Cp4.1LG04g12320 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG04g12320
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Signal recognition particle subunit SRP68
Location	Cp4.1LG04: 8157748 .. 8165531 (-)
RNA-Seq Expression	Cp4.1LG04g12320
Synteny	Cp4.1LG04g12320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGGGATTTGGAAAGCAGCTACATTGGATCATTCTCCAAATTTCATTGATTTTTGGTGTGGCGTTGGATTTTGGAGGCTTTCAAATTAGAGAACAGTGCGAATCACAGGGCAATTCAAGGATACGCAGCAGCCGTTGCCACTTCCCACAGATCATCAGCGCAATTGTGCAGAGACCTTCATTGGGTAAGTTTCCTAATTACCCCTCCAATGTATGCCAGATTCCGATCCCCAACTCCCGTCTCAGCAGTTTTCCTGCTGGTCTAGTCGGAATCCATGGATGTCGCTTCTTTCATTGGCTACTGTTTATCAGTTTCATAATCTGATGGGTGCGTTTCGTTTGTTTTTTTAAGGCTCTGGTTGCGAAATAGAGCCAAATGGCGTCCATGGAAATTGACAGCGCTAATTCCAATGCTTCTGACCCTGATAATCCTAGATTTTCCATTAACGGTATGCCCATGTCAATTTTGAAGTTGTTTGAGCTTTTTTGGGTTTTAAAACTGCGCCTGGTGTGTTCATTTTGTCCATTTTTATCAGCTGTGGCTAAATTCGTCATGTTAGACTAAACTTGTTGGATGCTGATGGTGGTTTATCTGTTGTTTTTATTTGTTTTTCGAAGTATTGCAGCTCTTGAAATCTGCCCAGATGCAGCATGGGTTACGGCATGGAGATTATACTCGCTATCGGTTTGTGCAAATGCGTTTTGTATAATTTGGTTTAGTTGATAAATTTTGATGCCGTTTTAGTTTCTTACTTCCAACTATACTAGCGTTGATAGTGTTATGAATTTCTCCTTATTGCGTAGGCTGTTGATTTTTGGTAGATTTGATCTTTTTGATGTGTAGGAGATATTGCACAGCTCGGCTAAGGAGGCTATATAAATCTCTGAAGTTCACTCATGGCCGTGGAAAGTACACCAAACGAGCCATAACTCAATCAACTGTTACTGAAGTCAGGTTTGTCCCATTTAATAATTTTGTAATGCAGAGAGTAGCGTAGATTCTTCGAATATTTACATGTTGCTTCTTTACTCGCCGTTTTTTCATTTGAGCTTGAAAGCAGTCTCCTTCTGTTACTGATTAGAAAAATACTCTAGATATTGTTAACTAGATGGTCAATGATGTCTCCCCTTAATGTACACTGATTCTAATGAAGTGGGGAAGGAACAAGGAAGGGAAAGAAGATGGCAAAGTGTTAATTTATTTGAGCATTGTCTGTGGCTGTGTTAACTAATTCAACAAAGTTTGAAACTATCAACCTTCTGGATTTAAAATAGGTTTCTCCATGTGGTTCTTTATACGGCGGAGAGAGCATGGAGTCATGCCATGGAAAAAAGGCAATTACCAGATGGTCCAAATGCACGTCAGCGTATCTATTTGATTGGTAGGCTCAGAAAGGCAGTAAAATGGGCGACTCTCTTCGCACAATTGTGTGCAAGCAAGGGAGACTCGAGAACATCTTTGGAAGCAGAGGTTTGGTCCTAGTTTTCTTCTTATGGAATATATGTTGTATATGATACTCTTTTAACTTCAAAATTTTAGAATTACGTCTTCATGAAGAGTGATTTTCATCATTTTTTTTTTTGTTTCTCAGCTGATAATTGTTTGTTCATATATGTAGGCTTATGCATCTTATATGACTGGGAACTTGTTGTTTGAACAAGATCGGAATTGGGACATAGCATTATTGAACTTCAAAAGATCTAGGTGCTTCCTTGTATTTTCTCGATCTTTAAATTCCTTGTTAGAATGATCAACTAATTCTTGCATTACCTTCTCTTTAAGGGTTAATATGCATTATGCAAATTTTTTGCTCTATGGATGTTTTACTACCTATTTTTGTTTATTTATTTATTTTTCTGTCCTCTATATTAGAAAGGTCAAAAATCCCTTTGAGAGATAATGCCACTGTCATACTAGGAAAGTCTGGAAGACTCATTTAGAAGAGACTTTGGGATAGAATTAGGTTTAGTACCTCTATTCAAGCTTTAATTCCCACAAATTTGCATATAAATTATTTTGATTTAGGTGGCTGGTACACTATGTTGACATCCCGTAATTCTTCCCTCTCCTCTTCTTTTCACTGAAAATTCTATTTTGTTCCAACCAAATTTCCCAAAAAATGGCCCTAGAAGCATTAAGTGAAAAAGTCCTCGTCTTGTCTTTGAAACTTTTGACCAAAACGGAGAATATGAATGGCTTTGGTGATCCTCGAAGGTTGGTTAAGCTGACAGCAACAGGATCATTAAAGTTTCAGTGTGTAAGTGCAACTGAGGAAAAGGTGATTAGCATTCTTATTCATACTGTTGAAGATCACCGTAGGATAATGCGAAGACAATTACATATCTATGATGTATACTGTTATCCATTTGTAAAGAATCAAATAATTGTGAAGGATACATCTTATAGCAAAAAAATTTGTAAAGCACACTTGATCTCTTAAAGGCCCTGCATTGTTTATCATCTCATTTTGATTTAGATAACATGATTAGCTAATATTTTGTTTACCTTTCAGAGCTGTTTATGAGGAACTTGGGAAAGTAGGAGATCTAGAGAATCAAGTTTTGTGCCGTGAACGTGTGGAGGAGCTAGAACCTAGTATAAGATATTGCTTGCACAAGATTGGCAAGTCAAATATCCAGGCCTCTGAACTTCTACATATTGGGGAGATGGAAGGCCCTGCTCTCGACCTTTTCAAAGCTAAACTAGAGGTCTGTTTGCTTGCCTTTTACTTTCAAGTTTATTTATTTATCATTTTTGTTCAGATTTTTATTTATTTGATTTTTAAGCATTGCATATACAATGTATTTATGTACGAGCACCATAAATTAAAAAATTTGACTGAAAGAGATCTGTCAGCTAACAAAAATCTCAGACTCATATTGGTTTTCACAGTTTATAAGAATTCAATTCTCTTGTTGATTTCGGTGTTTCCTTTTCTGCAAAGTTGTTTTATTGTCAATAAAGTTATATATTAGTTTTCAAGAAAGCGTTATTTGAGACTTTGGTTTTGATTTAATTGATTCCAGAGCAACTTTTTGCTTTAGAAGTGTTCTGGCTTCAACAAAGTTTTTCTTTGATTTAGTTTGGAGAGGTTTTCGCCCAAGGACAAGTTCGAGTTTTTAGACTAGATTTCTCTCATCTCCCTTTCTTTTAGACTTCAGTATAGGCATAGATCTTCGTGGTTAATGGTGATGGACCTGTGGTTGTTAGAACTTATACCTTCATTTTCTCAATGGAAGCTTCGGTTTTCATAAAAAGAGAAAAAGGAAAAATGAAAAAAAACCTTGTATCTTCATTTTGGTATTCTGACACGGGTTTTTTCCCCAGTAGTTAGCAGACAGTAATCTACAGTAGTTGAAGTCTATTGACTAGTTTATTTAATTGCGGATTTCAAACAGAGGTTATCTTTCACTGTAGTATACTTGTTTTTGATGTCTGTCTATTTGTTGTTAGATAGACCGTAGACCTAAGAACATTGCTTGTTATAGAAAACATAAGACAACAGATAACCACAGGAATATCCTTCAACTGCCTACTGCTTGATCTATTAAAGTTTCATAATCGTGGCATTGATTTTCTCTTGTTTTTTGTTTGGTTAATCTGATAATGTTTTTACTCTTTTAGTCTATTAGTGGTCTTAGTTTATGTTATAATCTTGTACATTCTTGCTTGTAGGCTGTCATGTCGGAGGCCAGATCTCAGCAGGCTGTTTCCATGACCGAGTTTCATTGGCTTGGTCATAGGTTTCCAATATCCAATGCTAAAACTAGAGTTTCCATATTGAAAGGTTGCTGTTCGTTTGAGCAATCGTTTAAATATTGAGATTTATGATGATTTTATTGTGTAGGAACTTAGATGCTAATAACCAGAAATTTAATGGTCTGTTTCTTATATGCTCCAATCAAAGAGGTTTGTTTCCAAAACTCATAGATGCAATATTTAGTTTGTCCTTTGGTAGAAATTCTAGAAAAGAGGGGTCTGGGGAACAGTTGAAGATAGGATAAAAAGATGACTTTCTAAGTGAAGAAACTTCTATGTATCTGGAATAAGATGACTACTTTAATCCTTTCGGTTATTGACTAATATCTCTTTGGATTTCGTGTCCCTATTGCAATCAGTTTGGGTTTTAGACTGGATGTAGTGTTGATGGGGACGGTGAAGACTAACTCAAAATGGTAGATAGTATTACTCTTTCGGCCTATTTAAACCAAGAACATATGGATCTTAATGAGAATGTTAGTATGGCAGAAGTTAATACCTCAAATTGGGAAAGAGAACGTTCGAGAGGAATACTAAAGGCATAGCTTACTTTTGTTATTTACTTGATCTAATGAAAGTTACTACTTTGCTGTATTCTCTCTTAATTAATTGGCTTTTTGTTTGCTGTCATCTATTCTTCTTTCCCATGCGATTTCTCCCACTGATATCCTCATTTTATTTTTCTTGGCTACAATGTATGTATGTTCCAGACGTGTGCTGGTATCTAGATTCTGGTTTTATATTGCTTACACTGAAGTGTTTGGCTAGATAAGTTATGAAGGAATATGTTGTGAAACCTATTCCTTATTATGTTGTATTTGCTAGAATCTGTCGAATGCATGCACCTACCATCAGGTTCATATTTTCACTTTTGTCATCCAGAATTCCTAATTATGTCTGCATGAAATTATCCAGCTCGGGAATTAGAAAAGGATTTGCAAGATTCAGCAGATTCACTTCCAGCAGAAAAAAGATTGACCATTTTTGATAAGATCTTTACAGCATACCATGAGGCAAGGAGCTCTATTCGCAGTGATCTGGTATGTGGAAGATTGACATTAGCCTTCCTTTGAATTGTTCTAGAGTTTGCATCTCTACTAATATGATCTTCCAGACTTATGTTGCCGTTCTGTTTGTTTAGGTCAGCGCTGGAAATGCTGAAAATGTCAAAGATGATTTAAGTGGGCTTGATAAAGCTGTTAGTGCAGTGTTGGGTCAAAGGACAATTGAACGCAACCAGTTATTGGTGAAAATCGCAAAAAGTAAGCTTGTTAGGCGCCACGATGAAAAAAATGAGAAAGTTACCAAGCCGGAGGAACTTGTTCGCTTGTATGATCTTTTATTACAAGTAAGCAGTTTTATGTATTCTTATATTCTTTTTCGTGTTTCTGTCATTGGATGCTCGACCACGATTAGAGGTTTTTCAGGAGTTAGTAATAGCTTTTACAATTTATTTATTGATTATTATTAATTATTTTTTTTGCAGAATATTGCTGACCTTTCTGATTTAGTCAGTTCGGGAAGAGATAGGAAGCCAGAAGAAGTGACATTTGCTGAAGAGTGTTCACTTAAAAGTATAGCTTTTCGTGGAGAAAGGTTTCGTCCCTTGAGTTCTTTATCTTTTTTACTGATCAGAAAAGCCTCCATATTTACATCATAATCTAGCAATTTGCATTCTAAATTATCTGTTCTGTTCTTTGTAATCATTGAAAATTTGCTCATAATGCGCTAGATTCCCAACCATGTTCCTTGACCTCATAACGCCTTGCTTTTAGCTGTATCCTGCACATTGTTTGTTTTACATTCCCTTGTTTTCTATTTAACCTGCCCAGTTGGTATTATGCCAGTGTTGATATGCCTTGGCCACATCTCTTTGCAGGCTCATATCGACATATTTTCATTTTGTAGATAGATCTTTTAATATATTTCTATATTTGTTATTTTAATTAGTGTTATTTCTGTTGAAGACAATGGTCTTTCAAAAATTACTTGTTAGAGACAAAGGTTTCATTTGAAAAGAATGGGGTGATACAATAAAAGGCAAGGGTTCAGGCCTCTCCAAACAATTGAGAGGGGAAGTTTGCAAAAATGGAAAAGTTTGCAAAACATCTGTGTGTGTAATCTTGACGAAAGAGAAACAAAATAAAGTAGTCTCCCAAATCCGGGTTTCTGTAAGTATCCTCGAGGATTCCGTTGTTTCTATGCATGTAGGATCTCCCAAATCTCTTAATGCAGCTAAAACTTATTCAACCCTTGAAAACATGTAGCATGTTTGAGTAGAGAGACGGAAAGAGACAAGGATTTCATTTGGAAAAGACGGATGATACAATAAAGGGCAAGGATTTTCATATTTTTTTGAAAGTCCATTGCGCACCTATAACAGTTTGTATACCCCCCCCCCCCCACCGAAAAGATAAAGAGAATTAGTTCGCACTTCTCGTTTTCAAAGGTTGTAACCAGTGCTTATTTTGAGACATAACTGGTGTCTGGTTATTCTGGACTTCATTCCTTGCCACGTGCACATTTTCATCGTTACATTTGAAGTAGGCAGATTTATATATGAAATTGATAAGAGTTTTAATTGCTTCTTCAATGTAAAGTTATTTTTTTCTCTACCAATTGTGTGTTTGCCTATTTATTCCCTGATCTTTCACATTTATAATCAAATTATTTTTGTCTTTTATTCTTGATAGTTGTCATTACTCACTCAATTGTGGATTAATTGATGTTTGCTGGCACTAATTTACTGTAAATGATGGATCGTCCTCTATGTATTTTCAGGTGCTTTTACTTGGCAAAATCATACAGTCTGGCTGGAAAAAGAGCTGAAGCTCATGTACTTTACTGCCATGCTCGCTCCCTTGTCGAAGATGCCATACAAAAATTCCGTTCGGAAAATATCAGTGACCCGGTATGTGTATCATATAGAATAGTCTGGTATCATACTAGTCAGGAGTCTGGACTTTTTGCAAGTATACATTTTGAAAGAACTTCTACTGAACCTTTTGATACAGAAGATTATCGAAGAGTTGAAGACATTGATTGACGAATGCAGAGCTAACAGTTGTATAGAGCATGCAACTGGAATTATTGAGGAGATTAAGGCTCCGGAGAATCTATCGAACAAGATCTCGAACATGTCATTAACTGGAGCAGAGAAGAAGGTACTGATTGCGTTCATTCTATTTGCCTTTTCCTTTTTAAGCTGGAACCAGATTGAATGAACTTGAATTGCTTGGTCCTGGATGCAATAGTACTCGCTCGTAGAAGAAAATCATGTCTTCAATGAGTAAATCTTTGAGCATTTTGATTGATTTCCTGTTTTATAGATACACCAAATTCTTGTTTCTTCCTAGCCAAGTCATGTTTTGGCGAGCACATGTTCTATATTAGTTACATCTTCCTGGATGCTAACATCTATGAAATCCATCTTCAAAATGTTGCAGCCGGTCAAATACCTCCTTCAGAGCCTCGACAACTATGAGTCTGCGATCGCCAATTCGAATACCAAGAGTGCTCCACGCATTGAAGCCTTTCCTCCCGCCTTTCAGGCGATCCCCCGGAATCCCATTGTTCTGGACCTTGCTTTTAACTTCATTGACTTCCCATCTCTTGAGAATAGAATGAAAAAGGACAGAAAGGGCTTTATCAGTAGGCTATGGGGATGAGTTTCTTTGGCAAGTTTTGGTTTTCTTTGCTGCCTGAGTTTTTGTTTTGCTGGTGGATACATGAATATAGAGACAGAACTTGGTACTGATCCTTTAACAACTTCCCAGCCCCCCTTGTGAATTTTGGGTCACGGTTGAAAACTAATGACTGTTTGTTTCTTGGTTTCTCTCGGATGTGTAGCAAAGATATAGGACCAATTTTCAGGATTTTTGTTAGAGCCTGCTTGTGACTGTTGCAGATTACACATTGTTTAGTATCTGATTTTTGCTAATAATTTTGAGTTCATTGTGGATATTTTAGGCGTTGATTCGAATATTCTGTCAAGATACAGTTATTTACCACACCTATGAGGATAT

mRNA sequence

TAGGGATTTGGAAAGCAGCTACATTGGATCATTCTCCAAATTTCATTGATTTTTGGTGTGGCGTTGGATTTTGGAGGCTTTCAAATTAGAGAACAGTGCGAATCACAGGGCAATTCAAGGATACGCAGCAGCCGTTGCCACTTCCCACAGATCATCAGCGCAATTGTGCAGAGACCTTCATTGGGCTCTGGTTGCGAAATAGAGCCAAATGGCGTCCATGGAAATTGACAGCGCTAATTCCAATGCTTCTGACCCTGATAATCCTAGATTTTCCATTAACGTATTGCAGCTCTTGAAATCTGCCCAGATGCAGCATGGGTTACGGCATGGAGATTATACTCGCTATCGGAGATATTGCACAGCTCGGCTAAGGAGGCTATATAAATCTCTGAAGTTCACTCATGGCCGTGGAAAGTACACCAAACGAGCCATAACTCAATCAACTGTTACTGAAGTCAGGTTTCTCCATGTGGTTCTTTATACGGCGGAGAGAGCATGGAGTCATGCCATGGAAAAAAGGCAATTACCAGATGGTCCAAATGCACGTCAGCGTATCTATTTGATTGGTAGGCTCAGAAAGGCAGTAAAATGGGCGACTCTCTTCGCACAATTGTGTGCAAGCAAGGGAGACTCGAGAACATCTTTGGAAGCAGAGGCTTATGCATCTTATATGACTGGGAACTTGTTGTTTGAACAAGATCGGAATTGGGACATAGCATTATTGAACTTCAAAAGATCTAGGTTGGTTAAGCTGACAGCAACAGGATCATTAAAGTTTCAGTGTGTAAGTGCAACTGAGGAAAAGGCTGTCATGTCGGAGGCCAGATCTCAGCAGGCTGTTTCCATGACCGAGTTTCATTGGCTTGGTCATAGGTTTCCAATATCCAATGCTAAAACTAGAGTTTCCATATTGAAAGCTCGGGAATTAGAAAAGGATTTGCAAGATTCAGCAGATTCACTTCCAGCAGAAAAAAGATTGACCATTTTTGATAAGATCTTTACAGCATACCATGAGGCAAGGAGCTCTATTCGCAGTGATCTGGTCAGCGCTGGAAATGCTGAAAATGTCAAAGATGATTTAAGTGGGCTTGATAAAGCTGTTAGTGCAGTGTTGGGTCAAAGGACAATTGAACGCAACCAGTTATTGGTGAAAATCGCAAAAAGTAAGCTTGTTAGGCGCCACGATGAAAAAAATGAGAAAGTTACCAAGCCGGAGGAACTTGTTCGCTTGTATGATCTTTTATTACAAAATATTGCTGACCTTTCTGATTTAGTCAGTTCGGGAAGAGATAGGAAGCCAGAAGAAGTGACATTTGCTGAAGAGTGTTCACTTAAAAGTATAGCTTTTCGTGGAGAAAGGTGCTTTTACTTGGCAAAATCATACAGTCTGGCTGGAAAAAGAGCTGAAGCTCATGTACTTTACTGCCATGCTCGCTCCCTTGTCGAAGATGCCATACAAAAATTCCGTTCGGAAAATATCAGTGACCCGAAGATTATCGAAGAGTTGAAGACATTGATTGACGAATGCAGAGCTAACAGTTGTATAGAGCATGCAACTGGAATTATTGAGGAGATTAAGGCTCCGGAGAATCTATCGAACAAGATCTCGAACATGTCATTAACTGGAGCAGAGAAGAAGCCGGTCAAATACCTCCTTCAGAGCCTCGACAACTATGAGTCTGCGATCGCCAATTCGAATACCAAGAGTGCTCCACGCATTGAAGCCTTTCCTCCCGCCTTTCAGGCGATCCCCCGGAATCCCATTGTTCTGGACCTTGCTTTTAACTTCATTGACTTCCCATCTCTTGAGAATAGAATGAAAAAGGACAGAAAGGGCTTTATCAGTAGGCTATGGGGATGAGTTTCTTTGGCAAGTTTTGGTTTTCTTTGCTGCCTGAGTTTTTGTTTTGCTGGTGGATACATGAATATAGAGACAGAACTTGGTACTGATCCTTTAACAACTTCCCAGCCCCCCTTGTGAATTTTGGGTCACGGTTGAAAACTAATGACTGTTTGTTTCTTGGTTTCTCTCGGATGTGTAGCAAAGATATAGGACCAATTTTCAGGATTTTTGTTAGAGCCTGCTTGTGACTGTTGCAGATTACACATTGTTTAGTATCTGATTTTTGCTAATAATTTTGAGTTCATTGTGGATATTTTAGGCGTTGATTCGAATATTCTGTCAAGATACAGTTATTTACCACACCTATGAGGATAT

Coding sequence (CDS)

ATGGCGTCCATGGAAATTGACAGCGCTAATTCCAATGCTTCTGACCCTGATAATCCTAGATTTTCCATTAACGTATTGCAGCTCTTGAAATCTGCCCAGATGCAGCATGGGTTACGGCATGGAGATTATACTCGCTATCGGAGATATTGCACAGCTCGGCTAAGGAGGCTATATAAATCTCTGAAGTTCACTCATGGCCGTGGAAAGTACACCAAACGAGCCATAACTCAATCAACTGTTACTGAAGTCAGGTTTCTCCATGTGGTTCTTTATACGGCGGAGAGAGCATGGAGTCATGCCATGGAAAAAAGGCAATTACCAGATGGTCCAAATGCACGTCAGCGTATCTATTTGATTGGTAGGCTCAGAAAGGCAGTAAAATGGGCGACTCTCTTCGCACAATTGTGTGCAAGCAAGGGAGACTCGAGAACATCTTTGGAAGCAGAGGCTTATGCATCTTATATGACTGGGAACTTGTTGTTTGAACAAGATCGGAATTGGGACATAGCATTATTGAACTTCAAAAGATCTAGGTTGGTTAAGCTGACAGCAACAGGATCATTAAAGTTTCAGTGTGTAAGTGCAACTGAGGAAAAGGCTGTCATGTCGGAGGCCAGATCTCAGCAGGCTGTTTCCATGACCGAGTTTCATTGGCTTGGTCATAGGTTTCCAATATCCAATGCTAAAACTAGAGTTTCCATATTGAAAGCTCGGGAATTAGAAAAGGATTTGCAAGATTCAGCAGATTCACTTCCAGCAGAAAAAAGATTGACCATTTTTGATAAGATCTTTACAGCATACCATGAGGCAAGGAGCTCTATTCGCAGTGATCTGGTCAGCGCTGGAAATGCTGAAAATGTCAAAGATGATTTAAGTGGGCTTGATAAAGCTGTTAGTGCAGTGTTGGGTCAAAGGACAATTGAACGCAACCAGTTATTGGTGAAAATCGCAAAAAGTAAGCTTGTTAGGCGCCACGATGAAAAAAATGAGAAAGTTACCAAGCCGGAGGAACTTGTTCGCTTGTATGATCTTTTATTACAAAATATTGCTGACCTTTCTGATTTAGTCAGTTCGGGAAGAGATAGGAAGCCAGAAGAAGTGACATTTGCTGAAGAGTGTTCACTTAAAAGTATAGCTTTTCGTGGAGAAAGGTGCTTTTACTTGGCAAAATCATACAGTCTGGCTGGAAAAAGAGCTGAAGCTCATGTACTTTACTGCCATGCTCGCTCCCTTGTCGAAGATGCCATACAAAAATTCCGTTCGGAAAATATCAGTGACCCGAAGATTATCGAAGAGTTGAAGACATTGATTGACGAATGCAGAGCTAACAGTTGTATAGAGCATGCAACTGGAATTATTGAGGAGATTAAGGCTCCGGAGAATCTATCGAACAAGATCTCGAACATGTCATTAACTGGAGCAGAGAAGAAGCCGGTCAAATACCTCCTTCAGAGCCTCGACAACTATGAGTCTGCGATCGCCAATTCGAATACCAAGAGTGCTCCACGCATTGAAGCCTTTCCTCCCGCCTTTCAGGCGATCCCCCGGAATCCCATTGTTCTGGACCTTGCTTTTAACTTCATTGACTTCCCATCTCTTGAGAATAGAATGAAAAAGGACAGAAAGGGCTTTATCAGTAGGCTATGGGGATGA

Protein sequence

MASMEIDSANSNASDPDNPRFSINVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKSLKFTHGRGKYTKRAITQSTVTEVRFLHVVLYTAERAWSHAMEKRQLPDGPNARQRIYLIGRLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDRNWDIALLNFKRSRLVKLTATGSLKFQCVSATEEKAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVSILKARELEKDLQDSADSLPAEKRLTIFDKIFTAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQLLVKIAKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDRKPEEVTFAEECSLKSIAFRGERCFYLAKSYSLAGKRAEAHVLYCHARSLVEDAIQKFRSENISDPKIIEELKTLIDECRANSCIEHATGIIEEIKAPENLSNKISNMSLTGAEKKPVKYLLQSLDNYESAIANSNTKSAPRIEAFPPAFQAIPRNPIVLDLAFNFIDFPSLENRMKKDRKGFISRLWG

Homology

[Close]

BLAST of Cp4.1LG04g12320 vs. ExPASy Swiss-Prot
Match: Q00004 (Signal recognition particle subunit SRP68 OS=Canis lupus familiaris OX=9615 GN=SRP68 PE=1 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.9e-61
Identity = 181/610 (29.67%), Postives = 306/610 (50.16%), Query Frame = 0


Query: 5   EIDSANSNASDPDNPRFSINVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKSLKFT 64
           E  SA S A+       S+ +LQ++K +Q QHGLRHGD+ RYR YC+ R RRL K+L F 
Sbjct: 39  ERPSAGSKANREFGDSLSLEILQIIKESQQQHGLRHGDFQRYRGYCSRRQRRLRKTLNFK 98

Query: 65  HG-RGKYTKRAITQSTVTEVRFLHVVLYTAERAWSHAMEKRQLPDGPNARQRIYLIGRLR 124
            G R K+T + +T+  +T+ R+L +VL  AERAWS+AM+ +Q       R+R +L+ RLR
Sbjct: 99  MGNRHKFTGKKVTEDLLTDNRYLLLVLMDAERAWSYAMQLKQ-EANTEPRKRFHLLSRLR 158

Query: 125 KAVKWATLFAQLCAS-KGDSRTSLEAEAYASYMTGNLLFEQDRNWDIALLNFKRSRLV-K 184
           KAVK A    +LC S + D++T LEA+AY +Y++G L FE  + W  A+  F + + + +
Sbjct: 159 KAVKHAEELERLCESNRVDAKTKLEAQAYTAYLSGMLRFEH-QEWKAAIEAFNKCKTIYE 218

Query: 185 LTATGSLKFQCV-----------------------SATEE-------------------K 244
             A+   + Q V                       SA  E                   +
Sbjct: 219 KLASAFTEEQAVLYNQRVEEISPNIRYCAYNIGDQSAINELMQMRLRSGGTEGLLAEKLE 278

Query: 245 AVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVSILKARELEKDLQDSADSLPAEKRLTI 304
           A++++ R++QA +M+E  W G   P+   K R+ +L   + E  +   A+S   ++RL  
Sbjct: 279 ALITQTRAKQAATMSEVEWRGRTVPVKIDKVRIFLLGLADNEAAIA-QAESEETKERL-- 338

Query: 305 FDKIFTAYHEARSSIRSDL--------VSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQ 364
           F+ + +   +A  ++R +L         +         +L  L   ++ +     I RN+
Sbjct: 339 FESMLSECRDAIQAVREELKPDQKQRDYTLDGESGKVSNLQYLHSYLTYIKLSTAIRRNE 398

Query: 365 LLVKIAKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDRKPEEVTFAE 424
            + K  +  L ++ ++++++  +P++L+RLYD++LQN+ +L  L     DR      F +
Sbjct: 399 NMAKGLQKALQQQPEDESKRSPRPQDLIRLYDIILQNLVELLQLPGLEEDR-----AFQK 458

Query: 425 ECSLKSIAFRGERCFYLAKSYSLAGKRAEAHVLYCHARSLVEDAIQKFRSENISDP---- 484
           E  LK++ F+  RCF++A+SY L  K +EA VLY        D + K+ +E  SD     
Sbjct: 459 EIGLKTLVFKAYRCFFIAQSYVLVKKWSEALVLY--------DRVLKYANEVNSDAGAFR 518

Query: 485 ---KIIEELKTLIDECRANSCIEHATGIIEEIKAPENLSNKISNMSLTGAEKKPVKYLLQ 544
              K + +++ LI + R+  C   A  I++            S+   T ++ K  K L++
Sbjct: 519 NSLKDLPDVQELITQVRSEKCSLQAAAILDA---------SDSHQPETSSQVKDNKPLVE 578

Query: 545 SLDNYESAIANSNTKSAPRIEAFPPAFQAIPRNPIVLDLAFNFIDFPSLENRMKKDRK-- 551
             + +   +  S       +  FPP FQ IP  P+  DLA N + FP LE+++++  K  
Sbjct: 579 RFETF--CLDPSLVTKQANLVHFPPGFQPIPCKPLFFDLALNHVAFPPLEDKLEQKTKSG 619

[Close]

BLAST of Cp4.1LG04g12320 vs. ExPASy Swiss-Prot
Match: Q8BMA6 (Signal recognition particle subunit SRP68 OS=Mus musculus OX=10090 GN=Srp68 PE=1 SV=2)

HSP 1 Score: 235.7 bits (600), Expect = 1.2e-60
Identity = 180/604 (29.80%), Postives = 310/604 (51.32%), Query Frame = 0


Query: 5   EIDSANSNASDPDNPRFSINVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKSLKFT 64
           E  SA S A+       S+ +LQ++K +Q QHGLRHGD+ RYR YC+ R RRL K+L F 
Sbjct: 41  ERPSAGSKANKEFGDSLSLEILQIIKESQQQHGLRHGDFQRYRGYCSRRQRRLRKTLNFK 100

Query: 65  HG-RGKYTKRAITQSTVTEVRFLHVVLYTAERAWSHAMEKRQLPDGPNARQRIYLIGRLR 124
            G R K+T + +T+  +T+ R+L +VL  AERAWS+AM+ +Q       R+R +L+ RLR
Sbjct: 101 MGNRHKFTGKKVTEELLTDNRYLLLVLMDAERAWSYAMQLKQ-EANTEPRKRFHLLSRLR 160

Query: 125 KAVKWATLFAQLCAS-KGDSRTSLEAEAYASYMTGNLLFEQDRNWDIALLNFKRSRLV-K 184
           KAVK A    +LC S + D++T LEA+AY +Y++G L FE  + W  A+  F + + + +
Sbjct: 161 KAVKHAEELERLCESNRVDAKTKLEAQAYTAYLSGMLRFEH-QEWKSAIEAFNKCKTIYE 220

Query: 185 LTATGSLKFQCV-----------------------SATEE-------------------K 244
             A+   + Q V                       SA  E                   +
Sbjct: 221 KLASAFTEEQAVLYNQRVEEISPNIRYCAYNIGDQSAINELMQMRLRSGGTEGLLAEKLE 280

Query: 245 AVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVSILKARELEKDLQDSADSLPAEKRLTI 304
           A++++ R++QA +M+E  W G   P+   K R+ +L   + E  +   A+S   ++RL  
Sbjct: 281 ALITQTRAKQAATMSEVEWRGRTVPVKIDKVRIFLLGLADNEAAIV-QAESEETKERL-- 340

Query: 305 FDKIFTAYHEARSSIRSDLVS-------AGNAENVK-DDLSGLDKAVSAVLGQRTIERNQ 364
           F+ + +   +A  ++R +L         A + E+ K  +L  L   ++ +     I RN+
Sbjct: 341 FESMLSECRDALQAVREELKPDQKQRDYALDGESGKVSNLQYLHSYLTYIKLSTAIRRNE 400

Query: 365 LLVK-IAKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDRKPEEVTFA 424
            + K + ++ L ++ ++ +++  +P++L+RLYD++LQN+ +L  L     DR     TF 
Sbjct: 401 NMAKGLHRALLQQQPEDDSKRSPRPQDLIRLYDIILQNLVELLQLPGLEEDR-----TFQ 460

Query: 425 EECSLKSIAFRGERCFYLAKSYSLAGKRAEAHVLYCHARSLVEDAIQKFRSENISDPKII 484
           +E SLK++ F+  RCF++A+SY L  K +EA VLY        + +      + +  K +
Sbjct: 461 KEISLKTLVFKAYRCFFIAQSYVLVKKWSEALVLYDRVLKYANE-VSSHGGASKNSLKDL 520

Query: 485 EELKTLIDECRANSCIEHATGIIEEIKAPENLSNKISNMSLTGAEKKPVKYLLQSLDNYE 544
            +++ LI + R+  C   A  I++            S+ + T ++ K    L++  +++ 
Sbjct: 521 PDVQELITQVRSEKCSLQAAAILDA---------NDSHQTDTSSQVKDNTPLVERFESF- 580

Query: 545 SAIANSNTKSAPRIEAFPPAFQAIPRNPIVLDLAFNFIDFPSLENRMKKDRK----GFIS 551
             +  S       +  FPP FQ IP  P+  DLA N + FP LE+++++  K    G+I 
Sbjct: 581 -CLDPSLVTKQANLVHFPPGFQPIPCKPLFFDLALNHVAFPPLEDKLEQKTKSGLTGYIK 622

[Close]

BLAST of Cp4.1LG04g12320 vs. ExPASy Swiss-Prot
Match: Q9UHB9 (Signal recognition particle subunit SRP68 OS=Homo sapiens OX=9606 GN=SRP68 PE=1 SV=2)

HSP 1 Score: 235.0 bits (598), Expect = 2.1e-60
Identity = 181/612 (29.58%), Postives = 309/612 (50.49%), Query Frame = 0


Query: 5   EIDSANSNASDPDNPRFSINVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKSLKFT 64
           E  SA S A+       S+ +LQ++K +Q QHGLRHGD+ RYR YC+ R RRL K+L F 
Sbjct: 42  ERPSAGSKANKEFGDSLSLEILQIIKESQQQHGLRHGDFQRYRGYCSRRQRRLRKTLNFK 101

Query: 65  HG-RGKYTKRAITQSTVTEVRFLHVVLYTAERAWSHAMEKRQLPDGPNARQRIYLIGRLR 124
            G R K+T + +T+  +T+ R+L +VL  AERAWS+AM+ +Q       R+R +L+ RLR
Sbjct: 102 MGNRHKFTGKKVTEELLTDNRYLLLVLMDAERAWSYAMQLKQ-EANTEPRKRFHLLSRLR 161

Query: 125 KAVKWATLFAQLCAS-KGDSRTSLEAEAYASYMTGNLLFEQDRNWDIALLNFKRSRLV-K 184
           KAVK A    +LC S + D++T LEA+AY +Y++G L FE  + W  A+  F + + + +
Sbjct: 162 KAVKHAEELERLCESNRVDAKTKLEAQAYTAYLSGMLRFEH-QEWKAAIEAFNKCKTIYE 221

Query: 185 LTATGSLKFQCV-----------------------SATEE-------------------K 244
             A+   + Q V                       SA  E                   +
Sbjct: 222 KLASAFTEEQAVLYNQRVEEISPNIRYCAYNIGDQSAINELMQMRLRSGGTEGLLAEKLE 281

Query: 245 AVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVSILKARELEKDLQDSADSLPAEKRLTI 304
           A++++ R++QA +M+E  W G   P+   K R+ +L   + E  +   A+S   ++RL  
Sbjct: 282 ALITQTRAKQAATMSEVEWRGRTVPVKIDKVRIFLLGLADNEAAIV-QAESEETKERL-- 341

Query: 305 FDKIFTAYHEARSSIRSDL---------VSAGNAENVKDDLSGLDKAVSAVLGQRTIERN 364
           F+ + +   +A   +R +L         +  G    V  +L  L   ++ +     I+RN
Sbjct: 342 FESMLSECRDAIQVVREELKPDQKQRDYILEGEPGKV-SNLQYLHSYLTYIKLSTAIKRN 401

Query: 365 QLLVK-IAKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDRKPEEVTF 424
           + + K + ++ L ++ ++ +++  +P++L+RLYD++LQN+ +L  L     D+      F
Sbjct: 402 ENMAKGLQRALLQQQPEDDSKRSPRPQDLIRLYDIILQNLVELLQLPGLEEDK-----AF 461

Query: 425 AEECSLKSIAFRGERCFYLAKSYSLAGKRAEAHVLYCHARSLVEDAIQKFRSENISDP-- 484
            +E  LK++ F+  RCF++A+SY L  K +EA VLY        D + K+ +E  SD   
Sbjct: 462 QKEIGLKTLVFKAYRCFFIAQSYVLVKKWSEALVLY--------DRVLKYANEVNSDAGA 521

Query: 485 -----KIIEELKTLIDECRANSCIEHATGIIEEIKAPENLSNKISNMSLTGAEKKPVKYL 544
                K + +++ LI + R+  C   A  I++        +N       + ++ K  K L
Sbjct: 522 FKNSLKDLPDVQELITQVRSEKCSLQAAAILD--------ANDAHQTETSSSQVKDNKPL 581

Query: 545 LQSLDNYESAIANSNTKSAPRIEAFPPAFQAIPRNPIVLDLAFNFIDFPSLENRMKKDRK 551
           ++  + +   +  S       +  FPP FQ IP  P+  DLA N + FP LE+++++  K
Sbjct: 582 VERFETF--CLDPSLVTKQANLVHFPPGFQPIPCKPLFFDLALNHVAFPPLEDKLEQKTK 624

[Close]

BLAST of Cp4.1LG04g12320 vs. ExPASy Swiss-Prot
Match: Q9VSS2 (Signal recognition particle subunit SRP68 OS=Drosophila melanogaster OX=7227 GN=Srp68 PE=2 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.8e-49
Identity = 154/579 (26.60%), Postives = 281/579 (48.53%), Query Frame = 0


Query: 21  FSINVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKSLKFTHGRGKYTKRA-ITQST 80
           F++ +L ++K AQ QHGLRHGD+ RYR YC+ R+RRL K+LK+  G  ++ KR  +T   
Sbjct: 29  FTVEILHMIKDAQQQHGLRHGDFQRYRGYCSRRIRRLRKALKYPQGDKRHFKRRDVTIGQ 88

Query: 81  VT----EVRFLHVVLYTAERAWSHAMEKRQLPDGPNARQRIYLIGRLRKAVKWATLFAQL 140
           +T    + RF+H+ L  AERAW++AM+ +Q       R+R +L+ +LR+A  +A    +L
Sbjct: 89  LTGKKADERFIHIPLICAERAWAYAMQLKQ-ESNTEPRKRFHLVNKLRRACFYALQLQEL 148

Query: 141 CASKG-DSRTSLEAEAYASYMTGNLLFEQDRNWDIALLNFKRSRLV-------------- 200
           C ++  D+RT LE EAY ++M G L FE  + W  A  + KR+++V              
Sbjct: 149 CNTEAFDARTKLECEAYVAWMHGTLHFEL-QLWKTAGEHLKRAQVVYENLGKALPEDEQE 208

Query: 201 ---------------------------KLTATGSLKFQCVSATEEKAVMSEARSQQAVSM 260
                                      K+     L+ Q V    +  ++S+ +++ +  +
Sbjct: 209 LYRAKVNEFTPNLRYCAYNISGGASGGKIDEILELRAQGVLENLD-VLVSQTKTESSEGL 268

Query: 261 TEFHWLGHRFPISNAKTRVSILKARELEKDLQDSADSLPAEKRLTIFDKIFTAYHEARSS 320
               W G +  +   K R+ +L A+EL+K L   A +   + ++ + ++I     +A  +
Sbjct: 269 QTIDWRGRKVTVRPEKVRLFLLSAQELDKSL---AKTTKQDAKIELIERILMDCKDAIQA 328

Query: 321 IRSDLVSAGNAENVK--DDLSGLD---KAVSAVLGQRTIERNQLLVKIAK-----SKLVR 380
           +R ++       ++     +SG+      +S +   RT++RN  LV+ AK       L  
Sbjct: 329 VRDEIKQDPKLRSLTTGQTVSGVQYLLAYLSYIRHSRTLQRNLCLVEQAKLNFYDPNLQS 388

Query: 381 RHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDRKPEEVTFAEECSLKSIAFRGE 440
           + +  + K  +P++L RLY+++LQN+ ++  +     +   ++ T+  E    +I F+  
Sbjct: 389 QQNVGDGKRVRPQDLARLYEIILQNVTEMQQI-----NGLEDDATYQSEVENLAITFKAF 448

Query: 441 RCFYLAKSYSLAGKRAEAHVLYCHARSLVEDAIQKFRSENISDPKIIEELKTLIDECRAN 500
           RC+Y+A +     K  EA  LY  A +   +A++   S      + ++++ + ID C+ +
Sbjct: 449 RCYYIALTLIDIKKWKEAVALYERASNYATEALKGKSSPEFQLQEELKKVVSAIDGCKFS 508

Query: 501 SCIEHATGIIEEIKAPENLSNKISNMSLTGAEKKPVKYLLQSLDNYESAIANSNTKSAPR 543
           +   HA  ++E+  + E+          T   +K  K L + L  Y+     S    AP 
Sbjct: 509 A---HAYSVLEDDNSEES--------GTTTKSQKTTKPLYERLSLYKE--DQSLHTKAPN 568

[Close]

BLAST of Cp4.1LG04g12320 vs. ExPASy Swiss-Prot
Match: Q20822 (Probable signal recognition particle subunit SRP68 OS=Caenorhabditis elegans OX=6239 GN=srpa-68 PE=3 SV=2)

HSP 1 Score: 171.8 bits (434), Expect = 2.2e-41
Identity = 145/584 (24.83%), Postives = 271/584 (46.40%), Query Frame = 0


Query: 22  SINVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKSLKFTHG-------RGKYTKRA 81
           ++++LQ++K AQ QHGLRHGDY RYR+YC A+L R+ K+LKFT+        + K+ K+ 
Sbjct: 19  TVHILQVVKDAQQQHGLRHGDYARYRKYCAAKLERMRKALKFTNSHNCQKKRKAKFVKKW 78

Query: 82  ITQSTVTEVRFLHVVLYTAERAWSHAM-EKRQLPDGP-NARQRIYLIGRLRKAVKWATLF 141
           ++  +V  V+FL+  ++ +ER ++ AM +K  L D P  +R++  +I  LRKAV  AT  
Sbjct: 79  LSVESVQNVQFLNFGIFESERRYAEAMIDKITLEDNPEKSRKKFSMINSLRKAVLHATNL 138

Query: 142 AQLC--ASKGDSRTSLEAEAYASYMTGNLLFEQDRNWDIALLNFKRSRLV---------K 201
            ++   + + D+ T LEA+AYA++M G   FE  RNW  A  + K ++ V          
Sbjct: 139 EKIVQESERFDAPTKLEAQAYAAWMRGMCSFE-SRNWQKASESLKLAKTVYEKLAEATNN 198

Query: 202 LTATGSLKFQC-------------------------------------VSATEEKAVMSE 261
            T +   K +C                                       ++ +K +   
Sbjct: 199 TTLSSIFKGRCREIQPQLRLCEFNIAESPGAVGTMTELMELRMQMGEGGDSSVDKLISEM 258

Query: 262 ARSQQAVSMTEFHWLGHRFPISNAKTRVSILKARELEKDLQDSADSLPAEKRLTIFDKIF 321
             S  +  +    W G +  + + K +  + + ++ E +L   A     ++++ +F+K  
Sbjct: 259 RASATSAEVVTIEWGGAKSTVDDEKAKQVVQEWKQTEVEL---AQCQTPKEKMALFEKAT 318

Query: 322 TAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQLLVKIAKSKLVRR 381
               +A   I SD++   ++EN    +    KA    L         L +          
Sbjct: 319 ADTRDAIDRI-SDIIRRKSSENADTTVLQSIKAYLEFLKMNGTASRYLAI---------I 378

Query: 382 HDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDRKPEEVTFAEECSLKSIAFRGER 441
            + K+EK +KP++L+RLYD +++   +++++  +  D+        +   +K   +R  R
Sbjct: 379 DNTKSEKKSKPQDLLRLYDSVIEIYKEVAEIPGADHDK-----NLIQAFEVKVEYYRAFR 438

Query: 442 CFYLAKSYSLAGKRAEAHVLYCHARSLVEDA---IQKFRSENI---SDPKIIEELKTLID 501
           CFY+A SYS   K +EA  L+    S V+DA   ++K +S +         + EL++ ++
Sbjct: 439 CFYMASSYSALHKYSEAAALFDRTVSRVQDAEGKLKKLKSSSFITNETQSSLNELRSEVE 498

Query: 502 ECRANSCIEHATGIIEEIKAPENLSNKISNMSLTGAEKKPVKYLLQSLDNYESAIANSNT 543
             +             ++K    L+  I        +K+P+   +     ++   +  + 
Sbjct: 499 SAKVTVRAARLASAAGDVKTDSELAKII--------DKRPLLETVNEWRQWDVRNSLKDK 558

[Close]

BLAST of Cp4.1LG04g12320 vs. NCBI nr
Match: XP_023531771.1 (signal recognition particle subunit SRP68-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1015 bits (2625), Expect = 0.0
Identity = 537/594 (90.40%), Postives = 540/594 (90.91%), Query Frame = 0


Query: 1   MASMEIDSANSNASDPDNPRFSINVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKS 60
           MASMEIDSANSNASDPDNPRFSINVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKS
Sbjct: 1   MASMEIDSANSNASDPDNPRFSINVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKS 60

Query: 61  LKFTHGRGKYTKRAITQSTVTEVRFLHVVLYTAERAWSHAMEKRQLPDGPNARQRIYLIG 120
           LKFTHGRGKYTKRAITQSTVTEVRFLHVVLYTAERAWSHAMEKRQLPDGPNARQRIYLIG
Sbjct: 61  LKFTHGRGKYTKRAITQSTVTEVRFLHVVLYTAERAWSHAMEKRQLPDGPNARQRIYLIG 120

Query: 121 RLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDRNWDIALLNFKRSRLV 180
           RLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDRNWDIALLNFKRSR V
Sbjct: 121 RLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDRNWDIALLNFKRSRAV 180

Query: 181 --KLTATGSLKFQ--CVSATEE-------------------------------------- 240
             +L   G L+ Q  C    EE                                      
Sbjct: 181 YEELGKVGDLENQVLCRERVEELEPSIRYCLHKIGKSNIQASELLHIGEMEGPALDLFKA 240

Query: 241 --KAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVSILKARELEKDLQDSADSLPAEKR 300
             +AVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVSILKARELEKDLQDSADSLPAEKR
Sbjct: 241 KLEAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVSILKARELEKDLQDSADSLPAEKR 300

Query: 301 LTIFDKIFTAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQLLVKI 360
           LTIFDKIFTAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQLLVKI
Sbjct: 301 LTIFDKIFTAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQLLVKI 360

Query: 361 AKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDRKPEEVTFAEECSLK 420
           AKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDRKPEEVTFAEECSLK
Sbjct: 361 AKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDRKPEEVTFAEECSLK 420

Query: 421 SIAFRGERCFYLAKSYSLAGKRAEAHVLYCHARSLVEDAIQKFRSENISDPKIIEELKTL 480
           SIAFRGERCFYLAKSYSLAGKRAEAHVLYCHARSLVEDAIQKFRSENISDPKIIEELKTL
Sbjct: 421 SIAFRGERCFYLAKSYSLAGKRAEAHVLYCHARSLVEDAIQKFRSENISDPKIIEELKTL 480

Query: 481 IDECRANSCIEHATGIIEEIKAPENLSNKISNMSLTGAEKKPVKYLLQSLDNYESAIANS 540
           IDECRANSCIEHATGIIEEIKAPENLSNKISNMSLTGAEKKPVKYLLQSLDNYESAIANS
Sbjct: 481 IDECRANSCIEHATGIIEEIKAPENLSNKISNMSLTGAEKKPVKYLLQSLDNYESAIANS 540

Query: 541 NTKSAPRIEAFPPAFQAIPRNPIVLDLAFNFIDFPSLENRMKKDRKGFISRLWG 550
           NTKSAPRIEAFPPAFQAIPRNPIVLDLAFNFIDFPSLENRMKKDRKGFISRLWG
Sbjct: 541 NTKSAPRIEAFPPAFQAIPRNPIVLDLAFNFIDFPSLENRMKKDRKGFISRLWG 594

[Close]

BLAST of Cp4.1LG04g12320 vs. NCBI nr
Match: XP_022933752.1 (signal recognition particle subunit SRP68-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 1011 bits (2614), Expect = 0.0
Identity = 534/594 (89.90%), Postives = 539/594 (90.74%), Query Frame = 0


Query: 1   MASMEIDSANSNASDPDNPRFSINVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKS 60
           MASMEIDSANSNASDPDNPRFSINVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKS
Sbjct: 1   MASMEIDSANSNASDPDNPRFSINVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKS 60

Query: 61  LKFTHGRGKYTKRAITQSTVTEVRFLHVVLYTAERAWSHAMEKRQLPDGPNARQRIYLIG 120
           LKFTHGRGKYTKRAITQSTVTEVRFLHVVLYTAERAWSHAMEKRQLPDGPNARQRIYLIG
Sbjct: 61  LKFTHGRGKYTKRAITQSTVTEVRFLHVVLYTAERAWSHAMEKRQLPDGPNARQRIYLIG 120

Query: 121 RLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDRNWDIALLNFKRSRLV 180
           RLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDRNWDIALLNFKRSR V
Sbjct: 121 RLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDRNWDIALLNFKRSRAV 180

Query: 181 --KLTATGSLKFQ--CVSATEE-------------------------------------- 240
             +L   G L+ Q  C    EE                                      
Sbjct: 181 YEELGKVGDLENQVLCRERVEELEPSIRYCLHKIGKSNIQASELLHIGEMEGPALDLFKA 240

Query: 241 --KAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVSILKARELEKDLQDSADSLPAEKR 300
             +AVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVSILKARELEKDLQDSADSLPAEKR
Sbjct: 241 KLEAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVSILKARELEKDLQDSADSLPAEKR 300

Query: 301 LTIFDKIFTAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQLLVKI 360
           LTIFDKIFTAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQLLVKI
Sbjct: 301 LTIFDKIFTAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQLLVKI 360

Query: 361 AKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDRKPEEVTFAEECSLK 420
           AKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDRKPEEVTFAEECSLK
Sbjct: 361 AKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDRKPEEVTFAEECSLK 420

Query: 421 SIAFRGERCFYLAKSYSLAGKRAEAHVLYCHARSLVEDAIQKFRSENISDPKIIEELKTL 480
           SIAFRGERCFYLAKSYSLAGKRAEAHVLYCHARSLVEDAIQKFRSENISDPKIIEELKTL
Sbjct: 421 SIAFRGERCFYLAKSYSLAGKRAEAHVLYCHARSLVEDAIQKFRSENISDPKIIEELKTL 480

Query: 481 IDECRANSCIEHATGIIEEIKAPENLSNKISNMSLTGAEKKPVKYLLQSLDNYESAIANS 540
           I+ECRANSCIEHATGI+EEIKAPENLSNKISNMSLTGAEKKPVKYLLQSLDNYES IANS
Sbjct: 481 IEECRANSCIEHATGIMEEIKAPENLSNKISNMSLTGAEKKPVKYLLQSLDNYESVIANS 540

Query: 541 NTKSAPRIEAFPPAFQAIPRNPIVLDLAFNFIDFPSLENRMKKDRKGFISRLWG 550
           NTKSAPRIEAFPPAFQAIPRNPIVLDLAFNFIDFPSLENRMKKDRKGFISRLWG
Sbjct: 541 NTKSAPRIEAFPPAFQAIPRNPIVLDLAFNFIDFPSLENRMKKDRKGFISRLWG 594

[Close]

BLAST of Cp4.1LG04g12320 vs. NCBI nr
Match: XP_022965811.1 (signal recognition particle subunit SRP68-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 1011 bits (2613), Expect = 0.0
Identity = 534/594 (89.90%), Postives = 540/594 (90.91%), Query Frame = 0


Query: 1   MASMEIDSANSNASDPDNPRFSINVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKS 60
           MASMEIDSA+SNASDPDNPRFSINVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKS
Sbjct: 1   MASMEIDSASSNASDPDNPRFSINVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKS 60

Query: 61  LKFTHGRGKYTKRAITQSTVTEVRFLHVVLYTAERAWSHAMEKRQLPDGPNARQRIYLIG 120
           LKFTHGRGKYTKRAITQSTVTEVRFLHVVLYTAERAWSHAMEKRQLPDGPNARQRIYLIG
Sbjct: 61  LKFTHGRGKYTKRAITQSTVTEVRFLHVVLYTAERAWSHAMEKRQLPDGPNARQRIYLIG 120

Query: 121 RLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDRNWDIALLNFKRSRLV 180
           RLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDRNWDIALLNFKRSR V
Sbjct: 121 RLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDRNWDIALLNFKRSRAV 180

Query: 181 --KLTATGSLKFQ--CVSATEE-------------------------------------- 240
             +L   G L+ Q  C    EE                                      
Sbjct: 181 YEELGKVGDLENQVLCRERVEELEPSIRYCLHKIGKSNIQASELLHIGEMEGPALDLFKA 240

Query: 241 --KAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVSILKARELEKDLQDSADSLPAEKR 300
             +AVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVSILKARELEKDLQDSADSLPAEKR
Sbjct: 241 KLEAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVSILKARELEKDLQDSADSLPAEKR 300

Query: 301 LTIFDKIFTAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQLLVKI 360
           LTIFDKIFTAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSA+LGQRTIERNQLLVKI
Sbjct: 301 LTIFDKIFTAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAMLGQRTIERNQLLVKI 360

Query: 361 AKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDRKPEEVTFAEECSLK 420
           AKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDRKPEEVTFAEECSLK
Sbjct: 361 AKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDRKPEEVTFAEECSLK 420

Query: 421 SIAFRGERCFYLAKSYSLAGKRAEAHVLYCHARSLVEDAIQKFRSENISDPKIIEELKTL 480
           SIAFRGERCFYLAKSYSLAGKRAEAHVLYCHARSLVEDAIQKFRSENISDPKIIEELKTL
Sbjct: 421 SIAFRGERCFYLAKSYSLAGKRAEAHVLYCHARSLVEDAIQKFRSENISDPKIIEELKTL 480

Query: 481 IDECRANSCIEHATGIIEEIKAPENLSNKISNMSLTGAEKKPVKYLLQSLDNYESAIANS 540
           I+ECRANSCIEHATGIIEEIKAPENLSNKISNMSLTGAEKKPVKYLLQSLDNYESAIANS
Sbjct: 481 IEECRANSCIEHATGIIEEIKAPENLSNKISNMSLTGAEKKPVKYLLQSLDNYESAIANS 540

Query: 541 NTKSAPRIEAFPPAFQAIPRNPIVLDLAFNFIDFPSLENRMKKDRKGFISRLWG 550
           NTKSAPRIEAFPPAFQAIPRNPIVLDLAFNFIDFPSLENRMKKDRKGFISRLWG
Sbjct: 541 NTKSAPRIEAFPPAFQAIPRNPIVLDLAFNFIDFPSLENRMKKDRKGFISRLWG 594

[Close]

BLAST of Cp4.1LG04g12320 vs. NCBI nr
Match: XP_023531772.1 (signal recognition particle subunit SRP68-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1009 bits (2608), Expect = 0.0
Identity = 536/594 (90.24%), Postives = 539/594 (90.74%), Query Frame = 0


Query: 1   MASMEIDSANSNASDPDNPRFSINVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKS 60
           MASMEIDSANSNASDPDNPRFSINVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKS
Sbjct: 1   MASMEIDSANSNASDPDNPRFSINVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKS 60

Query: 61  LKFTHGRGKYTKRAITQSTVTEVRFLHVVLYTAERAWSHAMEKRQLPDGPNARQRIYLIG 120
           LKFTHGRGKYTKRAITQSTVTEVRFLHVVLYTAERAWSHAMEKRQLPDGPNARQRIYLIG
Sbjct: 61  LKFTHGRGKYTKRAITQSTVTEVRFLHVVLYTAERAWSHAMEKRQLPDGPNARQRIYLIG 120

Query: 121 RLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDRNWDIALLNFKRSRLV 180
           RLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDRNWDIALLNFKRSR V
Sbjct: 121 RLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDRNWDIALLNFKRSRAV 180

Query: 181 --KLTATGSLKFQ--CVSATEE-------------------------------------- 240
             +L   G L+ Q  C    EE                                      
Sbjct: 181 YEELGKVGDLENQVLCRERVEELEPSIRYCLHKIGKSNIQASELLHIGEMEGPALDLFKA 240

Query: 241 --KAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVSILKARELEKDLQDSADSLPAEKR 300
             +AVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVSILKARELEKDLQDSADSLPAEKR
Sbjct: 241 KLEAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVSILKARELEKDLQDSADSLPAEKR 300

Query: 301 LTIFDKIFTAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQLLVKI 360
           LTIFDKIFTAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQLLVKI
Sbjct: 301 LTIFDKIFTAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQLLVKI 360

Query: 361 AKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDRKPEEVTFAEECSLK 420
           AKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDRKPEEVTFAEECSLK
Sbjct: 361 AKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDRKPEEVTFAEECSLK 420

Query: 421 SIAFRGERCFYLAKSYSLAGKRAEAHVLYCHARSLVEDAIQKFRSENISDPKIIEELKTL 480
           SIAFRGERCFYLAKSYSLAGKRAEAHVLYCHARSLVEDAIQKFRSENISDP IIEELKTL
Sbjct: 421 SIAFRGERCFYLAKSYSLAGKRAEAHVLYCHARSLVEDAIQKFRSENISDP-IIEELKTL 480

Query: 481 IDECRANSCIEHATGIIEEIKAPENLSNKISNMSLTGAEKKPVKYLLQSLDNYESAIANS 540
           IDECRANSCIEHATGIIEEIKAPENLSNKISNMSLTGAEKKPVKYLLQSLDNYESAIANS
Sbjct: 481 IDECRANSCIEHATGIIEEIKAPENLSNKISNMSLTGAEKKPVKYLLQSLDNYESAIANS 540

Query: 541 NTKSAPRIEAFPPAFQAIPRNPIVLDLAFNFIDFPSLENRMKKDRKGFISRLWG 550
           NTKSAPRIEAFPPAFQAIPRNPIVLDLAFNFIDFPSLENRMKKDRKGFISRLWG
Sbjct: 541 NTKSAPRIEAFPPAFQAIPRNPIVLDLAFNFIDFPSLENRMKKDRKGFISRLWG 593

[Close]

BLAST of Cp4.1LG04g12320 vs. NCBI nr
Match: KAG6588218.1 (Signal recognition particle subunit SRP68, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1007 bits (2604), Expect = 0.0
Identity = 535/594 (90.07%), Postives = 539/594 (90.74%), Query Frame = 0


Query: 1   MASMEIDSANSNASDPDNPRFSINVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKS 60
           MASMEIDSANSNASDPDNPRFSINVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKS
Sbjct: 215 MASMEIDSANSNASDPDNPRFSINVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKS 274

Query: 61  LKFTHGRGKYTKRAITQSTVTEVRFLHVVLYTAERAWSHAMEKRQLPDGPNARQRIYLIG 120
           LKFTHGRGKYTKRAITQSTVTEVRFLHVVLYTAERAWSHAMEKRQLPDGPNARQRIYLIG
Sbjct: 275 LKFTHGRGKYTKRAITQSTVTEVRFLHVVLYTAERAWSHAMEKRQLPDGPNARQRIYLIG 334

Query: 121 RLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDRNWDIALLNFKRSRLV 180
           RLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDRNWDIALLNFKRSR V
Sbjct: 335 RLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDRNWDIALLNFKRSRAV 394

Query: 181 --KLTATGSLKFQ--CVSATEE-------------------------------------- 240
             +L   G L+ Q  C    EE                                      
Sbjct: 395 YEELGKVGDLENQVLCRERVEELEPSIRYCLHKIGKSNIQASELLHIGEMEGPALDLFKA 454

Query: 241 --KAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVSILKARELEKDLQDSADSLPAEKR 300
             +AVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVSILKARELEKDLQDSADSLPAEKR
Sbjct: 455 KLEAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVSILKARELEKDLQDSADSLPAEKR 514

Query: 301 LTIFDKIFTAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQLLVKI 360
           LTIFDKIFTAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQLLVKI
Sbjct: 515 LTIFDKIFTAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQLLVKI 574

Query: 361 AKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDRKPEEVTFAEECSLK 420
           AKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDRKPEEVTFAEECSLK
Sbjct: 575 AKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDRKPEEVTFAEECSLK 634

Query: 421 SIAFRGERCFYLAKSYSLAGKRAEAHVLYCHARSLVEDAIQKFRSENISDPKIIEELKTL 480
           SIAFRGERCFYLAKSYSLAGKRAEAHVLYCHARSLVEDAIQKFRSENISDP IIEELKTL
Sbjct: 635 SIAFRGERCFYLAKSYSLAGKRAEAHVLYCHARSLVEDAIQKFRSENISDP-IIEELKTL 694

Query: 481 IDECRANSCIEHATGIIEEIKAPENLSNKISNMSLTGAEKKPVKYLLQSLDNYESAIANS 540
           I+ECRANSCIEHATGIIEEIKAPENLSNKISNMSLTGAEKKPVKYLLQSLDNYESAIANS
Sbjct: 695 IEECRANSCIEHATGIIEEIKAPENLSNKISNMSLTGAEKKPVKYLLQSLDNYESAIANS 754

Query: 541 NTKSAPRIEAFPPAFQAIPRNPIVLDLAFNFIDFPSLENRMKKDRKGFISRLWG 550
           NTKSAPRIEAFPPAFQAIPRNPIVLDLAFNFIDFPSLENRMKKDRKGFISRLWG
Sbjct: 755 NTKSAPRIEAFPPAFQAIPRNPIVLDLAFNFIDFPSLENRMKKDRKGFISRLWG 807

[Close]

BLAST of Cp4.1LG04g12320 vs. ExPASy TrEMBL
Match: A0A6J1F0Q1 (Signal recognition particle subunit SRP68 OS=Cucurbita moschata OX=3662 GN=LOC111441075 PE=3 SV=1)

HSP 1 Score: 1011 bits (2614), Expect = 0.0
Identity = 534/594 (89.90%), Postives = 539/594 (90.74%), Query Frame = 0


Query: 1   MASMEIDSANSNASDPDNPRFSINVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKS 60
           MASMEIDSANSNASDPDNPRFSINVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKS
Sbjct: 1   MASMEIDSANSNASDPDNPRFSINVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKS 60

Query: 61  LKFTHGRGKYTKRAITQSTVTEVRFLHVVLYTAERAWSHAMEKRQLPDGPNARQRIYLIG 120
           LKFTHGRGKYTKRAITQSTVTEVRFLHVVLYTAERAWSHAMEKRQLPDGPNARQRIYLIG
Sbjct: 61  LKFTHGRGKYTKRAITQSTVTEVRFLHVVLYTAERAWSHAMEKRQLPDGPNARQRIYLIG 120

Query: 121 RLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDRNWDIALLNFKRSRLV 180
           RLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDRNWDIALLNFKRSR V
Sbjct: 121 RLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDRNWDIALLNFKRSRAV 180

Query: 181 --KLTATGSLKFQ--CVSATEE-------------------------------------- 240
             +L   G L+ Q  C    EE                                      
Sbjct: 181 YEELGKVGDLENQVLCRERVEELEPSIRYCLHKIGKSNIQASELLHIGEMEGPALDLFKA 240

Query: 241 --KAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVSILKARELEKDLQDSADSLPAEKR 300
             +AVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVSILKARELEKDLQDSADSLPAEKR
Sbjct: 241 KLEAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVSILKARELEKDLQDSADSLPAEKR 300

Query: 301 LTIFDKIFTAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQLLVKI 360
           LTIFDKIFTAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQLLVKI
Sbjct: 301 LTIFDKIFTAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQLLVKI 360

Query: 361 AKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDRKPEEVTFAEECSLK 420
           AKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDRKPEEVTFAEECSLK
Sbjct: 361 AKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDRKPEEVTFAEECSLK 420

Query: 421 SIAFRGERCFYLAKSYSLAGKRAEAHVLYCHARSLVEDAIQKFRSENISDPKIIEELKTL 480
           SIAFRGERCFYLAKSYSLAGKRAEAHVLYCHARSLVEDAIQKFRSENISDPKIIEELKTL
Sbjct: 421 SIAFRGERCFYLAKSYSLAGKRAEAHVLYCHARSLVEDAIQKFRSENISDPKIIEELKTL 480

Query: 481 IDECRANSCIEHATGIIEEIKAPENLSNKISNMSLTGAEKKPVKYLLQSLDNYESAIANS 540
           I+ECRANSCIEHATGI+EEIKAPENLSNKISNMSLTGAEKKPVKYLLQSLDNYES IANS
Sbjct: 481 IEECRANSCIEHATGIMEEIKAPENLSNKISNMSLTGAEKKPVKYLLQSLDNYESVIANS 540

Query: 541 NTKSAPRIEAFPPAFQAIPRNPIVLDLAFNFIDFPSLENRMKKDRKGFISRLWG 550
           NTKSAPRIEAFPPAFQAIPRNPIVLDLAFNFIDFPSLENRMKKDRKGFISRLWG
Sbjct: 541 NTKSAPRIEAFPPAFQAIPRNPIVLDLAFNFIDFPSLENRMKKDRKGFISRLWG 594

[Close]

BLAST of Cp4.1LG04g12320 vs. ExPASy TrEMBL
Match: A0A6J1HMP5 (Signal recognition particle subunit SRP68 OS=Cucurbita maxima OX=3661 GN=LOC111465584 PE=3 SV=1)

HSP 1 Score: 1011 bits (2613), Expect = 0.0
Identity = 534/594 (89.90%), Postives = 540/594 (90.91%), Query Frame = 0


Query: 1   MASMEIDSANSNASDPDNPRFSINVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKS 60
           MASMEIDSA+SNASDPDNPRFSINVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKS
Sbjct: 1   MASMEIDSASSNASDPDNPRFSINVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKS 60

Query: 61  LKFTHGRGKYTKRAITQSTVTEVRFLHVVLYTAERAWSHAMEKRQLPDGPNARQRIYLIG 120
           LKFTHGRGKYTKRAITQSTVTEVRFLHVVLYTAERAWSHAMEKRQLPDGPNARQRIYLIG
Sbjct: 61  LKFTHGRGKYTKRAITQSTVTEVRFLHVVLYTAERAWSHAMEKRQLPDGPNARQRIYLIG 120

Query: 121 RLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDRNWDIALLNFKRSRLV 180
           RLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDRNWDIALLNFKRSR V
Sbjct: 121 RLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDRNWDIALLNFKRSRAV 180

Query: 181 --KLTATGSLKFQ--CVSATEE-------------------------------------- 240
             +L   G L+ Q  C    EE                                      
Sbjct: 181 YEELGKVGDLENQVLCRERVEELEPSIRYCLHKIGKSNIQASELLHIGEMEGPALDLFKA 240

Query: 241 --KAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVSILKARELEKDLQDSADSLPAEKR 300
             +AVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVSILKARELEKDLQDSADSLPAEKR
Sbjct: 241 KLEAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVSILKARELEKDLQDSADSLPAEKR 300

Query: 301 LTIFDKIFTAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQLLVKI 360
           LTIFDKIFTAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSA+LGQRTIERNQLLVKI
Sbjct: 301 LTIFDKIFTAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAMLGQRTIERNQLLVKI 360

Query: 361 AKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDRKPEEVTFAEECSLK 420
           AKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDRKPEEVTFAEECSLK
Sbjct: 361 AKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDRKPEEVTFAEECSLK 420

Query: 421 SIAFRGERCFYLAKSYSLAGKRAEAHVLYCHARSLVEDAIQKFRSENISDPKIIEELKTL 480
           SIAFRGERCFYLAKSYSLAGKRAEAHVLYCHARSLVEDAIQKFRSENISDPKIIEELKTL
Sbjct: 421 SIAFRGERCFYLAKSYSLAGKRAEAHVLYCHARSLVEDAIQKFRSENISDPKIIEELKTL 480

Query: 481 IDECRANSCIEHATGIIEEIKAPENLSNKISNMSLTGAEKKPVKYLLQSLDNYESAIANS 540
           I+ECRANSCIEHATGIIEEIKAPENLSNKISNMSLTGAEKKPVKYLLQSLDNYESAIANS
Sbjct: 481 IEECRANSCIEHATGIIEEIKAPENLSNKISNMSLTGAEKKPVKYLLQSLDNYESAIANS 540

Query: 541 NTKSAPRIEAFPPAFQAIPRNPIVLDLAFNFIDFPSLENRMKKDRKGFISRLWG 550
           NTKSAPRIEAFPPAFQAIPRNPIVLDLAFNFIDFPSLENRMKKDRKGFISRLWG
Sbjct: 541 NTKSAPRIEAFPPAFQAIPRNPIVLDLAFNFIDFPSLENRMKKDRKGFISRLWG 594

[Close]

BLAST of Cp4.1LG04g12320 vs. ExPASy TrEMBL
Match: A0A6J1F5Q6 (Signal recognition particle subunit SRP68 OS=Cucurbita moschata OX=3662 GN=LOC111441075 PE=3 SV=1)

HSP 1 Score: 1004 bits (2597), Expect = 0.0
Identity = 533/594 (89.73%), Postives = 538/594 (90.57%), Query Frame = 0


Query: 1   MASMEIDSANSNASDPDNPRFSINVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKS 60
           MASMEIDSANSNASDPDNPRFSINVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKS
Sbjct: 1   MASMEIDSANSNASDPDNPRFSINVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKS 60

Query: 61  LKFTHGRGKYTKRAITQSTVTEVRFLHVVLYTAERAWSHAMEKRQLPDGPNARQRIYLIG 120
           LKFTHGRGKYTKRAITQSTVTEVRFLHVVLYTAERAWSHAMEKRQLPDGPNARQRIYLIG
Sbjct: 61  LKFTHGRGKYTKRAITQSTVTEVRFLHVVLYTAERAWSHAMEKRQLPDGPNARQRIYLIG 120

Query: 121 RLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDRNWDIALLNFKRSRLV 180
           RLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDRNWDIALLNFKRSR V
Sbjct: 121 RLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDRNWDIALLNFKRSRAV 180

Query: 181 --KLTATGSLKFQ--CVSATEE-------------------------------------- 240
             +L   G L+ Q  C    EE                                      
Sbjct: 181 YEELGKVGDLENQVLCRERVEELEPSIRYCLHKIGKSNIQASELLHIGEMEGPALDLFKA 240

Query: 241 --KAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVSILKARELEKDLQDSADSLPAEKR 300
             +AVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVSILKARELEKDLQDSADSLPAEKR
Sbjct: 241 KLEAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVSILKARELEKDLQDSADSLPAEKR 300

Query: 301 LTIFDKIFTAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQLLVKI 360
           LTIFDKIFTAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQLLVKI
Sbjct: 301 LTIFDKIFTAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQLLVKI 360

Query: 361 AKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDRKPEEVTFAEECSLK 420
           AKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDRKPEEVTFAEECSLK
Sbjct: 361 AKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDRKPEEVTFAEECSLK 420

Query: 421 SIAFRGERCFYLAKSYSLAGKRAEAHVLYCHARSLVEDAIQKFRSENISDPKIIEELKTL 480
           SIAFRGERCFYLAKSYSLAGKRAEAHVLYCHARSLVEDAIQKFRSENISDP IIEELKTL
Sbjct: 421 SIAFRGERCFYLAKSYSLAGKRAEAHVLYCHARSLVEDAIQKFRSENISDP-IIEELKTL 480

Query: 481 IDECRANSCIEHATGIIEEIKAPENLSNKISNMSLTGAEKKPVKYLLQSLDNYESAIANS 540
           I+ECRANSCIEHATGI+EEIKAPENLSNKISNMSLTGAEKKPVKYLLQSLDNYES IANS
Sbjct: 481 IEECRANSCIEHATGIMEEIKAPENLSNKISNMSLTGAEKKPVKYLLQSLDNYESVIANS 540

Query: 541 NTKSAPRIEAFPPAFQAIPRNPIVLDLAFNFIDFPSLENRMKKDRKGFISRLWG 550
           NTKSAPRIEAFPPAFQAIPRNPIVLDLAFNFIDFPSLENRMKKDRKGFISRLWG
Sbjct: 541 NTKSAPRIEAFPPAFQAIPRNPIVLDLAFNFIDFPSLENRMKKDRKGFISRLWG 593

[Close]

BLAST of Cp4.1LG04g12320 vs. ExPASy TrEMBL
Match: A0A6J1HQ31 (Signal recognition particle subunit SRP68 OS=Cucurbita maxima OX=3661 GN=LOC111465584 PE=3 SV=1)

HSP 1 Score: 1004 bits (2596), Expect = 0.0
Identity = 533/594 (89.73%), Postives = 539/594 (90.74%), Query Frame = 0


Query: 1   MASMEIDSANSNASDPDNPRFSINVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKS 60
           MASMEIDSA+SNASDPDNPRFSINVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKS
Sbjct: 1   MASMEIDSASSNASDPDNPRFSINVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKS 60

Query: 61  LKFTHGRGKYTKRAITQSTVTEVRFLHVVLYTAERAWSHAMEKRQLPDGPNARQRIYLIG 120
           LKFTHGRGKYTKRAITQSTVTEVRFLHVVLYTAERAWSHAMEKRQLPDGPNARQRIYLIG
Sbjct: 61  LKFTHGRGKYTKRAITQSTVTEVRFLHVVLYTAERAWSHAMEKRQLPDGPNARQRIYLIG 120

Query: 121 RLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDRNWDIALLNFKRSRLV 180
           RLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDRNWDIALLNFKRSR V
Sbjct: 121 RLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDRNWDIALLNFKRSRAV 180

Query: 181 --KLTATGSLKFQ--CVSATEE-------------------------------------- 240
             +L   G L+ Q  C    EE                                      
Sbjct: 181 YEELGKVGDLENQVLCRERVEELEPSIRYCLHKIGKSNIQASELLHIGEMEGPALDLFKA 240

Query: 241 --KAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVSILKARELEKDLQDSADSLPAEKR 300
             +AVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVSILKARELEKDLQDSADSLPAEKR
Sbjct: 241 KLEAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVSILKARELEKDLQDSADSLPAEKR 300

Query: 301 LTIFDKIFTAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQLLVKI 360
           LTIFDKIFTAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSA+LGQRTIERNQLLVKI
Sbjct: 301 LTIFDKIFTAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAMLGQRTIERNQLLVKI 360

Query: 361 AKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDRKPEEVTFAEECSLK 420
           AKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDRKPEEVTFAEECSLK
Sbjct: 361 AKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDRKPEEVTFAEECSLK 420

Query: 421 SIAFRGERCFYLAKSYSLAGKRAEAHVLYCHARSLVEDAIQKFRSENISDPKIIEELKTL 480
           SIAFRGERCFYLAKSYSLAGKRAEAHVLYCHARSLVEDAIQKFRSENISDP IIEELKTL
Sbjct: 421 SIAFRGERCFYLAKSYSLAGKRAEAHVLYCHARSLVEDAIQKFRSENISDP-IIEELKTL 480

Query: 481 IDECRANSCIEHATGIIEEIKAPENLSNKISNMSLTGAEKKPVKYLLQSLDNYESAIANS 540
           I+ECRANSCIEHATGIIEEIKAPENLSNKISNMSLTGAEKKPVKYLLQSLDNYESAIANS
Sbjct: 481 IEECRANSCIEHATGIIEEIKAPENLSNKISNMSLTGAEKKPVKYLLQSLDNYESAIANS 540

Query: 541 NTKSAPRIEAFPPAFQAIPRNPIVLDLAFNFIDFPSLENRMKKDRKGFISRLWG 550
           NTKSAPRIEAFPPAFQAIPRNPIVLDLAFNFIDFPSLENRMKKDRKGFISRLWG
Sbjct: 541 NTKSAPRIEAFPPAFQAIPRNPIVLDLAFNFIDFPSLENRMKKDRKGFISRLWG 593

[Close]

BLAST of Cp4.1LG04g12320 vs. ExPASy TrEMBL
Match: A0A6J1JC09 (Signal recognition particle subunit SRP68 OS=Cucurbita maxima OX=3661 GN=LOC111485409 PE=3 SV=1)

HSP 1 Score: 964 bits (2493), Expect = 0.0
Identity = 507/594 (85.35%), Postives = 528/594 (88.89%), Query Frame = 0


Query: 1   MASMEIDSANSNASDPDNPRFSINVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKS 60
           MASME+DSANSNASDPDNPRFS+NVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKS
Sbjct: 1   MASMEVDSANSNASDPDNPRFSVNVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKS 60

Query: 61  LKFTHGRGKYTKRAITQSTVTEVRFLHVVLYTAERAWSHAMEKRQLPDGPNARQRIYLIG 120
           LKFTHGRGKYTKRAITQSTV+EVRFLHVVLY AERAWSHAMEKRQLP GPNARQRIYLIG
Sbjct: 61  LKFTHGRGKYTKRAITQSTVSEVRFLHVVLYMAERAWSHAMEKRQLPAGPNARQRIYLIG 120

Query: 121 RLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDRNWDIALLNFKRSRLV 180
           RLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQD+NWDIALLNFKR+R V
Sbjct: 121 RLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDQNWDIALLNFKRARAV 180

Query: 181 --KLTATGSLKFQ--CVSATEE-------------------------------------- 240
             +L   G L+ Q  C    EE                                      
Sbjct: 181 YEELGKVGDLENQVLCRERVEELEPSIRYCLHKIGKSDLQASELLHIGEMEGPALDLFKA 240

Query: 241 --KAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVSILKARELEKDLQDSADSLPAEKR 300
             +AVMSEARSQQAVSMTEFHWLGHRFPISNAKTRV+ILKARELEKDLQ SADSLPAEKR
Sbjct: 241 KLEAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVAILKARELEKDLQGSADSLPAEKR 300

Query: 301 LTIFDKIFTAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQLLVKI 360
           L+IFDKIF AYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQLLVKI
Sbjct: 301 LSIFDKIFAAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQLLVKI 360

Query: 361 AKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDRKPEEVTFAEECSLK 420
           AKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDR+ EEV FAEECSLK
Sbjct: 361 AKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDRRQEEVAFAEECSLK 420

Query: 421 SIAFRGERCFYLAKSYSLAGKRAEAHVLYCHARSLVEDAIQKFRSENISDPKIIEELKTL 480
           SIAFRGERCFYLAKSYSLAGKRAE +VLYCHARSLVEDAIQKFR+ENISDPKIIEELKTL
Sbjct: 421 SIAFRGERCFYLAKSYSLAGKRAEGYVLYCHARSLVEDAIQKFRTENISDPKIIEELKTL 480

Query: 481 IDECRANSCIEHATGIIEEIKAPENLSNKISNMSLTGAEKKPVKYLLQSLDNYESAIANS 540
           I+ECRANSCIEHATGIIEE+KAPENLS KISN+SLTGAEKK VKYLLQSLDNYESA+ +S
Sbjct: 481 IEECRANSCIEHATGIIEEVKAPENLSKKISNISLTGAEKKSVKYLLQSLDNYESAVGDS 540

Query: 541 NTKSAPRIEAFPPAFQAIPRNPIVLDLAFNFIDFPSLENRMKKDRKGFISRLWG 550
           N K+AP IEAFPPAF+AIPRNPIVLDLAFN+IDFPSLENRMKKDRKGFISRLWG
Sbjct: 541 NIKTAPCIEAFPPAFRAIPRNPIVLDLAFNYIDFPSLENRMKKDRKGFISRLWG 594

[Close]

BLAST of Cp4.1LG04g12320 vs. TAIR 10
Match: AT5G61970.1 (signal recognition particle-related / SRP-related )

HSP 1 Score: 757.7 bits (1955), Expect = 6.6e-219
Identity = 405/594 (68.18%), Postives = 466/594 (78.45%), Query Frame = 0


Query: 1   MASMEIDSANSNASDPDNPRFSINVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKS 60
           +++MEID   S +SD   PRFSINVLQL+KS+Q QHGLRHGDY RYRRYC+ARLRRLYKS
Sbjct: 8   ISAMEIDDPKSESSDQILPRFSINVLQLMKSSQAQHGLRHGDYARYRRYCSARLRRLYKS 67

Query: 61  LKFTHGRGKYTKRAITQSTVTEVRFLHVVLYTAERAWSHAMEKRQLPDGPNARQRIYLIG 120
           LKFTHGRGKYT+RAI +STVT+VRFLHVV Y AERAWSHAMEKRQLPDGPNARQRIYL+G
Sbjct: 68  LKFTHGRGKYTRRAILESTVTDVRFLHVVFYMAERAWSHAMEKRQLPDGPNARQRIYLVG 127

Query: 121 RLRKAVKWATLFAQLCASKGDSRTSLEAEAYASYMTGNLLFEQDRNWDIALLNFKRSRLV 180
           RLRKAVKWA+LF+ LC+ K DSRTSLEAEAYASYM G LLFEQD+NW+  L  FK +R V
Sbjct: 128 RLRKAVKWASLFSSLCSIKTDSRTSLEAEAYASYMKGTLLFEQDQNWETGLACFKNARAV 187

Query: 181 --KLTATGSLKFQ--CVSATEE-------------------------------------- 240
             +L   G L+ Q  C    EE                                      
Sbjct: 188 YEELGKYGDLENQVLCRERVEELEPSIRYCLHKIGKSNLQTSELLQIGEMEGPALDLFKA 247

Query: 241 --KAVMSEARSQQAVSMTEFHWLGHRFPISNAKTRVSILKARELEKDLQD-SADSLPAEK 300
             +A M EARSQQA S+TEF WLG+RFP+SN K+RVSILKA+ELEK+LQ  +A+SLPAEK
Sbjct: 248 KIEAAMEEARSQQAASLTEFSWLGYRFPVSNPKSRVSILKAQELEKELQSPTAESLPAEK 307

Query: 301 RLTIFDKIFTAYHEARSSIRSDLVSAGNAENVKDDLSGLDKAVSAVLGQRTIERNQLLVK 360
           +LTIFDK+FTAYH+AR++IRSDLVSAGNAE+VKDDL+GLDKAV AVLGQRTIERNQLLVK
Sbjct: 308 KLTIFDKLFTAYHDARNTIRSDLVSAGNAESVKDDLNGLDKAVGAVLGQRTIERNQLLVK 367

Query: 361 IAKSKLVRRHDEKNEKVTKPEELVRLYDLLLQNIADLSDLVSSGRDRKPEEVTFAEECSL 420
           +AKSKL R+ D+KN+KVT+PEELVRLYDLLLQN+ADLSDL+SSGRDRKPEE+ F EEC  
Sbjct: 368 VAKSKLNRKRDDKNDKVTRPEELVRLYDLLLQNVADLSDLISSGRDRKPEEIAFEEECQR 427

Query: 421 KSIAFRGERCFYLAKSYSLAGKRAEAHVLYCHARSLVEDAIQKFRSENISDPKIIEELKT 480
            S+AFR ERCFYLAKSYSLAGKRAEA  LY  ARSL EDA+ KF+S    D   I+ELKT
Sbjct: 428 TSLAFRAERCFYLAKSYSLAGKRAEAFALYSRARSLAEDALNKFQSIAKKDEGTIQELKT 487

Query: 481 LIDECRANSCIEHATGIIEEIKAPENLSNKISNMSLTG-AEKKPVKYLLQSLDNYESAIA 540
           LI ECRANSCIEHATGI+EE +APENLSN++S +SL   A +   KYLL  LD YESA+ 
Sbjct: 488 LIKECRANSCIEHATGIMEEERAPENLSNRMSTISLNNTAAQVEEKYLLDKLDVYESAVG 547

Query: 541 NSNTKSAPRIEAFPPAFQAIPRNPIVLDLAFNFIDFPSLENRMKKDRKGFISRL 549
           +SNTK+AP+IE FPPA Q+IPRNPIVLDLA+N IDFP +ENRMKK    F SR+
Sbjct: 548 DSNTKTAPKIERFPPALQSIPRNPIVLDLAYNCIDFPVIENRMKKKGGFFSSRI 601

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g12320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q00004	1.9e-61	29.67	Signal recognition particle subunit SRP68 OS=Canis lupus familiaris OX=9615 GN=S...	[more]
Q8BMA6	1.2e-60	29.80	Signal recognition particle subunit SRP68 OS=Mus musculus OX=10090 GN=Srp68 PE=1...	[more]
Q9UHB9	2.1e-60	29.58	Signal recognition particle subunit SRP68 OS=Homo sapiens OX=9606 GN=SRP68 PE=1 ...	[more]
Q9VSS2	2.8e-49	26.60	Signal recognition particle subunit SRP68 OS=Drosophila melanogaster OX=7227 GN=...	[more]
Q20822	2.2e-41	24.83	Probable signal recognition particle subunit SRP68 OS=Caenorhabditis elegans OX=...	[more]

BLAST of Cp4.1LG04g12320 vs. NCBI nr


Match Name	Identity	Description
XP_023531771.1	90.40	signal recognition particle subunit SRP68-like isoform X1 [Cucurbita pepo subsp....	[more]
XP_022933752.1	89.90	signal recognition particle subunit SRP68-like isoform X1 [Cucurbita moschata]	[more]
XP_022965811.1	89.90	signal recognition particle subunit SRP68-like isoform X1 [Cucurbita maxima]	[more]
XP_023531772.1	90.24	signal recognition particle subunit SRP68-like isoform X2 [Cucurbita pepo subsp....	[more]
KAG6588218.1	90.07	Signal recognition particle subunit SRP68, partial [Cucurbita argyrosperma subsp...	[more]

BLAST of Cp4.1LG04g12320 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1F0Q1	89.90	Signal recognition particle subunit SRP68 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1HMP5	89.90	Signal recognition particle subunit SRP68 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1F5Q6	89.73	Signal recognition particle subunit SRP68 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1HQ31	89.73	Signal recognition particle subunit SRP68 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1JC09	85.35	Signal recognition particle subunit SRP68 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]

BLAST of Cp4.1LG04g12320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G61970.1	6.6e-219	68.18	signal recognition particle-related / SRP-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026258	Signal recognition particle subunit SRP68	PIRSF	PIRSF038995	SRP68	coord: 184..544 e-value: 3.2E-38 score: 129.3 coord: 21..189 e-value: 3.7E-38 score: 129.1
IPR026258	Signal recognition particle subunit SRP68	PFAM	PF16969	SRP68	coord: 38..180 e-value: 2.5E-55 score: 188.6 coord: 199..528 e-value: 7.4E-73 score: 246.4
IPR026258	Signal recognition particle subunit SRP68	PANTHER	PTHR12860	SIGNAL RECOGNITION PARTICLE 68 KDA PROTEIN	coord: 199..550 coord: 7..178
IPR038253	SRP68, N-terminal domain superfamily	GENE3D	1.10.3450.40		coord: 20..212 e-value: 5.6E-56 score: 191.8
IPR034652	Signal recognition particle subunit SRP68, RNA-binding domain	CDD	cd15481	SRP68-RBD	coord: 24..178 e-value: 5.36997E-50 score: 168.942

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g12320.1	Cp4.1LG04g12320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006614	SRP-dependent cotranslational protein targeting to membrane
cellular_component	GO:0005786	signal recognition particle, endoplasmic reticulum targeting
molecular_function	GO:0008312	7S RNA binding
molecular_function	GO:0030942	endoplasmic reticulum signal peptide binding
molecular_function	GO:0005047	signal recognition particle binding
molecular_function	GO:0003723	RNA binding