Cp4.1LG04g11030 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG04g11030
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionProtein ELF4-LIKE
LocationCp4.1LG04: 9145773 .. 9148780 (+)
RNA-Seq ExpressionCp4.1LG04g11030
SyntenyCp4.1LG04g11030
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAAGCGTGACTGTCAAATCCTATATATTCCCTCTTTTTCCATTTCTCTCACTTCCCCTATCTCAGTTTCTCTCTCTAGAAGAACCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATCTCTATCTCTCTCTATCTCTCTCCGTTGTAATTCTCAAGGATTCAGAGAGCGGGGGCGGTAGGGGCGGTAGGGGCTTGTTTCGGAGATTCCATTGAAGCCGCGAACCTTTTTTCTTCTGTTTGGATTTCTGTGTTCTTTGTGTGCTTTCCTTTTGCCCTTTTGCTTTTCTCTCTTCCTTTATACTGCGCTCCTCGTCCTTCCGAACCATTTCTTCATTTTTCAATCCGTGTGTATCTTCTTCTCTCCCGATATAATGTTCCAGATTTTCAAGGTACTCACTCTTTACTAATCTTTCTCAATCTCTTTGTACGATTATAAAAGGAATCACTAATCATAATCAATCTCTTCGGAGTTCCTTTTTTTTTTTTTGTGTTTCTGTTTCTCTGAGACATTGATTTTGATATTCTCTGCCGGTGTTGCTGTTTTTTATTCTCTGATTTTGTGATTCTTTTGGAATTAGTGTTTTAATTTGACGATTCTGGCTTCTGCGTTGTGATTTTTGTAATGAATTGAGTTCTGGGTTGTGATTTGAATTTGTGTTTGTTGATGAATTTGCCGTGTTTTGGGAGTTTTGGAGAGTTCGTAATCCTTTCCAATCTCGAGATGTGTTTGAGGAAATTTGGATTTAGTTTCTCTTTGAATGTGTTCATGAGTTCATAGGTTGAGTATTGTTTGAGAGGGTCAATAATGGTGTCTCGCTATTCAGATGCCCTGATGGGCTCATATTTCTGCATCATTGACTGGTTTTTTTGGGTCCTTGGAATACCTGTTTAGAACTCTGAGCCTTAGTGGGTTTTCTCTGAGCACATTAAAAAAGGTTCCCTTTTATAGAAATGTTTTCTGCTTTTTTCTCTATCTCATCATAAATCAATTAAAATATCACATAATTATTATAAACCCTCCATCTTTGTTTATCTGATTCCTCTGTTTCGATTCTGGATTGTGGTGCTCATCATTCCTTTCTACTGTTCTTGTCTCATGTGCTTAAATTTCAAATTAAACAGAAATTCATGAATTACAAACTCATGATCTTCTTGTTGTTCTTCTTCCATGTTCTTATGCTGAGAAGGTTCTGATTTGATAGACTTCTCAGCTGTAAAACTATGGAGGGCGACACATTTTCAGGGATTGGGAGTACTGCACAGATCGATAGCAAGATTTTACAGACATTTCATAAGAACTTTGTTCAAGTTCAAAACATATTGGATCAAAACAAGCTGCTGATTAGCGAGATAAACCAAAACCACGAATCAAAGATCCCTGATAATCTAAACAGAAATGTGGGTCTGATCCGAGAATTAAACAACAATATCAGGAGGGTTGTTGACTTATATGCTGATCTTTCATGTTCCTTCACCAGATCCATGGAAGTTTCTTCAGAAGGTGATTCCAGTGGAGCTTTGAAGTCAGATGGTAAAGCAGGCCAGAAGAGGAACAGGGCTGTCTAGGCCACAAAATTCTTACTTCTCCATTCTTTGGCGTGGTGGGACACAAGGAAAACATTGCTCATCACTGTCAAAAAAAGGCTAGTATTTCAATAGATTCCCTGTAACTTTCTTGTATGGTTTAACTCTCTAGTTTTACTTAGTTCTTAATCATCCTTGCATTGCTTAGAGAAAAATAATCGTCCTAATTCTGTATTTAATTGCTGTTCTCAACTGTGGATCTGCTTGGCGAAATTAGCATAAAGTTCTCATCTGATTTCTTGTTTTGGTTTCAACTTTGATGCCCTGTGTACCTGCTTAGACTTGGTTAGATAGCACTTGTTTCTTGTCTTAGTTTTTTAGAGATTCAAAACTCTGATCTGTTGTTGAGTGATGATATATGTGAAAGATTCAAAATTCTAACGTTTTGATCGATGATATATGTGAATTGACTATCAAATACGACTAGAAATGATTACCATACACAAGAAACAATAAATAAGAACAAATTTCTGCCCCTAATGGTACAAAAGTTCTTTCATCAATACTTTTTTGGCCAAAATCTCATCTGGGTTCTAGCTTTCTGCCCCTAATTATAGCTTATAGGCTACTGTTTTGGGTCTTATGAACTCAGATCTCTTCTGTTGGTGGTTTCTGCTAAAATAAAAATTTACTGTCCCTGATTGAGCTTGTTAGATCCTACATTGGTTAGGGGGAGAACGAACCATTCTTTATAAGGGTGTGGAAGCCTCTACCTAGAAGATGCGTTTTAAAGACCTTGGGGAGAAGCCTAAAAGAGAAAGCCCAAAGAGGACATTCCTAGAAGATGCCTTTCGAAAAACCGTAAGGGGAAGTCTAAAAGGGAAAACACAAAGAGGACAATATTTGTTCTACAGAAACGGAAGATAACTCTGAACATCAGGATTTAGAGCTTTTGATGTTCATCAAACACCAACCAAACAGAATCTGAGATAAAGGATGATTAGCTTTTTGACCCTTTTTGTTTGCGTTTTGTTTTGGAATTATAGATATTATGGAAGTCTTGCATTCTATTCCATGTGAACAGTTACCATTTCTTGGTGGGATCTGCTTTGCAAATTATAGTATTCTTTGGATAGTTCAAAATAAAGCACTCAGAGTTCAAACAGCCATTCTGAAGTAGAAGACAAAGGTTCCAAAACAAGCCTCTGTTCTGTGGATTGGGCAATGACCTCTAAAATTTCCCACCCTTCTTTTTCTTTTACCTTACAAAAAGGTATATTCTTGAACAACAAAAGCTGGAAAAACACTTCAAGTTATGTTCCATAAGTCTTGTTTGATCATGATTTGATTCCTCAACCCCTTCTCCTTTTCCTTCTTATCTTTGTGCTTCAACCTTTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTCTTTCTAGTGGACCCGTTTCATACAATTCTCATACTCGCAAGATC

mRNA sequence

TGAAGCGTGACTGTCAAATCCTATATATTCCCTCTTTTTCCATTTCTCTCACTTCCCCTATCTCAGTTTCTCTCTCTAGAAGAACCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATCTCTATCTCTCTCTATCTCTCTCCGTTGTAATTCTCAAGGATTCAGAGAGCGGGGGCGGTAGGGGCGGTAGGGGCTTGTTTCGGAGATTCCATTGAAGCCGCGAACCTTTTTTCTTCTGTTTGGATTTCTGTGTTCTTTGTGTGCTTTCCTTTTGCCCTTTTGCTTTTCTCTCTTCCTTTATACTGCGCTCCTCGTCCTTCCGAACCATTTCTTCATTTTTCAATCCGTGTGTATCTTCTTCTCTCCCGATATAATGTTCCAGATTTTCAAGGTTCTGATTTGATAGACTTCTCAGCTGTAAAACTATGGAGGGCGACACATTTTCAGGGATTGGGAGTACTGCACAGATCGATAGCAAGATTTTACAGACATTTCATAAGAACTTTGTTCAAGTTCAAAACATATTGGATCAAAACAAGCTGCTGATTAGCGAGATAAACCAAAACCACGAATCAAAGATCCCTGATAATCTAAACAGAAATATCCATGGAAGTTTCTTCAGAAGTGGACCCGTTTCATACAATTCTCATACTCGCAAGATC

Coding sequence (CDS)

ATGGAGGGCGACACATTTTCAGGGATTGGGAGTACTGCACAGATCGATAGCAAGATTTTACAGACATTTCATAAGAACTTTGTTCAAGTTCAAAACATATTGGATCAAAACAAGCTGCTGATTAGCGAGATAAACCAAAACCACGAATCAAAGATCCCTGATAATCTAAACAGAAATATCCATGGAAGTTTCTTCAGAAGTGGACCCGTTTCATACAATTCTCATACTCGCAAGATC

Protein sequence

MEGDTFSGIGSTAQIDSKILQTFHKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNIHGSFFRSGPVSYNSHTRKI
Homology
[Close]
BLAST of Cp4.1LG04g11030 vs. ExPASy Swiss-Prot
Match: Q8S8F5 (Protein ELF4-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=EFL3 PE=3 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.6e-17
Identity = 46/61 (75.41%), Postives = 52/61 (85.25%), Query Frame = 0 

Query: 1  MEGDTFSG-IGSTAQIDSKILQTFHKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRN 60
          MEGDT S  +GS  Q+D KILQTF K+FVQVQNILD N+LLI+EINQNHESKIPDNL RN
Sbjct: 1  MEGDTISRMMGSGVQMDGKILQTFEKSFVQVQNILDHNRLLINEINQNHESKIPDNLGRN 60

[Close]
BLAST of Cp4.1LG04g11030 vs. ExPASy Swiss-Prot
Match: Q570U6 (Protein ELF4-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=EFL4 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 6.6e-16
Identity = 40/60 (66.67%), Postives = 48/60 (80.00%), Query Frame = 0 

Query: 1  MEGDTFSGIGSTAQIDSKILQTFHKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNI 60
          MEGD  SG G    +D K+LQ+F K+FV VQ+ILDQN+LLI+EINQNHESK PDNL RN+
Sbjct: 1  MEGDVLSGFGDRHNMDGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGRNV 60

[Close]
BLAST of Cp4.1LG04g11030 vs. ExPASy Swiss-Prot
Match: Q94BS8 (Protein ELF4-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=EFL2 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 8.6e-16
Identity = 40/60 (66.67%), Postives = 49/60 (81.67%), Query Frame = 0 

Query: 1  MEGDTFSGIGSTAQIDSKILQTFHKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNI 60
          MEGD +SG G   Q+D K+LQ F K+FVQVQ+ILDQN+LLI+EINQNHESK  D+L RN+
Sbjct: 5  MEGDVYSGFGERYQMDGKLLQNFQKSFVQVQDILDQNRLLINEINQNHESKQADHLGRNV 64

[Close]
BLAST of Cp4.1LG04g11030 vs. ExPASy Swiss-Prot
Match: O04211 (Protein EARLY FLOWERING 4 OS=Arabidopsis thaliana OX=3702 GN=ELF4 PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 1.2e-04
Identity = 18/45 (40.00%), Postives = 34/45 (75.56%), Query Frame = 0 

Query: 16 DSKILQTFHKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNI 61
          D  + +   +NF QVQ++LD+N+ LI ++N NH+S++ DN+++N+
Sbjct: 22 DPAMWENLDRNFRQVQSVLDRNRSLIQQVNDNHQSRMADNMSKNV 66

[Close]
BLAST of Cp4.1LG04g11030 vs. ExPASy Swiss-Prot
Match: O80877 (Protein ELF4-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=EFL1 PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 1.5e-04
Identity = 24/59 (40.68%), Postives = 34/59 (57.63%), Query Frame = 0 

Query: 2  EGDTFSGIGSTAQIDSKILQTFHKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNI 61
          E D      S A  D ++  T    F + Q  LDQN+ LI  +N+NH S+IPDN++RN+
Sbjct: 20 ENDGEDVAASAAVEDVEVWDTLSNGFKRAQLYLDQNRDLIQRVNENHMSRIPDNVSRNV 78

[Close]
BLAST of Cp4.1LG04g11030 vs. NCBI nr
Match: XP_022933909.1 (protein ELF4-LIKE 4-like [Cucurbita moschata] >XP_022933910.1 protein ELF4-LIKE 4-like [Cucurbita moschata] >XP_022933911.1 protein ELF4-LIKE 4-like [Cucurbita moschata] >XP_022968596.1 protein ELF4-LIKE 4-like [Cucurbita maxima] >XP_022968604.1 protein ELF4-LIKE 4-like [Cucurbita maxima] >XP_022968613.1 protein ELF4-LIKE 4-like [Cucurbita maxima] >XP_023529215.1 protein ELF4-LIKE 4-like [Cucurbita pepo subsp. pepo] >XP_023529216.1 protein ELF4-LIKE 4-like [Cucurbita pepo subsp. pepo] >KAG6588067.1 Protein ELF4-LIKE 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 119 bits (297), Expect = 1.38e-32
Identity = 59/60 (98.33%), Postives = 60/60 (100.00%), Query Frame = 0 

Query: 1  MEGDTFSGIGSTAQIDSKILQTFHKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNI 60
          MEGDTFSGIGSTAQIDSKILQTFHKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRN+
Sbjct: 1  MEGDTFSGIGSTAQIDSKILQTFHKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV 60

[Close]
BLAST of Cp4.1LG04g11030 vs. NCBI nr
Match: KAG7021961.1 (Protein ELF4-LIKE 4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 119 bits (297), Expect = 1.46e-32
Identity = 59/60 (98.33%), Postives = 60/60 (100.00%), Query Frame = 0 

Query: 1  MEGDTFSGIGSTAQIDSKILQTFHKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNI 60
          MEGDTFSGIGSTAQIDSKILQTFHKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRN+
Sbjct: 1  MEGDTFSGIGSTAQIDSKILQTFHKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV 60

[Close]
BLAST of Cp4.1LG04g11030 vs. NCBI nr
Match: XP_022961237.1 (protein ELF4-LIKE 4-like [Cucurbita moschata] >XP_022961238.1 protein ELF4-LIKE 4-like [Cucurbita moschata] >XP_022961239.1 protein ELF4-LIKE 4-like [Cucurbita moschata] >XP_022987288.1 protein ELF4-LIKE 4-like [Cucurbita maxima] >XP_022987289.1 protein ELF4-LIKE 4-like [Cucurbita maxima] >XP_022987290.1 protein ELF4-LIKE 4-like [Cucurbita maxima] >XP_023516901.1 protein ELF4-LIKE 4-like [Cucurbita pepo subsp. pepo] >XP_023516902.1 protein ELF4-LIKE 4-like [Cucurbita pepo subsp. pepo] >XP_023516903.1 protein ELF4-LIKE 4-like [Cucurbita pepo subsp. pepo] >KAG6590027.1 Protein ELF4-LIKE 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023688.1 Protein ELF4-LIKE 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 112 bits (280), Expect = 5.35e-30
Identity = 55/60 (91.67%), Postives = 59/60 (98.33%), Query Frame = 0 

Query: 1  MEGDTFSGIGSTAQIDSKILQTFHKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNI 60
          MEGDTFSG+GS+AQID+KILQTF KNFVQVQNILDQNKLLISEINQNHESKIPDNLNRN+
Sbjct: 1  MEGDTFSGLGSSAQIDTKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV 60

[Close]
BLAST of Cp4.1LG04g11030 vs. NCBI nr
Match: XP_004144022.1 (protein ELF4-LIKE 4 [Cucumis sativus] >XP_008450908.1 PREDICTED: protein ELF4-LIKE 4 [Cucumis melo] >XP_008450909.1 PREDICTED: protein ELF4-LIKE 4 [Cucumis melo] >XP_008450910.1 PREDICTED: protein ELF4-LIKE 4 [Cucumis melo] >XP_011660014.1 protein ELF4-LIKE 4 [Cucumis sativus] >XP_031736193.1 protein ELF4-LIKE 4 [Cucumis sativus] >XP_031736194.1 protein ELF4-LIKE 4 [Cucumis sativus] >XP_038878351.1 protein ELF4-LIKE 4 [Benincasa hispida] >XP_038878352.1 protein ELF4-LIKE 4 [Benincasa hispida] >KAA0055791.1 protein ELF4-LIKE 4-like isoform X2 [Cucumis melo var. makuwa] >KGN66281.1 hypothetical protein Csa_007334 [Cucumis sativus] >TYK10042.1 protein ELF4-LIKE 4-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 111 bits (278), Expect = 1.08e-29
Identity = 55/60 (91.67%), Postives = 58/60 (96.67%), Query Frame = 0 

Query: 1  MEGDTFSGIGSTAQIDSKILQTFHKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNI 60
          MEGDTFSG+GS+ QIDSKILQTF KNFVQVQNILDQNKLLISEINQNHESKIPDNLNRN+
Sbjct: 1  MEGDTFSGLGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV 60

[Close]
BLAST of Cp4.1LG04g11030 vs. NCBI nr
Match: XP_022147541.1 (protein ELF4-LIKE 4 [Momordica charantia])

HSP 1 Score: 106 bits (265), Expect = 1.02e-27
Identity = 53/60 (88.33%), Postives = 56/60 (93.33%), Query Frame = 0 

Query: 1  MEGDTFSGIGSTAQIDSKILQTFHKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNI 60
          MEGDTFSG+GS AQID KILQ F KNFVQVQ+ILDQNKLLISEINQNHESKIPDNLNRN+
Sbjct: 1  MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNV 60

[Close]
BLAST of Cp4.1LG04g11030 vs. ExPASy TrEMBL
Match: A0A6J1I047 (protein ELF4-LIKE 4-like OS=Cucurbita maxima OX=3661 GN=LOC111467765 PE=3 SV=1)

HSP 1 Score: 119 bits (297), Expect = 6.68e-33
Identity = 59/60 (98.33%), Postives = 60/60 (100.00%), Query Frame = 0 

Query: 1  MEGDTFSGIGSTAQIDSKILQTFHKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNI 60
          MEGDTFSGIGSTAQIDSKILQTFHKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRN+
Sbjct: 1  MEGDTFSGIGSTAQIDSKILQTFHKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV 60

[Close]
BLAST of Cp4.1LG04g11030 vs. ExPASy TrEMBL
Match: A0A6J1F126 (protein ELF4-LIKE 4-like OS=Cucurbita moschata OX=3662 GN=LOC111441179 PE=3 SV=1)

HSP 1 Score: 119 bits (297), Expect = 6.68e-33
Identity = 59/60 (98.33%), Postives = 60/60 (100.00%), Query Frame = 0 

Query: 1  MEGDTFSGIGSTAQIDSKILQTFHKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNI 60
          MEGDTFSGIGSTAQIDSKILQTFHKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRN+
Sbjct: 1  MEGDTFSGIGSTAQIDSKILQTFHKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV 60

[Close]
BLAST of Cp4.1LG04g11030 vs. ExPASy TrEMBL
Match: A0A6J1JGF0 (protein ELF4-LIKE 4-like OS=Cucurbita maxima OX=3661 GN=LOC111484884 PE=3 SV=1)

HSP 1 Score: 112 bits (280), Expect = 2.59e-30
Identity = 55/60 (91.67%), Postives = 59/60 (98.33%), Query Frame = 0 

Query: 1  MEGDTFSGIGSTAQIDSKILQTFHKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNI 60
          MEGDTFSG+GS+AQID+KILQTF KNFVQVQNILDQNKLLISEINQNHESKIPDNLNRN+
Sbjct: 1  MEGDTFSGLGSSAQIDTKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV 60

[Close]
BLAST of Cp4.1LG04g11030 vs. ExPASy TrEMBL
Match: A0A6J1H9N1 (protein ELF4-LIKE 4-like OS=Cucurbita moschata OX=3662 GN=LOC111461807 PE=3 SV=1)

HSP 1 Score: 112 bits (280), Expect = 2.59e-30
Identity = 55/60 (91.67%), Postives = 59/60 (98.33%), Query Frame = 0 

Query: 1  MEGDTFSGIGSTAQIDSKILQTFHKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNI 60
          MEGDTFSG+GS+AQID+KILQTF KNFVQVQNILDQNKLLISEINQNHESKIPDNLNRN+
Sbjct: 1  MEGDTFSGLGSSAQIDTKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV 60

[Close]
BLAST of Cp4.1LG04g11030 vs. ExPASy TrEMBL
Match: A0A1S3BQA6 (protein ELF4-LIKE 4 OS=Cucumis melo OX=3656 GN=LOC103492357 PE=3 SV=1)

HSP 1 Score: 111 bits (278), Expect = 5.22e-30
Identity = 55/60 (91.67%), Postives = 58/60 (96.67%), Query Frame = 0 

Query: 1  MEGDTFSGIGSTAQIDSKILQTFHKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNI 60
          MEGDTFSG+GS+ QIDSKILQTF KNFVQVQNILDQNKLLISEINQNHESKIPDNLNRN+
Sbjct: 1  MEGDTFSGLGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV 60

[Close]
BLAST of Cp4.1LG04g11030 vs. TAIR 10
Match: AT2G06255.1 (ELF4-like 3 )

HSP 1 Score: 89.7 bits (221), Expect = 1.1e-18
Identity = 46/61 (75.41%), Postives = 52/61 (85.25%), Query Frame = 0 

Query: 1  MEGDTFSG-IGSTAQIDSKILQTFHKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRN 60
          MEGDT S  +GS  Q+D KILQTF K+FVQVQNILD N+LLI+EINQNHESKIPDNL RN
Sbjct: 1  MEGDTISRMMGSGVQMDGKILQTFEKSFVQVQNILDHNRLLINEINQNHESKIPDNLGRN 60

[Close]
BLAST of Cp4.1LG04g11030 vs. TAIR 10
Match: AT1G17455.1 (ELF4-like 4 )

HSP 1 Score: 84.3 bits (207), Expect = 4.7e-17
Identity = 40/60 (66.67%), Postives = 48/60 (80.00%), Query Frame = 0 

Query: 1  MEGDTFSGIGSTAQIDSKILQTFHKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNI 60
          MEGD  SG G    +D K+LQ+F K+FV VQ+ILDQN+LLI+EINQNHESK PDNL RN+
Sbjct: 1  MEGDVLSGFGDRHNMDGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGRNV 60

[Close]
BLAST of Cp4.1LG04g11030 vs. TAIR 10
Match: AT1G17455.2 (ELF4-like 4 )

HSP 1 Score: 84.3 bits (207), Expect = 4.7e-17
Identity = 40/60 (66.67%), Postives = 48/60 (80.00%), Query Frame = 0 

Query: 1  MEGDTFSGIGSTAQIDSKILQTFHKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNI 60
          MEGD  SG G    +D K+LQ+F K+FV VQ+ILDQN+LLI+EINQNHESK PDNL RN+
Sbjct: 1  MEGDVLSGFGDRHNMDGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGRNV 60

[Close]
BLAST of Cp4.1LG04g11030 vs. TAIR 10
Match: AT1G72630.1 (ELF4-like 2 )

HSP 1 Score: 84.0 bits (206), Expect = 6.1e-17
Identity = 40/60 (66.67%), Postives = 49/60 (81.67%), Query Frame = 0 

Query: 1  MEGDTFSGIGSTAQIDSKILQTFHKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNI 60
          MEGD +SG G   Q+D K+LQ F K+FVQVQ+ILDQN+LLI+EINQNHESK  D+L RN+
Sbjct: 5  MEGDVYSGFGERYQMDGKLLQNFQKSFVQVQDILDQNRLLINEINQNHESKQADHLGRNV 64

[Close]
BLAST of Cp4.1LG04g11030 vs. TAIR 10
Match: AT2G40080.1 (Protein of unknown function (DUF1313) )

HSP 1 Score: 47.0 bits (110), Expect = 8.2e-06
Identity = 18/45 (40.00%), Postives = 34/45 (75.56%), Query Frame = 0 

Query: 16 DSKILQTFHKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNI 61
          D  + +   +NF QVQ++LD+N+ LI ++N NH+S++ DN+++N+
Sbjct: 22 DPAMWENLDRNFRQVQSVLDRNRSLIQQVNDNHQSRMADNMSKNV 66

The following BLAST results are available for this feature:
BLAST of Cp4.1LG04g11030 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8S8F51.6e-1775.41Protein ELF4-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=EFL3 PE=3 SV=1[more]
Q570U66.6e-1666.67Protein ELF4-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=EFL4 PE=2 SV=1[more]
Q94BS88.6e-1666.67Protein ELF4-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=EFL2 PE=2 SV=1[more]
O042111.2e-0440.00Protein EARLY FLOWERING 4 OS=Arabidopsis thaliana OX=3702 GN=ELF4 PE=1 SV=1[more]
O808771.5e-0440.68Protein ELF4-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=EFL1 PE=2 SV=1[more]
BLAST of Cp4.1LG04g11030 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022933909.11.38e-3298.33protein ELF4-LIKE 4-like [Cucurbita moschata] >XP_022933910.1 protein ELF4-LIKE ... [more]
KAG7021961.11.46e-3298.33Protein ELF4-LIKE 4 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022961237.15.35e-3091.67protein ELF4-LIKE 4-like [Cucurbita moschata] >XP_022961238.1 protein ELF4-LIKE ... [more]
XP_004144022.11.08e-2991.67protein ELF4-LIKE 4 [Cucumis sativus] >XP_008450908.1 PREDICTED: protein ELF4-LI... [more]
XP_022147541.11.02e-2788.33protein ELF4-LIKE 4 [Momordica charantia][more]
BLAST of Cp4.1LG04g11030 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1I0476.68e-3398.33protein ELF4-LIKE 4-like OS=Cucurbita maxima OX=3661 GN=LOC111467765 PE=3 SV=1[more]
A0A6J1F1266.68e-3398.33protein ELF4-LIKE 4-like OS=Cucurbita moschata OX=3662 GN=LOC111441179 PE=3 SV=1[more]
A0A6J1JGF02.59e-3091.67protein ELF4-LIKE 4-like OS=Cucurbita maxima OX=3661 GN=LOC111484884 PE=3 SV=1[more]
A0A6J1H9N12.59e-3091.67protein ELF4-LIKE 4-like OS=Cucurbita moschata OX=3662 GN=LOC111461807 PE=3 SV=1[more]
A0A1S3BQA65.22e-3091.67protein ELF4-LIKE 4 OS=Cucumis melo OX=3656 GN=LOC103492357 PE=3 SV=1[more]
BLAST of Cp4.1LG04g11030 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G06255.11.1e-1875.41ELF4-like 3 [more]
AT1G17455.14.7e-1766.67ELF4-like 4 [more]
AT1G17455.24.7e-1766.67ELF4-like 4 [more]
AT1G72630.16.1e-1766.67ELF4-like 2 [more]
AT2G40080.18.2e-0640.00Protein of unknown function (DUF1313) [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009741Protein EARLY FLOWERING 4 domainPFAMPF07011Elf4coord: 14..60
e-value: 1.5E-19
score: 69.6
NoneNo IPR availablePANTHERPTHR33469:SF16PROTEIN ELF4-LIKE 3coord: 1..60
IPR040462Protein EARLY FLOWERING 4PANTHERPTHR33469PROTEIN ELF4-LIKE 4coord: 1..60

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g11030.1Cp4.1LG04g11030.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009649 entrainment of circadian clock
biological_process GO:0042753 positive regulation of circadian rhythm
cellular_component GO:0005634 nucleus