Cp4.1LG04g10860 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG04g10860
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionTranslation machinery-associated protein 22
LocationCp4.1LG04: 9263959 .. 9269924 (+)
RNA-Seq ExpressionCp4.1LG04g10860
SyntenyCp4.1LG04g10860
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AATAACATTCCAACGCAACTCCTTCACTGTTCATTGCCTCTCGAATCTCATTCAGGCAACAAAGGGAAAGAGACCGAAAAACCCTGTCCGCACCGAAAGGGCGCTGAGAGGCTGTGCTTGAGGTGCTCCAATGGCGGATAAACCCCAACCGATACGCGTTTTGTACTGCCCAATCTGCAGTTTTCCGGCCGAGTATTGTGAATTCGGTCCCGATTTCGAAAAATGCAAGCCCTGGTTGATCCAGAATGCCCCCGATCTCTATCCCGATCTCCTCAAAGGTCATTTATATTCCCAAACCCTAAGAGTCTCTTATTTAGTTTCTCTCAATGTATTAATTGTTAGTTCAAATCCGAGTTTATCGACTAAATTTTCTTTCTTTCTCTGCCTGTAGAGGCCAATGGGAAGGAAGTTGGTGAAGTTTCTAATCAACTGCAGTCCACCTGTATCTCATCTACTGCTGGCGATGGAGCCGCTTCTTCAGGTTAGCTTGTCAAATATATTTATATATATGTGTGTGTTTATGCGTGAGTTTGTATCTATATGTGTATAGTTTTTTTGTTTTGTTGTATTTACATGCTAGGTTCACTTGAATATGTTGGAAGCTACTGCCCTCAACGTTAATGTTTTCCTTTTTATTTTGACTTTGTCGTGAAATTCTTACCAGGCTAATTCTACTTAGTTGTTTGAGAAACCCATTTTTAGCATTGCAATGTAGGGTAGTGGACCCTCGATTTACTCTCCAGTACTAGGTTGTAGGCGGGTTTTTTTTTTTGATATCGATGAGTGTCCGGGCTTGTGCATGCCCCTAAACTAATCTCACGAAAAAGTGATTGATCCTACTGCATTTAGTTGACATGGAAACACATAGGATATGAATTCCTAAGAAGGTGACCACCATGGTTTTGGCTGTACTTAATAAGCACTTTTGAGACCCTAGAACATTGAATAATCTTTTCCATTATTTCGACCTTACTCGAACATGGTATGTTCTATAGTTTGTACAACTCTGTCCTTGAATTCTAAAAAATAAATAATCTTTTCCATTATTTGGTTATGTGAGGAAAGATATAATAATATGATTACCTGCCTAGAGTTAGTGTTCCCGATATTGGAATTTTGCGGATAGTTGAAAATAGAACACTTAAGATCAGCAGGATTAATAAAGTAATCCCATTAAACATTTTTACCCTTTTGTCAGTTGGGTTGCGTTTGTATGGCTCTTCTCAATGTAACTTTTGATTTGATTGTCTTGTGTCTGACATCTTCTGCTTGTAATGTATTTTAACCAACATTTTCTTTTCCATTATTGTTTAATAATAATTTTATATTTGTTTGGTCTCAATGTACGACTTATAGCTCTAGTTACTCTTTTCTCTTTTGGTGGAGAACTGCAGCACCTAAGAAAGAGGAAGTGAAACGTCTTCCTGGTGGCAAGATAAAGAAAAAAGTAAGTTTTAAACTCAGTTCTGTTGTCACTCCACAGCAAGACGTGATGAATCTCCTCTGTTGGTTTTTTGCATGTAGGAGAAACAAGAAGTTGTAATTGAGAAGGTAACACGAAATAAGAGAAAGTGTATTACAACTGTTAAAGGGTTAGACCTTTTTGGTGAGCAATACTTTGTTTTCTTTCCCTATTTGCCATATCTTTATTGTTACAATAGTTTCCAATAACATTCTCTAACTGGATTTAGGAGTTAAACTTAGTGATGCTTCGAAGAAACTTGGGAAAAAGTTTGCTACGGGGGCCTCTGTGGTCAAGGTTATTAACTTCTGGTGCCATGATATAAGTATCTTTTTCTACTTTAGATGCCTCTTGATATCTTATCATCTGTTTAATGCTTGGTTTAGGGGCCAACTGAGAAAGATCAAATCGATGTTCAAGGGGACATATTCTATGACATTGTGGATTTCATTACTGAAACTTGGCCTGATGTAAGATTCTAATTCATCATTAATATTAGGGAGAAAAGCATATACGTGCCCCCCATTGCCTCTTAACTCATTCCAAAACCGTACTTGAATGTTGTTCTTTTACTCTTTACCTTATGTTTTTGAACTTGGTTTGATTATTTCTGATATGAATTGCACATAAATTATAGTGGATTCTGGACAGTTTTAAAAAATTGTGACATTTTCAACTTCTAATGCTAAGAAGAAGGTTGGTATTTTTTTTTGTTTTTTGTTGTTTTTTTTTTCCTTTCTGAAACTACTATATAAAAGGTCTATATTTAATTATATTTCTCGATTATATAGTGATTTAACACAAAGAGAAAAAAACAAACGAAAGAAACAACTTTATTGAAGATTTAGCTTTGTTGGTGCAACTGTATTTTGTATCCTGAGTTCTTAGCATTCACAGCCATTCGTTGATATTAAACTATTGTTGCATGCACAAGAGACACCCAGTTAAGGACTTCAATGTTGAATTGGCTCTATGTATATTAATGTAGCTCTAATGTTTGTATATAATGGTATTAATAACAAATATAAAGTCATGTGTTCTCCTACAAAATCAAAGCCCTATCTTCCCACCAATTTGATTCCCTTAATTCCCATCTACTAGCCACTTGGGTACAACTGAATAGCTACCACATCATACCCCCCCGTCTGCCTAACCATAAAACGAACTTGGAGATCTTGGGTTTGCTATTAGACATTGATGCTTGTCAGTTATTCCCCCAATTCTCTCCAATACAGAGCAGGGTCCGAAGTATCAAGTTGCTACGCTATAATTGAGTAGCCAGTGATGATTGTCAGTGAGTTCATCAAAAGTCTCAGATAGATTGTGTTTCCCATGTCTGGTGATTCGAACCAATAAGCACCACTTCCAATATTAGATTGCAGTTTCCTGGTTGTACATGTTGAAATTCCTTTGTAGATATGATCCTTTTGCAATATTACCACAATTCTTTTCTCAATTCCCTCCAATTTCTGATAAAGAAAAATCTCCGTCCAATTCACTAAGCTTTGGACCAAAGAAAATCTTGGCTCTCATTTTCATTGCGCGAGACAAAGGTAGTCCCATTAGGCTCATCCTCCACTGTGGCAATGTTACGCCTGTCCTATTCTCCCACCCTGTCTCTCTCTCTCTCTCTCTAAATCTTTGCTGGACCTTGGCATCAATTAAGCATTGAAGTTGGTGTCAGTTTGTGAATGGGTAATGGGTAGGCTCCTTCCTGATTCTTCTTGAAGAATTGGTTGAGTGGACTGGGACTGTAAATATTTGTAGATTGGTCCTTCAAAAATCTAGTTTGACCCTTTTTTACTTCATTGGAAAAATAATTGTTTGAGCTTTAGGCCTTAATCTTCAACCGTACTTAAGAGTATTTTAATAACCCTGCCATGTGTGTTGAGTTAATTATTCTTACCTCCCTGATATCTGGTTTGTAGTTATGTGCTACAATCTTTTTTAGGGTTATTGTTTTAGATGCATTACCAGCAGTTTCATTTTCTTAAATCTTAATGAAAACTTCTGTCTTTTAGAAAATAAAAATCTCAAAATTTTCGTTGATAGTCTCACAGATTCCTTTCTGGTGTCTGCAAATTCCCTGTACATTGGCCCTTATGGAGAGTTGAATTGTGATAGCAATGATACCGTGGGTTCTAGTTAACCTTGTAGTGATGACCATATGTTTGCCCATTCAAACCACATCGGACCCATAATCTTATGGCTTCCTTTAGCTTCTCAACCTCAACCATGCAGTTTGAGGCAGAGTTGATTGGCTTTGGATATCCAGCATTCAAAATTGTCCTTTTGAACGGAAGAATTCCAATCTTTCCTTTAGTGCACTGGGATTCAGGTATTCACAACTCGTTGCACAATTCCTTTGGTCCCTGCCGAGAAGTTAGGGGTAGGTGTTTTCCCACCTCACACTCTACCTCAATTTTAAATTGGAGACAAATTTCTCAATCACAACAATTTCTCAGGTTTGTCAATGATATTTACACTCTCGTTAGTAGCTGGTAGCTTCTGTTGGTCAGAATTGAACTTTCACTTCCATCGCTCCTGCCACCAAATTGACTTAAACAAGATTATTCCTCTTTTTTATGTTCTTTGACACACAGACATTATATTTAATTCTTTTGGGAAAGATGATACAGGAAATTCAGGAGGCCTGTTCTGTGTGCCAAGAATGCTGGCTTTCAACTACCCACGTCCGTCTCTCCTTCACTTTCTTCTCCCATTCCTTCTCTCTGGCTAATTCCGAATGTCCCATCCATAAAACTAACTAGAGTTATTATTGGACCTTTAGCCTTACGCATCACATTTCTACAATCACATTCAAGGCCATCTTACCAAAACTCTTTTCTTGATGGGTTACTCATTTTGGGCCCCTCTATACTAATATAGCATTAGTATACCATATTGGTGGCCTGGAAGGCCTATCCATTTTGTTCCAAGTAATTGTTGGATTTGGGTTCCTCCTTTTTCCCTTTTCAATTGGGTAGTGCTGTGTAGACCTTCTTGTAGTGCTAAAATTCAACACAGGGTGAGTCAAAGGATTATTTGATTGTACATACACTTATGCTTGGGTCTAGTGTGGTAGATTAAATAGATGGTACTTTAATTTTTGTCTTTTAACCATAAAGTAGGTTTTAACTTGGTTATTTGCCTCCCCCCCCCCCCGNATGGTCTTTTTCATCTACATGGGGCCTGGAATTGTCATGATGGAGGGAAGTTGCAAACAAATAATCGTTCAGAAGAAATTATAATATATCAACTAGGTCATAGATTAACTAGCCATTTCATTAGTGATACATATAGCTCCTCTGTAGATGTCTTCTTTTTTAACACCACCTTCAACTTGAACTTCACTTTTTGAACCTAGTATTTTACCCATTTTGCAGTCATTTACCAAGCAATAAGTAACAGTGAAATTAAAAGCAACTGTGTTTTTTTTTTGTTCTAATGTAAAAAATGGTGCCCTTTATATTTGCTTTCATATGTTTGATACTTGATGAGACTTCTTTTTGAAAAAGTTTTGTCAACGTTGCTTTTAGTATTTTATTGCTTACCTTATCTCCTTGCTAACTGTACTATCTGTTGTTCCTCTTTCATTTTTCCGTCCTCCTTCATCATCATTTTTTACCAGTCATAATTACGAGGACATAAGATATATTTGGAAATTTTTAGGGTGGAATCCAGTGGGATAGTGAGCTTGTTTAAATATTATAAATGCCTCTTAATCCGTTGTTGTAACAGGTTCCTGAAACTGCAATTTTCTTCCTCGAAGATGGGAAAAAGGTTCCTGCTGCTTGACAAGGAAATCATGGCAAACAAAAGTTGGGACTTTTGACATCCTTTTCCCTACTTGTGCGAGTCCTACTAAGATTCGACAAGTGGCCATTACAGTTCTTTTTTTTTGTTAAAGTTCCAAAAAGCTATGTATTGGATCATGAACTTTTTGTCCCACTTTCTTCAATCGTTGTAGCGTTTCCTCAGGAGATAAGCTTATTGATTTTGTCCTTTTTATTTATTTAAAAAGAAGAAGAAGAAGAAAAAAAAATCTTGGTCAATGTCTGTTCTAACTCATGAGTTCTCTGTATAGAGGTCTATCCTAATCTTGTATTCTTTTTCATACACTTCACAGAAATAACTCAAGACACGTGTCTCTCCATATTTCCTCCCCACTTATTCGAAGTGCAAACTGATATCGTCTCTTTTGCAGTTGGGAACTTGTCAAAGCGTTGTTTTCAGGAACAGTAAAACTTGACAGCTTGTATCATTATACTCTGCTTTATGGGTAAAGGGGAGTGTAACACTAGAAATTCAACAAAACAAATTATGGTCGAACTTGATTCGTTAATTGTGGCATATATTTTGTGCATAAGAACCTAATATGTTGATGTTCAATGGTTGCTTTGCTTAGCCTTTTAGCATATGGAGGAGCACTAAGGAGATGATGCTGGTGAAGAAACTTTTGAAGTCCCATCTGATTATGACACATTGCGTGGTCAAAAACCAA

mRNA sequence

AATAACATTCCAACGCAACTCCTTCACTGTTCATTGCCTCTCGAATCTCATTCAGGCAACAAAGGGAAAGAGACCGAAAAACCCTGTCCGCACCGAAAGGGCGCTGAGAGGCTGTGCTTGAGGTGCTCCAATGGCGGATAAACCCCAACCGATACGCGTTTTGTACTGCCCAATCTGCAGTTTTCCGGCCGAGTATTGTGAATTCGGTCCCGATTTCGAAAAATGCAAGCCCTGGTTGATCCAGAATGCCCCCGATCTCTATCCCGATCTCCTCAAAGAGGCCAATGGGAAGGAAGTTGGTGAAGTTTCTAATCAACTGCAGTCCACCTGTATCTCATCTACTGCTGGCGATGGAGCCGCTTCTTCAGCACCTAAGAAAGAGGAAGTGAAACGTCTTCCTGGTGGCAAGATAAAGAAAAAAGAGAAACAAGAAGTTGTAATTGAGAAGGTAACACGAAATAAGAGAAAGTGTATTACAACTGTTAAAGGGTTAGACCTTTTTGGAGTTAAACTTAGTGATGCTTCGAAGAAACTTGGGAAAAAGTTTGCTACGGGGGCCTCTGTGGTCAAGGGGCCAACTGAGAAAGATCAAATCGATGTTCAAGGGGACATATTCTATGACATTGTGGATTTCATTACTGAAACTTGGCCTGATGTATTCACAACTCGTTGCACAATTCCTTTGGTCCCTGCCGAGAAGTTAGGGGTTCCTGAAACTGCAATTTTCTTCCTCGAAGATGGGAAAAAGCCTTTTAGCATATGGAGGAGCACTAAGGAGATGATGCTGGTGAAGAAACTTTTGAAGTCCCATCTGATTATGACACATTGCGTGGTCAAAAACCAA

Coding sequence (CDS)

ATGGCGGATAAACCCCAACCGATACGCGTTTTGTACTGCCCAATCTGCAGTTTTCCGGCCGAGTATTGTGAATTCGGTCCCGATTTCGAAAAATGCAAGCCCTGGTTGATCCAGAATGCCCCCGATCTCTATCCCGATCTCCTCAAAGAGGCCAATGGGAAGGAAGTTGGTGAAGTTTCTAATCAACTGCAGTCCACCTGTATCTCATCTACTGCTGGCGATGGAGCCGCTTCTTCAGCACCTAAGAAAGAGGAAGTGAAACGTCTTCCTGGTGGCAAGATAAAGAAAAAAGAGAAACAAGAAGTTGTAATTGAGAAGGTAACACGAAATAAGAGAAAGTGTATTACAACTGTTAAAGGGTTAGACCTTTTTGGAGTTAAACTTAGTGATGCTTCGAAGAAACTTGGGAAAAAGTTTGCTACGGGGGCCTCTGTGGTCAAGGGGCCAACTGAGAAAGATCAAATCGATGTTCAAGGGGACATATTCTATGACATTGTGGATTTCATTACTGAAACTTGGCCTGATGTATTCACAACTCGTTGCACAATTCCTTTGGTCCCTGCCGAGAAGTTAGGGGTTCCTGAAACTGCAATTTTCTTCCTCGAAGATGGGAAAAAGCCTTTTAGCATATGGAGGAGCACTAAGGAGATGATGCTGGTGAAGAAACTTTTGAAGTCCCATCTGATTATGACACATTGCGTGGTCAAAAACCAA

Protein sequence

MADKPQPIRVLYCPICSFPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANGKEVGEVSNQLQSTCISSTAGDGAASSAPKKEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCITTVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKDQIDVQGDIFYDIVDFITETWPDVFTTRCTIPLVPAEKLGVPETAIFFLEDGKKPFSIWRSTKEMMLVKKLLKSHLIMTHCVVKNQ
Homology
[Close]
BLAST of Cp4.1LG04g10860 vs. ExPASy Swiss-Prot
Match: O42929 (Translation machinery-associated protein 22 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=tma22 PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 5.9e-28
Identity = 75/174 (43.10%), Postives = 103/174 (59.20%), Query Frame = 0 

Query: 5   PQPIRVLYCPICSFPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANGKEVGEVSNQLQ 64
           P+   VLYC +C+ P EYCEF    +KCK WL  + PD+Y  L  E       ++S  L+
Sbjct: 7   PKLKSVLYCDVCTLPVEYCEFEGTLKKCKEWLKSSHPDVYDKLYGEQ------DLSKDLE 66

Query: 65  STCISSTAGDGAASSAPKK--EEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCITTVKGLD 124
           +T   S   D  A   P K  +E KR+   + K+    +V+I+ + R KRK +TTV+GLD
Sbjct: 67  NTLNVSGTKDSNAEEQPAKLTKEEKRVEREEAKRM-ASKVLIKTIERTKRKRVTTVQGLD 126

Query: 125 LFGVKLSDASKKLGKKFATGASVVKGPTEKDQIDVQGDIFYDIVDFITETWPDV 177
            FG++   A+K L  KFATGASV K   +KD+I VQGD+ YDI DFI E + +V
Sbjct: 127 AFGIETKKAAKMLANKFATGASVTKTADKKDEIVVQGDLNYDIFDFILEKFKEV 173

[Close]
BLAST of Cp4.1LG04g10860 vs. ExPASy Swiss-Prot
Match: Q5ZJ39 (Density-regulated protein OS=Gallus gallus OX=9031 GN=DENR PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 5.0e-27
Identity = 72/178 (40.45%), Postives = 101/178 (56.74%), Query Frame = 0 

Query: 2   ADKPQPIRVLYCPICSFPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANGKEVGEVSN 61
           +D   P+RVLYC +CS P EYCE+ PD  KC+ WL +N PD +  L  E + K+   V  
Sbjct: 23  SDADYPLRVLYCGVCSLPTEYCEYMPDVTKCRQWLEKNFPDEFAKLTVENSPKQEAGVGE 82

Query: 62  QLQSTCISSTAGDGAASSAPKKEEVKRLPGGKIKKKEK---QEVVIEKVTRNKRKCITTV 121
                      G G A    +K++ KR   G+IK+K+K   Q+V I K+ R K+K +T V
Sbjct: 83  -----------GQGTAGEEEEKKKQKRGGRGQIKQKKKTVPQKVTIAKIPRAKKKYVTRV 142

Query: 122 KGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKDQIDVQGDIFYDIVDFITETWPDV 177
            GL  F + L +A +   +KF+ GASV    T +D+I +QGD   DI+D I E WP+V
Sbjct: 143 CGLATFEIDLKEAQRFFAQKFSCGASV----TGEDEIIIQGDFTDDIIDVIQEKWPEV 185

[Close]
BLAST of Cp4.1LG04g10860 vs. ExPASy Swiss-Prot
Match: Q2HJ47 (Density-regulated protein OS=Bos taurus OX=9913 GN=DENR PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.5e-26
Identity = 71/177 (40.11%), Postives = 101/177 (57.06%), Query Frame = 0 

Query: 3   DKPQPIRVLYCPICSFPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANGKEVGEVSNQ 62
           D   P+RVLYC +CS P EYCE+ PD  KC+ WL +N P+ +  L  E + K+   +S  
Sbjct: 24  DADYPLRVLYCGVCSLPTEYCEYMPDVAKCRQWLEKNFPNEFAKLTVENSPKQEAGISE- 83

Query: 63  LQSTCISSTAGDGAASSAPKKEEVKRLPGGKIKKKEK---QEVVIEKVTRNKRKCITTVK 122
                     G G A    +K++ KR   G+IK+K+K   Q+V I K+ R K+K +T V 
Sbjct: 84  ----------GQGTAGEEEEKKKQKRGGRGQIKQKKKTVPQKVTIAKIPRAKKKYVTRVC 143

Query: 123 GLDLFGVKLSDASKKLGKKFATGASVVKGPTEKDQIDVQGDIFYDIVDFITETWPDV 177
           GL  F + L +A +   +KF+ GASV    T +D+I +QGD   DI+D I E WP+V
Sbjct: 144 GLATFEIDLKEAQRFFAQKFSCGASV----TGEDEIIIQGDFTDDIIDVIQEKWPEV 185

[Close]
BLAST of Cp4.1LG04g10860 vs. ExPASy Swiss-Prot
Match: O43583 (Density-regulated protein OS=Homo sapiens OX=9606 GN=DENR PE=1 SV=2)

HSP 1 Score: 121.3 bits (303), Expect = 1.5e-26
Identity = 71/177 (40.11%), Postives = 101/177 (57.06%), Query Frame = 0 

Query: 3   DKPQPIRVLYCPICSFPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANGKEVGEVSNQ 62
           D   P+RVLYC +CS P EYCE+ PD  KC+ WL +N P+ +  L  E + K+   +S  
Sbjct: 24  DADYPLRVLYCGVCSLPTEYCEYMPDVAKCRQWLEKNFPNEFAKLTVENSPKQEAGISE- 83

Query: 63  LQSTCISSTAGDGAASSAPKKEEVKRLPGGKIKKKEK---QEVVIEKVTRNKRKCITTVK 122
                     G G A    +K++ KR   G+IK+K+K   Q+V I K+ R K+K +T V 
Sbjct: 84  ----------GQGTAGEEEEKKKQKRGGRGQIKQKKKTVPQKVTIAKIPRAKKKYVTRVC 143

Query: 123 GLDLFGVKLSDASKKLGKKFATGASVVKGPTEKDQIDVQGDIFYDIVDFITETWPDV 177
           GL  F + L +A +   +KF+ GASV    T +D+I +QGD   DI+D I E WP+V
Sbjct: 144 GLATFEIDLKEAQRFFAQKFSCGASV----TGEDEIIIQGDFTDDIIDVIQEKWPEV 185

[Close]
BLAST of Cp4.1LG04g10860 vs. ExPASy Swiss-Prot
Match: Q5RFP5 (Density-regulated protein OS=Pongo abelii OX=9601 GN=DENR PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.5e-26
Identity = 71/177 (40.11%), Postives = 101/177 (57.06%), Query Frame = 0 

Query: 3   DKPQPIRVLYCPICSFPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANGKEVGEVSNQ 62
           D   P+RVLYC +CS P EYCE+ PD  KC+ WL +N P+ +  L  E + K+   +S  
Sbjct: 24  DADYPLRVLYCGVCSLPTEYCEYMPDVAKCRQWLEKNFPNEFAKLTVENSPKQEAGISE- 83

Query: 63  LQSTCISSTAGDGAASSAPKKEEVKRLPGGKIKKKEK---QEVVIEKVTRNKRKCITTVK 122
                     G G A    +K++ KR   G+IK+K+K   Q+V I K+ R K+K +T V 
Sbjct: 84  ----------GQGTAGEEEEKKKQKRGGRGQIKQKKKTVPQKVTIAKIPRAKKKYVTRVC 143

Query: 123 GLDLFGVKLSDASKKLGKKFATGASVVKGPTEKDQIDVQGDIFYDIVDFITETWPDV 177
           GL  F + L +A +   +KF+ GASV    T +D+I +QGD   DI+D I E WP+V
Sbjct: 144 GLATFEIDLKEAQRFFAQKFSCGASV----TGEDEIIIQGDFTDDIIDVIQEKWPEV 185

[Close]
BLAST of Cp4.1LG04g10860 vs. NCBI nr
Match: KAG6588046.1 (Cytokinin dehydrogenase 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 428 bits (1100), Expect = 1.83e-143
Identity = 218/238 (91.60%), Postives = 219/238 (92.02%), Query Frame = 0 

Query: 1   MADKPQPIRVLYCPICSFPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANGKEVGEVS 60
           MADKPQPIRVLYCPICS PAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANGKEVGEVS
Sbjct: 1   MADKPQPIRVLYCPICSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANGKEVGEVS 60

Query: 61  NQLQSTCISSTAGDGAASSAPKKEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCITTVKG 120
           NQLQSTCISS AGDGAASSAPKKEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCITTVKG
Sbjct: 61  NQLQSTCISSAAGDGAASSAPKKEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCITTVKG 120

Query: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKDQIDVQGDIFYDIVDFITETWPDVFTTR 180
           LDLFGVKLSDASKKLGKKFATGASVVKGPTEKDQIDVQGDIFYDIVDFITETWPDV    
Sbjct: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKDQIDVQGDIFYDIVDFITETWPDV---- 180

Query: 181 CTIPLVPAEKLGVPETAIFFLEDGKKPFSIWRSTKEMMLVKKLLKSHLIMTHCVVKNQ 238
                        PETAIFF+EDGKKPFSIWRSTKEMMLVKKLLKSHLIMTHCVVKNQ
Sbjct: 181 -------------PETAIFFIEDGKKPFSIWRSTKEMMLVKKLLKSHLIMTHCVVKNQ 221

[Close]
BLAST of Cp4.1LG04g10860 vs. NCBI nr
Match: XP_023531789.1 (translation machinery-associated protein 22-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 370 bits (951), Expect = 2.54e-128
Identity = 189/206 (91.75%), Postives = 189/206 (91.75%), Query Frame = 0 

Query: 1   MADKPQPIRVLYCPICSFPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANGKEVGEVS 60
           MADKPQPIRVLYCPICSFPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANGKEVGEVS
Sbjct: 1   MADKPQPIRVLYCPICSFPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANGKEVGEVS 60

Query: 61  NQLQSTCISSTAGDGAASSAPKKEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCITTVKG 120
           NQLQSTCISSTAGDGAASSAPKKEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCITTVKG
Sbjct: 61  NQLQSTCISSTAGDGAASSAPKKEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCITTVKG 120

Query: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKDQIDVQGDIFYDIVDFITETWPDVFTTR 180
           LDLFGVKLSDASKKLGKKFATGASVVKGPTEKDQIDVQGDIFYDIVDFITETWPDV    
Sbjct: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKDQIDVQGDIFYDIVDFITETWPDV---- 180

Query: 181 CTIPLVPAEKLGVPETAIFFLEDGKK 206
                        PETAIFFLEDGKK
Sbjct: 181 -------------PETAIFFLEDGKK 189

[Close]
BLAST of Cp4.1LG04g10860 vs. NCBI nr
Match: XP_022933735.1 (translation machinery-associated protein 22-like [Cucurbita moschata] >KAG7021939.1 tma22 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 365 bits (938), Expect = 2.43e-126
Identity = 186/206 (90.29%), Postives = 187/206 (90.78%), Query Frame = 0 

Query: 1   MADKPQPIRVLYCPICSFPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANGKEVGEVS 60
           MADKPQPIRVLYCPICS PAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANGKEVGEVS
Sbjct: 1   MADKPQPIRVLYCPICSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANGKEVGEVS 60

Query: 61  NQLQSTCISSTAGDGAASSAPKKEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCITTVKG 120
           NQLQSTCISS AGDGAASSAPKKEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCITTVKG
Sbjct: 61  NQLQSTCISSAAGDGAASSAPKKEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCITTVKG 120

Query: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKDQIDVQGDIFYDIVDFITETWPDVFTTR 180
           LDLFGVKLSDASKKLGKKFATGASVVKGPTEKDQIDVQGDIFYDIVDFITETWPDV    
Sbjct: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKDQIDVQGDIFYDIVDFITETWPDV---- 180

Query: 181 CTIPLVPAEKLGVPETAIFFLEDGKK 206
                        PETAIFF+EDGKK
Sbjct: 181 -------------PETAIFFIEDGKK 189

[Close]
BLAST of Cp4.1LG04g10860 vs. NCBI nr
Match: XP_022968349.1 (translation machinery-associated protein 22-like [Cucurbita maxima])

HSP 1 Score: 363 bits (932), Expect = 1.99e-125
Identity = 185/206 (89.81%), Postives = 186/206 (90.29%), Query Frame = 0 

Query: 1   MADKPQPIRVLYCPICSFPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANGKEVGEVS 60
           MADKPQPIRVLYCPICS PAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANGKEVGEVS
Sbjct: 1   MADKPQPIRVLYCPICSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANGKEVGEVS 60

Query: 61  NQLQSTCISSTAGDGAASSAPKKEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCITTVKG 120
           NQLQSTCISS AGDGAASSAPKKEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCIT VKG
Sbjct: 61  NQLQSTCISSAAGDGAASSAPKKEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCITIVKG 120

Query: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKDQIDVQGDIFYDIVDFITETWPDVFTTR 180
           LDLFGVKLSDASKKLGKKFATGASVVKGPTEKDQIDVQGDIFYDIVDFITETWPDV    
Sbjct: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKDQIDVQGDIFYDIVDFITETWPDV---- 180

Query: 181 CTIPLVPAEKLGVPETAIFFLEDGKK 206
                        PETAIFF+EDGKK
Sbjct: 181 -------------PETAIFFIEDGKK 189

[Close]
BLAST of Cp4.1LG04g10860 vs. NCBI nr
Match: XP_004144004.1 (translation machinery-associated protein 22 [Cucumis sativus] >KAE8653433.1 hypothetical protein Csa_007666 [Cucumis sativus])

HSP 1 Score: 346 bits (888), Expect = 1.01e-118
Identity = 174/206 (84.47%), Postives = 182/206 (88.35%), Query Frame = 0 

Query: 1   MADKPQPIRVLYCPICSFPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANGKEVGEVS 60
           MA+KPQP+RVLYCP+CS PAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEAN KE GEVS
Sbjct: 1   MAEKPQPVRVLYCPVCSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANAKEAGEVS 60

Query: 61  NQLQSTCISSTAGDGAASSAPKKEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCITTVKG 120
           NQLQST ISS AGDGAASS PK+EEVKRLPGGKIKKK+KQEV+IEKVTRNKRKCITTVKG
Sbjct: 61  NQLQSTSISSAAGDGAASSGPKQEEVKRLPGGKIKKKDKQEVIIEKVTRNKRKCITTVKG 120

Query: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKDQIDVQGDIFYDIVDFITETWPDVFTTR 180
           LDLFGVKLSDASKKLGKKFATGASVVKGPTEK+QIDVQGDI YDIVDFITETWPDV    
Sbjct: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVDFITETWPDV---- 180

Query: 181 CTIPLVPAEKLGVPETAIFFLEDGKK 206
                        PETAIFF+EDGKK
Sbjct: 181 -------------PETAIFFIEDGKK 189

[Close]
BLAST of Cp4.1LG04g10860 vs. ExPASy TrEMBL
Match: A0A6J1F5N5 (Translation machinery-associated protein 22 OS=Cucurbita moschata OX=3662 GN=LOC111441062 PE=3 SV=1)

HSP 1 Score: 365 bits (938), Expect = 1.18e-126
Identity = 186/206 (90.29%), Postives = 187/206 (90.78%), Query Frame = 0 

Query: 1   MADKPQPIRVLYCPICSFPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANGKEVGEVS 60
           MADKPQPIRVLYCPICS PAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANGKEVGEVS
Sbjct: 1   MADKPQPIRVLYCPICSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANGKEVGEVS 60

Query: 61  NQLQSTCISSTAGDGAASSAPKKEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCITTVKG 120
           NQLQSTCISS AGDGAASSAPKKEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCITTVKG
Sbjct: 61  NQLQSTCISSAAGDGAASSAPKKEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCITTVKG 120

Query: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKDQIDVQGDIFYDIVDFITETWPDVFTTR 180
           LDLFGVKLSDASKKLGKKFATGASVVKGPTEKDQIDVQGDIFYDIVDFITETWPDV    
Sbjct: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKDQIDVQGDIFYDIVDFITETWPDV---- 180

Query: 181 CTIPLVPAEKLGVPETAIFFLEDGKK 206
                        PETAIFF+EDGKK
Sbjct: 181 -------------PETAIFFIEDGKK 189

[Close]
BLAST of Cp4.1LG04g10860 vs. ExPASy TrEMBL
Match: A0A6J1HZE2 (Translation machinery-associated protein 22 OS=Cucurbita maxima OX=3661 GN=LOC111467611 PE=3 SV=1)

HSP 1 Score: 363 bits (932), Expect = 9.66e-126
Identity = 185/206 (89.81%), Postives = 186/206 (90.29%), Query Frame = 0 

Query: 1   MADKPQPIRVLYCPICSFPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANGKEVGEVS 60
           MADKPQPIRVLYCPICS PAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANGKEVGEVS
Sbjct: 1   MADKPQPIRVLYCPICSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANGKEVGEVS 60

Query: 61  NQLQSTCISSTAGDGAASSAPKKEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCITTVKG 120
           NQLQSTCISS AGDGAASSAPKKEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCIT VKG
Sbjct: 61  NQLQSTCISSAAGDGAASSAPKKEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCITIVKG 120

Query: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKDQIDVQGDIFYDIVDFITETWPDVFTTR 180
           LDLFGVKLSDASKKLGKKFATGASVVKGPTEKDQIDVQGDIFYDIVDFITETWPDV    
Sbjct: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKDQIDVQGDIFYDIVDFITETWPDV---- 180

Query: 181 CTIPLVPAEKLGVPETAIFFLEDGKK 206
                        PETAIFF+EDGKK
Sbjct: 181 -------------PETAIFFIEDGKK 189

[Close]
BLAST of Cp4.1LG04g10860 vs. ExPASy TrEMBL
Match: A0A6J1JK26 (Translation machinery-associated protein 22 OS=Cucurbita maxima OX=3661 GN=LOC111485287 PE=3 SV=1)

HSP 1 Score: 345 bits (884), Expect = 1.98e-118
Identity = 175/206 (84.95%), Postives = 181/206 (87.86%), Query Frame = 0 

Query: 1   MADKPQPIRVLYCPICSFPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANGKEVGEVS 60
           MADKPQP+RVLYCPICS PAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEAN KE GEVS
Sbjct: 1   MADKPQPVRVLYCPICSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANAKEAGEVS 60

Query: 61  NQLQSTCISSTAGDGAASSAPKKEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCITTVKG 120
           NQLQST ISS AGDGA SSAPK+EEVKRLPGGKIKKKE+QEV+IEKVTRNKRKCITTVKG
Sbjct: 61  NQLQSTSISSAAGDGATSSAPKQEEVKRLPGGKIKKKERQEVIIEKVTRNKRKCITTVKG 120

Query: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKDQIDVQGDIFYDIVDFITETWPDVFTTR 180
           LDLFGVKLSDASKKLGKKFATGASVVKGPTEK+QIDVQGDI YDIVDFITETW DV    
Sbjct: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVDFITETWRDV---- 180

Query: 181 CTIPLVPAEKLGVPETAIFFLEDGKK 206
                        PETAIFF+EDGKK
Sbjct: 181 -------------PETAIFFIEDGKK 189

[Close]
BLAST of Cp4.1LG04g10860 vs. ExPASy TrEMBL
Match: A0A6J1H953 (Translation machinery-associated protein 22 OS=Cucurbita moschata OX=3662 GN=LOC111461628 PE=3 SV=1)

HSP 1 Score: 344 bits (883), Expect = 2.82e-118
Identity = 174/206 (84.47%), Postives = 181/206 (87.86%), Query Frame = 0 

Query: 1   MADKPQPIRVLYCPICSFPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANGKEVGEVS 60
           MADKPQP+RVLYCP+CS PAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEAN KE GEVS
Sbjct: 1   MADKPQPVRVLYCPVCSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANAKEAGEVS 60

Query: 61  NQLQSTCISSTAGDGAASSAPKKEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCITTVKG 120
           NQLQST ISS AGDGA SSAPK+EEVKRLPGGKIKKKE+QEV+IEKVTRNKRKCITTVKG
Sbjct: 61  NQLQSTSISSAAGDGATSSAPKQEEVKRLPGGKIKKKERQEVIIEKVTRNKRKCITTVKG 120

Query: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKDQIDVQGDIFYDIVDFITETWPDVFTTR 180
           LDLFGVKLSDASKKLGKKFATGASVVKGPTEK+QIDVQGDI YDIVDFITETW DV    
Sbjct: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVDFITETWRDV---- 180

Query: 181 CTIPLVPAEKLGVPETAIFFLEDGKK 206
                        PETAIFF+EDGKK
Sbjct: 181 -------------PETAIFFIEDGKK 189

[Close]
BLAST of Cp4.1LG04g10860 vs. ExPASy TrEMBL
Match: A0A6J1D0S6 (Translation machinery-associated protein 22 OS=Momordica charantia OX=3673 GN=LOC111016533 PE=3 SV=1)

HSP 1 Score: 340 bits (873), Expect = 9.40e-117
Identity = 172/206 (83.50%), Postives = 180/206 (87.38%), Query Frame = 0 

Query: 1   MADKPQPIRVLYCPICSFPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANGKEVGEVS 60
           MA+KPQP+ VLYCP+CS PAEYCEFGPDFEKCKPWLI+NAPDLYPDLLKEAN KE  E S
Sbjct: 1   MAEKPQPVLVLYCPVCSLPAEYCEFGPDFEKCKPWLIRNAPDLYPDLLKEANAKEAAEAS 60

Query: 61  NQLQSTCISSTAGDGAASSAPKKEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCITTVKG 120
           NQLQST ISS AGDGAASSAPK+EEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCITTVKG
Sbjct: 61  NQLQSTSISSAAGDGAASSAPKQEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCITTVKG 120

Query: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKDQIDVQGDIFYDIVDFITETWPDVFTTR 180
           LDLFGVKLSDASKKLGKKFATGASVVKGPTEK+QIDVQGDI YDIVDF+TETWPDV    
Sbjct: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVDFLTETWPDV---- 180

Query: 181 CTIPLVPAEKLGVPETAIFFLEDGKK 206
                        PETAIFF+EDGKK
Sbjct: 181 -------------PETAIFFIEDGKK 189

[Close]
BLAST of Cp4.1LG04g10860 vs. TAIR 10
Match: AT5G11900.1 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 292.7 bits (748), Expect = 2.6e-79
Identity = 148/211 (70.14%), Postives = 169/211 (80.09%), Query Frame = 0 

Query: 1   MADKPQPIRVLYCPICSFPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANGKEVGEVS 60
           MA+K +P++VLYC +CS PAEYCEFGPDF +CKPWL++NAPDLYPDLLKEAN K    VS
Sbjct: 1   MAEKLEPVKVLYCGVCSLPAEYCEFGPDFARCKPWLVENAPDLYPDLLKEANEKAADNVS 60

Query: 61  NQLQSTCISSTAGDGAASSA-----PKKEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCI 120
           ++LQS  ISS   DGA SSA      KKEEVKRLPGGK+KKK++QEV+IEKV RNKRKCI
Sbjct: 61  DKLQSVGISSGGADGAPSSAQTGGTSKKEEVKRLPGGKVKKKDRQEVIIEKVVRNKRKCI 120

Query: 121 TTVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKDQIDVQGDIFYDIVDFITETWPD 180
           T VKGL+LFG+KLSDASKKLGKKFATGASVVKGPTEK+QIDVQGDI YDIV+FIT+TWPD
Sbjct: 121 TIVKGLELFGIKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIIYDIVEFITDTWPD 180

Query: 181 VFTTRCTIPLVPAEKLGVPETAIFFLEDGKK 207
                            VPE +IFF+EDGKK
Sbjct: 181 -----------------VPERSIFFIEDGKK 194

The following BLAST results are available for this feature:
BLAST of Cp4.1LG04g10860 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O429295.9e-2843.10Translation machinery-associated protein 22 OS=Schizosaccharomyces pombe (strain... [more]
Q5ZJ395.0e-2740.45Density-regulated protein OS=Gallus gallus OX=9031 GN=DENR PE=2 SV=1[more]
Q2HJ471.5e-2640.11Density-regulated protein OS=Bos taurus OX=9913 GN=DENR PE=2 SV=1[more]
O435831.5e-2640.11Density-regulated protein OS=Homo sapiens OX=9606 GN=DENR PE=1 SV=2[more]
Q5RFP51.5e-2640.11Density-regulated protein OS=Pongo abelii OX=9601 GN=DENR PE=2 SV=1[more]
BLAST of Cp4.1LG04g10860 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6588046.11.83e-14391.60Cytokinin dehydrogenase 4, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_023531789.12.54e-12891.75translation machinery-associated protein 22-like [Cucurbita pepo subsp. pepo][more]
XP_022933735.12.43e-12690.29translation machinery-associated protein 22-like [Cucurbita moschata] >KAG702193... [more]
XP_022968349.11.99e-12589.81translation machinery-associated protein 22-like [Cucurbita maxima][more]
XP_004144004.11.01e-11884.47translation machinery-associated protein 22 [Cucumis sativus] >KAE8653433.1 hypo... [more]
BLAST of Cp4.1LG04g10860 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1F5N51.18e-12690.29Translation machinery-associated protein 22 OS=Cucurbita moschata OX=3662 GN=LOC... [more]
A0A6J1HZE29.66e-12689.81Translation machinery-associated protein 22 OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
A0A6J1JK261.98e-11884.95Translation machinery-associated protein 22 OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
A0A6J1H9532.82e-11884.47Translation machinery-associated protein 22 OS=Cucurbita moschata OX=3662 GN=LOC... [more]
A0A6J1D0S69.40e-11783.50Translation machinery-associated protein 22 OS=Momordica charantia OX=3673 GN=LO... [more]
BLAST of Cp4.1LG04g10860 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G11900.12.6e-7970.14Translation initiation factor SUI1 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001950SUI1 domainPFAMPF01253SUI1coord: 99..171
e-value: 4.2E-19
score: 68.8
IPR001950SUI1 domainPROSITEPS50296SUI1coord: 102..173
score: 19.179047
NoneNo IPR availableGENE3D3.30.780.10coord: 59..176
e-value: 1.9E-18
score: 68.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..90
NoneNo IPR availablePANTHERPTHR12789DENSITY-REGULATED PROTEIN HOMOLOGcoord: 1..179
NoneNo IPR availablePANTHERPTHR12789:SF3TRANSLATION MACHINERY-ASSOCIATED PROTEIN 22coord: 1..179
NoneNo IPR availableCDDcd11607DENR_Ccoord: 100..176
e-value: 7.78312E-40
score: 130.37
IPR005873DENR family, eukaryotesTIGRFAMTIGR01159TIGR01159coord: 7..177
e-value: 1.7E-51
score: 172.5
IPR036877SUI1 domain superfamilySUPERFAMILY55159eIF1-likecoord: 19..174

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g10860.1Cp4.1LG04g10860.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0001731 formation of translation preinitiation complex
biological_process GO:0002188 translation reinitiation
biological_process GO:0006413 translational initiation
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005840 ribosome
molecular_function GO:0003729 mRNA binding
molecular_function GO:0003743 translation initiation factor activity