Cp4.1LG04g11720 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG04g11720
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Location	Cp4.1LG04: 8688664 .. 8689470 (+)
RNA-Seq Expression	Cp4.1LG04g11720
Synteny	Cp4.1LG04g11720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGACCGCGTCCATCCCGCGGACTCTCCCCGTCCGAGCACCTCCTCCGTTTCCTCTGACTCCAAGCCTCCCTCTCTGTCCGCGGCCGCTGAAAAGCCTTCTCCTGCTCCCGGTACCTACGTCATCCAGATCCCCAAGGATCAGGTATACCGCGTTCCGCCTCCCGAAAATGCTTACCACTTCGATCGCTATACTCGCCGCAAGCACCGCCGCAGCCGTAGTCGCTGCTGTTGCTGTCTCTGCTGGCTTCTCGCTCTCCTCGTAATCCTCATCGTTCTTCTAGGTATTGCTGCTGCGGTTTTTTACTTAGTCGTTCGCCCTAAATCGCCTAATTACTCGATCGATTCCATCGCCATTAGAGGACTGAACTTGACTGCCTCGTCCATATCCGCGATTTCGCCTAATTTCGATGTTGCCGTTCGAGCGGATAATCCGAACAAGAAGATCGGAATCTATTACCTAACAGGTAGTTCGGTTCGAATCTATTTCTCTGATGAGAAGCTTTCCGATGGCGTTTTGCCTGATTTCTTTCAGCCAGCGAAAAACATCACTGTGTTCCGATCGTCTGTGAGAGGATCTGGTGTTAATCTATCGAACAAAGCGACCAACGCGATGATCGATTCGCAGAATCGGCATGCGGTACCGTTCAAAGTGGAGATTCGAGCGCCGATTAAACTGAAAATAGGATCGGTGAAGAGTTGGAAGATCAGAGTGAAGGTATTTTGCGATGTGACGGTGGATCAGTTGAGTGCGGCGGCGAAGATTGTTTCAAAGAACTGCGATTACAGTGTGAAGCTATGGTAG

mRNA sequence

ATGGCCGACCGCGTCCATCCCGCGGACTCTCCCCGTCCGAGCACCTCCTCCGTTTCCTCTGACTCCAAGCCTCCCTCTCTGTCCGCGGCCGCTGAAAAGCCTTCTCCTGCTCCCGGTACCTACGTCATCCAGATCCCCAAGGATCAGGTATACCGCGTTCCGCCTCCCGAAAATGCTTACCACTTCGATCGCTATACTCGCCGCAAGCACCGCCGCAGCCGTAGTCGCTGCTGTTGCTGTCTCTGCTGGCTTCTCGCTCTCCTCGTAATCCTCATCGTTCTTCTAGGTATTGCTGCTGCGGTTTTTTACTTAGTCGTTCGCCCTAAATCGCCTAATTACTCGATCGATTCCATCGCCATTAGAGGACTGAACTTGACTGCCTCGTCCATATCCGCGATTTCGCCTAATTTCGATGTTGCCGTTCGAGCGGATAATCCGAACAAGAAGATCGGAATCTATTACCTAACAGGTAGTTCGGTTCGAATCTATTTCTCTGATGAGAAGCTTTCCGATGGCGTTTTGCCTGATTTCTTTCAGCCAGCGAAAAACATCACTGTGTTCCGATCGTCTGTGAGAGGATCTGGTGTTAATCTATCGAACAAAGCGACCAACGCGATGATCGATTCGCAGAATCGGCATGCGGTACCGTTCAAAGTGGAGATTCGAGCGCCGATTAAACTGAAAATAGGATCGGTGAAGAGTTGGAAGATCAGAGTGAAGGTATTTTGCGATGTGACGGTGGATCAGTTGAGTGCGGCGGCGAAGATTGTTTCAAAGAACTGCGATTACAGTGTGAAGCTATGGTAG

Coding sequence (CDS)

ATGGCCGACCGCGTCCATCCCGCGGACTCTCCCCGTCCGAGCACCTCCTCCGTTTCCTCTGACTCCAAGCCTCCCTCTCTGTCCGCGGCCGCTGAAAAGCCTTCTCCTGCTCCCGGTACCTACGTCATCCAGATCCCCAAGGATCAGGTATACCGCGTTCCGCCTCCCGAAAATGCTTACCACTTCGATCGCTATACTCGCCGCAAGCACCGCCGCAGCCGTAGTCGCTGCTGTTGCTGTCTCTGCTGGCTTCTCGCTCTCCTCGTAATCCTCATCGTTCTTCTAGGTATTGCTGCTGCGGTTTTTTACTTAGTCGTTCGCCCTAAATCGCCTAATTACTCGATCGATTCCATCGCCATTAGAGGACTGAACTTGACTGCCTCGTCCATATCCGCGATTTCGCCTAATTTCGATGTTGCCGTTCGAGCGGATAATCCGAACAAGAAGATCGGAATCTATTACCTAACAGGTAGTTCGGTTCGAATCTATTTCTCTGATGAGAAGCTTTCCGATGGCGTTTTGCCTGATTTCTTTCAGCCAGCGAAAAACATCACTGTGTTCCGATCGTCTGTGAGAGGATCTGGTGTTAATCTATCGAACAAAGCGACCAACGCGATGATCGATTCGCAGAATCGGCATGCGGTACCGTTCAAAGTGGAGATTCGAGCGCCGATTAAACTGAAAATAGGATCGGTGAAGAGTTGGAAGATCAGAGTGAAGGTATTTTGCGATGTGACGGTGGATCAGTTGAGTGCGGCGGCGAAGATTGTTTCAAAGAACTGCGATTACAGTGTGAAGCTATGGTAG

Protein sequence

MADRVHPADSPRPSTSSVSSDSKPPSLSAAAEKPSPAPGTYVIQIPKDQVYRVPPPENAYHFDRYTRRKHRRSRSRCCCCLCWLLALLVILIVLLGIAAAVFYLVVRPKSPNYSIDSIAIRGLNLTASSISAISPNFDVAVRADNPNKKIGIYYLTGSSVRIYFSDEKLSDGVLPDFFQPAKNITVFRSSVRGSGVNLSNKATNAMIDSQNRHAVPFKVEIRAPIKLKIGSVKSWKIRVKVFCDVTVDQLSAAAKIVSKNCDYSVKLW

Homology

[Close]

BLAST of Cp4.1LG04g11720 vs. ExPASy Swiss-Prot
Match: Q9ZVD2 (NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 8.1e-66
Identity = 132/268 (49.25%), Postives = 190/268 (70.90%), Query Frame = 0


Query: 1   MADRVHPADSPRPSTSSVSSDSKPPSLSAAAEKPSPAPGTYVIQIPKDQVYRVPPPENAY 60
           MA+RV+PADSP P +   S +    S     +KP+P P TYVIQ+PKDQ+YR+PPPENA+
Sbjct: 1   MAERVYPADSP-PQSGQFSGNF---SSGEFPKKPAPPPSTYVIQVPKDQIYRIPPPENAH 60

Query: 61  HFDRYTRRKHRRSRSRCCCCLCWLLALLVILIVLLGIAAAVFYLVVRPKSPNYSIDSIAI 120
            F++ +R+K   +RS C CC C  LA + ILIVL GI+ AV YL+ RP++P YSI+  ++
Sbjct: 61  RFEQLSRKK--TNRSNCRCCFCSFLAAVFILIVLAGISFAVLYLIYRPEAPKYSIEGFSV 120

Query: 121 RGLNLTASSISAISPNFDVAVRADNPNKKIGIYYLTGSSVRIYFSDEKLSDGVLPDFFQP 180
            G+NL  +S S ISP+F+V VR+ N N KIG+YY   SSV +Y++D  +S+GV+P F+QP
Sbjct: 121 SGINL--NSTSPISPSFNVTVRSRNGNGKIGVYYEKESSVDVYYNDVDISNGVMPVFYQP 180

Query: 181 AKNITVFRSSVRGSGVNLSNKATNAMIDSQNRHAVPFKVEIRAPIKLKIGSVKSWKIRVK 240
           AKN+TV +  + GS + L++     M +  ++  VPFK++I+AP+K+K GSVK+W + V 
Sbjct: 181 AKNVTVVKLVLSGSKIQLTSGMRKEMRNEVSKKTVPFKLKIKAPVKIKFGSVKTWTMIVN 240

Query: 241 VFCDVTVDQLSAAAKIVSKNCDYSVKLW 269
           V CDVTVD+L+A ++IVS+ C + V LW
Sbjct: 241 VDCDVTVDKLTAPSRIVSRKCSHDVDLW 260

[Close]

BLAST of Cp4.1LG04g11720 vs. ExPASy Swiss-Prot
Match: Q8LD98 (NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.6e-29
Identity = 68/199 (34.17%), Postives = 113/199 (56.78%), Query Frame = 0


Query: 71  RRSRSRCCCCLCWLLALLVILIVLLGIAAAVFYLVVRPKSPNYSIDSIAIRGLNLTASSI 130
           ++ RS CC C C+    L++L+V +G +  + YLV +PK P+YSID + +    L     
Sbjct: 56  KKRRSCCCRCFCYTFCFLLLLVVAVGASIGILYLVFKPKLPDYSIDRLQLTRFALNQD-- 115

Query: 131 SAISPNFDVAVRADNPNKKIGIYYLTGSSVRIYFSDEKLSDGVLPDFFQPAKNITVFRSS 190
           S+++  F+V + A NPN+KIGIYY  GS + +++ + +LS+G LP F+Q  +N TV    
Sbjct: 116 SSLTTAFNVTITAKNPNEKIGIYYEDGSKITVWYMEHQLSNGSLPKFYQGHENTTVIYVE 175

Query: 191 VRGSGVNLSNKATNAMIDSQNRHAVPFKVEIRAPIKLKIGSVKSWKIRVKVFCDVTVDQL 250
           + G   N S   T      Q    +P ++ +  P+++K G +K +++R  V C V VD L
Sbjct: 176 MTGQTQNASGLRTTLEEQQQRTGNIPLRIRVNQPVRVKFGKLKLFEVRFLVRCGVFVDSL 235

Query: 251 SA--AAKIVSKNCDYSVKL 268
           +     KI S +C + ++L
Sbjct: 236 ATNNVIKIQSSSCKFRLRL 252

[Close]

BLAST of Cp4.1LG04g11720 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.9e-15
Identity = 60/194 (30.93%), Postives = 101/194 (52.06%), Query Frame = 0


Query: 53  VPPPENAYHFDRYTRRKHRRSRSRCCCCLCWLLALLVI-LIVLLGIAAAVFYLVVRPKSP 112
           VPPP        Y RR H R    C CCL  L   ++I LIV+LG+AA +F+L+VRP++ 
Sbjct: 16  VPPPAP----KGYYRRGHGRG---CGCCLLSLFVKVIISLIVILGVAALIFWLIVRPRAI 75

Query: 113 NYSIDSIAIRGLNLTASSISAISPNFDVAVRADNPNKKIGIYYLTGSSVRIYFSDEKLSD 172
            + +   ++   + T S  + +  N  + V   NPNK+IG+YY        Y+  ++ S 
Sbjct: 76  KFHVTDASLTRFDHT-SPDNILRYNLALTVPVRNPNKRIGLYY-DRIEAHAYYEGKRFST 135

Query: 173 GVLPDFFQPAKNITVFRSSVRGSGVNLSNKATNAMIDSQNRHAV-PFKVEIRAPIKLKIG 232
             L  F+Q  KN TV   + +G  + + N   +  ++++    V   +++ R  ++ K+G
Sbjct: 136 ITLTPFYQGHKNTTVLTPTFQGQNLVIFNAGQSRTLNAERISGVYNIEIKFRLRVRFKLG 195

Query: 233 SVKSWKIRVKVFCD 245
            +K  +I+ KV CD
Sbjct: 196 DLKFRRIKPKVDCD 200

[Close]

BLAST of Cp4.1LG04g11720 vs. ExPASy Swiss-Prot
Match: Q9FNH6 (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.8e-12
Identity = 56/208 (26.92%), Postives = 92/208 (44.23%), Query Frame = 0


Query: 53  VPPPENAYHFDRYTRRKHRRSRSRC-----------CCCLCWLLALLVILIVLLGIAAAV 112
           +PPP+   H        H R    C           CC L  +  +L+ + VLLGIAA +
Sbjct: 13  IPPPKKVSH-------SHGRRGGGCGCLGDCLGCCGCCILSVIFNILITIAVLLGIAALI 72

Query: 113 FYLVVRPKSPNYSIDSIAIRGLNLTASSISAISPNFDVAVRADNPNKKIGIYYLTGSSVR 172
            +L+ RP +  + +    +     T    + +  N D+     NPN++IG+YY     VR
Sbjct: 73  IWLIFRPNAIKFHVTDAKL--TEFTLDPTNNLRYNLDLNFTIRNPNRRIGVYY-DEIEVR 132

Query: 173 IYFSDEKLS-DGVLPDFFQPAKNITVFRSSVRGSG-VNLSNKATNAMIDSQNRHAVPFKV 232
            Y+ D++      +  F+Q  KN TV  + + G   V L       + +  N        
Sbjct: 133 GYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGGERKDLNEDVNSQIYRIDA 192

Query: 233 EIRAPIKLKIGSVKSWKIRVKVFCDVTV 248
           ++R  I+ K G +KSW+ + K+ CD+ V
Sbjct: 193 KLRLKIRFKFGLIKSWRFKPKIKCDLKV 210

[Close]

BLAST of Cp4.1LG04g11720 vs. ExPASy Swiss-Prot
Match: Q9FI03 (NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.5e-08
Identity = 37/150 (24.67%), Postives = 74/150 (49.33%), Query Frame = 0


Query: 96  GIAAAVF--YLVVRPKSPNYSIDSIAIRGLNLTASSISAISPNFDVAVRADNPNKKIGIY 155
           G+   +F  +L++ P+ P +S+    I  LNLT SS   ++ +  + + + NPNKK+GIY
Sbjct: 37  GLLLIIFLVWLILHPERPEFSLTEADIYSLNLTTSSTHLLNSSVQLTLFSKNPNKKVGIY 96

Query: 156 YLTGSSVRIYFSDEKLSDGVLPDFFQPAKNITVFRSSVRGSGVNLSNKATNAMIDSQNRH 215
           Y        Y   +  S+  LP F+Q  + I +  + ++G+ + ++      +   ++  
Sbjct: 97  YDKLLVYAAYRGQQITSEASLPPFYQSHEEINLLTAFLQGTELPVAQSFGYQISRERSTG 156

Query: 216 AVPFKVEIRAPIKLKIGSVKSWKIRVKVFC 244
            +   +++   ++ KIG+  S   R  V C
Sbjct: 157 KIIIGMKMDGKLRWKIGTWVSGAYRFNVNC 186

[Close]

BLAST of Cp4.1LG04g11720 vs. NCBI nr
Match: XP_023531236.1 (NDR1/HIN1-like protein 13 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 520 bits (1338), Expect = 1.32e-185
Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0


Query: 1   MADRVHPADSPRPSTSSVSSDSKPPSLSAAAEKPSPAPGTYVIQIPKDQVYRVPPPENAY 60
           MADRVHPADSPRPSTSSVSSDSKPPSLSAAAEKPSPAPGTYVIQIPKDQVYRVPPPENAY
Sbjct: 1   MADRVHPADSPRPSTSSVSSDSKPPSLSAAAEKPSPAPGTYVIQIPKDQVYRVPPPENAY 60

Query: 61  HFDRYTRRKHRRSRSRCCCCLCWLLALLVILIVLLGIAAAVFYLVVRPKSPNYSIDSIAI 120
           HFDRYTRRKHRRSRSRCCCCLCWLLALLVILIVLLGIAAAVFYLVVRPKSPNYSIDSIAI
Sbjct: 61  HFDRYTRRKHRRSRSRCCCCLCWLLALLVILIVLLGIAAAVFYLVVRPKSPNYSIDSIAI 120

Query: 121 RGLNLTASSISAISPNFDVAVRADNPNKKIGIYYLTGSSVRIYFSDEKLSDGVLPDFFQP 180
           RGLNLTASSISAISPNFDVAVRADNPNKKIGIYYLTGSSVRIYFSDEKLSDGVLPDFFQP
Sbjct: 121 RGLNLTASSISAISPNFDVAVRADNPNKKIGIYYLTGSSVRIYFSDEKLSDGVLPDFFQP 180

Query: 181 AKNITVFRSSVRGSGVNLSNKATNAMIDSQNRHAVPFKVEIRAPIKLKIGSVKSWKIRVK 240
           AKNITVFRSSVRGSGVNLSNKATNAMIDSQNRHAVPFKVEIRAPIKLKIGSVKSWKIRVK
Sbjct: 181 AKNITVFRSSVRGSGVNLSNKATNAMIDSQNRHAVPFKVEIRAPIKLKIGSVKSWKIRVK 240

Query: 241 VFCDVTVDQLSAAAKIVSKNCDYSVKLW 268
           VFCDVTVDQLSAAAKIVSKNCDYSVKLW
Sbjct: 241 VFCDVTVDQLSAAAKIVSKNCDYSVKLW 268

[Close]

BLAST of Cp4.1LG04g11720 vs. NCBI nr
Match: XP_022932868.1 (NDR1/HIN1-like protein 13 [Cucurbita moschata])

HSP 1 Score: 511 bits (1316), Expect = 2.98e-182
Identity = 262/268 (97.76%), Postives = 264/268 (98.51%), Query Frame = 0


Query: 1   MADRVHPADSPRPSTSSVSSDSKPPSLSAAAEKPSPAPGTYVIQIPKDQVYRVPPPENAY 60
           MADRVHPADSPRPSTSSV+SDSKPPSLSAAAEKPSPAPGTYVIQIPKDQVYRVPPPENAY
Sbjct: 1   MADRVHPADSPRPSTSSVASDSKPPSLSAAAEKPSPAPGTYVIQIPKDQVYRVPPPENAY 60

Query: 61  HFDRYTRRKHRRSRSRCCCCLCWLLALLVILIVLLGIAAAVFYLVVRPKSPNYSIDSIAI 120
           HFDRYTRRKHRRSRSRCCCCLCWLLAL VIL+VLLGIAAAVFY VVRPKSPNYSIDSIAI
Sbjct: 61  HFDRYTRRKHRRSRSRCCCCLCWLLALFVILVVLLGIAAAVFYFVVRPKSPNYSIDSIAI 120

Query: 121 RGLNLTASSISAISPNFDVAVRADNPNKKIGIYYLTGSSVRIYFSDEKLSDGVLPDFFQP 180
           RGLNLTASS SAISPNFDVAVRADNPNKKIGIYYLTGSSVRIYFSDEKLSDGVLPDFFQP
Sbjct: 121 RGLNLTASSTSAISPNFDVAVRADNPNKKIGIYYLTGSSVRIYFSDEKLSDGVLPDFFQP 180

Query: 181 AKNITVFRSSVRGSGVNLSNKATNAMIDSQNRHAVPFKVEIRAPIKLKIGSVKSWKIRVK 240
            KNITVFRSSVRGSGVNLSNKATNAMIDSQNRHAVPFKVEIRAPIKLKIGSVKSWKIRVK
Sbjct: 181 EKNITVFRSSVRGSGVNLSNKATNAMIDSQNRHAVPFKVEIRAPIKLKIGSVKSWKIRVK 240

Query: 241 VFCDVTVDQLSAAAKIVSKNCDYSVKLW 268
           VFCDVTVDQLSAAAKIVSKNCDYSVKLW
Sbjct: 241 VFCDVTVDQLSAAAKIVSKNCDYSVKLW 268

[Close]

BLAST of Cp4.1LG04g11720 vs. NCBI nr
Match: KAG7022047.1 (NDR1/HIN1-like protein 13, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 510 bits (1313), Expect = 8.53e-182
Identity = 261/268 (97.39%), Postives = 264/268 (98.51%), Query Frame = 0


Query: 1   MADRVHPADSPRPSTSSVSSDSKPPSLSAAAEKPSPAPGTYVIQIPKDQVYRVPPPENAY 60
           MADRVHPADSPRPSTSSV+SDSKPPSLSAAAEKPSPAPGTYVIQIPKDQVYRVPPPENAY
Sbjct: 1   MADRVHPADSPRPSTSSVASDSKPPSLSAAAEKPSPAPGTYVIQIPKDQVYRVPPPENAY 60

Query: 61  HFDRYTRRKHRRSRSRCCCCLCWLLALLVILIVLLGIAAAVFYLVVRPKSPNYSIDSIAI 120
           HFDRYTRRKHRRSRSRCCCCLCWLLAL+VIL+VLLGIAAAVFY VV PKSPNYSIDSIAI
Sbjct: 61  HFDRYTRRKHRRSRSRCCCCLCWLLALIVILVVLLGIAAAVFYFVVHPKSPNYSIDSIAI 120

Query: 121 RGLNLTASSISAISPNFDVAVRADNPNKKIGIYYLTGSSVRIYFSDEKLSDGVLPDFFQP 180
           RGLNLTASS SAISPNFDVAVRADNPNKKIGIYYLTGSSVRIYFSDEKLSDGVLPDFFQP
Sbjct: 121 RGLNLTASSTSAISPNFDVAVRADNPNKKIGIYYLTGSSVRIYFSDEKLSDGVLPDFFQP 180

Query: 181 AKNITVFRSSVRGSGVNLSNKATNAMIDSQNRHAVPFKVEIRAPIKLKIGSVKSWKIRVK 240
            KNITVFRSSVRGSGVNLSNKATNAMIDSQNRHAVPFKVEIRAPIKLKIGSVKSWKIRVK
Sbjct: 181 EKNITVFRSSVRGSGVNLSNKATNAMIDSQNRHAVPFKVEIRAPIKLKIGSVKSWKIRVK 240

Query: 241 VFCDVTVDQLSAAAKIVSKNCDYSVKLW 268
           VFCDVTVDQLSAAAKIVSKNCDYSVKLW
Sbjct: 241 VFCDVTVDQLSAAAKIVSKNCDYSVKLW 268

[Close]

BLAST of Cp4.1LG04g11720 vs. NCBI nr
Match: KAG6588154.1 (NDR1/HIN1-like protein 13, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 507 bits (1305), Expect = 1.41e-180
Identity = 260/268 (97.01%), Postives = 263/268 (98.13%), Query Frame = 0


Query: 1   MADRVHPADSPRPSTSSVSSDSKPPSLSAAAEKPSPAPGTYVIQIPKDQVYRVPPPENAY 60
           MADRVHPADSPRPSTSSV+SDSKPPSLSAAAEKPSPAPGTYVIQIPKDQVYRVPPPENAY
Sbjct: 1   MADRVHPADSPRPSTSSVASDSKPPSLSAAAEKPSPAPGTYVIQIPKDQVYRVPPPENAY 60

Query: 61  HFDRYTRRKHRRSRSRCCCCLCWLLALLVILIVLLGIAAAVFYLVVRPKSPNYSIDSIAI 120
           HFDRYTRRKHRRSRSRCCCCLCWLLAL+VIL+VLLGIAAAVFY VV PKS NYSIDSIAI
Sbjct: 61  HFDRYTRRKHRRSRSRCCCCLCWLLALIVILVVLLGIAAAVFYFVVHPKSSNYSIDSIAI 120

Query: 121 RGLNLTASSISAISPNFDVAVRADNPNKKIGIYYLTGSSVRIYFSDEKLSDGVLPDFFQP 180
           RGLNLTASS SAISPNFDVAVRADNPNKKIGIYYLTGSSVRIYFSDEKLSDGVLPDFFQP
Sbjct: 121 RGLNLTASSTSAISPNFDVAVRADNPNKKIGIYYLTGSSVRIYFSDEKLSDGVLPDFFQP 180

Query: 181 AKNITVFRSSVRGSGVNLSNKATNAMIDSQNRHAVPFKVEIRAPIKLKIGSVKSWKIRVK 240
            KNITVFRSSVRGSGVNLSNKATNAMIDSQNRHAVPFKVEIRAPIKLKIGSVKSWKIRVK
Sbjct: 181 EKNITVFRSSVRGSGVNLSNKATNAMIDSQNRHAVPFKVEIRAPIKLKIGSVKSWKIRVK 240

Query: 241 VFCDVTVDQLSAAAKIVSKNCDYSVKLW 268
           VFCDVTVDQLSAAAKIVSKNCDYSVKLW
Sbjct: 241 VFCDVTVDQLSAAAKIVSKNCDYSVKLW 268

[Close]

BLAST of Cp4.1LG04g11720 vs. NCBI nr
Match: XP_022968088.1 (NDR1/HIN1-like protein 13 [Cucurbita maxima])

HSP 1 Score: 506 bits (1302), Expect = 4.05e-180
Identity = 259/268 (96.64%), Postives = 264/268 (98.51%), Query Frame = 0


Query: 1   MADRVHPADSPRPSTSSVSSDSKPPSLSAAAEKPSPAPGTYVIQIPKDQVYRVPPPENAY 60
           MADRVHPADSPRPSTSSV+SD KPPSLSAAAEK SPAPGTYVIQIPKDQVYRVPPPENAY
Sbjct: 1   MADRVHPADSPRPSTSSVASDYKPPSLSAAAEKASPAPGTYVIQIPKDQVYRVPPPENAY 60

Query: 61  HFDRYTRRKHRRSRSRCCCCLCWLLALLVILIVLLGIAAAVFYLVVRPKSPNYSIDSIAI 120
           HFDRYTRRKHRRSRSRCCCCLCWLLAL+VIL+VLLGIAAAVFYLVVRPKSPNYSIDSIAI
Sbjct: 61  HFDRYTRRKHRRSRSRCCCCLCWLLALIVILVVLLGIAAAVFYLVVRPKSPNYSIDSIAI 120

Query: 121 RGLNLTASSISAISPNFDVAVRADNPNKKIGIYYLTGSSVRIYFSDEKLSDGVLPDFFQP 180
           RGLNLTASS SAISP FDVAVRADNPNKKIGIYYLTGSSVRIYFSDEKLSDGVLPDFFQP
Sbjct: 121 RGLNLTASSTSAISPIFDVAVRADNPNKKIGIYYLTGSSVRIYFSDEKLSDGVLPDFFQP 180

Query: 181 AKNITVFRSSVRGSGVNLSNKATNAMIDSQNRHAVPFKVEIRAPIKLKIGSVKSWKIRVK 240
           AKN+TVFRSSVRGSGVNLSNKATNAMIDSQNRHAVPFKVEIRAPIKLKIGSVKSWKIRVK
Sbjct: 181 AKNVTVFRSSVRGSGVNLSNKATNAMIDSQNRHAVPFKVEIRAPIKLKIGSVKSWKIRVK 240

Query: 241 VFCDVTVDQLSAAAKIVSKNCDYSVKLW 268
           VFCDVTVDQLSAAAKI+SKNCDYSVKLW
Sbjct: 241 VFCDVTVDQLSAAAKIISKNCDYSVKLW 268

[Close]

BLAST of Cp4.1LG04g11720 vs. ExPASy TrEMBL
Match: A0A6J1F2Z0 (NDR1/HIN1-like protein 13 OS=Cucurbita moschata OX=3662 GN=LOC111439401 PE=4 SV=1)

HSP 1 Score: 511 bits (1316), Expect = 1.44e-182
Identity = 262/268 (97.76%), Postives = 264/268 (98.51%), Query Frame = 0


Query: 1   MADRVHPADSPRPSTSSVSSDSKPPSLSAAAEKPSPAPGTYVIQIPKDQVYRVPPPENAY 60
           MADRVHPADSPRPSTSSV+SDSKPPSLSAAAEKPSPAPGTYVIQIPKDQVYRVPPPENAY
Sbjct: 1   MADRVHPADSPRPSTSSVASDSKPPSLSAAAEKPSPAPGTYVIQIPKDQVYRVPPPENAY 60

Query: 61  HFDRYTRRKHRRSRSRCCCCLCWLLALLVILIVLLGIAAAVFYLVVRPKSPNYSIDSIAI 120
           HFDRYTRRKHRRSRSRCCCCLCWLLAL VIL+VLLGIAAAVFY VVRPKSPNYSIDSIAI
Sbjct: 61  HFDRYTRRKHRRSRSRCCCCLCWLLALFVILVVLLGIAAAVFYFVVRPKSPNYSIDSIAI 120

Query: 121 RGLNLTASSISAISPNFDVAVRADNPNKKIGIYYLTGSSVRIYFSDEKLSDGVLPDFFQP 180
           RGLNLTASS SAISPNFDVAVRADNPNKKIGIYYLTGSSVRIYFSDEKLSDGVLPDFFQP
Sbjct: 121 RGLNLTASSTSAISPNFDVAVRADNPNKKIGIYYLTGSSVRIYFSDEKLSDGVLPDFFQP 180

Query: 181 AKNITVFRSSVRGSGVNLSNKATNAMIDSQNRHAVPFKVEIRAPIKLKIGSVKSWKIRVK 240
            KNITVFRSSVRGSGVNLSNKATNAMIDSQNRHAVPFKVEIRAPIKLKIGSVKSWKIRVK
Sbjct: 181 EKNITVFRSSVRGSGVNLSNKATNAMIDSQNRHAVPFKVEIRAPIKLKIGSVKSWKIRVK 240

Query: 241 VFCDVTVDQLSAAAKIVSKNCDYSVKLW 268
           VFCDVTVDQLSAAAKIVSKNCDYSVKLW
Sbjct: 241 VFCDVTVDQLSAAAKIVSKNCDYSVKLW 268

[Close]

BLAST of Cp4.1LG04g11720 vs. ExPASy TrEMBL
Match: A0A6J1HX04 (NDR1/HIN1-like protein 13 OS=Cucurbita maxima OX=3661 GN=LOC111467424 PE=4 SV=1)

HSP 1 Score: 506 bits (1302), Expect = 1.96e-180
Identity = 259/268 (96.64%), Postives = 264/268 (98.51%), Query Frame = 0


Query: 1   MADRVHPADSPRPSTSSVSSDSKPPSLSAAAEKPSPAPGTYVIQIPKDQVYRVPPPENAY 60
           MADRVHPADSPRPSTSSV+SD KPPSLSAAAEK SPAPGTYVIQIPKDQVYRVPPPENAY
Sbjct: 1   MADRVHPADSPRPSTSSVASDYKPPSLSAAAEKASPAPGTYVIQIPKDQVYRVPPPENAY 60

Query: 61  HFDRYTRRKHRRSRSRCCCCLCWLLALLVILIVLLGIAAAVFYLVVRPKSPNYSIDSIAI 120
           HFDRYTRRKHRRSRSRCCCCLCWLLAL+VIL+VLLGIAAAVFYLVVRPKSPNYSIDSIAI
Sbjct: 61  HFDRYTRRKHRRSRSRCCCCLCWLLALIVILVVLLGIAAAVFYLVVRPKSPNYSIDSIAI 120

Query: 121 RGLNLTASSISAISPNFDVAVRADNPNKKIGIYYLTGSSVRIYFSDEKLSDGVLPDFFQP 180
           RGLNLTASS SAISP FDVAVRADNPNKKIGIYYLTGSSVRIYFSDEKLSDGVLPDFFQP
Sbjct: 121 RGLNLTASSTSAISPIFDVAVRADNPNKKIGIYYLTGSSVRIYFSDEKLSDGVLPDFFQP 180

Query: 181 AKNITVFRSSVRGSGVNLSNKATNAMIDSQNRHAVPFKVEIRAPIKLKIGSVKSWKIRVK 240
           AKN+TVFRSSVRGSGVNLSNKATNAMIDSQNRHAVPFKVEIRAPIKLKIGSVKSWKIRVK
Sbjct: 181 AKNVTVFRSSVRGSGVNLSNKATNAMIDSQNRHAVPFKVEIRAPIKLKIGSVKSWKIRVK 240

Query: 241 VFCDVTVDQLSAAAKIVSKNCDYSVKLW 268
           VFCDVTVDQLSAAAKI+SKNCDYSVKLW
Sbjct: 241 VFCDVTVDQLSAAAKIISKNCDYSVKLW 268

[Close]

BLAST of Cp4.1LG04g11720 vs. ExPASy TrEMBL
Match: A0A6J1JCD4 (NDR1/HIN1-like protein 13 OS=Cucurbita maxima OX=3661 GN=LOC111485502 PE=4 SV=1)

HSP 1 Score: 427 bits (1099), Expect = 1.45e-149
Identity = 223/268 (83.21%), Postives = 244/268 (91.04%), Query Frame = 0


Query: 1   MADRVHPADSPRPSTSSVSSDSKPPSLSAAAEKPSPAPGTYVIQIPKDQVYRVPPPENAY 60
           MADRVHPA+SPRPSTSS  SDSKPPS SA  +KPSPAPGTYVIQ+PKDQ+YRVPPPENA+
Sbjct: 1   MADRVHPAESPRPSTSSAVSDSKPPSPSA--DKPSPAPGTYVIQLPKDQIYRVPPPENAH 60

Query: 61  HFDRYTRRKHRRSRSRCCCCLCWLLALLVILIVLLGIAAAVFYLVVRPKSPNYSIDSIAI 120
            F+ YTRRK+RRSR  CC CLCWLL +L +LIVLLGIA A+FYLVVRPKSPNYSID+IAI
Sbjct: 61  RFELYTRRKNRRSR--CCFCLCWLLGILAVLIVLLGIAVAIFYLVVRPKSPNYSIDAIAI 120

Query: 121 RGLNLTASSISAISPNFDVAVRADNPNKKIGIYYLTGSSVRIYFSDEKLSDGVLPDFFQP 180
           RGLN TASS S ISP FDVAVRADNPNKKIGIYY TGSSV+IYFSDEKLSDGVLP FFQP
Sbjct: 121 RGLNSTASSSSRISPVFDVAVRADNPNKKIGIYYQTGSSVQIYFSDEKLSDGVLPAFFQP 180

Query: 181 AKNITVFRSSVRGSGVNLSNKATNAMIDSQNRHAVPFKVEIRAPIKLKIGSVKSWKIRVK 240
           AKN+TVF+SSVRGSGVNLS++A+ A+IDSQ R AVPFKVEIRAPIKLKIGSVK+WKIRVK
Sbjct: 181 AKNVTVFQSSVRGSGVNLSSQASKALIDSQKRRAVPFKVEIRAPIKLKIGSVKTWKIRVK 240

Query: 241 VFCDVTVDQLSAAAKIVSKNCDYSVKLW 268
           V CDVTVDQL+AA KIVSKNCDY+VKLW
Sbjct: 241 VTCDVTVDQLAAAEKIVSKNCDYNVKLW 264

[Close]

BLAST of Cp4.1LG04g11720 vs. ExPASy TrEMBL
Match: A0A6J1H954 (NDR1/HIN1-like protein 13 OS=Cucurbita moschata OX=3662 GN=LOC111461695 PE=4 SV=1)

HSP 1 Score: 420 bits (1080), Expect = 1.14e-146
Identity = 220/268 (82.09%), Postives = 241/268 (89.93%), Query Frame = 0


Query: 1   MADRVHPADSPRPSTSSVSSDSKPPSLSAAAEKPSPAPGTYVIQIPKDQVYRVPPPENAY 60
           MADRVHPA+SPRPSTSS  SDSKPPS SA  +KP+PAPGTYVIQ+PKDQ+YRVPPPENA+
Sbjct: 1   MADRVHPAESPRPSTSSAVSDSKPPSPSA--DKPTPAPGTYVIQLPKDQIYRVPPPENAH 60

Query: 61  HFDRYTRRKHRRSRSRCCCCLCWLLALLVILIVLLGIAAAVFYLVVRPKSPNYSIDSIAI 120
            F+ YTRRK+RRSR  CC CLCWLL +L +LIVLLGIA A+FYLVVRPKSPNYSID+IAI
Sbjct: 61  RFELYTRRKNRRSR--CCFCLCWLLGILAVLIVLLGIAVAIFYLVVRPKSPNYSIDAIAI 120

Query: 121 RGLNLTASSISAISPNFDVAVRADNPNKKIGIYYLTGSSVRIYFSDEKLSDGVLPDFFQP 180
           RGLN TASS SAISP FDVAVRADNPNKKIGIYY T SSV+IYFSDEKLSDGVLP FFQP
Sbjct: 121 RGLNSTASSSSAISPVFDVAVRADNPNKKIGIYYQTDSSVQIYFSDEKLSDGVLPAFFQP 180

Query: 181 AKNITVFRSSVRGSGVNLSNKATNAMIDSQNRHAVPFKVEIRAPIKLKIGSVKSWKIRVK 240
           A N+TVF+SSVRGSGVNLS +A+ A+IDSQ R AVPF VEIRAPIKLKIGSVK+WKIRVK
Sbjct: 181 ANNVTVFQSSVRGSGVNLSKQASKALIDSQKRRAVPFTVEIRAPIKLKIGSVKTWKIRVK 240

Query: 241 VFCDVTVDQLSAAAKIVSKNCDYSVKLW 268
           V CDVTVDQL+AAAKIVSKNCDY+VK W
Sbjct: 241 VTCDVTVDQLAAAAKIVSKNCDYNVKPW 264

[Close]

BLAST of Cp4.1LG04g11720 vs. ExPASy TrEMBL
Match: A0A6J1DWA9 (NDR1/HIN1-like protein 13 OS=Momordica charantia OX=3673 GN=LOC111024089 PE=4 SV=1)

HSP 1 Score: 403 bits (1036), Expect = 6.11e-140
Identity = 211/270 (78.15%), Postives = 237/270 (87.78%), Query Frame = 0


Query: 1   MADRVHPADSPRPSTSSVSSD--SKPPSLSAAAEKPSPAPGTYVIQIPKDQVYRVPPPEN 60
           MA+RVHPADSPRPSTSS +SD  +KP  LS AAEKP P PGTYVIQIPKDQ+YRVPPPEN
Sbjct: 1   MAERVHPADSPRPSTSSAASDVATKPQPLSPAAEKPPPTPGTYVIQIPKDQIYRVPPPEN 60

Query: 61  AYHFDRYTRRKHRRSRSRCCCCLCWLLALLVILIVLLGIAAAVFYLVVRPKSPNYSIDSI 120
           A  F++YTRRKHRRSR  CCCCL WLLA+ +ILIVLLGIA AVFY VVRPKSPNYSID+I
Sbjct: 61  ARRFEQYTRRKHRRSR--CCCCLYWLLAIFLILIVLLGIAVAVFYFVVRPKSPNYSIDAI 120

Query: 121 AIRGLNLTASSISAISPNFDVAVRADNPNKKIGIYYLTGSSVRIYFSDEKLSDGVLPDFF 180
           AIRG+N  +S+ ++ISP FDV+VRADNPNKKIGIYY +GSSV+IYFSD KLSDGVLP FF
Sbjct: 121 AIRGIN--SSAAASISPEFDVSVRADNPNKKIGIYYESGSSVQIYFSDVKLSDGVLPAFF 180

Query: 181 QPAKNITVFRSSVRGSGVNLSNKATNAMIDSQNRHAVPFKVEIRAPIKLKIGSVKSWKIR 240
           QP KN+TVF S++ G+GVNLS KA  A+IDSQ R +VP KVEIRAPIKLKIGSVK+WKIR
Sbjct: 181 QPPKNVTVFGSTLXGTGVNLSTKANEALIDSQRRQSVPLKVEIRAPIKLKIGSVKTWKIR 240

Query: 241 VKVFCDVTVDQLSAAAKIVSKNCDYSVKLW 268
           VKV CDVTVD+L+AAAKIVSKNCDYSVKLW
Sbjct: 241 VKVVCDVTVDRLTAAAKIVSKNCDYSVKLW 266

[Close]

BLAST of Cp4.1LG04g11720 vs. TAIR 10
Match: AT2G27080.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 251.9 bits (642), Expect = 5.7e-67
Identity = 132/268 (49.25%), Postives = 190/268 (70.90%), Query Frame = 0


Query: 1   MADRVHPADSPRPSTSSVSSDSKPPSLSAAAEKPSPAPGTYVIQIPKDQVYRVPPPENAY 60
           MA+RV+PADSP P +   S +    S     +KP+P P TYVIQ+PKDQ+YR+PPPENA+
Sbjct: 1   MAERVYPADSP-PQSGQFSGNF---SSGEFPKKPAPPPSTYVIQVPKDQIYRIPPPENAH 60

Query: 61  HFDRYTRRKHRRSRSRCCCCLCWLLALLVILIVLLGIAAAVFYLVVRPKSPNYSIDSIAI 120
            F++ +R+K   +RS C CC C  LA + ILIVL GI+ AV YL+ RP++P YSI+  ++
Sbjct: 61  RFEQLSRKK--TNRSNCRCCFCSFLAAVFILIVLAGISFAVLYLIYRPEAPKYSIEGFSV 120

Query: 121 RGLNLTASSISAISPNFDVAVRADNPNKKIGIYYLTGSSVRIYFSDEKLSDGVLPDFFQP 180
            G+NL  +S S ISP+F+V VR+ N N KIG+YY   SSV +Y++D  +S+GV+P F+QP
Sbjct: 121 SGINL--NSTSPISPSFNVTVRSRNGNGKIGVYYEKESSVDVYYNDVDISNGVMPVFYQP 180

Query: 181 AKNITVFRSSVRGSGVNLSNKATNAMIDSQNRHAVPFKVEIRAPIKLKIGSVKSWKIRVK 240
           AKN+TV +  + GS + L++     M +  ++  VPFK++I+AP+K+K GSVK+W + V 
Sbjct: 181 AKNVTVVKLVLSGSKIQLTSGMRKEMRNEVSKKTVPFKLKIKAPVKIKFGSVKTWTMIVN 240

Query: 241 VFCDVTVDQLSAAAKIVSKNCDYSVKLW 269
           V CDVTVD+L+A ++IVS+ C + V LW
Sbjct: 241 VDCDVTVDKLTAPSRIVSRKCSHDVDLW 260

[Close]

BLAST of Cp4.1LG04g11720 vs. TAIR 10
Match: AT2G27080.2 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 251.9 bits (642), Expect = 5.7e-67
Identity = 132/268 (49.25%), Postives = 190/268 (70.90%), Query Frame = 0


Query: 1   MADRVHPADSPRPSTSSVSSDSKPPSLSAAAEKPSPAPGTYVIQIPKDQVYRVPPPENAY 60
           MA+RV+PADSP P +   S +    S     +KP+P P TYVIQ+PKDQ+YR+PPPENA+
Sbjct: 1   MAERVYPADSP-PQSGQFSGNF---SSGEFPKKPAPPPSTYVIQVPKDQIYRIPPPENAH 60

Query: 61  HFDRYTRRKHRRSRSRCCCCLCWLLALLVILIVLLGIAAAVFYLVVRPKSPNYSIDSIAI 120
            F++ +R+K   +RS C CC C  LA + ILIVL GI+ AV YL+ RP++P YSI+  ++
Sbjct: 61  RFEQLSRKK--TNRSNCRCCFCSFLAAVFILIVLAGISFAVLYLIYRPEAPKYSIEGFSV 120

Query: 121 RGLNLTASSISAISPNFDVAVRADNPNKKIGIYYLTGSSVRIYFSDEKLSDGVLPDFFQP 180
            G+NL  +S S ISP+F+V VR+ N N KIG+YY   SSV +Y++D  +S+GV+P F+QP
Sbjct: 121 SGINL--NSTSPISPSFNVTVRSRNGNGKIGVYYEKESSVDVYYNDVDISNGVMPVFYQP 180

Query: 181 AKNITVFRSSVRGSGVNLSNKATNAMIDSQNRHAVPFKVEIRAPIKLKIGSVKSWKIRVK 240
           AKN+TV +  + GS + L++     M +  ++  VPFK++I+AP+K+K GSVK+W + V 
Sbjct: 181 AKNVTVVKLVLSGSKIQLTSGMRKEMRNEVSKKTVPFKLKIKAPVKIKFGSVKTWTMIVN 240

Query: 241 VFCDVTVDQLSAAAKIVSKNCDYSVKLW 269
           V CDVTVD+L+A ++IVS+ C + V LW
Sbjct: 241 VDCDVTVDKLTAPSRIVSRKCSHDVDLW 260

[Close]

BLAST of Cp4.1LG04g11720 vs. TAIR 10
Match: AT5G21130.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 195.7 bits (496), Expect = 4.9e-50
Identity = 103/257 (40.08%), Postives = 162/257 (63.04%), Query Frame = 0


Query: 13  PSTSSVSSDSKPPSLSAAAEKPSPAPGTYVIQIPKDQVYRVPPPENAYHFDRYTRRKHRR 72
           PS  +  S S   S+ +   +  P PGTYVI++PKDQ+YRVPPPENA+ ++  +RRK  +
Sbjct: 30  PSLDTNDSSSSRYSVDSQKSRIGPPPGTYVIKLPKDQIYRVPPPENAHRYEYLSRRKTNK 89

Query: 73  SRSRCCC--CLCWLLALLVILIVLLGIAAAVFYLVVRPKSPNYSIDSIAIRGLNLTASSI 132
           S    CC  CLC+ L+ L+I+IVL  IA   FYLV +P  P +S+  +++ G+NLT+S  
Sbjct: 90  S----CCRRCLCYSLSALLIIIVLAAIAFGFFYLVYQPHKPQFSVSGVSVTGINLTSS-- 149

Query: 133 SAISPNFDVAVRADNPNKKIGIYYLTGSSVRIYFSDEKLSDGVLPDFFQPAKNITVFRSS 192
           S  SP   + +R+ N   K+G+ Y  G+   ++F+  KL +G    F QPA N+TV  + 
Sbjct: 150 SPFSPVIRIKLRSQNVKGKLGLIYEKGNEADVFFNGTKLGNGEFTAFKQPAGNVTVIVTV 209

Query: 193 VRGSGVNLSNKATNAMIDSQNRHAVPFKVEIRAPIKLKIGSVKSWKIRVKVFCDVTVDQL 252
           ++GS V L + +   + +SQ +  VPF + I+AP+K K+GSV +W + + V C +TVD+L
Sbjct: 210 LKGSSVKLKSSSRKELTESQKKGKVPFGLRIKAPVKFKVGSVTTWTMTITVDCKITVDKL 269

Query: 253 SAAAKIVSKNCDYSVKL 268
           +A+A + ++NC+  + L
Sbjct: 270 TASATVKTENCETGLSL 280

[Close]

BLAST of Cp4.1LG04g11720 vs. TAIR 10
Match: AT1G65690.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 131.3 bits (329), Expect = 1.1e-30
Identity = 68/199 (34.17%), Postives = 113/199 (56.78%), Query Frame = 0


Query: 71  RRSRSRCCCCLCWLLALLVILIVLLGIAAAVFYLVVRPKSPNYSIDSIAIRGLNLTASSI 130
           ++ RS CC C C+    L++L+V +G +  + YLV +PK P+YSID + +    L     
Sbjct: 56  KKRRSCCCRCFCYTFCFLLLLVVAVGASIGILYLVFKPKLPDYSIDRLQLTRFALNQD-- 115

Query: 131 SAISPNFDVAVRADNPNKKIGIYYLTGSSVRIYFSDEKLSDGVLPDFFQPAKNITVFRSS 190
           S+++  F+V + A NPN+KIGIYY  GS + +++ + +LS+G LP F+Q  +N TV    
Sbjct: 116 SSLTTAFNVTITAKNPNEKIGIYYEDGSKITVWYMEHQLSNGSLPKFYQGHENTTVIYVE 175

Query: 191 VRGSGVNLSNKATNAMIDSQNRHAVPFKVEIRAPIKLKIGSVKSWKIRVKVFCDVTVDQL 250
           + G   N S   T      Q    +P ++ +  P+++K G +K +++R  V C V VD L
Sbjct: 176 MTGQTQNASGLRTTLEEQQQRTGNIPLRIRVNQPVRVKFGKLKLFEVRFLVRCGVFVDSL 235

Query: 251 SA--AAKIVSKNCDYSVKL 268
           +     KI S +C + ++L
Sbjct: 236 ATNNVIKIQSSSCKFRLRL 252

[Close]

BLAST of Cp4.1LG04g11720 vs. TAIR 10
Match: AT5G36970.1 (NDR1/HIN1-like 25 )

HSP 1 Score: 130.6 bits (327), Expect = 1.9e-30
Identity = 69/202 (34.16%), Postives = 116/202 (57.43%), Query Frame = 0


Query: 68  RKHRRSRSRCCCCLCWLLALLVILIVLLGIAAAVFYLVVRPKSPNYSIDSIAIRGLNLTA 127
           R+ + SRS  C C+C+ L +L +LIV++G    + YLV RPK P+Y+ID + +    L  
Sbjct: 49  REKKGSRSCWCRCVCYTLLVLFLLIVIVGAIVGILYLVFRPKFPDYNIDRLQLTRFQLNQ 108

Query: 128 SSISAISPNFDVAVRADNPNKKIGIYYLTGSSVRIYFSDEKLSDGVLPDFFQPAKNITVF 187
               ++S  F+V + A NPN+KIGIYY  GS + + +   ++S+G LP F+Q  +N T+ 
Sbjct: 109 D--LSLSTAFNVTITAKNPNEKIGIYYEDGSKISVLYMQTRISNGSLPKFYQGHENTTII 168

Query: 188 RSSVRGSGVNLSNKATNAMIDSQNRHAVPFKVEIRAPIKLKIGSVKSWKIRVKVFCDVTV 247
              + G   N ++  T      +   ++P ++ +  P+++K+G +K  K+R  V C V+V
Sbjct: 169 LVEMTGFTQNATSLMTTLQEQQRLTGSIPLRIRVTQPVRIKLGKLKLMKVRFLVRCGVSV 228

Query: 248 DQLSA--AAKIVSKNCDYSVKL 268
           D L+A    ++ S NC Y  +L
Sbjct: 229 DSLAANSVIRVRSSNCKYRFRL 248

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g11720 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZVD2	8.1e-66	49.25	NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1	[more]
Q8LD98	1.6e-29	34.17	NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1	[more]
Q9SJ52	2.9e-15	30.93	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]
Q9FNH6	1.8e-12	26.92	NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1	[more]
Q9FI03	1.5e-08	24.67	NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1	[more]

BLAST of Cp4.1LG04g11720 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023531236.1	1.32e-185	100.00	NDR1/HIN1-like protein 13 [Cucurbita pepo subsp. pepo]	[more]
XP_022932868.1	2.98e-182	97.76	NDR1/HIN1-like protein 13 [Cucurbita moschata]	[more]
KAG7022047.1	8.53e-182	97.39	NDR1/HIN1-like protein 13, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6588154.1	1.41e-180	97.01	NDR1/HIN1-like protein 13, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022968088.1	4.05e-180	96.64	NDR1/HIN1-like protein 13 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG04g11720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F2Z0	1.44e-182	97.76	NDR1/HIN1-like protein 13 OS=Cucurbita moschata OX=3662 GN=LOC111439401 PE=4 SV=...	[more]
A0A6J1HX04	1.96e-180	96.64	NDR1/HIN1-like protein 13 OS=Cucurbita maxima OX=3661 GN=LOC111467424 PE=4 SV=1	[more]
A0A6J1JCD4	1.45e-149	83.21	NDR1/HIN1-like protein 13 OS=Cucurbita maxima OX=3661 GN=LOC111485502 PE=4 SV=1	[more]
A0A6J1H954	1.14e-146	82.09	NDR1/HIN1-like protein 13 OS=Cucurbita moschata OX=3662 GN=LOC111461695 PE=4 SV=...	[more]
A0A6J1DWA9	6.11e-140	78.15	NDR1/HIN1-like protein 13 OS=Momordica charantia OX=3673 GN=LOC111024089 PE=4 SV...	[more]

BLAST of Cp4.1LG04g11720 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27080.1	5.7e-67	49.25	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G27080.2	5.7e-67	49.25	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G21130.1	4.9e-50	40.08	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT1G65690.1	1.1e-30	34.17	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G36970.1	1.9e-30	34.16	NDR1/HIN1-like 25	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 141..243 e-value: 1.1E-12 score: 48.4
None	No IPR available	GENE3D	2.60.40.1820		coord: 100..251 e-value: 1.6E-5 score: 26.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39
None	No IPR available	PANTHER	PTHR31852:SF220	PROTEIN YLS9-LIKE	coord: 15..266
None	No IPR available	PANTHER	PTHR31852	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 15..266

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g11720.1	Cp4.1LG04g11720.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane