Cp4.1LG04g11150 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGTTTTATAAGTACAATCCCCACTTCCCCTTCATCCCTCCACTCTCTGCTTCCGCTTTCCATTTCTCTCTCTCAATCATGTTGGCCAAAGGGCAACGTCCGGTCATCGGAAGGCTATCGGAGCTCCTAGTCTCCCGCTGCCGACCCTCCTTCCTCGACGCCGGCGCTCCCAGCAGCCCCACTTCCCCTTTCGACCTCTCCCCTTCTCCCAGACCCAATCTCAAAAATTACACTGCCGGCGTCGGACTCGGCATCGTCGCCGCCCTCGACACTTCCACATCCGCCGTCCGTGGATCTGAAATTTTAGTCAAACACGCCGTCTGCAGCCCTAAATTGACCTCCCCTCGCCGCCCTGTTCCGATCCCAATCGGATTAGTCGGTGGGTCGTTCTCACCGGAGGAAGACGACGAACTCGACAACGTGGAAGACGAGAATTTCACTTACGTCACAACTCGTGGACCTCTTGAATCATCCACACGCGTCTACTACAACGGCGGTCTCGTCGCTGGTGGGTGTTGCCGGAAACCCCCTCCGTCGTTGAAACCCGCCGATAAACCTCCGCCGCGTCGGACCCCCGATTTCCTCCGATCTTGTCACTCGTGTGGGAAAAATCTAGAGGGGAAAGACATATACATGTACAGGTAATTACAAAAAACACCCAAAACCCATTTTTCTAAACTTGATTGATTGTCGGATCAAAATTCTGATGGGTTGTGACAAATTTTGCAGAGGGGAATCGGCGTTCTGTAGCCCGGAGTGCCGGTCGAGTCAAATAATGAAGGATGAGATCAAGGAACGGTGTCGGTCGGAAGCGAGATCACCGGCGGAGTCTCTGCCAAATTCGCCGTATAACAGAGGAATTTTCTCGACTGGGATTCTTGCGATTTAGGTAAATGAAGCAGAGGAAGAAGAAGGCGGAAACCGCCATGGCAGAGTAGATAGAAAACTTAGAACACGGCTACTAGTTTGGCTGATTCTTGTATAATAATTAAACAGAGAAACAGAGAAACAGAGAATTTTGTTCGTAATATCAAATCTGAGAAGCTGATTTTATTAAAAGATCAAAGATTCTGTACGATAAAAAAACAAGAACATAGAACCAAACTAAATCTCCCTAACAAATCCTAACAAAAAAAAGAAAAAAAGAAAAAAACTAAGCTCCTAACAGAGCGCTTCGACGGCGAGTCGTTTGACAAGATCAGCGGCGCAGTCGGTAGCTCCAAAGGTACCTTCAGAGACATCGATAGCGCAAGATTCTTTCCCAACGCACAAATTCTCAACAATCTTCAATGCATCGTTCTGGCTCTTGCACTCTCCCGTCGTGAAAGACCCACAACTCCCCAATGGATTGCCGTAGCTCGCGAAGGCAATCCCTGAAATCTGTCGGCCTTGACACGACAGCTCCAAACGGTGGTTGTCGTAAGCATGAGCACAAGCTTTCTCCATGCTGATTGTTTTGAAGTTCACCAATGATGGGTTTCCTCCAAATTCCTCGAACAGAACCAGAGTGTTGTCGACGTCGTTGATGAAGGATCTTGGGACATGGTACCACCGCTGTGTTGGGTGGCCACAGTTGCTGACACATTTTTTGTTGTCATATGCGCCACGGTAGTCACATGGGTCCAAGCTGCAACCTTCTTCGGCTATGAAGCTCGGCCAGTAGCGGCCGAGGTTGTGGCCGTTGACCCAAGCAACCCCCTTGCCGAGGCCTTGTAAGTCTAGAGCCACTGGGTCGGTTCCTAATGGAGCTTTGAAGGTTGTTTTGTACCATGTCATCATTTTGTTTACTGGGAGATTCTCCGATTGCCATTTGGCGGCGAATCGGGAATCAGAACTGAAGAGACGATTTTCGAAGCCGTGTAATCCGATTTCGTATGTCCATTTGTGAGATGAGAGATCTTTTATGAGTGTTTCATCGCCGTTGCGGCCGATTAATTCAACTGGGCCGGGGATTCCTGATTGAACCATGTCGAAGAAGGGCCCGTAGTTCTGAAAAACAGAGCAAAATATGTGTGATTTGTTGATGAGAAAAATCAGAAACAGAGCTCGGAGTTACGAACCTGGTAGCCGACGGTGGCGCTGAGAAGAGAGATTATGTTCTTTCCTGGCTTTAATTTCACTTGTCTCTCCATAAAGTAAGTGAAAATTCCATATGAAGCCCATTGGGAACCGATATGTTCGCCGTTGACGAAGGCGTGGAGGACATGGCCGCTGCCGTTGATTCGCAGAGTCATGTCGTTGCTCCAAATCCGATCGGCTTTCTTCAAGTAAACGCTGTAATTTGGGGAAAAACATCAAATTAAGGAAATGGGTAAGGCTTCGGTGAAATTTGTGTTCGATGTCGAGGATTTTACCTTGTCATGTACCAGAGATAATCACTGGCGTCGTTAGCGGCAGCTTTCTGATCAAGAAGCATATTAGCACTGATTTGTCCTTTGCCTAATCTCGCGGTGGCGTCGAGATTCTCTGGCCGCCACAACCATTTCAACGCCGCCGGTTCTTCCTCCGCCTTGTTTTCCTTCTTCACAATCACGGATGTTTGTGTGTTCACTTTAGCTGTGTTGTAAACCTCTGTTTGACAGTCGGGAAGAATGCTGACGGACCACGCCGGAACTTTGAAGTCCTTTCCGTTGTAGCTCACCGTCGCGTCGTTTGTTACGTTCGCGTTGCTGAAGAAACAAGCCGACCCTTCTTTTGTAGTGTATTTGGTGATCTAAATTGAGAAAAATAACAATGTTTAA AGTTTTATAAGTACAATCCCCACTTCCCCTTCATCCCTCCACTCTCTGCTTCCGCTTTCCATTTCTCTCTCTCAATCATGTTGGCCAAAGGGCAACGTCCGGTCATCGGAAGGCTATCGGAGCTCCTAGTCTCCCGCTGCCGACCCTCCTTCCTCGACGCCGGCGCTCCCAGCAGCCCCACTTCCCCTTTCGACCTCTCCCCTTCTCCCAGACCCAATCTCAAAAATTACACTGCCGGCGTCGGACTCGGCATCGTCGCCGCCCTCGACACTTCCACATCCGCCGTCCGTGGATCTGAAATTTTAGTCAAACACGCCGTCTGCAGCCCTAAATTGACCTCCCCTCGCCGCCCTGTTCCGATCCCAATCGGATTAGTCGGTGGGTCGTTCTCACCGGAGGAAGACGACGAACTCGACAACGTGGAAGACGAGAATTTCACTTACGTCACAACTCGTGGACCTCTTGAATCATCCACACGCGTCTACTACAACGGCGGTCTCGTCGCTGGTGGGTGTTGCCGGAAACCCCCTCCGTCGTTGAAACCCGCCGATAAACCTCCGCCGCGTCGGACCCCCGATTTCCTCCGATCTTGTCACTCGTGTGGGAAAAATCTAGAGGGGAAAGACATATACATGTACAGAGGGGAATCGGCGTTCTGTAGCCCGGAGTGCCGGTCGAGTCAAATAATGAAGGATGAGATCAAGGAACGGTGTCGGTCGGAAGCGAGATCACCGGCGGAGTCTCTGCCAAATTCGCCGTATAACAGAGGAATTTTCTCGACTGGGATTCTTGCGATTTAGGTAAATGAAGCAGAGGAAGAAGAAGGCGGAAACCGCCATGGCAGAGTAGATAGAAAACTTAGAACACGGCTACTAGTTTGGCTGATTCTTGTATAATAATTAAACAGAGAAACAGAGAAACAGAGAATTTTGTTCGTAATATCAAATCTGAGAAGCTGATTTTATTAAAAGATCAAAGATTCTGTACGATAAAAAAACAAGAACATAGAACCAAACTAAATCTCCCTAACAAATCCTAACAAAAAAAAGAAAAAAAGAAAAAAACTAAGCTCCTAACAGAGCGCTTCGACGGCGAGTCGTTTGACAAGATCAGCGGCGCAGTCGGTAGCTCCAAAGGTACCTTCAGAGACATCGATAGCGCAAGATTCTTTCCCAACGCACAAATTCTCAACAATCTTCAATGCATCGTTCTGGCTCTTGCACTCTCCCGTCGTGAAAGACCCACAACTCCCCAATGGATTGCCGTAGCTCGCGAAGGCAATCCCTGAAATCTGTCGGCCTTGACACGACAGCTCCAAACGGTGGTTGTCGTAAGCATGAGCACAAGCTTTCTCCATGCTGATTGTTTTGAAGTTCACCAATGATGGGTTTCCTCCAAATTCCTCGAACAGAACCAGAGTGTTGTCGACGTCGTTGATGAAGGATCTTGGGACATGGTACCACCGCTGTGTTGGGTGGCCACAGTTGCTGACACATTTTTTGTTGTCATATGCGCCACGGTAGTCACATGGGTCCAAGCTGCAACCTTCTTCGGCTATGAAGCTCGGCCAGTAGCGGCCGAGGTTGTGGCCGTTGACCCAAGCAACCCCCTTGCCGAGGCCTTGTAAGTCTAGAGCCACTGGGTCGGTTCCTAATGGAGCTTTGAAGGTTGTTTTGTACCATGTCATCATTTTGTTTACTGGGAGATTCTCCGATTGCCATTTGGCGGCGAATCGGGAATCAGAACTGAAGAGACGATTTTCGAAGCCGTGTAATCCGATTTCGTATGTCCATTTGTGAGATGAGAGATCTTTTATGAGTGTTTCATCGCCGTTGCGGCCGATTAATTCAACTGGGCCGGGGATTCCTGATTGAACCATGTCGAAGAAGGGCCCGTAGTTCTGAAAAACAGAGCAAAATATGTGTGATTTGTTGATGAGAAAAATCAGAAACAGAGCTCGGAGTTACGAACCTGGTAGCCGACGGTGGCGCTGAGAAGAGAGATTATGTTCTTTCCTGGCTTTAATTTCACTTGTCTCTCCATAAAGTAAGTGAAAATTCCATATGAAGCCCATTGGGAACCGATATGTTCGCCGTTGACGAAGGCGTGGAGGACATGGCCGCTGCCGTTGATTCGCAGAGTCATGTCGTTGCTCCAAATCCGATCGGCTTTCTTCAAGTAAACGCTGTAATTTGGGGAAAAACATCAAATTAAGGAAATGGGTAAGGCTTCGGTGAAATTTGTGTTCGATGTCGAGGATTTTACCTTGTCATGTACCAGAGATAATCACTGGCGTCGTTAGCGGCAGCTTTCTGATCAAGAAGCATATTAGCACTGATTTGTCCTTTGCCTAATCTCGCGGTGGCGTCGAGATTCTCTGGCCGCCACAACCATTTCAACGCCGCCGGTTCTTCCTCCGCCTTGTTTTCCTTCTTCACAATCACGGATGTTTGTGTGTTCACTTTAGCTGTGTTGTAAACCTCTGTTTGACAGTCGGGAAGAATGCTGACGGACCACGCCGGAACTTTGAAGTCCTTTCCGTTGTAGCTCACCGTCGCGTCGTTTGTTACGTTCGCGTTGCTGAAGAAACAAGCCGACCCTTCTTTTGTAGTGTATTTGGTGATCTAAATTGAGAAAAATAACAATGTTTAA ATGTTGGCCAAAGGGCAACGTCCGGTCATCGGAAGGCTATCGGAGCTCCTAGTCTCCCGCTGCCGACCCTCCTTCCTCGACGCCGGCGCTCCCAGCAGCCCCACTTCCCCTTTCGACCTCTCCCCTTCTCCCAGACCCAATCTCAAAAATTACACTGCCGGCGTCGGACTCGGCATCGTCGCCGCCCTCGACACTTCCACATCCGCCGTCCGTGGATCTGAAATTTTAGTCAAACACGCCGTCTGCAGCCCTAAATTGACCTCCCCTCGCCGCCCTGTTCCGATCCCAATCGGATTAGTCGGTGGGTCGTTCTCACCGGAGGAAGACGACGAACTCGACAACGTGGAAGACGAGAATTTCACTTACGTCACAACTCGTGGACCTCTTGAATCATCCACACGCGTCTACTACAACGGCGGTCTCGTCGCTGGTGGGTGTTGCCGGAAACCCCCTCCGTCGTTGAAACCCGCCGATAAACCTCCGCCGCGTCGGACCCCCGATTTCCTCCGATCTTGTCACTCGTGTGGGAAAAATCTAGAGGGGAAAGACATATACATGTACAGAGGGGAATCGGCGTTCTGTAGCCCGGAGTGCCGGTCGAGTCAAATAATGAAGGATGAGATCAAGGAACGGTGTCGGTCGGAAGCGAGATCACCGGCGGAGTCTCTGCCAAATTCGCCGTATAACAGAGGAATTTTCTCGACTGGGATTCTTGCGATTTAG MLAKGQRPVIGRLSELLVSRCRPSFLDAGAPSSPTSPFDLSPSPRPNLKNYTAGVGLGIVAALDTSTSAVRGSEILVKHAVCSPKLTSPRRPVPIPIGLVGGSFSPEEDDELDNVEDENFTYVTTRGPLESSTRVYYNGGLVAGGCCRKPPPSLKPADKPPPRRTPDFLRSCHSCGKNLEGKDIYMYRGESAFCSPECRSSQIMKDEIKERCRSEARSPAESLPNSPYNRGIFSTGILAI Homology
BLAST of Cp4.1LG04g11150 vs. ExPASy Swiss-Prot
Match: Q8GYX2 (FCS-Like Zinc finger 14 OS=Arabidopsis thaliana OX=3702 GN=FLZ14 PE=1 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 8.6e-27 Identity = 100/262 (38.17%), Postives = 132/262 (50.38%), Query Frame = 0
BLAST of Cp4.1LG04g11150 vs. ExPASy Swiss-Prot
Match: Q8GRN0 (FCS-Like Zinc finger 13 OS=Arabidopsis thaliana OX=3702 GN=FLZ13 PE=1 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 3.6e-25 Identity = 89/242 (36.78%), Postives = 127/242 (52.48%), Query Frame = 0
BLAST of Cp4.1LG04g11150 vs. ExPASy Swiss-Prot
Match: F4IE21 (FCS-Like Zinc finger 12 OS=Arabidopsis thaliana OX=3702 GN=FLZ12 PE=1 SV=2) HSP 1 Score: 88.6 bits (218), Expect = 1.1e-16 Identity = 76/219 (34.70%), Postives = 106/219 (48.40%), Query Frame = 0
BLAST of Cp4.1LG04g11150 vs. ExPASy Swiss-Prot
Match: Q8LGS1 (Protein MARD1 OS=Arabidopsis thaliana OX=3702 GN=MARD1 PE=1 SV=2) HSP 1 Score: 67.8 bits (164), Expect = 1.9e-10 Identity = 39/100 (39.00%), Postives = 57/100 (57.00%), Query Frame = 0
BLAST of Cp4.1LG04g11150 vs. ExPASy Swiss-Prot
Match: Q9LYE4 (FCS-Like Zinc finger 10 OS=Arabidopsis thaliana OX=3702 GN=FLZ10 PE=1 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 4.8e-09 Identity = 55/163 (33.74%), Postives = 74/163 (45.40%), Query Frame = 0
BLAST of Cp4.1LG04g11150 vs. NCBI nr
Match: XP_023529882.1 (uncharacterized protein LOC111792603 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 492 bits (1266), Expect = 1.44e-175 Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 0
BLAST of Cp4.1LG04g11150 vs. NCBI nr
Match: KAG6588103.1 (FCS-Like Zinc finger 14, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021988.1 Protein MARD1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 488 bits (1257), Expect = 3.39e-174 Identity = 237/240 (98.75%), Postives = 240/240 (100.00%), Query Frame = 0
BLAST of Cp4.1LG04g11150 vs. NCBI nr
Match: XP_022931969.1 (uncharacterized protein LOC111438247 [Cucurbita moschata]) HSP 1 Score: 479 bits (1233), Expect = 1.55e-170 Identity = 234/240 (97.50%), Postives = 237/240 (98.75%), Query Frame = 0
BLAST of Cp4.1LG04g11150 vs. NCBI nr
Match: XP_022968133.1 (uncharacterized protein LOC111467458 [Cucurbita maxima]) HSP 1 Score: 472 bits (1215), Expect = 8.58e-168 Identity = 231/240 (96.25%), Postives = 233/240 (97.08%), Query Frame = 0
BLAST of Cp4.1LG04g11150 vs. NCBI nr
Match: XP_038878865.1 (FCS-Like Zinc finger 14-like [Benincasa hispida]) HSP 1 Score: 384 bits (986), Expect = 6.57e-133 Identity = 201/243 (82.72%), Postives = 211/243 (86.83%), Query Frame = 0
BLAST of Cp4.1LG04g11150 vs. ExPASy TrEMBL
Match: A0A6J1EVR0 (uncharacterized protein LOC111438247 OS=Cucurbita moschata OX=3662 GN=LOC111438247 PE=3 SV=1) HSP 1 Score: 479 bits (1233), Expect = 7.48e-171 Identity = 234/240 (97.50%), Postives = 237/240 (98.75%), Query Frame = 0
BLAST of Cp4.1LG04g11150 vs. ExPASy TrEMBL
Match: A0A6J1HX52 (uncharacterized protein LOC111467458 OS=Cucurbita maxima OX=3661 GN=LOC111467458 PE=3 SV=1) HSP 1 Score: 472 bits (1215), Expect = 4.16e-168 Identity = 231/240 (96.25%), Postives = 233/240 (97.08%), Query Frame = 0
BLAST of Cp4.1LG04g11150 vs. ExPASy TrEMBL
Match: A0A6J1H9U9 (uncharacterized protein LOC111461446 OS=Cucurbita moschata OX=3662 GN=LOC111461446 PE=3 SV=1) HSP 1 Score: 375 bits (963), Expect = 1.13e-129 Identity = 189/243 (77.78%), Postives = 202/243 (83.13%), Query Frame = 0
BLAST of Cp4.1LG04g11150 vs. ExPASy TrEMBL
Match: A0A6J1JJ16 (uncharacterized protein LOC111485554 OS=Cucurbita maxima OX=3661 GN=LOC111485554 PE=3 SV=1) HSP 1 Score: 370 bits (951), Expect = 8.12e-128 Identity = 188/245 (76.73%), Postives = 203/245 (82.86%), Query Frame = 0
BLAST of Cp4.1LG04g11150 vs. ExPASy TrEMBL
Match: A0A5D3CHY1 (DUF581 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G001370 PE=3 SV=1) HSP 1 Score: 368 bits (945), Expect = 4.67e-127 Identity = 195/244 (79.92%), Postives = 208/244 (85.25%), Query Frame = 0
BLAST of Cp4.1LG04g11150 vs. TAIR 10
Match: AT5G20700.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 122.1 bits (305), Expect = 6.1e-28 Identity = 100/262 (38.17%), Postives = 132/262 (50.38%), Query Frame = 0
BLAST of Cp4.1LG04g11150 vs. TAIR 10
Match: AT1G74940.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 116.7 bits (291), Expect = 2.6e-26 Identity = 89/242 (36.78%), Postives = 127/242 (52.48%), Query Frame = 0
BLAST of Cp4.1LG04g11150 vs. TAIR 10
Match: AT1G19200.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 86.3 bits (212), Expect = 3.7e-17 Identity = 72/195 (36.92%), Postives = 97/195 (49.74%), Query Frame = 0
BLAST of Cp4.1LG04g11150 vs. TAIR 10
Match: AT3G63210.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 67.8 bits (164), Expect = 1.4e-11 Identity = 39/100 (39.00%), Postives = 57/100 (57.00%), Query Frame = 0
BLAST of Cp4.1LG04g11150 vs. TAIR 10
Match: AT5G11460.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 63.2 bits (152), Expect = 3.4e-10 Identity = 55/163 (33.74%), Postives = 74/163 (45.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|