAGTCCAGAAGGGAAAGCCCAAAGAGGATAATATCTGTTAGTGGTGGGCTTGGGTTGTTACAAATTGTATCAGAGCCAGACATCGGGTGGCGTGCCACCGACGACGATGGGCTCCCAAGGGGAGTGGATTGTGAGATCTCACATCGGTTGGAGAGGAGAACAAAACATTTCTTTTAAGGGTGTGAAAACCTCTCCTTAACAGATGCGTTTTAAAACTTTGAGGGGAAGCCCAGAAGAGAAAGCCTAAAGAAGACAATATCTGCTAGCGGTGGGCTTGGACTGTTATAGAAAATCTAGTTTCTTACAAATAAACAACTTAAATTTAAAGTTGGATTCTTAGTAGCCTCATGCATGGATATTGAATCTCTAAAGGTTGTCACCAATTTCCATGTCCTTTGCCCATCTGTTGCTCTTTCTCACTCTGCTCTTTTGTTTGTATTGTTTATTTATCATTATTACTTTTGTTGATGGAATGACTGTTTCGTACTCGTCAGTTGGATCTTCATCTCTCTTTCATGATTTATTTACCACATACTTATTTTGGTTCTTTGGTTTTAGTAGTTATTGTCTTGCTGATGACATTAACTGATGAACATTTTCACCCAACTCCTGAACACAAGGCATAATGGTTTCAGAAATACTTCAACAGAGTCATCTAGTGGATGGGGAGGCTGAAGTAAATCTTCAGAAGCAAGGCAACGAACTCCCAAGTCAAATTTTGAATGGAAGACATGGAAAATCAGGCTCTGATAGAAGTAGTGTTAGACCTAGTTTAGATTATAACTGTGGAGATGATAATACTGGCATAGCTTCTTATAGGGATGTACCAAGCAGCGTAAATATAGATATTCAACCCGATACTTTACGTGTAAGTAAAACATGATTTCATTAGTAACTGATGACTATGTCCTTTTACTGCACTGTGTGTAAATACAATATGGTTTTACTTCAGAAGAAGGCAAGGCAGCAGAGAGAAATGACATTCCAAGATATGTGTAACAACCTGGACATCTTTGAGGATGATGATGAGGATGACGACGATGATAGTGACTGGGAACCTTTACAGAAACTCAGGGAAATAATGAAGTGGTTCTGTACAAATTGTACCATGGCCAACCTCGATGTTGCCGTACATTGTGACGTCTGTTTGTACTCCTTTTCAACATAATTTCCCTTTTTCTTCTGTCAACTTTTGTGTTCTGCATATTTAGGTGCATATTTTCTCTTGCAGTCATGTGGAGAACATAGAGAATCAGGAATATTGAAGCATGGGTTTTTTGCTCCTTCATTTTTACACGAATCAACTTTATTAGAGGCTGAGCTAGAAACGAGAACTGACAAAGGTGAGTCATGTTCTTGCTATTGGACATGTAGTGTTATCTTTCATTTTAATTCCTTAACCTTCTTCTTCTCTATGTATTCATGTATTCTTTTTTATTTTATTCGTTTGGTGAATGGGTGGTCATATTTCTGGTCATCTCGTATTATTTATTTTTTTAATATATGAGAAAACTGGCTGATGTTTTCGTTGAAAAATTACCAGATATAACGGCAGTATGGATATGTGGTGAAGTTATAATATTCTGAATTTAATTGGATGTATTATATTTCCCCGGCTATTTCTTTTCTCCTCTCTGTCATTTGATACGTGTGCTGTGATCATTTTTCAATCAACGTTTGTATAAGTTCTTGTATTAAGATATTGGACCCTTTTGTGTCAACCATTTGACACATCTCTCCAACACTATGAAAGTTGCAAATCTTAGGGAGAATTGACGCTTTTTCCTGGTTAGCTTTGGGGAGTATTAACAGCTTGGACAAATCCTAAGAAATCTCTTCTTTTACTTGGTTTTCATTGGTGTGCTGTGTTCGTGGGTGTCTTTGAAGATTTTTTTCTTTGATGGTGTGGTGTTGGCTTCTGATAGAGAGTTGGCATTTCTAGGGGTCTTTTGTTTTGTTTCCTCCTCTCTCTGTCTCTTGGAAAACCAAGCTTTCATTAAGAAGAAATGAAATGGCACAAGAGGGCCAACATTGGCCAGAAGATGAAAAATGGGCCTACAAAGACGATAGCCCAAAAGGAGACAAATAAGTACTAGCCTAATGAACAAGAAAAAAGCTCCAATCCAGAAGGAAAAGAATCCTTTTGAGTATCTATAAGATACTAATATGATGGAGAAAATTATGTTGGACCTTTTGTTTAAGGATTAAGGTCATTTTCCATTGCGAGTCGGTTTTTACACTATTTGAATGAAGGAGCCTTGGGTATAACAGGTATTTGAAGGCTTTGGAGTTTTGACGCATTTTAAGGTCTCTCTTTAGTTGGAACTTTAGCTATTTTGTAATTATCCCCTTTTCCAGTCACCAATAGTTGTCTGCTGCTTGTAATTTCAGTTTTTCTTGGTAGTCCTTGTTTTTATGTCTTTTTTTTACTTTCATTGGTCGTTATTTATTGCTTTCAAGAGTCTAACTGCAGTTATTCTTATGCTGTATTTGCAGGCATGGTTTCACAAGTATCAACGTCTAATAGTTCCACGGCAATAGGCTTTGATGAGAGAATGTTGCTGCATTCAGAAGTATGGGAATTTGTTTAAAACTTTTATGTTCTAGATTCTCAAGCATTCTATTTTTTTTTCCATTTCTTTTGTTTCTCTATGTGTGGATGCAACACATGTCTTCTCCTGTGTTCTCCCGTGGAAACCTCATGGTTTAATTCTATACTGCAAATTTCTTTTTCATGTGAAATAAGGGGGCTGTCCGGAAAGCTAAAGCTACAATATGAGGAGAGTCTCATGTTGTGAAATATGTTTTCTGTTATCCACTTTGCTCCTACATAGTGTTTCCTTTACAATAAAGTTACAGAGGACCAAATTCATCTTCTCCTTCATTGCAACTAAGTTCTAGAGCTTCCTACCCATCTCTAAGGCTTATCCTAGTGTTCATTCCTATTGCTAAATATGGCTTTGATACAGCTGATATATGCTCATTTTTCTACTTAAGTTATTTGGACAAATGTTGTCATGGATCACTCTTTTGGAGGCTTTAGTTTAAAATAAACCAAAGAACTTTGGGGGTTTTTTACCCTAGTTTGGATGAGTTTTGGGATTTGGTTAAATTTCTAGCTTCCTCCTGTCAAGATTTTTTTACTTTATAATATGGTTGCCAACTGGGAGCCGTTTCTAAATTCCCTTGGCCTTGAGGGCAAGTCCTTATCCCTCCTTTTTGTAATCTTCTCTTCCTTAATAAAAATGTTTTTTCGTATAAAAAAGGAAAGAAAAAAAGAAAAAGAAAAATGTAACATGTCTAAATGTGTTCTTATTTAATTTAATCTTCTCTTCTTTAATAAAAACGTTTTCTTTCCCTTTTTAAAATCTAAATTTAATTTATTTTTATTGTTTCGATTTGTTTATGCAAATGGCATGTCACTGTGTTCTTATTTGTTATATCCATGCTCTTGTCTGGGTCTGTGGTTTAGATTGAAAATGATTTTTGCATACTATGTTGTTGGAAACTTTTTTAAGTCGTTGGTTTTCTAGAACTTTACTTCCTGTTTGGTGGTGTTCTTGCTAGAGAAGGTTGAAATGAAGTCACACCCGCACCCAGAAAGACCAGATCGTCTGAGAGCTATTGCTGCTAGCTTGGCTACAGCTGGTAATCTTTACTTCACCGTTTTTTTGTTTTTTGTTTTGTTTTGTTTTTTTTTTGTTTTTTGTTTTTAAGGTAGGAAATATTTGGGTTAATGATTACTATTTAATATGTTTTTATATAGTTTATTGCTTTCAATCTTTTATCATTGGATTCTAAGCAATGGAAATTTTTTATTGCGTATAGGAATTTTTCCTGGAAGATGCTATCCTATCCCAGCGAGAGAAATTACCAAAGAAGAACTTGAGATGGTAAGGAACTACATTTATTTTCAGGCATTCTTTTAAATTTGGTGAGAACTAATTTCATTGGTAGATGAAGTATCCAAAAGGAATCTAAAGCCTCGTAAATGCCATCTGGTGGAAAGCTACCCAATCAAATAGGGATGATGATAATAGAAATTGGGCAATTACAAAAATGAACTATAAAGAGGAATCTAAGTTTTATATAAAGAAGAAAAATGAATGATGAGCATACTCTAAAATTTTGACATAAATTTTTTTGATATAGACATTGACAAGTAATGGTGGGTGGTATAGATTTGTTTACTAATGTTGACTGATATATCAATGAATATGCATGAAAATTGATGATGTGGTTACTGGTAACAATTTTCATAAATGTTGTATCAATGAAATATCATGGATGATAAGGGAATTATTGACAAAATGTTGATGATTGGAGGAAAAAAAGTGTCATGTGAATCGATGTTCATTATTTTAATTTGTGGATTTGTCCATAGATATCTTGATAGTAATGCTGGTACTTTTTCCTTAAATATGACTTCCCTTCATTTATCTTATGAGAAGCATTTTGTGATTTACCGTTATTTTATGAGAATCATTTTGTGATTTATTTATTTTACTATACACTGGGATAAAGGTTCACTCCGCGGAGAATATTCAAGCTGTTGAGGTGTCGAGCAATGTTATTTCTTGGTATGTTCATAATGGCCATTCTCTCTCTATTGTTTGTTATATAGAATGATAAAATGCAGTTGCTTCTATCTGACTAGATTATATATGACCTTGTTTATTGTATATTCAAGTATGAATGATGAAATAAACTTTTTGTAACTCATGCTGACTCAAATGGAAAGAATTAATTGTAGACCCAGTCCTTGTGGACAATGAAACCATAGAGGTTTATAGAAAGAGGAACCTTAAAGGCATTGTATTTAAGATTGAATTGAGAAGGCCTATGATTACATGACTAAATGTTTTTGGATAAGGCTTTCGAGAAGAAGGGGTTTGGTTATAAGTGTGGAGGTCTAGGATGTCGAGTTGCGTCAGAAATGTGAAGGAGGTCGAGAGGGATGATTTTTACCTCTAGAGGTCTTAGGCAGGTAGTCTCTTTCTCTCCTTTTCTTTTTATTCGAGTGGTCGATGTTCCAAGTAGATTAGTTTATACCAAATGGGATAAGAGCTGTTTTAAGGATTTCCTTGCAGTTATAGGGAGAGACTTCACCTTTTGCACCTCCCATTCATGGACGATGCTCTATTCTTTTGTTATAGTGATGTAACTTTGTTAATTTGAATAGGTTACCTTCCTTCTTTGAAGCGATGTCGAGTCTCAAGATTAATATAAGGAACTCCATTATGGGTATTAACTGTGAATCATGATCGCTCTAAGTTGAATACTTGGGCATCTTTAGTGGGTTCACGATGTTCTGTTTGCTGATTGCTTTTTCTATGAGATATTGGCTATGATGTTCACGATGTTCTGTTTGCTGATTGATTGTGGGTTTATTTTTTATGGCAGTTATTTCACACCTGACACTTATGCAAATAAGCATTCAGCACAGGCTGCTAGGCTTGCAGCCGGTTTATGTGCTGATCTTGCTTCAGAAGTTTTTTCTGGTCGTGCCAAAAATGGTTTTGCTCTGGTATGAAAGTTAACATGCTCGAATCCCCAAGTTTATTTCATTGTTATTAAAAGAAAAAGGATTTTTTTGTAATGCTCCTTTATAATGTTGTCTGACTGTGTTTTAAATCTCAGGTTCGTCCTCCTGGTCACCATGCAGGTGTTAAACAAGCCATGGGGTTTTGCCTCCATAACAATGCGGCAGTATCTGCATTGGCAGCTCAGGCTGCTGGTGCTAAGAAGGTTTTAATAGTTGATTGGGTAAGGTCAATGTTTTTCTCCCAAGTTGTAGGGCCTACAACTGGTTTTAATTCTCTCTCACAATTTTTTTTCTCTCTCTCTCTCTATTCATTCTAATTCTATCTACTTTAGGATGTTCATCATGGAAATGGAACACAGGAAATATTTGAGCAAAATAAATCGGTATGCTCTTTATGAATAGAACTTCTCTACCTTGTGGTTTACCTTCCTTTTCTGATCTCTTATTTGCAAAAGATGGAAAAATTTGCTTGACAAGATGATTTCACTGTTGTAAGTTTTAATCACAAGCCTGTATTGGGGTTCATGAATATATCTATTATATTAATGTCTGGAACATTCTTGTGATGAATTGGGACCTTTTCAAAACTGCTTAATTTATTACTGTAGGTTTTCTAACATGCATTTACTTGAGTTTTCTTCTACTGTTTCACATATTTGTACAAACAGAGGTTATCTTTGTGATTTTCCTTCTAGTCATTTCAGGACTTTGTACAGTTTCAATAACAATTTTGACCCAATTTTGTAGGTCTTGTATATATCTTTACATAGGCATGAATTCGGTAGATTCTATCCTGGAACTGGAGCTGCTGATGAGGTAACTGGTTATCTTTTAAAATCCTGCACCTCACTTTATCGTGTGGGCTAAGTTAACCATGTGGTTTTCATCCCTATCATTTGTGGCCTGGATACTTTTTCTAGCAATGAAGAATTGCAAACATAGTTTATATTTCTTTGTTGGAGTGCATTAGTTTATATTTCTTTGTTGGAGTGCATGGAAAGATGAGCTTATTATGTGCTAGGGTTGTTGATCCTTTGTTCCAATCTATTTTTACTAGGACTATTGTTATCAGTGTTTATGGCAAGAGAGAAATCATGATTTTTCAAGGAAACCGTTTAGATTGCGCAGAGGATGGGCCTAGCAAGTGTTTGATACATATCCAATTTGTCCCAAAAGAAAAAAAAGTTTAAACACTTTAGCTCAAGTGACATAATCGTTCAACTTATGTTTGCAAGTGCATAACACCTAATTATCTATCTGTTGTGTTTAACATATTTGACATTTTTAACAAGTTTCCTATATGTGTTCAACTAGTATTGGAGTGTTGGTTTTGTACATGGACGTGCAGTGTCCGAGTTTTAAGCATATCTGCTAAAAAATTAACTAGTGAAATTGGAATGAAATGACAATATTCTATCTGTCCAATTTTTTAGTAACACATTGTTTATTTTTATTTTCATTTTTTATCTAGCAAAGAGTTGGATAATAATAGAGAATCATATTTATTACCATATAAATTTTATTTTATTTTTCTTTTTGGTTCTTTTACTTATATTGTATGTATAATTATAAATGACAATTGTTTCTCTGTGCCTTGCTTCACTGTATAACTTTTTTTCTTGTGCACTTTGGTCTCCAACCAACCAAAATGCTTGCTGCCTTGGAGTGGGCTTTCTACTGTGAGAACATTAATTATTTAAAACTATTCACTTCTTTAGGTTGGCACGATGGGAGCAGAAGGATATTGTGTGAATGTTCCTTGGAGTCAGTCGGGAGTTGGTGATAATGATTACATTTTTGCATTTAAGCAAGTTGTGCTTCCCATAGGTTATTTCCATTGCCTTTACTTGTTTAATCTTGTGTCAAAATATTTTCTGGATATAAAATGAAATAGTGTGGAACATTTTCTATCGCACCTAACAATAATCATCCCTTTAGAAAAGAACATTCCTATTACAGGGAGTGATAAATTGATGTTTGAATTGGGCCGTGTATATGATTTCCGATGATATGAATAGTTTTATCATTAATGCATTTATGGTGGCTATATTTTATCTCCAGATATTTCTCAATTTGATCATGTTTGCTCCCATCGGTTTTTAAGTTTGATATCTTAACTCCAATTGTTCACCTTTTCATTTTTTAATTTTCTATTTGTTTTTCTTTTAAGAAGAGCCATATGTATCGTACTCTGATTTATTACTCTGGGTTCCTCTCCAGTCCCCCCTAAATAATTAATTAGATAAATAAGTTGTTGCTTGTTTCTACATCACCTCATCAGAATATACATATATATATATTTTAAGTTGTTAAATGGTTTGATGACATTTTCTTGTATGACATAGGAATGTATCCTGAATCTTAATGATGGTATTTGAAAATTAATACTCCCTAAACAACATTTAAGAACCCGTTGAGGTTTGAGAAAAAGATATATAAGGTTCTTTACTTCCTTTAATAATCTTTTATTTCAGAAAATTGTTATTTTGAATATCATCCACTGGTTTCTTGTTGAAAGTGTTTCTCATGGACAGGAGATGAAAAATATTTGCGTAACTGCCTGCAAAAAAATTACCTTTTTGTTCAAAATTTCCAATCTTCCATTTGTTGATCCTGCACTATGTTATGGCTGTGTTGCCCCTCTGAATGTCGAGGGCCTCGTCTTTCAACTTGCCATTTGTCTGGCTTTCAAGAATGAAAGTAAAACCTGGTGTCTCAGTTTCAATTTTGGCCATGTTATCAAGAAATTTGGAAGAACACAGTATACTTTTTGGTGACAAGGAGAGAAACTCTCAAGACTTTTGGATTAGGGTCAAAATTAATGTTTTTCGATGGTTTTATTTTGTTACTAGAGGTTTTTTTTATAATCACCAACCTGTACGACTATACTTTTGATGATGGCTTAACGGAGAAGCTTTGTTGTTATATGGTTTGGCCTCTGGAACATATGCAATTCTCTTATTTGTTACTTCTTCTCATCGTTACAATTATCTTCATATTATTGAAAAAAAGGAAGAAAAGGTGAGAGATATTGAATTTGACCTTGTAATAATTCTCATTATAAGTCTATTTATGGGAATGAAGAGCACTATTTTTAAAAAATATCTAGAGCACTAATTTTAAGCTTTATTTTTCAAATGTTGAAGGTGCTGTCTAGTACTAATTTGAACTCCTCATTTCTGATATACTTTTATCTTGACTCATTGCAGCTTCTGCTTTTGCCCCTGATCTCACTATCATATCAGCAGGATTTGATGCTGCAAGGGGTGATCCATTGGGAATGTGTGATGTAAGGATTTTCTTATTGAATGATTGTTATATTATTGGGCAATTTTCTCTATTTTGATTCACAGTTTAAATTTCTTGAGTTCTGTTCTATCATGACTTCTGGTTCATATTAAACAACTTCGTTTTTCTTCTCAAATTCCAGGTAACTCCTGCTGGGTATGCACAGATGACTTACTTGTTGAATATCGTCTCCGGTGGGAAGTTGCTAGTTATTTTAGAAGGCGGGTCTGTTCCTCATTTCTTGATCCTTGTGGCTTGCGCTCAGAGTTGGTTAAATGTATTTTCTCCTGCCTAGTGCTAAGTTGATTGAGATTTCTGTTTGCAGCTATAATCTTCGTTCCATATCATCTTCAGCTACTGCAGTAATCAAGGTGCCTTTTCTAAACAATGGAAAAACGAAAACTGAAATTGAGCAGTATTTATTATTTTGTCTTAGAAGTTGCTAATATTTTCTTGTCTCTAATTCTTATCTCTAGTTAAGCTGAAGCATTATGTATGCTGCCTATTTCCATGCTTATATTTCAGGGTGCTTAGGATATAACTTATTCTACCTCATTAATTATTTACGTTTCTGTTGTGGCAATAAAAAAGGTATTGCTGGGAGAAAGTCCTGGATGCGATTTGGACGATCCTTTACCCTCCAGAGCTGGGATGAAAACTGTACTAGACGTGCTTGCGATTCAAAAGAATTTTTGGCCCGTGCTGGAATCTAGCTTTTCACAATTACAATCACAGTACGAGATATATACAACGCAAAGAAGTAAGGACTTTCTCTTCCTTTTGCTTGCATGTGCATTGCATGTAGGGGAAGATTGTTACGGTAATCGGTTTAACTAGGCTGGAGCTGAGGTAGATAACTTGAGTGATTGGATGTAAATTTGAAGTAAAGAACCATTTTAACCAAGTTTATCCTTTCCTTTGCCTTAGAAATTAATTTGGAATTTTGGGTAAAGAAAATTTATGGCTAATTCTCCAATTGAAGCAGAAAGCAGTGGTAGGAAGGATTAGAAAAGATTCCACCTTGCAACTTCTGTGGACATGGGTTTACCAATCACCAATATGATAATATGATTATTTGAGTTATGTCCTCTTTGGACTTTCCTTTCCGGGCTTTCCCTCAAGGTTTCTAAAACGCGTTTGCTAGGGCTTTTCCTCAAGGTTTTTAAAACGCATTTGCTAGGGGGAGGTTTCTACACCCTTATAAAGAATATTTCGTTTTTCTCTCCAACCATTGTGAGATCTCACAATCCACCTCCCTTCGAGGCCAAGCGTCCTTGCTGGCACTTGTTCCCCTCTCCAACCGATGTGGGATCTCACAATCCACCTCCTTTAGATCCCAGTGTCCTCATTGGCATTCGTTCCCCTCTCCAACCTACGTGGGATCTCATAATACGCCCTCCTTCGGAGCCCAGCGACCTCCTTGGCACTCGTTCCTCTCTCCAATTAATGTGGGATCTCAAAATACACCCCCCTTTTAGGGCTCAGGGTCCTCGCTGGTACTTGTTGCTCTCTCCAACCGATATGGGATCTCACAATCCACCCCCTTTTAGGACCCAGCGTCCTCGTTGGCACACCACCCGGTGTCCACTCCCTTTGCAGATATAACCCTCTAGTATTTTAGTTGTAGATATATTATGAGTTGAACTTAGGTTAGCAAATGTTATTAAAGTTATGAGTTTCTAGTTTTATTAGTGGTTGCATGTCTAGGATCAATTGTTCCGACCTCAAACATTTTGTGGCAGACACTTGTCTTGTCTTGTCTTGGTGGATCTTAAAGCTTTATGATCTCGTGCCTTCTCATATGCAGGAAAACCACGGAAGAAGAGAGGACGGGGTGTTGTGCCTCCATTATGTTGGCGATGGAGTCGGAAGAAGCTGTTGTATCATCTACTAAAAGGACAACTTCGTGTAAGAGGAAAGGGTTTCTAACGTATTATTTTGTGCTTTTCATTTTCATCAACACTTCCATTCCTCATAATTTTGTTAATCTCTGTATTCCCTTGAGTCTCAGGATTCCCTGGATATTTGTAGCTCTTGTTATTGTTTAGTGGCACATTTCTGACAGGAGTTGCCAGTTGAAAGCTTAGAATTTTTATGTACTGTTGGTTCACCAAATGCAACTTCACCCTTGTTATCTTTCTCCATCCCACTGTCCATTTTATAGGTGGATTAACTCATA

mRNA sequence

TAAAGTCAAAGGACTCGTTTGCAAAATGGGTCATTTTCTTTTTACCTCGATTTGCAACAATGGAAATGGATGGGCGACTCCCGCTGCCGTACTAGTGCTTTGGCCATGGAGCTGAAGCGACTCATCTTTGCTTAGCGCAGGCATAATGGTTTCAGAAATACTTCAACAGAGTCATCTAGTGGATGGGGAGGCTGAAGTAAATCTTCAGAAGCAAGGCAACGAACTCCCAAGTCAAATTTTGAATGGAAGACATGGAAAATCAGGCTCTGATAGAAGTAGTGTTAGACCTAGTTTAGATTATAACTGTGGAGATGATAATACTGGCATAGCTTCTTATAGGGATGTACCAAGCAGCGTAAATATAGATATTCAACCCGATACTTTACGTAAGAAGGCAAGGCAGCAGAGAGAAATGACATTCCAAGATATGTGTAACAACCTGGACATCTTTGAGGATGATGATGAGGATGACGACGATGATAGTGACTGGGAACCTTTACAGAAACTCAGGGAAATAATGAAGTGGTTCTGTACAAATTGTACCATGGCCAACCTCGATGTTGCCGTACATTGTGACTCATGTGGAGAACATAGAGAATCAGGAATATTGAAGCATGGGTTTTTTGCTCCTTCATTTTTACACGAATCAACTTTATTAGAGGCTGAGCTAGAAACGAGAACTGACAAAGGCATGGTTTCACAAGTATCAACGTCTAATAGTTCCACGGCAATAGGCTTTGATGAGAGAATGTTGCTGCATTCAGAAAACTTTACTTCCTGTTTGGTGGTGTTCTTGCTAGAGAAGGTTGAAATGAAGTCACACCCGCACCCAGAAAGACCAGATCGTCTGAGAGCTATTGCTGCTAGCTTGGCTACAGCTGGAATTTTTCCTGGAAGATGCTATCCTATCCCAGCGAGAGAAATTACCAAAGAAGAACTTGAGATGGTTCACTCCGCGGAGAATATTCAAGCTGTTGAGGTGTCGAGCAATGTTATTTCTTGTTATTTCACACCTGACACTTATGCAAATAAGCATTCAGCACAGGCTGCTAGGCTTGCAGCCGGTTTATGTGCTGATCTTGCTTCAGAAGTTTTTTCTGGTCGTGCCAAAAATGGTTTTGCTCTGGTTCGTCCTCCTGGTCACCATGCAGGTGTTAAACAAGCCATGGGGTTTTGCCTCCATAACAATGCGGCAGTATCTGCATTGGCAGCTCAGGCTGCTGGTGCTAAGAAGGTTTTAATAGTTGATTGGGATGTTCATCATGGAAATGGAACACAGGAAATATTTGAGCAAAATAAATCGGTCTTGTATATATCTTTACATAGGCATGAATTCGGTAGATTCTATCCTGGAACTGGAGCTGCTGATGAGGTTGGCACGATGGGAGCAGAAGGATATTGTGTGAATGTTCCTTGGAGTCAGTCGGGAGTTGGTGATAATGATTACATTTTTGCATTTAAGCAAGTTGTGCTTCCCATAGCTTCTGCTTTTGCCCCTGATCTCACTATCATATCAGCAGGATTTGATGCTGCAAGGGGTGATCCATTGGGAATGTGTGATGTAACTCCTGCTGGGTATGCACAGATGACTTACTTGTTGAATATCGTCTCCGGTGGGAAGTTGCTAGTTATTTTAGAAGGCGGCTATAATCTTCGTTCCATATCATCTTCAGCTACTGCAGTAATCAAGGTATTGCTGGGAGAAAGTCCTGGATGCGATTTGGACGATCCTTTACCCTCCAGAGCTGGGATGAAAACTGTACTAGACGTGCTTGCGATTCAAAAGAATTTTTGGCCCGTGCTGGAATCTAGCTTTTCACAATTACAATCACAGTACGAGATATATACAACGCAAAGAAGAAAACCACGGAAGAAGAGAGGACGGGGTGTTGTGCCTCCATTATGTTGGCGATGGAGTCGGAAGAAGCTGTTGTATCATCTACTAAAAGGACAACTTCGTGTAAGAGGAAAGGGTTTCTAACGTATTATTTTGTGCTTTTCATTTTCATCAACACTTCCATTCCTCATAATTTTGTTAATCTCTGTATTCCCTTGAGTCTCAGGATTCCCTGGATATTTGTAGCTCTTGTTATTGTTTAGTGGCACATTTCTGACAGGAGTTGCCAGTTGAAAGCTTAGAATTTTTATGTACTGTTGGTTCACCAAATGCAACTTCACCCTTGTTATCTTTCTCCATCCCACTGTCCATTTTATAGGTGGATTAACTCATA

Coding sequence (CDS)

ATGGTTTCAGAAATACTTCAACAGAGTCATCTAGTGGATGGGGAGGCTGAAGTAAATCTTCAGAAGCAAGGCAACGAACTCCCAAGTCAAATTTTGAATGGAAGACATGGAAAATCAGGCTCTGATAGAAGTAGTGTTAGACCTAGTTTAGATTATAACTGTGGAGATGATAATACTGGCATAGCTTCTTATAGGGATGTACCAAGCAGCGTAAATATAGATATTCAACCCGATACTTTACGTAAGAAGGCAAGGCAGCAGAGAGAAATGACATTCCAAGATATGTGTAACAACCTGGACATCTTTGAGGATGATGATGAGGATGACGACGATGATAGTGACTGGGAACCTTTACAGAAACTCAGGGAAATAATGAAGTGGTTCTGTACAAATTGTACCATGGCCAACCTCGATGTTGCCGTACATTGTGACTCATGTGGAGAACATAGAGAATCAGGAATATTGAAGCATGGGTTTTTTGCTCCTTCATTTTTACACGAATCAACTTTATTAGAGGCTGAGCTAGAAACGAGAACTGACAAAGGCATGGTTTCACAAGTATCAACGTCTAATAGTTCCACGGCAATAGGCTTTGATGAGAGAATGTTGCTGCATTCAGAAAACTTTACTTCCTGTTTGGTGGTGTTCTTGCTAGAGAAGGTTGAAATGAAGTCACACCCGCACCCAGAAAGACCAGATCGTCTGAGAGCTATTGCTGCTAGCTTGGCTACAGCTGGAATTTTTCCTGGAAGATGCTATCCTATCCCAGCGAGAGAAATTACCAAAGAAGAACTTGAGATGGTTCACTCCGCGGAGAATATTCAAGCTGTTGAGGTGTCGAGCAATGTTATTTCTTGTTATTTCACACCTGACACTTATGCAAATAAGCATTCAGCACAGGCTGCTAGGCTTGCAGCCGGTTTATGTGCTGATCTTGCTTCAGAAGTTTTTTCTGGTCGTGCCAAAAATGGTTTTGCTCTGGTTCGTCCTCCTGGTCACCATGCAGGTGTTAAACAAGCCATGGGGTTTTGCCTCCATAACAATGCGGCAGTATCTGCATTGGCAGCTCAGGCTGCTGGTGCTAAGAAGGTTTTAATAGTTGATTGGGATGTTCATCATGGAAATGGAACACAGGAAATATTTGAGCAAAATAAATCGGTCTTGTATATATCTTTACATAGGCATGAATTCGGTAGATTCTATCCTGGAACTGGAGCTGCTGATGAGGTTGGCACGATGGGAGCAGAAGGATATTGTGTGAATGTTCCTTGGAGTCAGTCGGGAGTTGGTGATAATGATTACATTTTTGCATTTAAGCAAGTTGTGCTTCCCATAGCTTCTGCTTTTGCCCCTGATCTCACTATCATATCAGCAGGATTTGATGCTGCAAGGGGTGATCCATTGGGAATGTGTGATGTAACTCCTGCTGGGTATGCACAGATGACTTACTTGTTGAATATCGTCTCCGGTGGGAAGTTGCTAGTTATTTTAGAAGGCGGCTATAATCTTCGTTCCATATCATCTTCAGCTACTGCAGTAATCAAGGTATTGCTGGGAGAAAGTCCTGGATGCGATTTGGACGATCCTTTACCCTCCAGAGCTGGGATGAAAACTGTACTAGACGTGCTTGCGATTCAAAAGAATTTTTGGCCCGTGCTGGAATCTAGCTTTTCACAATTACAATCACAGTACGAGATATATACAACGCAAAGAAGAAAACCACGGAAGAAGAGAGGACGGGGTGTTGTGCCTCCATTATGTTGGCGATGGAGTCGGAAGAAGCTGTTGTATCATCTACTAAAAGGACAACTTCGTGTAAGAGGAAAGGGTTTCTAA

Protein sequence

MVSEILQQSHLVDGEAEVNLQKQGNELPSQILNGRHGKSGSDRSSVRPSLDYNCGDDNTGIASYRDVPSSVNIDIQPDTLRKKARQQREMTFQDMCNNLDIFEDDDEDDDDDSDWEPLQKLREIMKWFCTNCTMANLDVAVHCDSCGEHRESGILKHGFFAPSFLHESTLLEAELETRTDKGMVSQVSTSNSSTAIGFDERMLLHSENFTSCLVVFLLEKVEMKSHPHPERPDRLRAIAASLATAGIFPGRCYPIPAREITKEELEMVHSAENIQAVEVSSNVISCYFTPDTYANKHSAQAARLAAGLCADLASEVFSGRAKNGFALVRPPGHHAGVKQAMGFCLHNNAAVSALAAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEFGRFYPGTGAADEVGTMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFAPDLTIISAGFDAARGDPLGMCDVTPAGYAQMTYLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDLDDPLPSRAGMKTVLDVLAIQKNFWPVLESSFSQLQSQYEIYTTQRRKPRKKRGRGVVPPLCWRWSRKKLLYHLLKGQLRVRGKGF

Homology

[Close]

BLAST of Cp4.1LG04g12460 vs. ExPASy Swiss-Prot
Match: Q8GXJ1 (Histone deacetylase 15 OS=Arabidopsis thaliana OX=3702 GN=HDA15 PE=1 SV=2)

HSP 1 Score: 679.9 bits (1753), Expect = 2.7e-194
Identity = 348/542 (64.21%), Postives = 417/542 (76.94%), Query Frame = 0


Query: 69  SSVNIDIQPDTLRKKARQQREMTFQDMCNNLDIFEDDDEDDDDDSDWEPLQKLREIMKWF 128
           S+ +I++ P    K+AR  REMTF+D+    D   +DD+D+DDD DWEP+Q   E +KW 
Sbjct: 33  SNGDINVAPGVSAKRARVSREMTFEDI-YGADALLNDDDDEDDDCDWEPVQAPMEFVKWC 92

Query: 129 CTNCTMANLDVAVHCDSCGEHRESGILKHGFFAPSFLHESTLLEAELETRTDKGMVSQVS 188
           C NCTM+N    VHC  CGEH+ESGIL+HG+ A  F  ++ L+E E +           S
Sbjct: 93  CVNCTMSNPGDMVHCCICGEHKESGILRHGYLASPFFKDTGLIEVEEK-------YGGSS 152

Query: 189 TSNSSTAIGFDERMLLHSENFTSCLVVFLLEKVEMKSHPHPERPDRLRAIAASLATAGIF 248
           ++ SSTA+GFDERMLLHSE              E+K+ PHPERPDRLRAIAASLATAG+F
Sbjct: 153 SATSSTAVGFDERMLLHSE-------------FEVKAQPHPERPDRLRAIAASLATAGVF 212

Query: 249 PGRCYPIPAREITKEELEMVHSAENIQAVEVSSNVISCYFTPDTYANKHSAQAARLAAGL 308
           PGRC PI AREITK+EL+MVH++E++ AV+ +S ++  YFT DTYAN++SA+AARLAAGL
Sbjct: 213 PGRCLPINAREITKQELQMVHTSEHVDAVDTTSQLLYSYFTSDTYANEYSARAARLAAGL 272

Query: 309 CADLASEVFSGRAKNGFALVRPPGHHAGVKQAMGFCLHNNAAVSALAAQAAGAKKVLIVD 368
           CADLA+++F+GR KNGFALVRPPGHHAGV+ AMGFCLHNNAAV+AL AQAAGAKKVLIVD
Sbjct: 273 CADLATDIFTGRVKNGFALVRPPGHHAGVRHAMGFCLHNNAAVAALVAQAAGAKKVLIVD 332

Query: 369 WDVHHGNGTQEIFEQNKSVLYISLHRHEFGRFYPGTGAADEVGTMGAEGYCVNVPWSQSG 428
           WDVHHGNGTQEIFEQNKSVLYISLHRHE G FYPGTGAADEVG+ G EGYCVNVPWS  G
Sbjct: 333 WDVHHGNGTQEIFEQNKSVLYISLHRHEGGNFYPGTGAADEVGSNGGEGYCVNVPWSCGG 392

Query: 429 VGDNDYIFAFKQVVLPIASAFAPDLTIISAGFDAARGDPLGMCDVTPAGYAQMTYLLNIV 488
           VGD DYIFAF+ VVLPIASAF+PD  IISAGFDAARGDPLG CDVTPAGY++MT +L  +
Sbjct: 393 VGDKDYIFAFQHVVLPIASAFSPDFVIISAGFDAARGDPLGCCDVTPAGYSRMTQMLGDL 452

Query: 489 SGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDLD-DPLPSRAGMKTVLDVLAIQK 548
            GGK+LVILEGGYNLRSIS+SATAVIKVLLGE+P  +L     PS AG++TVLDVL IQ 
Sbjct: 453 CGGKMLVILEGGYNLRSISASATAVIKVLLGENPENELPIATTPSVAGLQTVLDVLNIQL 512

Query: 549 NFWPVLESSFSQLQSQYEIYTTQRRKPRKKRGRGVVPPLCWRWSRKKLLYHLLKGQLRVR 608
            FWP L  S+S+L S+ E    + +K + KR + V  P  W+W RKKLLY+ L  ++  R
Sbjct: 513 EFWPSLAISYSKLLSELEARLIENKKNQMKR-KVVRVPTWWKWGRKKLLYNFLSARMISR 552

Query: 609 GK 610
            K
Sbjct: 573 SK 552

[Close]

BLAST of Cp4.1LG04g12460 vs. ExPASy Swiss-Prot
Match: Q5A960 (Histone deacetylase HDA1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=HDA1 PE=1 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 2.2e-74
Identity = 161/384 (41.93%), Postives = 221/384 (57.55%), Query Frame = 0


Query: 194 TAIGFDERMLLHSENFTSCLVVFLLEKVEMKSHPHPERPDRLRAIAASLATAGIF--PGR 253
           T + +D RM  H++ FTS       E ++    PHPE P R+  I   L  AGI   P  
Sbjct: 119 TGLVYDVRMRYHAKVFTS-----YSEYID----PHPEDPRRIYRIYKKLVEAGIVLDPSL 178

Query: 254 C---------YPIPAREITKEELEMVHSAENIQAVEVSSNVISCYFTPDT------YANK 313
                       IP RE T EE+  VHS ++++ ++ + ++       +T      Y N 
Sbjct: 179 AGINEIGPFMLKIPIREATSEEILQVHSEDHLKFIQSTEDMSRDQLLKETETGDSIYVNN 238

Query: 314 HSAQAARLAAGLCADLASEVFSGRAKNGFALVRPPGHHAGVKQAMGFCLHNNAAVSA--- 373
            S  +A+L+ G   +    V  GR KN  A+VRPPGHHA      GFCL +N AV+A   
Sbjct: 239 DSYLSAKLSCGGTIEACKAVIEGRVKNSLAIVRPPGHHAEPNTPAGFCLFSNVAVAAKNM 298

Query: 374 LAAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEFGRFYPGT--GAADEVG 433
           L       ++++IVDWD+HHGNGTQ+ F  +  VLYISLHR E G+FYPGT  G  ++VG
Sbjct: 299 LKNYPESVRRIVIVDWDIHHGNGTQKAFYNDPRVLYISLHRFENGKFYPGTKYGDLNQVG 358

Query: 434 TMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFAPDLTIISAGFDAARGDPLGMC 493
               EG+ +N+PW  SG+ D DY++AF +++ P+ S F PDL I+S+GFDAA GD +G C
Sbjct: 359 EGPGEGFTINIPWRSSGMHDGDYVYAFNKIIQPVISEFDPDLIIVSSGFDAADGDVIGAC 418

Query: 494 DVTPAGYAQMTYLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDLDDPLP 553
            VTPAGY  MT+ L  ++ GKL VILEGGYNL SIS SA AV KVL+GE P   +    P
Sbjct: 419 HVTPAGYGYMTHTLKGIARGKLAVILEGGYNLDSISKSALAVAKVLVGEPPENTI-TLRP 478

Query: 554 SRAGMKTVLDVLAIQKNFWPVLES 556
               ++ V +V+ IQ  ++  L +
Sbjct: 479 QAEAIEVVDEVIKIQSKYFKSLRN 492

[Close]

BLAST of Cp4.1LG04g12460 vs. ExPASy Swiss-Prot
Match: P53973 (Histone deacetylase HDA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=HDA1 PE=1 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 5.9e-72
Identity = 157/389 (40.36%), Postives = 221/389 (56.81%), Query Frame = 0


Query: 186 QVSTSNSSTAIGFDERMLLHSENFTSCLVVFLLEKVEMKSHPHPERPDRLRAIAASLATA 245
           ++  S   T + +D RM  H++ FTS       E ++    PHPE P R+  I   LA  
Sbjct: 50  KIHYSPLKTGLCYDVRMRYHAKIFTS-----YFEYID----PHPEDPRRIYRIYKILAEN 109

Query: 246 GI-----------FPGRCYPIPAREITKEELEMVHSAENIQAVEVSSNVISCYFTPDT-- 305
           G+                  IP R  T EE+  VH+ E+++ +E +  +       +T  
Sbjct: 110 GLINDPTLSGVDDLGDLMLKIPVRAATSEEILEVHTKEHLEFIESTEKMSREELLKETEK 169

Query: 306 ----YANKHSAQAARLAAGLCADLASEVFSGRAKNGFALVRPPGHHAGVKQAMGFCLHNN 365
               Y N  S  +ARL  G   +    V  GR KN  A+VRPPGHHA  + A GFCL +N
Sbjct: 170 GDSVYFNNDSYASARLPCGGAIEACKAVVEGRVKNSLAVVRPPGHHAEPQAAGGFCLFSN 229

Query: 366 AAVSA---LAAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEFGRFYPGT- 425
            AV+A   L       ++++I+DWD+HHGNGTQ+ F Q+  VLY+SLHR E G++YPGT 
Sbjct: 230 VAVAAKNILKNYPESVRRIMILDWDIHHGNGTQKSFYQDDQVLYVSLHRFEMGKYYPGTI 289

Query: 426 -GAADEVGTMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFAPDLTIISAGFDAA 485
            G  D+ G    EG+  N+ W   GVGD +Y++AF+QVV+P+   F PDL IIS+GFDAA
Sbjct: 290 QGQYDQTGEGKGEGFNCNITWPVGGVGDAEYMWAFEQVVMPMGREFKPDLVIISSGFDAA 349

Query: 486 RGDPLGMCDVTPAGYAQMTYLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPG 545
            GD +G C VTP+ Y  MT++L  ++ G L V+LEGGYNL +I+ SA +V KVL+GE P 
Sbjct: 350 DGDTIGQCHVTPSCYGHMTHMLKSLARGNLCVVLEGGYNLDAIARSALSVAKVLIGEPPD 409

Query: 546 CDLDDPL--PSRAGMKTVLDVLAIQKNFW 551
            +L DPL  P    ++ +  V+ +Q  +W
Sbjct: 410 -ELPDPLSDPKPEVIEMIDKVIRLQSKYW 428

[Close]

BLAST of Cp4.1LG04g12460 vs. ExPASy Swiss-Prot
Match: P56523 (Histone deacetylase clr3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=clr3 PE=1 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.2e-70
Identity = 155/340 (45.59%), Postives = 198/340 (58.24%), Query Frame = 0


Query: 228 HPERPDRLRAIAASLATAGIFPGRCYP------IPAREITKEELEMVHSAE------NIQ 287
           HPE P R+  +  ++  AG       P      IPARE T EEL  VHS E      N +
Sbjct: 77  HPEDPRRVLRVFEAIKKAGYVSNVPSPSDVFLRIPAREATLEELLQVHSQEMYDRVTNTE 136

Query: 288 AVEVSSNVISCYFTPDTYANKHSAQAARLAAGLCADLASEVFSGRAKNGFALVRPPGHHA 347
            +           +   Y N  SA  ARLA G   +  + V +G+ KN FA+VRPPGHHA
Sbjct: 137 KMSHEDLANLEKISDSLYYNNESAFCARLACGSAIETCTAVVTGQVKNAFAVVRPPGHHA 196

Query: 348 GVKQAMGFCLHNNAAVSA---LAAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISL 407
              +  GFCL NN +V+A   L       K+VLIVDWD+HHGNGTQ  F  + +VLY+SL
Sbjct: 197 EPHKPGGFCLFNNVSVTARSMLQRFPDKIKRVLIVDWDIHHGNGTQMAFYDDPNVLYVSL 256

Query: 408 HRHEFGRFYPGT--GAADEVGTMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFA 467
           HR+E GRFYPGT  G A+  G     G  VN+PWS +G+GD DYI+AF++VV+P+A  F 
Sbjct: 257 HRYENGRFYPGTNYGCAENCGEGPGLGRTVNIPWSCAGMGDGDYIYAFQRVVMPVAYEFD 316

Query: 468 PDLTIISAGFDAARGDPLGMCDVTPAGYAQMTYLLNIVSGGKLLVILEGGYNLRSISSSA 527
           PDL I+S GFDAA GD +G   +TPA YA MT +L  ++ GK+ + LEGGYNL SIS+SA
Sbjct: 317 PDLVIVSCGFDAAAGDHIGQFLLTPAAYAHMTQMLMGLADGKVFISLEGGYNLDSISTSA 376

Query: 528 TAVIKVLLGESPGCDLDDPLPSRAGMKTVLDVLAIQKNFW 551
            AV + LLG  PG  L         + T+  V  IQ  +W
Sbjct: 377 LAVAQSLLGIPPG-RLHTTYACPQAVATINHVTKIQSQYW 415

[Close]

BLAST of Cp4.1LG04g12460 vs. ExPASy Swiss-Prot
Match: Q613L4 (Histone deacetylase 4 OS=Caenorhabditis briggsae OX=6238 GN=hda-4 PE=3 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.6e-69
Identity = 153/391 (39.13%), Postives = 223/391 (57.03%), Query Frame = 0


Query: 193 STAIGFDERMLLHSENFTSCLVVFLLEKVEMKSHPHPERPDRLRAIAASLATAGIFPGRC 252
           ST +G+D  M  H             E V   +  H E  +R++ I + L   G    +C
Sbjct: 481 STGLGYDPLMARH-------------ECVCSNNSNHVENGERIQRIWSKLTEEG-HVAKC 540

Query: 253 YPIPAREITKEELEMVHS--------AENIQAVEVSSNVI-----------SCYFTPDTY 312
             I A++ + E+L+MVHS              +++ +N +                 DTY
Sbjct: 541 ERITAKKASLEQLQMVHSQTYTTFFAVSPTACLKIDANALPLKRFLQLPCGGIGIDSDTY 600

Query: 313 ANKHSAQ-AARLAAGLCADLASEVFSGRAKNGFALVRPPGHHAGVKQAMGFCLHNNAAVS 372
            N  S Q AARLAAG   +L+S+V  GR KNGFA +RPPGHHA  +QA+GFC  NN AV+
Sbjct: 601 FNDASTQIAARLAAGTLIELSSQVAEGRLKNGFACIRPPGHHAEAEQALGFCFFNNVAVT 660

Query: 373 ALAAQA---AGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEFGRFYPGTGAADE 432
           A   QA       K+ I+DWDVHHGNGTQ  F+ + +VLY+SLHRH+ G F+PGTG+  E
Sbjct: 661 AKVLQAKYPVQCAKIAIIDWDVHHGNGTQLSFDDDPNVLYMSLHRHDNGNFFPGTGSVTE 720

Query: 433 VGTMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFAPDLTIISAGFDAARG--DP 492
           +G    +G+ VN+P+S   + D +Y+ A++ VV P+ ++F PD  ++SAGFDA  G  + 
Sbjct: 721 IGKGAGKGFSVNIPFSGGVMKDAEYLAAWRTVVEPVLASFCPDFILVSAGFDACHGHVNA 780

Query: 493 LGMCDVTPAGYAQMTYLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGC--- 552
           LG  ++TP  +  MT  L   + GK+++ LEGGYNL SIS++A   ++ L+GES      
Sbjct: 781 LGGYEITPEMFGYMTKCLLSYANGKVVLALEGGYNLDSISAAAEQCVQALIGESDDAGRL 840

Query: 553 --DLDDPLPSRAGMKTVLDVLAIQKNFWPVL 554
             D  + LP+++ ++T+  V+AI K FWP L
Sbjct: 841 CTDSLENLPNQSALETLQKVIAIHKGFWPAL 857

[Close]

BLAST of Cp4.1LG04g12460 vs. NCBI nr
Match: KAG7022142.1 (Histone deacetylase 15 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1212 bits (3135), Expect = 0.0
Identity = 609/615 (99.02%), Postives = 610/615 (99.19%), Query Frame = 0


Query: 1   MVSEILQQSHLVDGEAEVNLQKQGNELPSQILNGRHGKSGSDRSSVRPSLDYNCGDDNTG 60
           MVSEILQQSHLVDGEAEVNLQKQGNELPSQILNGRHGKSGSDRSSVRPSLDYNCGDDNTG
Sbjct: 1   MVSEILQQSHLVDGEAEVNLQKQGNELPSQILNGRHGKSGSDRSSVRPSLDYNCGDDNTG 60

Query: 61  IASYRDVPSSVNIDIQPDTLRKKARQQREMTFQDMCNNLDIFEDDDEDDDDDSDWEPLQK 120
           IASYRDVPSSVNIDIQPDTLRKKARQQREMTFQDMCNNLDIFEDDDEDDDDDSDWEPLQK
Sbjct: 61  IASYRDVPSSVNIDIQPDTLRKKARQQREMTFQDMCNNLDIFEDDDEDDDDDSDWEPLQK 120

Query: 121 LREIMKWFCTNCTMANLDVAVHCDSCGEHRESGILKHGFFAPSFLHESTLLEAELETRTD 180
           LREIMKWFCTNCTMANLDVAVHCDSCGEHRESGILKHGFFAPSFLHESTLLEAELETRTD
Sbjct: 121 LREIMKWFCTNCTMANLDVAVHCDSCGEHRESGILKHGFFAPSFLHESTLLEAELETRTD 180

Query: 181 KGMVSQVSTSNSSTAIGFDERMLLHSE----NFTSCLVVFLLEKVEMKSHPHPERPDRLR 240
           KGMVSQVST NSSTAIGFDERMLLHSE    NFTSCLVVFLLEKVEMKSHPHPERPDRLR
Sbjct: 181 KGMVSQVSTFNSSTAIGFDERMLLHSEVWEFNFTSCLVVFLLEKVEMKSHPHPERPDRLR 240

Query: 241 AIAASLATAGIFPGRCYPIPAREITKEELEMVHSAENIQAVEVSSNVISCYFTPDTYANK 300
           AIAASLATAGIFPGRCYPIPAREITKEELEMVHSAENIQAVEVSSNVISCYFTPDTYANK
Sbjct: 241 AIAASLATAGIFPGRCYPIPAREITKEELEMVHSAENIQAVEVSSNVISCYFTPDTYANK 300

Query: 301 HSAQAARLAAGLCADLASEVFSGRAKNGFALVRPPGHHAGVKQAMGFCLHNNAAVSALAA 360
           HSAQAARLAAGLCADLASEVFSGRAKNGFALVRPPGHHAGVKQAMGFCLHNNAAVSALAA
Sbjct: 301 HSAQAARLAAGLCADLASEVFSGRAKNGFALVRPPGHHAGVKQAMGFCLHNNAAVSALAA 360

Query: 361 QAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEFGRFYPGTGAADEVGTMGAE 420
           QAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEFGRFYPGTGAADEVGTMGAE
Sbjct: 361 QAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEFGRFYPGTGAADEVGTMGAE 420

Query: 421 GYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFAPDLTIISAGFDAARGDPLGMCDVTPA 480
           GYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFAPDLTIISAGFDAARGDPLGMCDVTPA
Sbjct: 421 GYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFAPDLTIISAGFDAARGDPLGMCDVTPA 480

Query: 481 GYAQMTYLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDLDDPLPSRAGM 540
           GYAQMTYLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDLDDPLPSRAGM
Sbjct: 481 GYAQMTYLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDLDDPLPSRAGM 540

Query: 541 KTVLDVLAIQKNFWPVLESSFSQLQSQYEIYTTQRRKPRKKRGRGVVPPLCWRWSRKKLL 600
           KTVLDVLAIQKNFWPVLESSFSQLQSQYEIYTTQRRKPRKKRGRGVVPPLCWRWSRK+LL
Sbjct: 541 KTVLDVLAIQKNFWPVLESSFSQLQSQYEIYTTQRRKPRKKRGRGVVPPLCWRWSRKRLL 600

Query: 601 YHLLKGQLRVRGKGF 611
           YHLLKGQLRVRGKGF
Sbjct: 601 YHLLKGQLRVRGKGF 615

[Close]

BLAST of Cp4.1LG04g12460 vs. NCBI nr
Match: XP_023531085.1 (histone deacetylase 15 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023531086.1 histone deacetylase 15 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023531087.1 histone deacetylase 15 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1186 bits (3069), Expect = 0.0
Identity = 598/611 (97.87%), Postives = 598/611 (97.87%), Query Frame = 0


Query: 1   MVSEILQQSHLVDGEAEVNLQKQGNELPSQILNGRHGKSGSDRSSVRPSLDYNCGDDNTG 60
           MVSEILQQSHLVDGEAEVNLQKQGNELPSQILNGRHGKSGSDRSSVRPSLDYNCGDDNTG
Sbjct: 1   MVSEILQQSHLVDGEAEVNLQKQGNELPSQILNGRHGKSGSDRSSVRPSLDYNCGDDNTG 60

Query: 61  IASYRDVPSSVNIDIQPDTLRKKARQQREMTFQDMCNNLDIFEDDDEDDDDDSDWEPLQK 120
           IASYRDVPSSVNIDIQPDTLRKKARQQREMTFQDMCNNLDIFEDDDEDDDDDSDWEPLQK
Sbjct: 61  IASYRDVPSSVNIDIQPDTLRKKARQQREMTFQDMCNNLDIFEDDDEDDDDDSDWEPLQK 120

Query: 121 LREIMKWFCTNCTMANLDVAVHCDSCGEHRESGILKHGFFAPSFLHESTLLEAELETRTD 180
           LREIMKWFCTNCTMANLDVAVHCDSCGEHRESGILKHGFFAPSFLHESTLLEAELETRTD
Sbjct: 121 LREIMKWFCTNCTMANLDVAVHCDSCGEHRESGILKHGFFAPSFLHESTLLEAELETRTD 180

Query: 181 KGMVSQVSTSNSSTAIGFDERMLLHSENFTSCLVVFLLEKVEMKSHPHPERPDRLRAIAA 240
           KGMVSQVSTSNSSTAIGFDERMLLHSE             VEMKSHPHPERPDRLRAIAA
Sbjct: 181 KGMVSQVSTSNSSTAIGFDERMLLHSE-------------VEMKSHPHPERPDRLRAIAA 240

Query: 241 SLATAGIFPGRCYPIPAREITKEELEMVHSAENIQAVEVSSNVISCYFTPDTYANKHSAQ 300
           SLATAGIFPGRCYPIPAREITKEELEMVHSAENIQAVEVSSNVISCYFTPDTYANKHSAQ
Sbjct: 241 SLATAGIFPGRCYPIPAREITKEELEMVHSAENIQAVEVSSNVISCYFTPDTYANKHSAQ 300

Query: 301 AARLAAGLCADLASEVFSGRAKNGFALVRPPGHHAGVKQAMGFCLHNNAAVSALAAQAAG 360
           AARLAAGLCADLASEVFSGRAKNGFALVRPPGHHAGVKQAMGFCLHNNAAVSALAAQAAG
Sbjct: 301 AARLAAGLCADLASEVFSGRAKNGFALVRPPGHHAGVKQAMGFCLHNNAAVSALAAQAAG 360

Query: 361 AKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEFGRFYPGTGAADEVGTMGAEGYCV 420
           AKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEFGRFYPGTGAADEVGTMGAEGYCV
Sbjct: 361 AKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEFGRFYPGTGAADEVGTMGAEGYCV 420

Query: 421 NVPWSQSGVGDNDYIFAFKQVVLPIASAFAPDLTIISAGFDAARGDPLGMCDVTPAGYAQ 480
           NVPWSQSGVGDNDYIFAFKQVVLPIASAFAPDLTIISAGFDAARGDPLGMCDVTPAGYAQ
Sbjct: 421 NVPWSQSGVGDNDYIFAFKQVVLPIASAFAPDLTIISAGFDAARGDPLGMCDVTPAGYAQ 480

Query: 481 MTYLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDLDDPLPSRAGMKTVL 540
           MTYLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDLDDPLPSRAGMKTVL
Sbjct: 481 MTYLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDLDDPLPSRAGMKTVL 540

Query: 541 DVLAIQKNFWPVLESSFSQLQSQYEIYTTQRRKPRKKRGRGVVPPLCWRWSRKKLLYHLL 600
           DVLAIQKNFWPVLESSFSQLQSQYEIYTTQRRKPRKKRGRGVVPPLCWRWSRKKLLYHLL
Sbjct: 541 DVLAIQKNFWPVLESSFSQLQSQYEIYTTQRRKPRKKRGRGVVPPLCWRWSRKKLLYHLL 598

Query: 601 KGQLRVRGKGF 611
           KGQLRVRGKGF
Sbjct: 601 KGQLRVRGKGF 598

[Close]

BLAST of Cp4.1LG04g12460 vs. NCBI nr
Match: XP_022925300.1 (histone deacetylase 15 isoform X1 [Cucurbita moschata] >XP_022925301.1 histone deacetylase 15 isoform X1 [Cucurbita moschata] >XP_022925303.1 histone deacetylase 15 isoform X1 [Cucurbita moschata])

HSP 1 Score: 1181 bits (3055), Expect = 0.0
Identity = 595/611 (97.38%), Postives = 596/611 (97.55%), Query Frame = 0


Query: 1   MVSEILQQSHLVDGEAEVNLQKQGNELPSQILNGRHGKSGSDRSSVRPSLDYNCGDDNTG 60
           MVSEILQQSHLVDGEAEVNLQKQGNELPSQILNGRHGKSGSDRSSVRPSLDYNCGDDNTG
Sbjct: 1   MVSEILQQSHLVDGEAEVNLQKQGNELPSQILNGRHGKSGSDRSSVRPSLDYNCGDDNTG 60

Query: 61  IASYRDVPSSVNIDIQPDTLRKKARQQREMTFQDMCNNLDIFEDDDEDDDDDSDWEPLQK 120
           IASYRDVPSSVNIDIQPDTLRKKARQQREMTFQDMCNNLDIFEDDDEDDDDDSDWEPL K
Sbjct: 61  IASYRDVPSSVNIDIQPDTLRKKARQQREMTFQDMCNNLDIFEDDDEDDDDDSDWEPLHK 120

Query: 121 LREIMKWFCTNCTMANLDVAVHCDSCGEHRESGILKHGFFAPSFLHESTLLEAELETRTD 180
           LREIMKWFCTNCTMANLDVAVHCDSCGEHRESGILKHGFFAPSFLHESTLLEAELETRTD
Sbjct: 121 LREIMKWFCTNCTMANLDVAVHCDSCGEHRESGILKHGFFAPSFLHESTLLEAELETRTD 180

Query: 181 KGMVSQVSTSNSSTAIGFDERMLLHSENFTSCLVVFLLEKVEMKSHPHPERPDRLRAIAA 240
           KGMVSQVST NSSTAIGFDERMLLHSE             VEMKSHPHPERPDRLRAIAA
Sbjct: 181 KGMVSQVSTFNSSTAIGFDERMLLHSE-------------VEMKSHPHPERPDRLRAIAA 240

Query: 241 SLATAGIFPGRCYPIPAREITKEELEMVHSAENIQAVEVSSNVISCYFTPDTYANKHSAQ 300
           SLATAGIFPGRCYPIPAREITKEELEMVHSAENIQAVEVSSNVISCYFTPDTYANKHSAQ
Sbjct: 241 SLATAGIFPGRCYPIPAREITKEELEMVHSAENIQAVEVSSNVISCYFTPDTYANKHSAQ 300

Query: 301 AARLAAGLCADLASEVFSGRAKNGFALVRPPGHHAGVKQAMGFCLHNNAAVSALAAQAAG 360
           AARLAAGLCADLASEVFSGRAKNGFALVRPPGHHAGVKQAMGFCLHNNAAVSALAAQAAG
Sbjct: 301 AARLAAGLCADLASEVFSGRAKNGFALVRPPGHHAGVKQAMGFCLHNNAAVSALAAQAAG 360

Query: 361 AKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEFGRFYPGTGAADEVGTMGAEGYCV 420
           AKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEFGRFYPGTGAADEVGTMGAEGYCV
Sbjct: 361 AKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEFGRFYPGTGAADEVGTMGAEGYCV 420

Query: 421 NVPWSQSGVGDNDYIFAFKQVVLPIASAFAPDLTIISAGFDAARGDPLGMCDVTPAGYAQ 480
           NVPWSQSGVGDNDYIFAFKQVVLPIASAFAPDLTIISAGFDAARGDPLGMCDVTPAGYAQ
Sbjct: 421 NVPWSQSGVGDNDYIFAFKQVVLPIASAFAPDLTIISAGFDAARGDPLGMCDVTPAGYAQ 480

Query: 481 MTYLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDLDDPLPSRAGMKTVL 540
           MTYLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDLDDPLPSRAGMKTVL
Sbjct: 481 MTYLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDLDDPLPSRAGMKTVL 540

Query: 541 DVLAIQKNFWPVLESSFSQLQSQYEIYTTQRRKPRKKRGRGVVPPLCWRWSRKKLLYHLL 600
           DVLAIQKNFWPVLESSFSQLQSQYEIYTTQRRKPRKKRGRGVVPPLCWRWSRK+LLYHLL
Sbjct: 541 DVLAIQKNFWPVLESSFSQLQSQYEIYTTQRRKPRKKRGRGVVPPLCWRWSRKRLLYHLL 598

Query: 601 KGQLRVRGKGF 611
           KGQLRVRGKGF
Sbjct: 601 KGQLRVRGKGF 598

[Close]

BLAST of Cp4.1LG04g12460 vs. NCBI nr
Match: XP_023531088.1 (histone deacetylase 15 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1180 bits (3052), Expect = 0.0
Identity = 597/611 (97.71%), Postives = 597/611 (97.71%), Query Frame = 0


Query: 1   MVSEILQQSHLVDGEAEVNLQKQGNELPSQILNGRHGKSGSDRSSVRPSLDYNCGDDNTG 60
           MVSEILQQSHLVDGEAEVNLQKQGNELPSQILNGRHGKSGSDRSSVRPSLDYNCGDDNTG
Sbjct: 1   MVSEILQQSHLVDGEAEVNLQKQGNELPSQILNGRHGKSGSDRSSVRPSLDYNCGDDNTG 60

Query: 61  IASYRDVPSSVNIDIQPDTLRKKARQQREMTFQDMCNNLDIFEDDDEDDDDDSDWEPLQK 120
           IASYRDVPSSVNIDIQPDTLRK ARQQREMTFQDMCNNLDIFEDDDEDDDDDSDWEPLQK
Sbjct: 61  IASYRDVPSSVNIDIQPDTLRK-ARQQREMTFQDMCNNLDIFEDDDEDDDDDSDWEPLQK 120

Query: 121 LREIMKWFCTNCTMANLDVAVHCDSCGEHRESGILKHGFFAPSFLHESTLLEAELETRTD 180
           LREIMKWFCTNCTMANLDVAVHCDSCGEHRESGILKHGFFAPSFLHESTLLEAELETRTD
Sbjct: 121 LREIMKWFCTNCTMANLDVAVHCDSCGEHRESGILKHGFFAPSFLHESTLLEAELETRTD 180

Query: 181 KGMVSQVSTSNSSTAIGFDERMLLHSENFTSCLVVFLLEKVEMKSHPHPERPDRLRAIAA 240
           KGMVSQVSTSNSSTAIGFDERMLLHSE             VEMKSHPHPERPDRLRAIAA
Sbjct: 181 KGMVSQVSTSNSSTAIGFDERMLLHSE-------------VEMKSHPHPERPDRLRAIAA 240

Query: 241 SLATAGIFPGRCYPIPAREITKEELEMVHSAENIQAVEVSSNVISCYFTPDTYANKHSAQ 300
           SLATAGIFPGRCYPIPAREITKEELEMVHSAENIQAVEVSSNVISCYFTPDTYANKHSAQ
Sbjct: 241 SLATAGIFPGRCYPIPAREITKEELEMVHSAENIQAVEVSSNVISCYFTPDTYANKHSAQ 300

Query: 301 AARLAAGLCADLASEVFSGRAKNGFALVRPPGHHAGVKQAMGFCLHNNAAVSALAAQAAG 360
           AARLAAGLCADLASEVFSGRAKNGFALVRPPGHHAGVKQAMGFCLHNNAAVSALAAQAAG
Sbjct: 301 AARLAAGLCADLASEVFSGRAKNGFALVRPPGHHAGVKQAMGFCLHNNAAVSALAAQAAG 360

Query: 361 AKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEFGRFYPGTGAADEVGTMGAEGYCV 420
           AKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEFGRFYPGTGAADEVGTMGAEGYCV
Sbjct: 361 AKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEFGRFYPGTGAADEVGTMGAEGYCV 420

Query: 421 NVPWSQSGVGDNDYIFAFKQVVLPIASAFAPDLTIISAGFDAARGDPLGMCDVTPAGYAQ 480
           NVPWSQSGVGDNDYIFAFKQVVLPIASAFAPDLTIISAGFDAARGDPLGMCDVTPAGYAQ
Sbjct: 421 NVPWSQSGVGDNDYIFAFKQVVLPIASAFAPDLTIISAGFDAARGDPLGMCDVTPAGYAQ 480

Query: 481 MTYLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDLDDPLPSRAGMKTVL 540
           MTYLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDLDDPLPSRAGMKTVL
Sbjct: 481 MTYLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDLDDPLPSRAGMKTVL 540

Query: 541 DVLAIQKNFWPVLESSFSQLQSQYEIYTTQRRKPRKKRGRGVVPPLCWRWSRKKLLYHLL 600
           DVLAIQKNFWPVLESSFSQLQSQYEIYTTQRRKPRKKRGRGVVPPLCWRWSRKKLLYHLL
Sbjct: 541 DVLAIQKNFWPVLESSFSQLQSQYEIYTTQRRKPRKKRGRGVVPPLCWRWSRKKLLYHLL 597

Query: 601 KGQLRVRGKGF 611
           KGQLRVRGKGF
Sbjct: 601 KGQLRVRGKGF 597

[Close]

BLAST of Cp4.1LG04g12460 vs. NCBI nr
Match: XP_022925310.1 (histone deacetylase 15 isoform X2 [Cucurbita moschata])

HSP 1 Score: 1174 bits (3038), Expect = 0.0
Identity = 594/611 (97.22%), Postives = 595/611 (97.38%), Query Frame = 0


Query: 1   MVSEILQQSHLVDGEAEVNLQKQGNELPSQILNGRHGKSGSDRSSVRPSLDYNCGDDNTG 60
           MVSEILQQSHLVDGEAEVNLQKQGNELPSQILNGRHGKSGSDRSSVRPSLDYNCGDDNTG
Sbjct: 1   MVSEILQQSHLVDGEAEVNLQKQGNELPSQILNGRHGKSGSDRSSVRPSLDYNCGDDNTG 60

Query: 61  IASYRDVPSSVNIDIQPDTLRKKARQQREMTFQDMCNNLDIFEDDDEDDDDDSDWEPLQK 120
           IASYRDVPSSVNIDIQPDTLRK ARQQREMTFQDMCNNLDIFEDDDEDDDDDSDWEPL K
Sbjct: 61  IASYRDVPSSVNIDIQPDTLRK-ARQQREMTFQDMCNNLDIFEDDDEDDDDDSDWEPLHK 120

Query: 121 LREIMKWFCTNCTMANLDVAVHCDSCGEHRESGILKHGFFAPSFLHESTLLEAELETRTD 180
           LREIMKWFCTNCTMANLDVAVHCDSCGEHRESGILKHGFFAPSFLHESTLLEAELETRTD
Sbjct: 121 LREIMKWFCTNCTMANLDVAVHCDSCGEHRESGILKHGFFAPSFLHESTLLEAELETRTD 180

Query: 181 KGMVSQVSTSNSSTAIGFDERMLLHSENFTSCLVVFLLEKVEMKSHPHPERPDRLRAIAA 240
           KGMVSQVST NSSTAIGFDERMLLHSE             VEMKSHPHPERPDRLRAIAA
Sbjct: 181 KGMVSQVSTFNSSTAIGFDERMLLHSE-------------VEMKSHPHPERPDRLRAIAA 240

Query: 241 SLATAGIFPGRCYPIPAREITKEELEMVHSAENIQAVEVSSNVISCYFTPDTYANKHSAQ 300
           SLATAGIFPGRCYPIPAREITKEELEMVHSAENIQAVEVSSNVISCYFTPDTYANKHSAQ
Sbjct: 241 SLATAGIFPGRCYPIPAREITKEELEMVHSAENIQAVEVSSNVISCYFTPDTYANKHSAQ 300

Query: 301 AARLAAGLCADLASEVFSGRAKNGFALVRPPGHHAGVKQAMGFCLHNNAAVSALAAQAAG 360
           AARLAAGLCADLASEVFSGRAKNGFALVRPPGHHAGVKQAMGFCLHNNAAVSALAAQAAG
Sbjct: 301 AARLAAGLCADLASEVFSGRAKNGFALVRPPGHHAGVKQAMGFCLHNNAAVSALAAQAAG 360

Query: 361 AKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEFGRFYPGTGAADEVGTMGAEGYCV 420
           AKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEFGRFYPGTGAADEVGTMGAEGYCV
Sbjct: 361 AKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEFGRFYPGTGAADEVGTMGAEGYCV 420

Query: 421 NVPWSQSGVGDNDYIFAFKQVVLPIASAFAPDLTIISAGFDAARGDPLGMCDVTPAGYAQ 480
           NVPWSQSGVGDNDYIFAFKQVVLPIASAFAPDLTIISAGFDAARGDPLGMCDVTPAGYAQ
Sbjct: 421 NVPWSQSGVGDNDYIFAFKQVVLPIASAFAPDLTIISAGFDAARGDPLGMCDVTPAGYAQ 480

Query: 481 MTYLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDLDDPLPSRAGMKTVL 540
           MTYLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDLDDPLPSRAGMKTVL
Sbjct: 481 MTYLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDLDDPLPSRAGMKTVL 540

Query: 541 DVLAIQKNFWPVLESSFSQLQSQYEIYTTQRRKPRKKRGRGVVPPLCWRWSRKKLLYHLL 600
           DVLAIQKNFWPVLESSFSQLQSQYEIYTTQRRKPRKKRGRGVVPPLCWRWSRK+LLYHLL
Sbjct: 541 DVLAIQKNFWPVLESSFSQLQSQYEIYTTQRRKPRKKRGRGVVPPLCWRWSRKRLLYHLL 597

Query: 601 KGQLRVRGKGF 611
           KGQLRVRGKGF
Sbjct: 601 KGQLRVRGKGF 597

[Close]

BLAST of Cp4.1LG04g12460 vs. ExPASy TrEMBL
Match: A0A6J1EET5 (Histone deacetylase OS=Cucurbita moschata OX=3662 GN=LOC111432575 PE=4 SV=1)

HSP 1 Score: 1181 bits (3055), Expect = 0.0
Identity = 595/611 (97.38%), Postives = 596/611 (97.55%), Query Frame = 0


Query: 1   MVSEILQQSHLVDGEAEVNLQKQGNELPSQILNGRHGKSGSDRSSVRPSLDYNCGDDNTG 60
           MVSEILQQSHLVDGEAEVNLQKQGNELPSQILNGRHGKSGSDRSSVRPSLDYNCGDDNTG
Sbjct: 1   MVSEILQQSHLVDGEAEVNLQKQGNELPSQILNGRHGKSGSDRSSVRPSLDYNCGDDNTG 60

Query: 61  IASYRDVPSSVNIDIQPDTLRKKARQQREMTFQDMCNNLDIFEDDDEDDDDDSDWEPLQK 120
           IASYRDVPSSVNIDIQPDTLRKKARQQREMTFQDMCNNLDIFEDDDEDDDDDSDWEPL K
Sbjct: 61  IASYRDVPSSVNIDIQPDTLRKKARQQREMTFQDMCNNLDIFEDDDEDDDDDSDWEPLHK 120

Query: 121 LREIMKWFCTNCTMANLDVAVHCDSCGEHRESGILKHGFFAPSFLHESTLLEAELETRTD 180
           LREIMKWFCTNCTMANLDVAVHCDSCGEHRESGILKHGFFAPSFLHESTLLEAELETRTD
Sbjct: 121 LREIMKWFCTNCTMANLDVAVHCDSCGEHRESGILKHGFFAPSFLHESTLLEAELETRTD 180

Query: 181 KGMVSQVSTSNSSTAIGFDERMLLHSENFTSCLVVFLLEKVEMKSHPHPERPDRLRAIAA 240
           KGMVSQVST NSSTAIGFDERMLLHSE             VEMKSHPHPERPDRLRAIAA
Sbjct: 181 KGMVSQVSTFNSSTAIGFDERMLLHSE-------------VEMKSHPHPERPDRLRAIAA 240

Query: 241 SLATAGIFPGRCYPIPAREITKEELEMVHSAENIQAVEVSSNVISCYFTPDTYANKHSAQ 300
           SLATAGIFPGRCYPIPAREITKEELEMVHSAENIQAVEVSSNVISCYFTPDTYANKHSAQ
Sbjct: 241 SLATAGIFPGRCYPIPAREITKEELEMVHSAENIQAVEVSSNVISCYFTPDTYANKHSAQ 300

Query: 301 AARLAAGLCADLASEVFSGRAKNGFALVRPPGHHAGVKQAMGFCLHNNAAVSALAAQAAG 360
           AARLAAGLCADLASEVFSGRAKNGFALVRPPGHHAGVKQAMGFCLHNNAAVSALAAQAAG
Sbjct: 301 AARLAAGLCADLASEVFSGRAKNGFALVRPPGHHAGVKQAMGFCLHNNAAVSALAAQAAG 360

Query: 361 AKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEFGRFYPGTGAADEVGTMGAEGYCV 420
           AKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEFGRFYPGTGAADEVGTMGAEGYCV
Sbjct: 361 AKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEFGRFYPGTGAADEVGTMGAEGYCV 420

Query: 421 NVPWSQSGVGDNDYIFAFKQVVLPIASAFAPDLTIISAGFDAARGDPLGMCDVTPAGYAQ 480
           NVPWSQSGVGDNDYIFAFKQVVLPIASAFAPDLTIISAGFDAARGDPLGMCDVTPAGYAQ
Sbjct: 421 NVPWSQSGVGDNDYIFAFKQVVLPIASAFAPDLTIISAGFDAARGDPLGMCDVTPAGYAQ 480

Query: 481 MTYLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDLDDPLPSRAGMKTVL 540
           MTYLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDLDDPLPSRAGMKTVL
Sbjct: 481 MTYLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDLDDPLPSRAGMKTVL 540

Query: 541 DVLAIQKNFWPVLESSFSQLQSQYEIYTTQRRKPRKKRGRGVVPPLCWRWSRKKLLYHLL 600
           DVLAIQKNFWPVLESSFSQLQSQYEIYTTQRRKPRKKRGRGVVPPLCWRWSRK+LLYHLL
Sbjct: 541 DVLAIQKNFWPVLESSFSQLQSQYEIYTTQRRKPRKKRGRGVVPPLCWRWSRKRLLYHLL 598

Query: 601 KGQLRVRGKGF 611
           KGQLRVRGKGF
Sbjct: 601 KGQLRVRGKGF 598

[Close]

BLAST of Cp4.1LG04g12460 vs. ExPASy TrEMBL
Match: A0A6J1EHK5 (Histone deacetylase OS=Cucurbita moschata OX=3662 GN=LOC111432575 PE=4 SV=1)

HSP 1 Score: 1174 bits (3038), Expect = 0.0
Identity = 594/611 (97.22%), Postives = 595/611 (97.38%), Query Frame = 0


Query: 1   MVSEILQQSHLVDGEAEVNLQKQGNELPSQILNGRHGKSGSDRSSVRPSLDYNCGDDNTG 60
           MVSEILQQSHLVDGEAEVNLQKQGNELPSQILNGRHGKSGSDRSSVRPSLDYNCGDDNTG
Sbjct: 1   MVSEILQQSHLVDGEAEVNLQKQGNELPSQILNGRHGKSGSDRSSVRPSLDYNCGDDNTG 60

Query: 61  IASYRDVPSSVNIDIQPDTLRKKARQQREMTFQDMCNNLDIFEDDDEDDDDDSDWEPLQK 120
           IASYRDVPSSVNIDIQPDTLRK ARQQREMTFQDMCNNLDIFEDDDEDDDDDSDWEPL K
Sbjct: 61  IASYRDVPSSVNIDIQPDTLRK-ARQQREMTFQDMCNNLDIFEDDDEDDDDDSDWEPLHK 120

Query: 121 LREIMKWFCTNCTMANLDVAVHCDSCGEHRESGILKHGFFAPSFLHESTLLEAELETRTD 180
           LREIMKWFCTNCTMANLDVAVHCDSCGEHRESGILKHGFFAPSFLHESTLLEAELETRTD
Sbjct: 121 LREIMKWFCTNCTMANLDVAVHCDSCGEHRESGILKHGFFAPSFLHESTLLEAELETRTD 180

Query: 181 KGMVSQVSTSNSSTAIGFDERMLLHSENFTSCLVVFLLEKVEMKSHPHPERPDRLRAIAA 240
           KGMVSQVST NSSTAIGFDERMLLHSE             VEMKSHPHPERPDRLRAIAA
Sbjct: 181 KGMVSQVSTFNSSTAIGFDERMLLHSE-------------VEMKSHPHPERPDRLRAIAA 240

Query: 241 SLATAGIFPGRCYPIPAREITKEELEMVHSAENIQAVEVSSNVISCYFTPDTYANKHSAQ 300
           SLATAGIFPGRCYPIPAREITKEELEMVHSAENIQAVEVSSNVISCYFTPDTYANKHSAQ
Sbjct: 241 SLATAGIFPGRCYPIPAREITKEELEMVHSAENIQAVEVSSNVISCYFTPDTYANKHSAQ 300

Query: 301 AARLAAGLCADLASEVFSGRAKNGFALVRPPGHHAGVKQAMGFCLHNNAAVSALAAQAAG 360
           AARLAAGLCADLASEVFSGRAKNGFALVRPPGHHAGVKQAMGFCLHNNAAVSALAAQAAG
Sbjct: 301 AARLAAGLCADLASEVFSGRAKNGFALVRPPGHHAGVKQAMGFCLHNNAAVSALAAQAAG 360

Query: 361 AKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEFGRFYPGTGAADEVGTMGAEGYCV 420
           AKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEFGRFYPGTGAADEVGTMGAEGYCV
Sbjct: 361 AKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEFGRFYPGTGAADEVGTMGAEGYCV 420

Query: 421 NVPWSQSGVGDNDYIFAFKQVVLPIASAFAPDLTIISAGFDAARGDPLGMCDVTPAGYAQ 480
           NVPWSQSGVGDNDYIFAFKQVVLPIASAFAPDLTIISAGFDAARGDPLGMCDVTPAGYAQ
Sbjct: 421 NVPWSQSGVGDNDYIFAFKQVVLPIASAFAPDLTIISAGFDAARGDPLGMCDVTPAGYAQ 480

Query: 481 MTYLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDLDDPLPSRAGMKTVL 540
           MTYLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDLDDPLPSRAGMKTVL
Sbjct: 481 MTYLLNIVSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDLDDPLPSRAGMKTVL 540

Query: 541 DVLAIQKNFWPVLESSFSQLQSQYEIYTTQRRKPRKKRGRGVVPPLCWRWSRKKLLYHLL 600
           DVLAIQKNFWPVLESSFSQLQSQYEIYTTQRRKPRKKRGRGVVPPLCWRWSRK+LLYHLL
Sbjct: 541 DVLAIQKNFWPVLESSFSQLQSQYEIYTTQRRKPRKKRGRGVVPPLCWRWSRKRLLYHLL 597

Query: 601 KGQLRVRGKGF 611
           KGQLRVRGKGF
Sbjct: 601 KGQLRVRGKGF 597

[Close]

BLAST of Cp4.1LG04g12460 vs. ExPASy TrEMBL
Match: A0A6J1IF17 (Histone deacetylase OS=Cucurbita maxima OX=3661 GN=LOC111472641 PE=4 SV=1)

HSP 1 Score: 1160 bits (3000), Expect = 0.0
Identity = 582/600 (97.00%), Postives = 586/600 (97.67%), Query Frame = 0


Query: 12  VDGEAEVNLQKQGNELPSQILNGRHGKSGSDRSSVRPSLDYNCGDDNTGIASYRDVPSSV 71
           +DGEAEVNLQKQGNELPSQILNGRHGKSGSDR SVRPSLDYNCGDDNTGIASYRDVPSSV
Sbjct: 1   MDGEAEVNLQKQGNELPSQILNGRHGKSGSDRISVRPSLDYNCGDDNTGIASYRDVPSSV 60

Query: 72  NIDIQPDTLRKKARQQREMTFQDMCNNLDIFEDDDEDDDDDSDWEPLQKLREIMKWFCTN 131
           NIDIQPDTLRKKARQQREMTFQDMCNNLDIFEDDDEDDDDDSDWEPLQKLREIMKWFCTN
Sbjct: 61  NIDIQPDTLRKKARQQREMTFQDMCNNLDIFEDDDEDDDDDSDWEPLQKLREIMKWFCTN 120

Query: 132 CTMANLDVAVHCDSCGEHRESGILKHGFFAPSFLHESTLLEAELETRTDKGMVSQVSTSN 191
           CTMANLDVAVHCDSCGEHRESGILKHGFFAPSFLH+STLLEAELETRTDKGMVSQVSTSN
Sbjct: 121 CTMANLDVAVHCDSCGEHRESGILKHGFFAPSFLHKSTLLEAELETRTDKGMVSQVSTSN 180

Query: 192 SSTAIGFDERMLLHSENFTSCLVVFLLEKVEMKSHPHPERPDRLRAIAASLATAGIFPGR 251
           SSTAIGFDERMLLHSE             VEMKSHPHPERPDRLRAIAASLATAGIFPGR
Sbjct: 181 SSTAIGFDERMLLHSE-------------VEMKSHPHPERPDRLRAIAASLATAGIFPGR 240

Query: 252 CYPIPAREITKEELEMVHSAENIQAVEVSSNVISCYFTPDTYANKHSAQAARLAAGLCAD 311
           CYPIPAREITKEELEMVHSAENIQAVEVSSNVISCYFTPDTYANKHSAQAARLAAGLCAD
Sbjct: 241 CYPIPAREITKEELEMVHSAENIQAVEVSSNVISCYFTPDTYANKHSAQAARLAAGLCAD 300

Query: 312 LASEVFSGRAKNGFALVRPPGHHAGVKQAMGFCLHNNAAVSALAAQAAGAKKVLIVDWDV 371
           LASEVFSGRAKNGFALVRPPGHHAGVKQAMGFCLHNNAAVSALAAQAAGAKKVLIVDWDV
Sbjct: 301 LASEVFSGRAKNGFALVRPPGHHAGVKQAMGFCLHNNAAVSALAAQAAGAKKVLIVDWDV 360

Query: 372 HHGNGTQEIFEQNKSVLYISLHRHEFGRFYPGTGAADEVGTMGAEGYCVNVPWSQSGVGD 431
           HHGNGTQEIFEQNKSVLYISLHRHEFGRFYPGTGAADEVGTMGAEGYCVNVPWSQSGVGD
Sbjct: 361 HHGNGTQEIFEQNKSVLYISLHRHEFGRFYPGTGAADEVGTMGAEGYCVNVPWSQSGVGD 420

Query: 432 NDYIFAFKQVVLPIASAFAPDLTIISAGFDAARGDPLGMCDVTPAGYAQMTYLLNIVSGG 491
           NDYIFAFKQVVLPIASAFAPDLTIISAGFDAARGDPLGMCDVTPAGYAQMTYLLNIVSGG
Sbjct: 421 NDYIFAFKQVVLPIASAFAPDLTIISAGFDAARGDPLGMCDVTPAGYAQMTYLLNIVSGG 480

Query: 492 KLLVILEGGYNLRSISSSATAVIKVLLGESPGCDLDDPLPSRAGMKTVLDVLAIQKNFWP 551
           KLLVILEGGYNLRSISSSATAVIKVLLGESPGCDLDDPLPSRAGMKTVLDVLAIQKNFWP
Sbjct: 481 KLLVILEGGYNLRSISSSATAVIKVLLGESPGCDLDDPLPSRAGMKTVLDVLAIQKNFWP 540

Query: 552 VLESSFSQLQSQYEIYTTQRRKPRKKRGRGVVPPLCWRWSRKKLLYHLLKGQLRVRGKGF 611
           VLESSFSQLQSQYEIYTTQRRKPRKKRGRGVVPPLCWRWSRK+LLYH+LKGQLRVRGKGF
Sbjct: 541 VLESSFSQLQSQYEIYTTQRRKPRKKRGRGVVPPLCWRWSRKRLLYHVLKGQLRVRGKGF 587

[Close]

BLAST of Cp4.1LG04g12460 vs. ExPASy TrEMBL
Match: A0A6J1IEZ5 (Histone deacetylase OS=Cucurbita maxima OX=3661 GN=LOC111472641 PE=4 SV=1)

HSP 1 Score: 1160 bits (3000), Expect = 0.0
Identity = 582/600 (97.00%), Postives = 586/600 (97.67%), Query Frame = 0


Query: 12  VDGEAEVNLQKQGNELPSQILNGRHGKSGSDRSSVRPSLDYNCGDDNTGIASYRDVPSSV 71
           +DGEAEVNLQKQGNELPSQILNGRHGKSGSDR SVRPSLDYNCGDDNTGIASYRDVPSSV
Sbjct: 24  MDGEAEVNLQKQGNELPSQILNGRHGKSGSDRISVRPSLDYNCGDDNTGIASYRDVPSSV 83

Query: 72  NIDIQPDTLRKKARQQREMTFQDMCNNLDIFEDDDEDDDDDSDWEPLQKLREIMKWFCTN 131
           NIDIQPDTLRKKARQQREMTFQDMCNNLDIFEDDDEDDDDDSDWEPLQKLREIMKWFCTN
Sbjct: 84  NIDIQPDTLRKKARQQREMTFQDMCNNLDIFEDDDEDDDDDSDWEPLQKLREIMKWFCTN 143

Query: 132 CTMANLDVAVHCDSCGEHRESGILKHGFFAPSFLHESTLLEAELETRTDKGMVSQVSTSN 191
           CTMANLDVAVHCDSCGEHRESGILKHGFFAPSFLH+STLLEAELETRTDKGMVSQVSTSN
Sbjct: 144 CTMANLDVAVHCDSCGEHRESGILKHGFFAPSFLHKSTLLEAELETRTDKGMVSQVSTSN 203

Query: 192 SSTAIGFDERMLLHSENFTSCLVVFLLEKVEMKSHPHPERPDRLRAIAASLATAGIFPGR 251
           SSTAIGFDERMLLHSE             VEMKSHPHPERPDRLRAIAASLATAGIFPGR
Sbjct: 204 SSTAIGFDERMLLHSE-------------VEMKSHPHPERPDRLRAIAASLATAGIFPGR 263

Query: 252 CYPIPAREITKEELEMVHSAENIQAVEVSSNVISCYFTPDTYANKHSAQAARLAAGLCAD 311
           CYPIPAREITKEELEMVHSAENIQAVEVSSNVISCYFTPDTYANKHSAQAARLAAGLCAD
Sbjct: 264 CYPIPAREITKEELEMVHSAENIQAVEVSSNVISCYFTPDTYANKHSAQAARLAAGLCAD 323

Query: 312 LASEVFSGRAKNGFALVRPPGHHAGVKQAMGFCLHNNAAVSALAAQAAGAKKVLIVDWDV 371
           LASEVFSGRAKNGFALVRPPGHHAGVKQAMGFCLHNNAAVSALAAQAAGAKKVLIVDWDV
Sbjct: 324 LASEVFSGRAKNGFALVRPPGHHAGVKQAMGFCLHNNAAVSALAAQAAGAKKVLIVDWDV 383

Query: 372 HHGNGTQEIFEQNKSVLYISLHRHEFGRFYPGTGAADEVGTMGAEGYCVNVPWSQSGVGD 431
           HHGNGTQEIFEQNKSVLYISLHRHEFGRFYPGTGAADEVGTMGAEGYCVNVPWSQSGVGD
Sbjct: 384 HHGNGTQEIFEQNKSVLYISLHRHEFGRFYPGTGAADEVGTMGAEGYCVNVPWSQSGVGD 443

Query: 432 NDYIFAFKQVVLPIASAFAPDLTIISAGFDAARGDPLGMCDVTPAGYAQMTYLLNIVSGG 491
           NDYIFAFKQVVLPIASAFAPDLTIISAGFDAARGDPLGMCDVTPAGYAQMTYLLNIVSGG
Sbjct: 444 NDYIFAFKQVVLPIASAFAPDLTIISAGFDAARGDPLGMCDVTPAGYAQMTYLLNIVSGG 503

Query: 492 KLLVILEGGYNLRSISSSATAVIKVLLGESPGCDLDDPLPSRAGMKTVLDVLAIQKNFWP 551
           KLLVILEGGYNLRSISSSATAVIKVLLGESPGCDLDDPLPSRAGMKTVLDVLAIQKNFWP
Sbjct: 504 KLLVILEGGYNLRSISSSATAVIKVLLGESPGCDLDDPLPSRAGMKTVLDVLAIQKNFWP 563

Query: 552 VLESSFSQLQSQYEIYTTQRRKPRKKRGRGVVPPLCWRWSRKKLLYHLLKGQLRVRGKGF 611
           VLESSFSQLQSQYEIYTTQRRKPRKKRGRGVVPPLCWRWSRK+LLYH+LKGQLRVRGKGF
Sbjct: 564 VLESSFSQLQSQYEIYTTQRRKPRKKRGRGVVPPLCWRWSRKRLLYHVLKGQLRVRGKGF 610

[Close]

BLAST of Cp4.1LG04g12460 vs. ExPASy TrEMBL
Match: A0A6J1ICX4 (Histone deacetylase OS=Cucurbita maxima OX=3661 GN=LOC111472641 PE=4 SV=1)

HSP 1 Score: 1153 bits (2983), Expect = 0.0
Identity = 581/600 (96.83%), Postives = 585/600 (97.50%), Query Frame = 0


Query: 12  VDGEAEVNLQKQGNELPSQILNGRHGKSGSDRSSVRPSLDYNCGDDNTGIASYRDVPSSV 71
           +DGEAEVNLQKQGNELPSQILNGRHGKSGSDR SVRPSLDYNCGDDNTGIASYRDVPSSV
Sbjct: 24  MDGEAEVNLQKQGNELPSQILNGRHGKSGSDRISVRPSLDYNCGDDNTGIASYRDVPSSV 83

Query: 72  NIDIQPDTLRKKARQQREMTFQDMCNNLDIFEDDDEDDDDDSDWEPLQKLREIMKWFCTN 131
           NIDIQPDTLRK ARQQREMTFQDMCNNLDIFEDDDEDDDDDSDWEPLQKLREIMKWFCTN
Sbjct: 84  NIDIQPDTLRK-ARQQREMTFQDMCNNLDIFEDDDEDDDDDSDWEPLQKLREIMKWFCTN 143

Query: 132 CTMANLDVAVHCDSCGEHRESGILKHGFFAPSFLHESTLLEAELETRTDKGMVSQVSTSN 191
           CTMANLDVAVHCDSCGEHRESGILKHGFFAPSFLH+STLLEAELETRTDKGMVSQVSTSN
Sbjct: 144 CTMANLDVAVHCDSCGEHRESGILKHGFFAPSFLHKSTLLEAELETRTDKGMVSQVSTSN 203

Query: 192 SSTAIGFDERMLLHSENFTSCLVVFLLEKVEMKSHPHPERPDRLRAIAASLATAGIFPGR 251
           SSTAIGFDERMLLHSE             VEMKSHPHPERPDRLRAIAASLATAGIFPGR
Sbjct: 204 SSTAIGFDERMLLHSE-------------VEMKSHPHPERPDRLRAIAASLATAGIFPGR 263

Query: 252 CYPIPAREITKEELEMVHSAENIQAVEVSSNVISCYFTPDTYANKHSAQAARLAAGLCAD 311
           CYPIPAREITKEELEMVHSAENIQAVEVSSNVISCYFTPDTYANKHSAQAARLAAGLCAD
Sbjct: 264 CYPIPAREITKEELEMVHSAENIQAVEVSSNVISCYFTPDTYANKHSAQAARLAAGLCAD 323

Query: 312 LASEVFSGRAKNGFALVRPPGHHAGVKQAMGFCLHNNAAVSALAAQAAGAKKVLIVDWDV 371
           LASEVFSGRAKNGFALVRPPGHHAGVKQAMGFCLHNNAAVSALAAQAAGAKKVLIVDWDV
Sbjct: 324 LASEVFSGRAKNGFALVRPPGHHAGVKQAMGFCLHNNAAVSALAAQAAGAKKVLIVDWDV 383

Query: 372 HHGNGTQEIFEQNKSVLYISLHRHEFGRFYPGTGAADEVGTMGAEGYCVNVPWSQSGVGD 431
           HHGNGTQEIFEQNKSVLYISLHRHEFGRFYPGTGAADEVGTMGAEGYCVNVPWSQSGVGD
Sbjct: 384 HHGNGTQEIFEQNKSVLYISLHRHEFGRFYPGTGAADEVGTMGAEGYCVNVPWSQSGVGD 443

Query: 432 NDYIFAFKQVVLPIASAFAPDLTIISAGFDAARGDPLGMCDVTPAGYAQMTYLLNIVSGG 491
           NDYIFAFKQVVLPIASAFAPDLTIISAGFDAARGDPLGMCDVTPAGYAQMTYLLNIVSGG
Sbjct: 444 NDYIFAFKQVVLPIASAFAPDLTIISAGFDAARGDPLGMCDVTPAGYAQMTYLLNIVSGG 503

Query: 492 KLLVILEGGYNLRSISSSATAVIKVLLGESPGCDLDDPLPSRAGMKTVLDVLAIQKNFWP 551
           KLLVILEGGYNLRSISSSATAVIKVLLGESPGCDLDDPLPSRAGMKTVLDVLAIQKNFWP
Sbjct: 504 KLLVILEGGYNLRSISSSATAVIKVLLGESPGCDLDDPLPSRAGMKTVLDVLAIQKNFWP 563

Query: 552 VLESSFSQLQSQYEIYTTQRRKPRKKRGRGVVPPLCWRWSRKKLLYHLLKGQLRVRGKGF 611
           VLESSFSQLQSQYEIYTTQRRKPRKKRGRGVVPPLCWRWSRK+LLYH+LKGQLRVRGKGF
Sbjct: 564 VLESSFSQLQSQYEIYTTQRRKPRKKRGRGVVPPLCWRWSRKRLLYHVLKGQLRVRGKGF 609

[Close]

BLAST of Cp4.1LG04g12460 vs. TAIR 10
Match: AT3G18520.1 (histone deacetylase 15 )

HSP 1 Score: 679.9 bits (1753), Expect = 1.9e-195
Identity = 348/542 (64.21%), Postives = 417/542 (76.94%), Query Frame = 0


Query: 69  SSVNIDIQPDTLRKKARQQREMTFQDMCNNLDIFEDDDEDDDDDSDWEPLQKLREIMKWF 128
           S+ +I++ P    K+AR  REMTF+D+    D   +DD+D+DDD DWEP+Q   E +KW 
Sbjct: 33  SNGDINVAPGVSAKRARVSREMTFEDI-YGADALLNDDDDEDDDCDWEPVQAPMEFVKWC 92

Query: 129 CTNCTMANLDVAVHCDSCGEHRESGILKHGFFAPSFLHESTLLEAELETRTDKGMVSQVS 188
           C NCTM+N    VHC  CGEH+ESGIL+HG+ A  F  ++ L+E E +           S
Sbjct: 93  CVNCTMSNPGDMVHCCICGEHKESGILRHGYLASPFFKDTGLIEVEEK-------YGGSS 152

Query: 189 TSNSSTAIGFDERMLLHSENFTSCLVVFLLEKVEMKSHPHPERPDRLRAIAASLATAGIF 248
           ++ SSTA+GFDERMLLHSE              E+K+ PHPERPDRLRAIAASLATAG+F
Sbjct: 153 SATSSTAVGFDERMLLHSE-------------FEVKAQPHPERPDRLRAIAASLATAGVF 212

Query: 249 PGRCYPIPAREITKEELEMVHSAENIQAVEVSSNVISCYFTPDTYANKHSAQAARLAAGL 308
           PGRC PI AREITK+EL+MVH++E++ AV+ +S ++  YFT DTYAN++SA+AARLAAGL
Sbjct: 213 PGRCLPINAREITKQELQMVHTSEHVDAVDTTSQLLYSYFTSDTYANEYSARAARLAAGL 272

Query: 309 CADLASEVFSGRAKNGFALVRPPGHHAGVKQAMGFCLHNNAAVSALAAQAAGAKKVLIVD 368
           CADLA+++F+GR KNGFALVRPPGHHAGV+ AMGFCLHNNAAV+AL AQAAGAKKVLIVD
Sbjct: 273 CADLATDIFTGRVKNGFALVRPPGHHAGVRHAMGFCLHNNAAVAALVAQAAGAKKVLIVD 332

Query: 369 WDVHHGNGTQEIFEQNKSVLYISLHRHEFGRFYPGTGAADEVGTMGAEGYCVNVPWSQSG 428
           WDVHHGNGTQEIFEQNKSVLYISLHRHE G FYPGTGAADEVG+ G EGYCVNVPWS  G
Sbjct: 333 WDVHHGNGTQEIFEQNKSVLYISLHRHEGGNFYPGTGAADEVGSNGGEGYCVNVPWSCGG 392

Query: 429 VGDNDYIFAFKQVVLPIASAFAPDLTIISAGFDAARGDPLGMCDVTPAGYAQMTYLLNIV 488
           VGD DYIFAF+ VVLPIASAF+PD  IISAGFDAARGDPLG CDVTPAGY++MT +L  +
Sbjct: 393 VGDKDYIFAFQHVVLPIASAFSPDFVIISAGFDAARGDPLGCCDVTPAGYSRMTQMLGDL 452

Query: 489 SGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDLD-DPLPSRAGMKTVLDVLAIQK 548
            GGK+LVILEGGYNLRSIS+SATAVIKVLLGE+P  +L     PS AG++TVLDVL IQ 
Sbjct: 453 CGGKMLVILEGGYNLRSISASATAVIKVLLGENPENELPIATTPSVAGLQTVLDVLNIQL 512

Query: 549 NFWPVLESSFSQLQSQYEIYTTQRRKPRKKRGRGVVPPLCWRWSRKKLLYHLLKGQLRVR 608
            FWP L  S+S+L S+ E    + +K + KR + V  P  W+W RKKLLY+ L  ++  R
Sbjct: 513 EFWPSLAISYSKLLSELEARLIENKKNQMKR-KVVRVPTWWKWGRKKLLYNFLSARMISR 552

Query: 609 GK 610
            K
Sbjct: 573 SK 552

[Close]

BLAST of Cp4.1LG04g12460 vs. TAIR 10
Match: AT3G18520.2 (histone deacetylase 15 )

HSP 1 Score: 654.4 bits (1687), Expect = 8.7e-188
Identity = 333/514 (64.79%), Postives = 397/514 (77.24%), Query Frame = 0


Query: 69  SSVNIDIQPDTLRKKARQQREMTFQDMCNNLDIFEDDDEDDDDDSDWEPLQKLREIMKWF 128
           S+ +I++ P    K+AR  REMTF+D+    D   +DD+D+DDD DWEP+Q   E +KW 
Sbjct: 33  SNGDINVAPGVSAKRARVSREMTFEDI-YGADALLNDDDDEDDDCDWEPVQAPMEFVKWC 92

Query: 129 CTNCTMANLDVAVHCDSCGEHRESGILKHGFFAPSFLHESTLLEAELETRTDKGMVSQVS 188
           C NCTM+N    VHC  CGEH+ESGIL+HG+ A  F  ++ L+E E +           S
Sbjct: 93  CVNCTMSNPGDMVHCCICGEHKESGILRHGYLASPFFKDTGLIEVEEK-------YGGSS 152

Query: 189 TSNSSTAIGFDERMLLHSENFTSCLVVFLLEKVEMKSHPHPERPDRLRAIAASLATAGIF 248
           ++ SSTA+GFDERMLLHSE              E+K+ PHPERPDRLRAIAASLATAG+F
Sbjct: 153 SATSSTAVGFDERMLLHSE-------------FEVKAQPHPERPDRLRAIAASLATAGVF 212

Query: 249 PGRCYPIPAREITKEELEMVHSAENIQAVEVSSNVISCYFTPDTYANKHSAQAARLAAGL 308
           PGRC PI AREITK+EL+MVH++E++ AV+ +S ++  YFT DTYAN++SA+AARLAAGL
Sbjct: 213 PGRCLPINAREITKQELQMVHTSEHVDAVDTTSQLLYSYFTSDTYANEYSARAARLAAGL 272

Query: 309 CADLASEVFSGRAKNGFALVRPPGHHAGVKQAMGFCLHNNAAVSALAAQAAGAKKVLIVD 368
           CADLA+++F+GR KNGFALVRPPGHHAGV+ AMGFCLHNNAAV+AL AQAAGAKKVLIVD
Sbjct: 273 CADLATDIFTGRVKNGFALVRPPGHHAGVRHAMGFCLHNNAAVAALVAQAAGAKKVLIVD 332

Query: 369 WDVHHGNGTQEIFEQNKSVLYISLHRHEFGRFYPGTGAADEVGTMGAEGYCVNVPWSQSG 428
           WDVHHGNGTQEIFEQNKSVLYISLHRHE G FYPGTGAADEVG+ G EGYCVNVPWS  G
Sbjct: 333 WDVHHGNGTQEIFEQNKSVLYISLHRHEGGNFYPGTGAADEVGSNGGEGYCVNVPWSCGG 392

Query: 429 VGDNDYIFAFKQVVLPIASAFAPDLTIISAGFDAARGDPLGMCDVTPAGYAQMTYLLNIV 488
           VGD DYIFAF+ VVLPIASAF+PD  IISAGFDAARGDPLG CDVTPAGY++MT +L  +
Sbjct: 393 VGDKDYIFAFQHVVLPIASAFSPDFVIISAGFDAARGDPLGCCDVTPAGYSRMTQMLGDL 452

Query: 489 SGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCDLD-DPLPSRAGMKTVLDVLAIQK 548
            GGK+LVILEGGYNLRSIS+SATAVIKVLLGE+P  +L     PS AG++TVLDVL IQ 
Sbjct: 453 CGGKMLVILEGGYNLRSISASATAVIKVLLGENPENELPIATTPSVAGLQTVLDVLNIQL 512

Query: 549 NFWPVLESSFSQLQSQYEIYTTQRRKPRKKRGRG 582
            FWP L  S+S+L S+ E    + +  +     G
Sbjct: 513 EFWPSLAISYSKLLSELEARLIENKSEKSDEKEG 525

[Close]

BLAST of Cp4.1LG04g12460 vs. TAIR 10
Match: AT5G61060.1 (histone deacetylase 5 )

HSP 1 Score: 256.5 bits (654), Expect = 5.3e-68
Identity = 144/344 (41.86%), Postives = 197/344 (57.27%), Query Frame = 0


Query: 228 HPERPDRLRAIAASLATAGIFPGRCYPIPAREITKEELEMVHSAENIQAVEVSSNVISCY 287
           HPE PDR+R I   L  AG+   RC  + + +   + L++VH+ +++  V+  S     Y
Sbjct: 46  HPECPDRIRVIWEKLQLAGV-SQRCVVLGSSKAEDKHLQLVHTKDHVNLVKSISTKQKDY 105

Query: 288 -------FTPDTYANKHSAQAARLAAGLCADLASEVFSGRAKNGFALVRPPGHHAGVKQA 347
                       Y N  S++AA LAAG    LA +V  G    GFA+VRPPGHHA   +A
Sbjct: 106 RRNRIASQLNSIYLNGGSSEAAYLAAGSVVKLAEKVAEGELDCGFAIVRPPGHHAEADEA 165

Query: 348 MGFCLHNNAAVSAL----AAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHE 407
           MGFCL NN AV+A          G KK+LIVDWDVHHGNGTQ++F ++  VL+ S+HRHE
Sbjct: 166 MGFCLFNNVAVAASFLLNERPDLGVKKILIVDWDVHHGNGTQKMFWKDPRVLFFSVHRHE 225

Query: 408 FGRFYPG--TGAADEVGTMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFAPDLT 467
           +G FYP    G  + VG    EG+ +NVPW Q   GD DY+ A+  +++P+A  F PD+ 
Sbjct: 226 YGGFYPAGDDGDYNMVGEGPGEGFNINVPWDQGRCGDADYLAAWDHILIPVAREFNPDVI 285

Query: 468 IISAGFDAARGDPLGMCDVTPAGYAQMTYLLNIVSGGKLLVILEGGYNLRSISSSATAVI 527
            +SAGFDAA  DPLG C VTP GY+ M   L   + GK+++ LEGGYNL SI+ S+ A +
Sbjct: 286 FLSAGFDAAINDPLGGCCVTPYGYSVMLKKLMEFAQGKIVLALEGGYNLDSIAKSSLACV 345

Query: 528 KVLLGESPGCDLDDPLPSRAGMKTVLDVLAIQKNFWPVLESSFS 559
           +VLL +       +  P  +  + +  V      +WP L    S
Sbjct: 346 QVLLEDKQIQGPPEAYPFESTWRVIQAVRKRLCTYWPSLADELS 388

[Close]

BLAST of Cp4.1LG04g12460 vs. TAIR 10
Match: AT5G61060.2 (histone deacetylase 5 )

HSP 1 Score: 252.7 bits (644), Expect = 7.6e-67
Identity = 143/348 (41.09%), Postives = 198/348 (56.90%), Query Frame = 0


Query: 228 HPERPDRLRAIAASLATAGIFPGRCYPIPAREITKEELEMVHSAENIQAVEVSSNVISCY 287
           HPE PDR+R I   L  AG+   RC  + + +   + L++VH+ +++  V+  S     Y
Sbjct: 46  HPECPDRIRVIWEKLQLAGV-SQRCVVLGSSKAEDKHLQLVHTKDHVNLVKSISTKQKDY 105

Query: 288 -------FTPDTYANKHSAQAARLAAGLCADLASEVFSGRAKNGFALVRPPGHHAGVKQA 347
                       Y N  S++AA LAAG    LA +V  G    GFA+VRPPGHHA   +A
Sbjct: 106 RRNRIASQLNSIYLNGGSSEAAYLAAGSVVKLAEKVAEGELDCGFAIVRPPGHHAEADEA 165

Query: 348 MGFCLHNNAAVSAL----AAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHE 407
           MGFCL NN AV+A          G KK+LIVDWDVHHGNGTQ++F ++  VL+ S+HRHE
Sbjct: 166 MGFCLFNNVAVAASFLLNERPDLGVKKILIVDWDVHHGNGTQKMFWKDPRVLFFSVHRHE 225

Query: 408 FGRFYPG--TGAADEVGTMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFAPDLT 467
           +G FYP    G  + VG    EG+ +NVPW Q   GD DY+ A+  +++P+A  F PD+ 
Sbjct: 226 YGGFYPAGDDGDYNMVGEGPGEGFNINVPWDQGRCGDADYLAAWDHILIPVAREFNPDVI 285

Query: 468 IISAGFDAARGDPLGMCDVTPAGYAQMTYLLNI----VSGGKLLVILEGGYNLRSISSSA 527
            +SAGFDAA  DPLG C VTP GY+ M   + +     + GK+++ LEGGYNL SI+ S+
Sbjct: 286 FLSAGFDAAINDPLGGCCVTPYGYSVMLKKVGVELMEFAQGKIVLALEGGYNLDSIAKSS 345

Query: 528 TAVIKVLLGESPGCDLDDPLPSRAGMKTVLDVLAIQKNFWPVLESSFS 559
            A ++VLL +       +  P  +  + +  V      +WP L    S
Sbjct: 346 LACVQVLLEDKQIQGPPEAYPFESTWRVIQAVRKRLCTYWPSLADELS 392

[Close]

BLAST of Cp4.1LG04g12460 vs. TAIR 10
Match: AT5G61070.1 (histone deacetylase of the RPD3/HDA1 superfamily 18 )

HSP 1 Score: 247.7 bits (631), Expect = 2.5e-65
Identity = 138/343 (40.23%), Postives = 196/343 (57.14%), Query Frame = 0


Query: 230 ERPDRLRAIAASLATAGIFPGRCYPIPAREITKEELEMVHSAENIQAVEVSS-------- 289
           E PDR+R I   L  AG+   RC  +   +   + L++VH+ +++  V+  S        
Sbjct: 81  ECPDRIRVIWEKLQLAGV-TQRCVVLGGSKAEDKHLKLVHTKKHVNLVKSISTKKKDSRR 140

Query: 290 NVISCYFTPDTYANKHSAQAARLAAGLCADLASEVFSGRAKNGFALVRPPGHHAGVKQAM 349
           N I+       Y N  S++AA LAAG    +A +V  G    GFA+VRPPGHHA   +AM
Sbjct: 141 NKIASQL-DSIYLNGGSSEAAYLAAGSVVKVAEKVAEGELDCGFAIVRPPGHHAESDEAM 200

Query: 350 GFCLHNNAAVSAL----AAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEF 409
           GFCL NN AV+A            KK+LIVDWD+HHGNGTQ++F ++  VL  S+HRH+ 
Sbjct: 201 GFCLFNNVAVAASFLLNERPDLDVKKILIVDWDIHHGNGTQKMFWKDSRVLIFSVHRHDH 260

Query: 410 GRFYP--GTGAADEVGTMGAEGYCVNVPWSQSGVGDNDYIFAFKQVVLPIASAFAPDLTI 469
           G FYP    G  + VG    EG+ +NVPW Q G GD DY+  +  +++P+   F PD+ +
Sbjct: 261 GSFYPFGDDGDFNMVGEGPGEGFNINVPWEQGGCGDADYLAVWNHILIPVTKEFKPDIIL 320

Query: 470 ISAGFDAARGDPLGMCDVTPAGYAQMTYLLNIVSGGKLLVILEGGYNLRSISSSATAVIK 529
           +SAGFDAA GDPLG C VTP GY+ M   L   + GK+++ LEGGYNL S+  S+ A ++
Sbjct: 321 LSAGFDAAIGDPLGGCCVTPYGYSVMLKKLMEFAHGKIVLALEGGYNLESLGKSSLACVQ 380

Query: 530 VLLGESPGCDLDDPLPSRAGMKTVLDVLAIQKNFWPVLESSFS 559
           VLL +       +  P  +  + +  V      +WP L++S +
Sbjct: 381 VLLEDKQIHGSSETYPLESTRRVIQAVRERLCTYWPSLDASMA 421

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g12460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GXJ1	2.7e-194	64.21	Histone deacetylase 15 OS=Arabidopsis thaliana OX=3702 GN=HDA15 PE=1 SV=2	[more]
Q5A960	2.2e-74	41.93	Histone deacetylase HDA1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=...	[more]
P53973	5.9e-72	40.36	Histone deacetylase HDA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c...	[more]
P56523	3.2e-70	45.59	Histone deacetylase clr3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) ...	[more]
Q613L4	1.6e-69	39.13	Histone deacetylase 4 OS=Caenorhabditis briggsae OX=6238 GN=hda-4 PE=3 SV=1	[more]

BLAST of Cp4.1LG04g12460 vs. NCBI nr


Match Name	Identity	Description
KAG7022142.1	99.02	Histone deacetylase 15 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023531085.1	97.87	histone deacetylase 15 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023531086.1 h...	[more]
XP_022925300.1	97.38	histone deacetylase 15 isoform X1 [Cucurbita moschata] >XP_022925301.1 histone d...	[more]
XP_023531088.1	97.71	histone deacetylase 15 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022925310.1	97.22	histone deacetylase 15 isoform X2 [Cucurbita moschata]	[more]

BLAST of Cp4.1LG04g12460 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1EET5	97.38	Histone deacetylase OS=Cucurbita moschata OX=3662 GN=LOC111432575 PE=4 SV=1	[more]
A0A6J1EHK5	97.22	Histone deacetylase OS=Cucurbita moschata OX=3662 GN=LOC111432575 PE=4 SV=1	[more]
A0A6J1IF17	97.00	Histone deacetylase OS=Cucurbita maxima OX=3661 GN=LOC111472641 PE=4 SV=1	[more]
A0A6J1IEZ5	97.00	Histone deacetylase OS=Cucurbita maxima OX=3661 GN=LOC111472641 PE=4 SV=1	[more]
A0A6J1ICX4	96.83	Histone deacetylase OS=Cucurbita maxima OX=3661 GN=LOC111472641 PE=4 SV=1	[more]

BLAST of Cp4.1LG04g12460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18520.1	1.9e-195	64.21	histone deacetylase 15	[more]
AT3G18520.2	8.7e-188	64.79	histone deacetylase 15	[more]
AT5G61060.1	5.3e-68	41.86	histone deacetylase 5	[more]
AT5G61060.2	7.6e-67	41.09	histone deacetylase 5	[more]
AT5G61070.1	2.5e-65	40.23	histone deacetylase of the RPD3/HDA1 superfamily 18	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000286	Histone deacetylase family	PRINTS	PR01270	HDASUPER	coord: 451..461 score: 42.83 coord: 330..353 score: 41.27 coord: 363..378 score: 61.3
IPR037138	Histone deacetylase domain superfamily	GENE3D	3.40.800.20	Histone deacetylase domain	coord: 186..577 e-value: 5.4E-127 score: 426.1
IPR023801	Histone deacetylase domain	PFAM	PF00850	Hist_deacetyl	coord: 228..516 e-value: 9.3E-87 score: 291.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..50
None	No IPR available	PANTHER	PTHR45634:SF11	HISTONE DEACETYLASE-RELATED	coord: 72..607
None	No IPR available	PANTHER	PTHR45634	HISTONE DEACETYLASE	coord: 72..607
None	No IPR available	CDD	cd09992	HDAC_classII	coord: 228..518 e-value: 7.70395E-139 score: 403.802
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 127..146
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 122..152 score: 8.117602
IPR023696	Ureohydrolase domain superfamily	SUPERFAMILY	52768	Arginase/deacetylase	coord: 193..546

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g12460.1	Cp4.1LG04g12460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006325	chromatin organization
biological_process	GO:0009294	DNA mediated transformation
biological_process	GO:0070932	histone H3 deacetylation
biological_process	GO:0009640	photomorphogenesis
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0032041	NAD-dependent histone deacetylase activity (H3-K14 specific)