Cp4.1LG04g11340 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGCTTAGGCAATTTGGAAGGAAATTTAGAAATAATTTTGGACAAAATCAAATATCTTGACCTTTATAATATACCTGCTTGTAAATCAAAACCCCTCCTGGGAGATTTACGGGAATTTCTTGAGGAAGAAGGAAAATGGCGGCAGTTTTGGCCGGAGTGTCTCAGGCGTCGTTACTTTTCTCGCCGCGCATCAGTGGAGCTCTCAGGAGCAACACTTTCTCAGTTCGACGCATGCAATTTCAATCTTCTACCATTGGTAGAGGTAAGCAATCGTGTTTTTACGGCACCGTCATCTGAATCTCTTTGTAGAATTGGGCCGTGTTCATCATTTTGCCATCGGATTCATTCCAATTCAGATTTCATATCCCCTGTTTTCTGCAGGGATTTCCTTCGATTGCAAGACGGTAAGATCTGCTATCCGTGCCACCGATTCCAAAAATGAAGACATCGACATTTATCCAGACACCACTGGCGGTGACTCTTCCAATAAAGGGATTCACGGCGATGGAGGAGGTGGTAGCGGTGGAGGTAAAGGTGGTAGAGGCGATAATGAAGGCAATAGCGGGGAGGAAGAGGAATCTAACACCAACCGCGGGAAGAAAGCTTTGTCAATGTCACAGAAATTAACTCTTGGATATGCTGCACTAGTAGGAGGTCATTGTTTATTCATTATAAATTTGAAACTTAGATTTCAATTCTTAGTCTGTATGAAATGAAATAATGATTATGTTCTTGGTTGCAATTGCAATTTTAATTCAGTCCTTTGTGTTTTTACTTGGCAGTTGGTGGCTTAATGGGATATTTGAAAGGTGGCAGCCAAAAGTCACTATTGGCCGGGGGAGTCTCAGCCACACTGTTGCTTGCTGTTTGTAAACTGCTTCCCAGTAACCCTGTTCTTGCATCGGCCTTGGGTCTTGGTAAGGAATCGGCCGTATCTTTGACTTAATTATGAAAATCTTAGATTTCCCATATCACGTAGCTGAACTGTTATTAATTCTAGATGTTACTTATTAGATATACATTGTACTATTGGGAACTTTGAGTTTTTGAATCCTGGTTAAGAACAATGAGCAAATGCACTTTGCTCTGGGATGTATACACTGTGTCTAGCTTGGAAATAACGAGTCGTCCTGCCCTCCTCCCCTTCTTTATCTTAAATTTGGAAGAGGAACTGTAACAGCCCAAGCTCACCGCTGGCAAATATTGTCCTATTTAGGTTTTCCCTTTTGCTAGGGAGATGTTTCCACACCTTTATAAACAATGCTTCGTTCTCCTTCCCAACCGACGTGAGATCTCACAATCCACCTCCCTTTGGGGCCAGCGTCCTCGTTGGCACTCGTTCCTCTCTCCAATGGGTGTGGGATCTCGCAGTTGTGTTGGGACTAATTCTTTTCATTTGTTCCTAGTAAAAGCCACGTACTACTCACCAACTTCTTTTGGTGAGTCTTGAATGTGGACCTACATTATGGATAAATGGTTCAAGTTATTTCTAAATTCTAAGATTTTGTGTGATGTCCTACATTGGCTGGGGAGGAGAACAAAACACCCTTTATAAGGGTGTGAAAACCTTCCCCTAGTAGACGCGTTTTAAAGCCTTGAGGGGAAGCCCAAAAGGAAAAACCCAAAGAGGATAATATCTGCTAGCGGTGGGCTTGGGTCATTACATTTTGAGGGTAGAATTTGGTTAGTTGTGTTCACAGTTCACCTTTCTTATCTATAGTTTTTATAGTCAAAGTTGTGCTGTTGGGGTTTTTTTGTTGAGGAACATCAGTTGTTTAGCTCTCACATTGGGAACGGAACCGTACTTGTAGCTTGCTTGTAGTGGCAACACAAGGAAGCTACAATCACCTTACATCGTGCTGAGACGACCTTCCGTACCCGAGACCAAAACCAGCCTTGCTAAGGAAGGGTATTGACTGAAGTTATATAGTTCTTTCATTAAGATTCACAACCCCATGTTCATCATCTTGAGGTCAAGATGATACCTAAGTTATGAGCAGTGTAGGCATCTAGAGTAGTTGGTTTCTTTGCTATATGGGTAGCTGAAGTTTCCGCGAGTGTTAATTGTCGGACTCGATAGTTACTGGTTTTAAACTCGGGAATATGATGGCTAACGAAATGGAAGGTAAATATTGAGACTTTTGTAATGAGCTTGGTCCAAGGGAGGCTTTCAAATTTCTCATAGTTAATGTTTGGGTGTGATTTTGAAATGGCTTAAATCACTTTTGTCGTATTCAAAATCACTATGGATTTTGAACTGTTCGATCCTGGATCGTGGATGAAAACTTTGTATAATGTGTAGGTTATGCAAAATCGTGCTTAGTTTCATTTCAATATTTCCTCTTGCATATGAGCAGTTTACAATGATTATACATAAACTCATTGTTTTAAGAAGTCCTAGAAAGAACATGCCATCTGATCTGTTCAAAAGGTGTGCAGAGACATGGAAATAAGACTAATCTAGGGAGGAAAACCAGTGTTCCAGTTCTGTTTTTATTCATACTATTATTTCAAAATCTATTTCTTAATCTACAGGCCTATCAGCTTCACTTTTGGTAGTGATGGGATCTCGTTTCAAGAATTCTGGGAAGATATTTCCAGCCGGTGTCGTATCTCTCGTGTCGTTTATAATGACTGGAGGTTACGTGCATGGAATTTTACGTAGCTCACATTGAACGTACGATGATGAAAAACTGGTAGGGGGCGCTTTCCTCGAGCATGTCTAGTGATAGTCGTAAACTGTAATTGACGAATTTGTTCGTTTTCGTATAATCTATGTTATGTTGATTGGTGTTTTCAGGTCTGTGAAATTGATTTTGATGTGCCTTCCAACTTTGTATGGTGTGCAGTGCTTGTGCTGCCCTCTTTGTTCATCAGGTCTATCTGTGTAATCATCTGAACAAGGAAAGGGAAAGTAAAGTAGGCTGTTGAATGTTCAAAGGTTAAAAGGATTTGTCTTTGTCTTTACGAGCAGATTTGAGGCCGCCTTTGTACCTTAACCCTTCTCCTTCTCGCGAGTTTAGGGGTCCCTTCCAATTGCTTGGATGTCTTCGAAAGCCTCGAGATGATTTTGCGACTTCTTTGTCTTTGTCTTTGTTTTTACGAGCAGATTTGAGACCGCCTTTGTACCTTAACCCTTCTCCTTCTCGCAAGTTTAGGGGTCCCTTCCAATTGCTGGGATGTTTTCGAAAGTCTCGAGATGATTTTGCGACTTCATTCGTTTTTTCAAATTCATT AAGCTTAGGCAATTTGGAAGGAAATTTAGAAATAATTTTGGACAAAATCAAATATCTTGACCTTTATAATATACCTGCTTGTAAATCAAAACCCCTCCTGGGAGATTTACGGGAATTTCTTGAGGAAGAAGGAAAATGGCGGCAGTTTTGGCCGGAGTGTCTCAGGCGTCGTTACTTTTCTCGCCGCGCATCAGTGGAGCTCTCAGGAGCAACACTTTCTCAGTTCGACGCATGCAATTTCAATCTTCTACCATTGGTAGAGGGATTTCCTTCGATTGCAAGACGGTAAGATCTGCTATCCGTGCCACCGATTCCAAAAATGAAGACATCGACATTTATCCAGACACCACTGGCGGTGACTCTTCCAATAAAGGGATTCACGGCGATGGAGGAGGTGGTAGCGGTGGAGGTAAAGGTGGTAGAGGCGATAATGAAGGCAATAGCGGGGAGGAAGAGGAATCTAACACCAACCGCGGGAAGAAAGCTTTGTCAATGTCACAGAAATTAACTCTTGGATATGCTGCACTAGTAGGAGTTGGTGGCTTAATGGGATATTTGAAAGGTGGCAGCCAAAAGTCACTATTGGCCGGGGGAGTCTCAGCCACACTGTTGCTTGCTGTTTGTAAACTGCTTCCCAGTAACCCTGTTCTTGCATCGGCCTTGGGTCTTGGCCTATCAGCTTCACTTTTGGTAGTGATGGGATCTCGTTTCAAGAATTCTGGGAAGATATTTCCAGCCGGTGTCGTATCTCTCGTGTCGTTTATAATGACTGGAGGTTACGTGCATGGAATTTTACGTAGCTCACATTGAACGTACGATGATGAAAAACTGGTCTGTGAAATTGATTTTGATGTGCCTTCCAACTTTGTATGGTGTGCAGTGCTTGTGCTGCCCTCTTTGTTCATCAGGTCTATCTGTGTAATCATCTGAACAAGGAAAGGGAAAGTAAAGTAGGCTGTTGAATGTTCAAAGGTTAAAAGGATTTGTCTTTGTCTTTACGAGCAGATTTGAGGCCGCCTTTGTACCTTAACCCTTCTCCTTCTCGCGAGTTTAGGGGTCCCTTCCAATTGCTTGGATGTCTTCGAAAGCCTCGAGATGATTTTGCGACTTCTTTGTCTTTGTCTTTGTTTTTACGAGCAGATTTGAGACCGCCTTTGTACCTTAACCCTTCTCCTTCTCGCAAGTTTAGGGGTCCCTTCCAATTGCTGGGATGTTTTCGAAAGTCTCGAGATGATTTTGCGACTTCATTCGTTTTTTCAAATTCATT ATGGCGGCAGTTTTGGCCGGAGTGTCTCAGGCGTCGTTACTTTTCTCGCCGCGCATCAGTGGAGCTCTCAGGAGCAACACTTTCTCAGTTCGACGCATGCAATTTCAATCTTCTACCATTGGTAGAGGGATTTCCTTCGATTGCAAGACGGTAAGATCTGCTATCCGTGCCACCGATTCCAAAAATGAAGACATCGACATTTATCCAGACACCACTGGCGGTGACTCTTCCAATAAAGGGATTCACGGCGATGGAGGAGGTGGTAGCGGTGGAGGTAAAGGTGGTAGAGGCGATAATGAAGGCAATAGCGGGGAGGAAGAGGAATCTAACACCAACCGCGGGAAGAAAGCTTTGTCAATGTCACAGAAATTAACTCTTGGATATGCTGCACTAGTAGGAGTTGGTGGCTTAATGGGATATTTGAAAGGTGGCAGCCAAAAGTCACTATTGGCCGGGGGAGTCTCAGCCACACTGTTGCTTGCTGTTTGTAAACTGCTTCCCAGTAACCCTGTTCTTGCATCGGCCTTGGGTCTTGGCCTATCAGCTTCACTTTTGGTAGTGATGGGATCTCGTTTCAAGAATTCTGGGAAGATATTTCCAGCCGGTGTCGTATCTCTCGTGTCGTTTATAATGACTGGAGGTTACGTGCATGGAATTTTACGTAGCTCACATTGA MAAVLAGVSQASLLFSPRISGALRSNTFSVRRMQFQSSTIGRGISFDCKTVRSAIRATDSKNEDIDIYPDTTGGDSSNKGIHGDGGGGSGGGKGGRGDNEGNSGEEEESNTNRGKKALSMSQKLTLGYAALVGVGGLMGYLKGGSQKSLLAGGVSATLLLAVCKLLPSNPVLASALGLGLSASLLVVMGSRFKNSGKIFPAGVVSLVSFIMTGGYVHGILRSSH Homology
BLAST of Cp4.1LG04g11340 vs. ExPASy Swiss-Prot
Match: Q94A32 (Protein FATTY ACID EXPORT 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FAX2 PE=2 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 9.5e-36 Identity = 115/237 (48.52%), Postives = 152/237 (64.14%), Query Frame = 0
BLAST of Cp4.1LG04g11340 vs. ExPASy Swiss-Prot
Match: O64847 (Protein FATTY ACID EXPORT 7 OS=Arabidopsis thaliana OX=3702 GN=FAX7 PE=3 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 4.4e-25 Identity = 63/105 (60.00%), Postives = 82/105 (78.10%), Query Frame = 0
BLAST of Cp4.1LG04g11340 vs. ExPASy Swiss-Prot
Match: Q9CQN6 (Transmembrane protein 14C OS=Mus musculus OX=10090 GN=Tmem14c PE=1 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 4.6e-06 Identity = 39/98 (39.80%), Postives = 49/98 (50.00%), Query Frame = 0
BLAST of Cp4.1LG04g11340 vs. ExPASy Swiss-Prot
Match: Q9C6T7 (Protein FATTY ACID EXPORT 5 OS=Arabidopsis thaliana OX=3702 GN=FAX5 PE=3 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 6.0e-06 Identity = 40/102 (39.22%), Postives = 57/102 (55.88%), Query Frame = 0
BLAST of Cp4.1LG04g11340 vs. ExPASy Swiss-Prot
Match: Q9LJU6 (Protein FATTY ACID EXPORT 6 OS=Arabidopsis thaliana OX=3702 GN=FAX6 PE=3 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 6.0e-06 Identity = 39/102 (38.24%), Postives = 57/102 (55.88%), Query Frame = 0
BLAST of Cp4.1LG04g11340 vs. NCBI nr
Match: XP_023531356.1 (protein FATTY ACID EXPORT 2, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023531357.1 protein FATTY ACID EXPORT 2, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 407 bits (1047), Expect = 1.03e-142 Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0
BLAST of Cp4.1LG04g11340 vs. NCBI nr
Match: KAG7022010.1 (Protein FATTY ACID EXPORT 2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 400 bits (1029), Expect = 5.69e-140 Identity = 220/224 (98.21%), Postives = 223/224 (99.55%), Query Frame = 0
BLAST of Cp4.1LG04g11340 vs. NCBI nr
Match: XP_022929556.1 (protein FATTY ACID EXPORT 2, chloroplastic-like [Cucurbita moschata] >XP_022929562.1 protein FATTY ACID EXPORT 2, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 396 bits (1018), Expect = 2.70e-138 Identity = 218/224 (97.32%), Postives = 222/224 (99.11%), Query Frame = 0
BLAST of Cp4.1LG04g11340 vs. NCBI nr
Match: XP_022968186.1 (protein FATTY ACID EXPORT 2, chloroplastic-like [Cucurbita maxima] >XP_022968194.1 protein FATTY ACID EXPORT 2, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 390 bits (1001), Expect = 1.05e-135 Identity = 214/224 (95.54%), Postives = 218/224 (97.32%), Query Frame = 0
BLAST of Cp4.1LG04g11340 vs. NCBI nr
Match: KAG6588114.1 (Protein FATTY ACID EXPORT 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 354 bits (908), Expect = 1.14e-120 Identity = 197/201 (98.01%), Postives = 199/201 (99.00%), Query Frame = 0
BLAST of Cp4.1LG04g11340 vs. ExPASy TrEMBL
Match: A0A6J1ENG4 (protein FATTY ACID EXPORT 2, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111436103 PE=3 SV=1) HSP 1 Score: 396 bits (1018), Expect = 1.31e-138 Identity = 218/224 (97.32%), Postives = 222/224 (99.11%), Query Frame = 0
BLAST of Cp4.1LG04g11340 vs. ExPASy TrEMBL
Match: A0A6J1HYY3 (protein FATTY ACID EXPORT 2, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111467494 PE=3 SV=1) HSP 1 Score: 390 bits (1001), Expect = 5.10e-136 Identity = 214/224 (95.54%), Postives = 218/224 (97.32%), Query Frame = 0
BLAST of Cp4.1LG04g11340 vs. ExPASy TrEMBL
Match: A0A6J1JDP2 (protein FATTY ACID EXPORT 2, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111484872 PE=3 SV=1) HSP 1 Score: 344 bits (883), Expect = 4.50e-118 Identity = 193/224 (86.16%), Postives = 208/224 (92.86%), Query Frame = 0
BLAST of Cp4.1LG04g11340 vs. ExPASy TrEMBL
Match: A0A1S3BQJ2 (protein FATTY ACID EXPORT 2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103492404 PE=3 SV=1) HSP 1 Score: 344 bits (882), Expect = 5.96e-118 Identity = 195/224 (87.05%), Postives = 205/224 (91.52%), Query Frame = 0
BLAST of Cp4.1LG04g11340 vs. ExPASy TrEMBL
Match: A0A0A0M2B1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G598860 PE=3 SV=1) HSP 1 Score: 343 bits (881), Expect = 8.46e-118 Identity = 194/224 (86.61%), Postives = 207/224 (92.41%), Query Frame = 0
BLAST of Cp4.1LG04g11340 vs. TAIR 10
Match: AT3G43520.1 (Transmembrane proteins 14C ) HSP 1 Score: 151.8 bits (382), Expect = 6.7e-37 Identity = 115/237 (48.52%), Postives = 152/237 (64.14%), Query Frame = 0
BLAST of Cp4.1LG04g11340 vs. TAIR 10
Match: AT2G26240.1 (Transmembrane proteins 14C ) HSP 1 Score: 116.3 bits (290), Expect = 3.1e-26 Identity = 63/105 (60.00%), Postives = 82/105 (78.10%), Query Frame = 0
BLAST of Cp4.1LG04g11340 vs. TAIR 10
Match: AT1G50740.1 (Transmembrane proteins 14C ) HSP 1 Score: 52.8 bits (125), Expect = 4.3e-07 Identity = 40/102 (39.22%), Postives = 57/102 (55.88%), Query Frame = 0
BLAST of Cp4.1LG04g11340 vs. TAIR 10
Match: AT3G20510.1 (Transmembrane proteins 14C ) HSP 1 Score: 52.8 bits (125), Expect = 4.3e-07 Identity = 39/102 (38.24%), Postives = 57/102 (55.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|