Cp4.1LG04g10600 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG04g10600
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST5
Location	Cp4.1LG04: 9298938 .. 9302031 (-)
RNA-Seq Expression	Cp4.1LG04g10600
Synteny	Cp4.1LG04g10600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTGTAGTCAAAATTAGCCTTTTCATTTCAGCAAAATAACCCTAAAGTACTCCGTTCCCCAAATCTCTCTTCCTTCAGTCGTCAATTCCAGTTGACTAGAGAGAACTCCAGATCTCTTTGGAATCAGTTCTTCGCCCCCCACCGGATTTGATGGTGAGTGAAATTGAAGTCGATGGTATTCTGGTCGAATTGCTTTGGCAACAATTCCTTTTGATTTCGATGTCTTTAACGTTTCGCGTTTTGTAATTCTATGGATCATCATTTTGCAGGCTCCGAAACCTGTTACGAGTCCCGTCCCCGAAGCCTGGTACCCAACCCTTGCGGTCTTGATGATCGCTGTTGGCCTTATCATTACCGCCTCGTTTTTCATGTAAGTTATATTGGATCTGTCTCTCTGTTGCAAAATGAAATCTGGTTGATGTTAATTATTCAACGTGAAATGATTGGTTTTCCCCCTTTCTCGTTCTTTGCAAGTAGATCAGGGTTTGTTTAGTCTACTTCCAGGCATTTGTTACTTGCTTAATTCTCTTTGATTACAATGGAGTTGTTAGAACATAATTAGTTGTGAAGTTTACAAGTTTCTGATCTTTGGTTCGGAAGTGTGGGAATTTCTTGATCCAATCAAGTACCATTATATTTTTGTACCATCCATACTGAAGTTGAGAAACATTGTGAAATTTAAGTTTGAATGTGTTGACATTCATCTATTTCCTTCAGAGATGTTCTTTAGTAGGCTTCAGGCTTTTCATCAAACTCACGGTGGGTCTAATTTTCATTATCCAAGCCTTTGTTTATATCGTCCAGCAGAAGGCCATTGGACCATCGATAGGAAAGTCCACCTTGCTCTCTTTCACAAGAATTCCTCCATTTAAGGACAGACGTTCAACCTTTAAAAGTGAACAATGGAGGTTAATCCCCGACTCTAGGAAGGTAGACTCCGAACTACGAGTCCTTTGCTTGACGTAGAGGAAGATTTTTGTTGTTTCGGGGTCAAGAAATTGTGAAGCTTTCCCCCTTCCGCTAAATTTCTATTTCTGCCACACTTTCAGAATTTTATTTCAAAAGAAAAATGGGGATAAGTACTCCCTTCCTTCAACGAAAGCGATCCTCCAGGAAGAGAATTTAGAGATGGATAGAATTAGTATCTTGATAGTTATCTTTTCCCTTCTTTGGTGATTCATCCAAGGACGCTCTCCGCAACAGATTCCCCTTTGGACTTAGAAATCGTCGAGAGGAGCTCCCTTTTCCAGCGACTTTCTAAAACTTCAGCTAGAATTTTATAAACACTGGTTATGAAACTAATAGGCCAAAAGTCCTTAACCTTGTTAGCATTCTCCTTCTCTGAATTAAGGCAGACAAACATTTCAGAGATAGAACTATTCAAGATTCCCTCTCAAATAGTTCCTTAAAAACTCCTTCCAAGTCCCCTTTTAAAAAAGATCCCAATTGTTTCGATAAAGGGCCATAAGAAAAACCATCAAGAACTAGTGACTTTGCCCTATCACTTTCGAAGACTTATTGGTTGATCTCCCCTAAAGTGAAAGGCGCTACCAAATCATCCTTTTCCCTTTCAGAGATAGGGCTCCAATCAATTCAAAATAACAAAAGGTTTAGGAACCACTTTGAGATCGTAGAGATTAGAGAAGTAAAAGAGAGGACCTCTTCCTAAGCTTCCCGTTATCTTTAACTCAGGGCCCAAGTTCCTACTTCTTCTGCCACTAAGCCCCCTTGTGGAAGAAGGAAGTGTTGCAATCTTCTTCCTTTGCCCATTTAATCTTGGATTTTTGCCTCCAAGTACAAGTTTCTTTTCTGATCAGCTCTACAAATTCCTCTCAACTTTAAAAAAATCAACCAAACGACTGACTACTTCTGATGCTTTATAATGTAGTATGATTTGAGTGATGAGTAAAGTCCCATTTCTCATGGACTGCGGGAAACTAATATGGTTATTAATATTCGTGTTTGGCAGTTTGATGATTTTATGTTTCTGTTTATTGTCACCCTTGACTTGATGGTGACGGACTGTACGCCATCACAGATCTTGTTTGTTGCTTTATGTAGTTGTAGCAGTATGCAAAGCACAAATGCTTCTAATGGAGACTGATTATAGTCTCTCTATTAAGATGATAAGCAATACGAAGAGAAAATTATTGAACTTGATTGATTGGGATTTGTAATTTGATCAAATTGATTTTTGCTGTCAAGATCTATAATACAATCAACTTTCATAATTTTCTGTTATGGTAGGAGCTGGATGACATTTTCGTATCATTCCAATAGATCAAATGTTACTGTCATATCGTTATGGAGTCTATTGTTTTGGCGCTCTAACCATATCAGCTATCATTTGCAGCTATGAAGCTACAACTTCTAGGAAAAACCGTAGTCTGGCCACGGAACTTACGAGAGGAGCCGTTGCCTCAGTTTTCTTGGTATGGATCTCTCTGTAGATCTCTTTAATCGGTTATGCAGATTTTCTCCTTCTCACTGTCAGTGAGAGGAGATTATCTTTGTTTTGAGATTGAGTATTGTACATCTCTGGTTAGTTATTGCCAAATTTGATGATGGAGCTTGATGTTATATATTTACAGCTCTACGTTGTTGTCTGTTGCAGGGTTTTGGATCCTTGTTCTTGCTGCTTGCTTCTGGTGTTTATGTCTAACCTATTAGAAGAAGATGTTGAGAACTTTTTTTTTATTTAGCGGACTCAGTTTTACATGTATGATGCCTGGGCTAGGACTACTTCCGTAAAAACAGTGGTCTATTTTTCCAATGAGGAATGAATATTTTCGATATTTTCTTTTTTAGAATGGAGCATTATACTCATACAATGCATTATGATTGAAGGGATTTTGATTTTGCTGACTCGAAAATGGCAGTTTTATGAACAAATCAGCTTTCCCCAGAATCAGAGTCAATTGAAAATGGCAATTGGAAGTAGCAAGGTTGGGTTGATATGGGCTTGCTTGATTCCAGCCCATATGTAGGGACTAGGGAGCGTTCCCAATCCTTGCTAACCAGAATTGTCCCGTAGGTTTGATTTGAGCCCTGTTCGTTAACTTAGCTCGCTTTTTATTTTCATTTTTATAATCC

mRNA sequence

TTTTGTAGTCAAAATTAGCCTTTTCATTTCAGCAAAATAACCCTAAAGTACTCCGTTCCCCAAATCTCTCTTCCTTCAGTCGTCAATTCCAGTTGACTAGAGAGAACTCCAGATCTCTTTGGAATCAGTTCTTCGCCCCCCACCGGATTTGATGGCTCCGAAACCTGTTACGAGTCCCGTCCCCGAAGCCTGGTACCCAACCCTTGCGGTCTTGATGATCGCTGTTGGCCTTATCATTACCGCCTCGTTTTTCATCTATGAAGCTACAACTTCTAGGAAAAACCGTAGTCTGGCCACGGAACTTACGAGAGGAGCCGTTGCCTCAGTTTTCTTGGGTTTTGGATCCTTGTTCTTGCTGCTTGCTTCTGGTGTTTATGTCTAACCTATTAGAAGAAGATGTTGAGAACTTTTTTTTTATTTAGCGGACTCAGTTTTACATGTATGATGCCTGGGCTAGGACTACTTCCGTAAAAACAGTGGTCTATTTTTCCAATGAGGAATGAATATTTTCGATATTTTCTTTTTTAGAATGGAGCATTATACTCATACAATGCATTATGATTGAAGGGATTTTGATTTTGCTGACTCGAAAATGGCAGTTTTATGAACAAATCAGCTTTCCCCAGAATCAGAGTCAATTGAAAATGGCAATTGGAAGTAGCAAGGTTGGGTTGATATGGGCTTGCTTGATTCCAGCCCATATGTAGGGACTAGGGAGCGTTCCCAATCCTTGCTAACCAGAATTGTCCCGTAGGTTTGATTTGAGCCCTGTTCGTTAACTTAGCTCGCTTTTTATTTTCATTTTTATAATCC

Coding sequence (CDS)

ATGGCTCCGAAACCTGTTACGAGTCCCGTCCCCGAAGCCTGGTACCCAACCCTTGCGGTCTTGATGATCGCTGTTGGCCTTATCATTACCGCCTCGTTTTTCATCTATGAAGCTACAACTTCTAGGAAAAACCGTAGTCTGGCCACGGAACTTACGAGAGGAGCCGTTGCCTCAGTTTTCTTGGGTTTTGGATCCTTGTTCTTGCTGCTTGCTTCTGGTGTTTATGTCTAA

Protein sequence

MAPKPVTSPVPEAWYPTLAVLMIAVGLIITASFFIYEATTSRKNRSLATELTRGAVASVFLGFGSLFLLLASGVYV

Homology

[Close]

BLAST of Cp4.1LG04g10600 vs. ExPASy Swiss-Prot
Match: E2RKN8 (Transmembrane protein 258 OS=Canis lupus familiaris OX=9615 GN=TMEM258 PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 8.0e-11
Identity = 35/70 (50.00%), Postives = 49/70 (70.00%), Query Frame = 0


Query: 7  TSPVPEAWYPTLAVLMIAVGLIITASFFIYEATTSRKNRSLATELTRGAVASVFLGFGSL 66
          TSPV  A +P L V+++A+G+  TA FF+YE T+++  R +  EL    VAS+F+GFG L
Sbjct: 10 TSPVNPAVFPHLTVVLLAIGMFFTAWFFVYEVTSTKYTRDICKELLISLVASLFMGFGVL 69

Query: 67 FLLLASGVYV 77
          FLLL  G+YV
Sbjct: 70 FLLLWVGIYV 79

[Close]

BLAST of Cp4.1LG04g10600 vs. ExPASy Swiss-Prot
Match: Q76LT9 (Transmembrane protein 258 OS=Gallus gallus OX=9031 GN=TMEM258 PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.4e-10
Identity = 35/70 (50.00%), Postives = 49/70 (70.00%), Query Frame = 0


Query: 7  TSPVPEAWYPTLAVLMIAVGLIITASFFIYEATTSRKNRSLATELTRGAVASVFLGFGSL 66
          TSPV  A +P L V+++A+G+  TA FF+YE T+++  R +  EL    VAS+F+GFG L
Sbjct: 10 TSPVNPAVFPHLTVVLLAIGMFFTAWFFVYEVTSTKYTRDIYKELLISLVASLFMGFGVL 69

Query: 67 FLLLASGVYV 77
          FLLL  G+YV
Sbjct: 70 FLLLWVGIYV 79

[Close]

BLAST of Cp4.1LG04g10600 vs. ExPASy Swiss-Prot
Match: P61165 (Transmembrane protein 258 OS=Homo sapiens OX=9606 GN=TMEM258 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.4e-10
Identity = 35/70 (50.00%), Postives = 49/70 (70.00%), Query Frame = 0


Query: 7  TSPVPEAWYPTLAVLMIAVGLIITASFFIYEATTSRKNRSLATELTRGAVASVFLGFGSL 66
          TSPV  A +P L V+++A+G+  TA FF+YE T+++  R +  EL    VAS+F+GFG L
Sbjct: 10 TSPVNPAVFPHLTVVLLAIGMFFTAWFFVYEVTSTKYTRDIYKELLISLVASLFMGFGVL 69

Query: 67 FLLLASGVYV 77
          FLLL  G+YV
Sbjct: 70 FLLLWVGIYV 79

[Close]

BLAST of Cp4.1LG04g10600 vs. ExPASy Swiss-Prot
Match: P61166 (Transmembrane protein 258 OS=Mus musculus OX=10090 GN=Tmem258 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.4e-10
Identity = 35/70 (50.00%), Postives = 49/70 (70.00%), Query Frame = 0


Query: 7  TSPVPEAWYPTLAVLMIAVGLIITASFFIYEATTSRKNRSLATELTRGAVASVFLGFGSL 66
          TSPV  A +P L V+++A+G+  TA FF+YE T+++  R +  EL    VAS+F+GFG L
Sbjct: 10 TSPVNPAVFPHLTVVLLAIGMFFTAWFFVYEVTSTKYTRDIYKELLISLVASLFMGFGVL 69

Query: 67 FLLLASGVYV 77
          FLLL  G+YV
Sbjct: 70 FLLLWVGIYV 79

[Close]

BLAST of Cp4.1LG04g10600 vs. ExPASy Swiss-Prot
Match: Q32P84 (Transmembrane protein 258 OS=Bos taurus OX=9913 GN=TMEM258 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 1.8e-10
Identity = 34/70 (48.57%), Postives = 49/70 (70.00%), Query Frame = 0


Query: 7  TSPVPEAWYPTLAVLMIAVGLIITASFFIYEATTSRKNRSLATELTRGAVASVFLGFGSL 66
          TSPV  A +P L V+++A+G+  TA FF+YE T+++  R +  EL    VAS+F+GFG L
Sbjct: 10 TSPVNPAVFPHLTVVLLAIGMFFTAWFFVYEVTSTKYTRDIYKELLISLVASLFMGFGVL 69

Query: 67 FLLLASGVYV 77
          FLLL  G+Y+
Sbjct: 70 FLLLWVGIYI 79

[Close]

BLAST of Cp4.1LG04g10600 vs. NCBI nr
Match: XP_022926045.1 (transmembrane protein 258-like [Cucurbita moschata] >XP_022968664.1 transmembrane protein 258-like [Cucurbita maxima] >XP_023530318.1 transmembrane protein 258-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 142 bits (358), Expect = 1.98e-42
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 1  MAPKPVTSPVPEAWYPTLAVLMIAVGLIITASFFIYEATTSRKNRSLATELTRGAVASVF 60
          MAPKPVTSPVPEAWYPTLAVLMIAVGLIITASFFIYEATTSRKNRSLATELTRGAVASVF
Sbjct: 1  MAPKPVTSPVPEAWYPTLAVLMIAVGLIITASFFIYEATTSRKNRSLATELTRGAVASVF 60

Query: 61 LGFGSLFLLLASGVYV 76
          LGFGSLFLLLASGVYV
Sbjct: 61 LGFGSLFLLLASGVYV 76

[Close]

BLAST of Cp4.1LG04g10600 vs. NCBI nr
Match: XP_038879770.1 (transmembrane protein 258 [Benincasa hispida])

HSP 1 Score: 136 bits (342), Expect = 5.48e-40
Identity = 70/76 (92.11%), Postives = 75/76 (98.68%), Query Frame = 0


Query: 1  MAPKPVTSPVPEAWYPTLAVLMIAVGLIITASFFIYEATTSRKNRSLATELTRGAVASVF 60
          MAPKPVTSPVPEAWYPTLAVLMI+VGLIITASFFIYEATTSRKNRSLA E+TRG++AS+F
Sbjct: 1  MAPKPVTSPVPEAWYPTLAVLMISVGLIITASFFIYEATTSRKNRSLAKEITRGSIASIF 60

Query: 61 LGFGSLFLLLASGVYV 76
          LGFGSLFLLLASGVYV
Sbjct: 61 LGFGSLFLLLASGVYV 76

[Close]

BLAST of Cp4.1LG04g10600 vs. NCBI nr
Match: XP_004135715.1 (transmembrane protein 258 [Cucumis sativus] >XP_008450856.1 PREDICTED: transmembrane protein 258 [Cucumis melo] >KGN66242.1 hypothetical protein Csa_007439 [Cucumis sativus] >TYK10087.1 hypothetical protein E5676_scaffold16G002270 [Cucumis melo var. makuwa])

HSP 1 Score: 134 bits (338), Expect = 2.24e-39
Identity = 69/76 (90.79%), Postives = 74/76 (97.37%), Query Frame = 0


Query: 1  MAPKPVTSPVPEAWYPTLAVLMIAVGLIITASFFIYEATTSRKNRSLATELTRGAVASVF 60
          MAPKPVTSPVPEAWYPTLAVLMI+VGLI+TASFFIYEAT+SRKNRSLA ELTRG +AS+F
Sbjct: 1  MAPKPVTSPVPEAWYPTLAVLMISVGLIVTASFFIYEATSSRKNRSLAKELTRGTIASIF 60

Query: 61 LGFGSLFLLLASGVYV 76
          LGFGSLFLLLASGVYV
Sbjct: 61 LGFGSLFLLLASGVYV 76

[Close]

BLAST of Cp4.1LG04g10600 vs. NCBI nr
Match: XP_022147745.1 (transmembrane protein 258 [Momordica charantia])

HSP 1 Score: 130 bits (328), Expect = 7.51e-38
Identity = 71/76 (93.42%), Postives = 71/76 (93.42%), Query Frame = 0


Query: 1  MAPKPVTSPVPEAWYPTLAVLMIAVGLIITASFFIYEATTSRKNRSLATELTRGAVASVF 60
          MAPKPVTSPV EAWYPTLAV MIAVGLIITASFFIYEAT SRKNR LA ELTRGAVASVF
Sbjct: 1  MAPKPVTSPVSEAWYPTLAVSMIAVGLIITASFFIYEATVSRKNRCLAKELTRGAVASVF 60

Query: 61 LGFGSLFLLLASGVYV 76
          LGFGSLFLLLASGVYV
Sbjct: 61 LGFGSLFLLLASGVYV 76

[Close]

BLAST of Cp4.1LG04g10600 vs. NCBI nr
Match: KAG6588039.1 (hypothetical protein SDJN03_16604, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 142 bits (358), Expect = 9.49e-38
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 1   MAPKPVTSPVPEAWYPTLAVLMIAVGLIITASFFIYEATTSRKNRSLATELTRGAVASVF 60
           MAPKPVTSPVPEAWYPTLAVLMIAVGLIITASFFIYEATTSRKNRSLATELTRGAVASVF
Sbjct: 493 MAPKPVTSPVPEAWYPTLAVLMIAVGLIITASFFIYEATTSRKNRSLATELTRGAVASVF 552

Query: 61  LGFGSLFLLLASGVYV 76
           LGFGSLFLLLASGVYV
Sbjct: 553 LGFGSLFLLLASGVYV 568

[Close]

BLAST of Cp4.1LG04g10600 vs. ExPASy TrEMBL
Match: A0A6J1I0B1 (Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST5 OS=Cucurbita maxima OX=3661 GN=LOC111467831 PE=3 SV=1)

HSP 1 Score: 142 bits (358), Expect = 9.60e-43
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 1  MAPKPVTSPVPEAWYPTLAVLMIAVGLIITASFFIYEATTSRKNRSLATELTRGAVASVF 60
          MAPKPVTSPVPEAWYPTLAVLMIAVGLIITASFFIYEATTSRKNRSLATELTRGAVASVF
Sbjct: 1  MAPKPVTSPVPEAWYPTLAVLMIAVGLIITASFFIYEATTSRKNRSLATELTRGAVASVF 60

Query: 61 LGFGSLFLLLASGVYV 76
          LGFGSLFLLLASGVYV
Sbjct: 61 LGFGSLFLLLASGVYV 76

[Close]

BLAST of Cp4.1LG04g10600 vs. ExPASy TrEMBL
Match: A0A6J1EJW7 (Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST5 OS=Cucurbita moschata OX=3662 GN=LOC111433278 PE=3 SV=1)

HSP 1 Score: 142 bits (358), Expect = 9.60e-43
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 1  MAPKPVTSPVPEAWYPTLAVLMIAVGLIITASFFIYEATTSRKNRSLATELTRGAVASVF 60
          MAPKPVTSPVPEAWYPTLAVLMIAVGLIITASFFIYEATTSRKNRSLATELTRGAVASVF
Sbjct: 1  MAPKPVTSPVPEAWYPTLAVLMIAVGLIITASFFIYEATTSRKNRSLATELTRGAVASVF 60

Query: 61 LGFGSLFLLLASGVYV 76
          LGFGSLFLLLASGVYV
Sbjct: 61 LGFGSLFLLLASGVYV 76

[Close]

BLAST of Cp4.1LG04g10600 vs. ExPASy TrEMBL
Match: A0A5D3CDN3 (Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002270 PE=3 SV=1)

HSP 1 Score: 134 bits (338), Expect = 1.08e-39
Identity = 69/76 (90.79%), Postives = 74/76 (97.37%), Query Frame = 0


Query: 1  MAPKPVTSPVPEAWYPTLAVLMIAVGLIITASFFIYEATTSRKNRSLATELTRGAVASVF 60
          MAPKPVTSPVPEAWYPTLAVLMI+VGLI+TASFFIYEAT+SRKNRSLA ELTRG +AS+F
Sbjct: 1  MAPKPVTSPVPEAWYPTLAVLMISVGLIVTASFFIYEATSSRKNRSLAKELTRGTIASIF 60

Query: 61 LGFGSLFLLLASGVYV 76
          LGFGSLFLLLASGVYV
Sbjct: 61 LGFGSLFLLLASGVYV 76

[Close]

BLAST of Cp4.1LG04g10600 vs. ExPASy TrEMBL
Match: A0A0A0LZE8 (Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST5 OS=Cucumis sativus OX=3659 GN=Csa_1G588510 PE=3 SV=1)

HSP 1 Score: 134 bits (338), Expect = 1.08e-39
Identity = 69/76 (90.79%), Postives = 74/76 (97.37%), Query Frame = 0


Query: 1  MAPKPVTSPVPEAWYPTLAVLMIAVGLIITASFFIYEATTSRKNRSLATELTRGAVASVF 60
          MAPKPVTSPVPEAWYPTLAVLMI+VGLI+TASFFIYEAT+SRKNRSLA ELTRG +AS+F
Sbjct: 1  MAPKPVTSPVPEAWYPTLAVLMISVGLIVTASFFIYEATSSRKNRSLAKELTRGTIASIF 60

Query: 61 LGFGSLFLLLASGVYV 76
          LGFGSLFLLLASGVYV
Sbjct: 61 LGFGSLFLLLASGVYV 76

[Close]

BLAST of Cp4.1LG04g10600 vs. ExPASy TrEMBL
Match: A0A1S3BR87 (Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST5 OS=Cucumis melo OX=3656 GN=LOC103492326 PE=3 SV=1)

HSP 1 Score: 134 bits (338), Expect = 1.08e-39
Identity = 69/76 (90.79%), Postives = 74/76 (97.37%), Query Frame = 0


Query: 1  MAPKPVTSPVPEAWYPTLAVLMIAVGLIITASFFIYEATTSRKNRSLATELTRGAVASVF 60
          MAPKPVTSPVPEAWYPTLAVLMI+VGLI+TASFFIYEAT+SRKNRSLA ELTRG +AS+F
Sbjct: 1  MAPKPVTSPVPEAWYPTLAVLMISVGLIVTASFFIYEATSSRKNRSLAKELTRGTIASIF 60

Query: 61 LGFGSLFLLLASGVYV 76
          LGFGSLFLLLASGVYV
Sbjct: 61 LGFGSLFLLLASGVYV 76

[Close]

BLAST of Cp4.1LG04g10600 vs. TAIR 10
Match: AT4G29735.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0197 (InterPro:IPR007915); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 106.3 bits (264), Expect = 1.1e-23
Identity = 56/76 (73.68%), Postives = 64/76 (84.21%), Query Frame = 0


Query: 1  MAPKPVTSPVPEAWYPTLAVLMIAVGLIITASFFIYEATTSRKNRSLATELTRGAVASVF 60
          MA KP+ SP+P A YPTL+V  +A+GL+ITA FFIYEAT+SRKNRS+  EL   AVASVF
Sbjct: 1  MAAKPIASPIPVALYPTLSVFTLAIGLVITAIFFIYEATSSRKNRSVGKELATSAVASVF 60

Query: 61 LGFGSLFLLLASGVYV 77
          LGFGSLFLLLASGVYV
Sbjct: 61 LGFGSLFLLLASGVYV 76

[Close]

BLAST of Cp4.1LG04g10600 vs. TAIR 10
Match: AT4G29735.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0197 (InterPro:IPR007915); Has 190 Blast hits to 190 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 133; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). )

HSP 1 Score: 93.6 bits (231), Expect = 7.4e-20
Identity = 56/98 (57.14%), Postives = 64/98 (65.31%), Query Frame = 0


Query: 1  MAPKPVTSPVPEAWYPTLAVLMIAVGLIITASFF----------------------IYEA 60
          MA KP+ SP+P A YPTL+V  +A+GL+ITA FF                      IYEA
Sbjct: 1  MAAKPIASPIPVALYPTLSVFTLAIGLVITAIFFIVEHLPFKGWQVLGDMIRFVKVIYEA 60

Query: 61 TTSRKNRSLATELTRGAVASVFLGFGSLFLLLASGVYV 77
          T+SRKNRS+  EL   AVASVFLGFGSLFLLLASGVYV
Sbjct: 61 TSSRKNRSVGKELATSAVASVFLGFGSLFLLLASGVYV 98

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g10600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
E2RKN8	8.0e-11	50.00	Transmembrane protein 258 OS=Canis lupus familiaris OX=9615 GN=TMEM258 PE=1 SV=1	[more]
Q76LT9	1.4e-10	50.00	Transmembrane protein 258 OS=Gallus gallus OX=9031 GN=TMEM258 PE=3 SV=1	[more]
P61165	1.4e-10	50.00	Transmembrane protein 258 OS=Homo sapiens OX=9606 GN=TMEM258 PE=1 SV=1	[more]
P61166	1.4e-10	50.00	Transmembrane protein 258 OS=Mus musculus OX=10090 GN=Tmem258 PE=1 SV=1	[more]
Q32P84	1.8e-10	48.57	Transmembrane protein 258 OS=Bos taurus OX=9913 GN=TMEM258 PE=3 SV=1	[more]

BLAST of Cp4.1LG04g10600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022926045.1	1.98e-42	100.00	transmembrane protein 258-like [Cucurbita moschata] >XP_022968664.1 transmembran...	[more]
XP_038879770.1	5.48e-40	92.11	transmembrane protein 258 [Benincasa hispida]	[more]
XP_004135715.1	2.24e-39	90.79	transmembrane protein 258 [Cucumis sativus] >XP_008450856.1 PREDICTED: transmemb...	[more]
XP_022147745.1	7.51e-38	93.42	transmembrane protein 258 [Momordica charantia]	[more]
KAG6588039.1	9.49e-38	100.00	hypothetical protein SDJN03_16604, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Cp4.1LG04g10600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I0B1	9.60e-43	100.00	Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST5 OS=Cu...	[more]
A0A6J1EJW7	9.60e-43	100.00	Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST5 OS=Cu...	[more]
A0A5D3CDN3	1.08e-39	90.79	Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST5 OS=Cu...	[more]
A0A0A0LZE8	1.08e-39	90.79	Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST5 OS=Cu...	[more]
A0A1S3BR87	1.08e-39	90.79	Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST5 OS=Cu...	[more]

BLAST of Cp4.1LG04g10600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29735.1	1.1e-23	73.68	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G29735.2	7.4e-20	57.14	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007915	Oligosaccharyltransferase complex subunit	PFAM	PF05251	Ost5	coord: 4..76 e-value: 3.6E-26 score: 91.2
IPR007915	Oligosaccharyltransferase complex subunit	PANTHER	PTHR13636	UNCHARACTERIZED	coord: 3..76
None	No IPR available	PANTHER	PTHR13636:SF2	TRANSMEMBRANE PROTEIN 258-LIKE	coord: 3..76

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g10600.1	Cp4.1LG04g10600.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006487	protein N-linked glycosylation
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0034998	oligosaccharyltransferase I complex