Cp4.1LG04g10470 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG04g10470
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description60S ribosomal protein L31
LocationCp4.1LG04: 9418769 .. 9420781 (+)
RNA-Seq ExpressionCp4.1LG04g10470
SyntenyCp4.1LG04g10470
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAAGTCACTTTTAAAAGTATAAAAATTCAAAACGAATATACCAAGACAAAAAATGAACTAAAGTTAAAATATTTCACCTTAAAAGTATATAAACTAAAATGAAATAATATTAAAAAAACTAAAATTTTAATTTAAAAAAAAAATAATAATGTGGGCCTATTCTTCCTTGGGCCGCAATCACTACTAAGCCCAATGGATCAAAACACTGATAAATTTGTACGACCCTGAAACTAGGGTATTGTGCACATTTAAGTTGTACCCCCTCTTCCTGGTGCATCCTTCAAACCCTAGCAAGGTCGCTCTGCTTCTGCCATTTTTAGGTTATCTAAAGTTCCGATTTCTTTGCTCAAACGGATTGAAATAGATAGACAATCGCCTTTGTGACGTTGTTGGTTTTGATTTTATGCTGCTTTTGCTTCGGATGTCAATTTCTCGACATTGTGTTGTTTTCATTCTTCATGATTTCGTTTTAACCGGTTGCAGGTGTAATCGAAGAAGCCGACTGTAGATATGGTTGAGAAAACGAAGGGGAGGAAGGAGGAGGTGGTCAGCAGAGAGTATACCATCAATCTACACAAGCGTCTGCATGGCTGGTACCAACTCATTCTTACATGTTCTTCCTTGCGTATTTACTCATTCCTCGCTGTCAACTGATGTCATACTGCTGTCCAATTAGATCTGTAAGCTGGTTTTTGATGTTCGGCCAATGTATATGGCGAGAGCATTTCAATTGCTTATGTTTTGAAATTATCTTCATTAGGAGGCCCTTTTTTCTCATGATTTTAATTATCTAAACTTGTAATCTGGCAACTGTTGTGGTAGGTCAACGTGGTTTTTTGTGTGGGTATACACTAATTATTGAAATTTCTATAAGATTAGATATTGAGGAAGAAAGATAAATTTTTGTCCGTGAATTTCTTTAAGAACACGTAGCGGTTGATCATAGAATAATGGCATGAACTGATAGTAACTTGGCTGTAGAGGGGTATTGAAGATGAAGACGAGATCGAGAAGAGTAATAATAATAGCTAAATCTTGGAGAATTTTTATCTAAATTTGTTGCGACAAAAAGTGAAGAGCACGGTTAAATATAGGTAGTTGTAAGTTTGTCAGGCATCTGTAATGTAATTGTAAACTATTGGACAAGCGGACTGGTGGATTGCTTATGCGTTGTTCTTTCTGTCATAACGCTCCTTTCCATTAGTAGTTTCTCCTCTTGCATTTTTGTGTTCGTAGTTCTTTCCCCCTCGTATTTTAGTTTTAATTTCAATAGTGAATTATACATTTCATAACACTGCAACAACTCCCTAATTCTCGTGCTTAACTTGTATTGTCTAAATAACAGCACCTTCAAGAAGAAGGCTCCCAAGGCCATCAAGGAGATAAGGAAGTTTGCAGAGAATGCAATGGGAACGAAGGACGTCAGGGTGGACGTGAAATTGAACAAGCATATCTGGAGCAGAGGAATTCGAAGTGTTCCAAGGAGAATTAGAGTCCGTATTGCACGCAAGAGGAACGACGACGAAGATGCGAAGGAAGAACTGTATTCGCTTGTTACGGTCGCAGAAATCCCAGCAGAAGGTTTGAAAGGATTAGGGACTAAGGTCATCGATGAAGAAGACTGATCTGATTCTCATACCGTTTGCCTTGTTACCTGGTACTTCCAACTTTTGGTGAAATTTTCGGTACAAGACTTGTTTCGAGTCAGAGTTATCCTTCATTGTCCTCCCTTTGGTGCACTTGTTTATTTCACTTTGAATACACTATTGGAAGCAGTTGATTGATTTAGTTATATTTAGTTTTTGGATTGTGTTCTTAACTTGAGAGGTTCTTCTCTTACACTTAATTTTGGCATCAATTTCATCTTTCATTTCTGAATTCTCCTCTTCTTTAACGTCCTGTTTCACTACCCATTGCAAATTCAAGTGGTAGTATGGAACGCTGATGATATGAACCCTAAGAGTTGGGCTATCATCATGATAAATTGCTGTGTATCTTCAAAGATCTAATCTG

mRNA sequence

TAAGTCACTTTTAAAAGTATAAAAATTCAAAACGAATATACCAAGACAAAAAATGAACTAAAGTTAAAATATTTCACCTTAAAAGTATATAAACTAAAATGAAATAATATTAAAAAAACTAAAATTTTAATTTAAAAAAAAAATAATAATGTGGGCCTATTCTTCCTTGGGCCGCAATCACTACTAAGCCCAATGGATCAAAACACTGATAAATTTGTACGACCCTGAAACTAGGGTATTGTGCACATTTAAGTTGTACCCCCTCTTCCTGGTGCATCCTTCAAACCCTAGCAAGGTCGCTCTGCTTCTGCCATTTTTAGGTGTAATCGAAGAAGCCGACTGTAGATATGGTTGAGAAAACGAAGGGGAGGAAGGAGGAGGTGGTCAGCAGAGAGTATACCATCAATCTACACAAGCGTCTGCATGGCTGCACCTTCAAGAAGAAGGCTCCCAAGGCCATCAAGGAGATAAGGAAGTTTGCAGAGAATGCAATGGGAACGAAGGACGTCAGGGTGGACGTGAAATTGAACAAGCATATCTGGAGCAGAGGAATTCGAAGTGTTCCAAGGAGAATTAGAGTCCGTATTGCACGCAAGAGGAACGACGACGAAGATGCGAAGGAAGAACTGTATTCGCTTGTTACGGTCGCAGAAATCCCAGCAGAAGGTTTGAAAGGATTAGGGACTAAGGTCATCGATGAAGAAGACTGATCTGATTCTCATACCGTTTGCCTTGTTACCTGGTACTTCCAACTTTTGGTGAAATTTTCGGTACAAGACTTGTTTCGAGTCAGAGTTATCCTTCATTGTCCTCCCTTTGGTGCACTTGTTTATTTCACTTTGAATACACTATTGGAAGCAGTTGATTGATTTAGTTATATTTAGTTTTTGGATTGTGTTCTTAACTTGAGAGGTTCTTCTCTTACACTTAATTTTGGCATCAATTTCATCTTTCATTTCTGAATTCTCCTCTTCTTTAACGTCCTGTTTCACTACCCATTGCAAATTCAAGTGGTAGTATGGAACGCTGATGATATGAACCCTAAGAGTTGGGCTATCATCATGATAAATTGCTGTGTATCTTCAAAGATCTAATCTG

Coding sequence (CDS)

ATGGTTGAGAAAACGAAGGGGAGGAAGGAGGAGGTGGTCAGCAGAGAGTATACCATCAATCTACACAAGCGTCTGCATGGCTGCACCTTCAAGAAGAAGGCTCCCAAGGCCATCAAGGAGATAAGGAAGTTTGCAGAGAATGCAATGGGAACGAAGGACGTCAGGGTGGACGTGAAATTGAACAAGCATATCTGGAGCAGAGGAATTCGAAGTGTTCCAAGGAGAATTAGAGTCCGTATTGCACGCAAGAGGAACGACGACGAAGATGCGAAGGAAGAACTGTATTCGCTTGTTACGGTCGCAGAAATCCCAGCAGAAGGTTTGAAAGGATTAGGGACTAAGGTCATCGATGAAGAAGACTGA

Protein sequence

MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED
Homology
[Close]
BLAST of Cp4.1LG04g10470 vs. ExPASy Swiss-Prot
Match: P46290 (60S ribosomal protein L31 OS=Nicotiana glutinosa OX=35889 GN=RPL31 PE=2 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 3.7e-55
Identity = 107/120 (89.17%), Postives = 115/120 (95.83%), Query Frame = 0 

Query: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKL 60
           M +KTKGRKEEVV+REYTINLHKRLH CTFKKKAP AIKEIRKFA+ AMGTKDVRVDVKL
Sbjct: 1   MSDKTKGRKEEVVTREYTINLHKRLHSCTFKKKAPTAIKEIRKFAQKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 120
           NK IWSRGIRSVPRR+RVRIARKRNDDEDAKEELYSLVTVAEIPA+GLKGLGTK+I++ED
Sbjct: 61  NKQIWSRGIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVAEIPAKGLKGLGTKIIEDED 120

[Close]
BLAST of Cp4.1LG04g10470 vs. ExPASy Swiss-Prot
Match: Q9MAV7 (60S ribosomal protein L31 OS=Panax ginseng OX=4054 GN=RPL31 PE=2 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 4.1e-54
Identity = 106/120 (88.33%), Postives = 114/120 (95.00%), Query Frame = 0 

Query: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKL 60
           MVEKTKGRKEEVV+REYTINLHKRLHGCTFKKKAP AIKEIRKFA+ AMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 120
           NK IWSRGIRSVPRR+RVRIARKRNDDEDAKEELYSLVTVA+IPA  LKGLG ++I+E+D
Sbjct: 61  NKQIWSRGIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVAKIPAGTLKGLGPQIIEEDD 120

[Close]
BLAST of Cp4.1LG04g10470 vs. ExPASy Swiss-Prot
Match: Q9M573 (60S ribosomal protein L31 OS=Perilla frutescens OX=48386 GN=RPL31 PE=2 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 7.1e-54
Identity = 107/116 (92.24%), Postives = 111/116 (95.69%), Query Frame = 0 

Query: 5   TKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLNKHI 64
           +K RKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFA+ AMGT DVRVDVKLNKHI
Sbjct: 6   SKPRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKHI 65

Query: 65  WSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 121
           WSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIP  GLKGLGT+VIDEE+
Sbjct: 66  WSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPEGGLKGLGTQVIDEEE 121

[Close]
BLAST of Cp4.1LG04g10470 vs. ExPASy Swiss-Prot
Match: P51420 (60S ribosomal protein L31-3 OS=Arabidopsis thaliana OX=3702 GN=RPL31C PE=3 SV=2)

HSP 1 Score: 203.8 bits (517), Expect = 1.1e-51
Identity = 101/119 (84.87%), Postives = 110/119 (92.44%), Query Frame = 0 

Query: 2   VEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLN 61
           + + KGRKEEV++REYTINLH+RLH CTFKKKAPKAIKEIRKFAE AMGTKDVRVDVKLN
Sbjct: 1   MSEKKGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 60

Query: 62  KHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 121
           K IWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTVAEIPAEGL GLGTKVI+EED
Sbjct: 61  KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED 119

[Close]
BLAST of Cp4.1LG04g10470 vs. ExPASy Swiss-Prot
Match: Q9STR1 (60S ribosomal protein L31-2 OS=Arabidopsis thaliana OX=3702 GN=RPL31B PE=3 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 2.5e-51
Identity = 100/119 (84.03%), Postives = 109/119 (91.60%), Query Frame = 0 

Query: 2   VEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLN 61
           + + KGRKEEVV+REYTINLH+RLH CTFKKKAPKAIKEIRKFAE  MGTKDVRVDVKLN
Sbjct: 1   MSEKKGRKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLN 60

Query: 62  KHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 121
           K IWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTVAEIPAEGL GLGTK+I+EED
Sbjct: 61  KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKIIEEED 119

[Close]
BLAST of Cp4.1LG04g10470 vs. NCBI nr
Match: XP_023531866.1 (60S ribosomal protein L31-like [Cucurbita pepo subsp. pepo] >XP_023531867.1 60S ribosomal protein L31-like [Cucurbita pepo subsp. pepo] >XP_023531868.1 60S ribosomal protein L31-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 229 bits (584), Expect = 1.59e-75
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKL 60
           MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 120

[Close]
BLAST of Cp4.1LG04g10470 vs. NCBI nr
Match: XP_004141039.1 (60S ribosomal protein L31 [Cucumis sativus] >KGN60552.1 hypothetical protein Csa_019297 [Cucumis sativus])

HSP 1 Score: 228 bits (580), Expect = 6.49e-75
Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKL 60
           MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVI+EED
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEED 120

[Close]
BLAST of Cp4.1LG04g10470 vs. NCBI nr
Match: XP_008450816.1 (PREDICTED: 60S ribosomal protein L31 [Cucumis melo] >XP_022928007.1 60S ribosomal protein L31 [Cucurbita moschata] >XP_022928011.1 60S ribosomal protein L31 [Cucurbita moschata] >XP_022928015.1 60S ribosomal protein L31 [Cucurbita moschata] >XP_022960857.1 60S ribosomal protein L31 [Cucurbita moschata] >XP_023516766.1 60S ribosomal protein L31 [Cucurbita pepo subsp. pepo] >XP_023516767.1 60S ribosomal protein L31 [Cucurbita pepo subsp. pepo] >KAG6588019.1 60S ribosomal protein L31, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021916.1 60S ribosomal protein L31 [Cucurbita argyrosperma subsp. argyrosperma] >TYK10122.1 60S ribosomal protein L31 [Cucumis melo var. makuwa] >KAG7023639.1 60S ribosomal protein L31, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 227 bits (578), Expect = 1.31e-74
Identity = 119/120 (99.17%), Postives = 119/120 (99.17%), Query Frame = 0 

Query: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKL 60
           MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAE AMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 120

[Close]
BLAST of Cp4.1LG04g10470 vs. NCBI nr
Match: XP_022987909.1 (60S ribosomal protein L31-like [Cucurbita maxima])

HSP 1 Score: 226 bits (575), Expect = 3.76e-74
Identity = 118/120 (98.33%), Postives = 119/120 (99.17%), Query Frame = 0 

Query: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKL 60
           MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAE AMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV+EIPAEGLKGLGTKVIDEED
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEIPAEGLKGLGTKVIDEED 120

[Close]
BLAST of Cp4.1LG04g10470 vs. NCBI nr
Match: XP_038878471.1 (60S ribosomal protein L31 [Benincasa hispida] >XP_038878472.1 60S ribosomal protein L31 [Benincasa hispida])

HSP 1 Score: 226 bits (575), Expect = 3.76e-74
Identity = 118/120 (98.33%), Postives = 119/120 (99.17%), Query Frame = 0 

Query: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKL 60
           MVEKTKGRKEEVV+REYTINLHKRLHGCTFKKKAPKAIKEIRKFAE AMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 120

[Close]
BLAST of Cp4.1LG04g10470 vs. ExPASy TrEMBL
Match: A0A0A0LIN9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000600 PE=3 SV=1)

HSP 1 Score: 228 bits (580), Expect = 3.14e-75
Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKL 60
           MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVI+EED
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEED 120

[Close]
BLAST of Cp4.1LG04g10470 vs. ExPASy TrEMBL
Match: A0A6J1EIQ4 (60S ribosomal protein L31 OS=Cucurbita moschata OX=3662 GN=LOC111434907 PE=3 SV=1)

HSP 1 Score: 227 bits (578), Expect = 6.35e-75
Identity = 119/120 (99.17%), Postives = 119/120 (99.17%), Query Frame = 0 

Query: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKL 60
           MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAE AMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 120

[Close]
BLAST of Cp4.1LG04g10470 vs. ExPASy TrEMBL
Match: A0A5D3CFU7 (60S ribosomal protein L31 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002650 PE=3 SV=1)

HSP 1 Score: 227 bits (578), Expect = 6.35e-75
Identity = 119/120 (99.17%), Postives = 119/120 (99.17%), Query Frame = 0 

Query: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKL 60
           MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAE AMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 120

[Close]
BLAST of Cp4.1LG04g10470 vs. ExPASy TrEMBL
Match: A0A1S3BR53 (60S ribosomal protein L31 OS=Cucumis melo OX=3656 GN=LOC103492289 PE=3 SV=1)

HSP 1 Score: 227 bits (578), Expect = 6.35e-75
Identity = 119/120 (99.17%), Postives = 119/120 (99.17%), Query Frame = 0 

Query: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKL 60
           MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAE AMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 120

[Close]
BLAST of Cp4.1LG04g10470 vs. ExPASy TrEMBL
Match: A0A6J1JK56 (60S ribosomal protein L31-like OS=Cucurbita maxima OX=3661 GN=LOC111485311 PE=3 SV=1)

HSP 1 Score: 226 bits (575), Expect = 1.82e-74
Identity = 118/120 (98.33%), Postives = 119/120 (99.17%), Query Frame = 0 

Query: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKL 60
           MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAE AMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV+EIPAEGLKGLGTKVIDEED
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEIPAEGLKGLGTKVIDEED 120

[Close]
BLAST of Cp4.1LG04g10470 vs. TAIR 10
Match: AT5G56710.1 (Ribosomal protein L31e family protein )

HSP 1 Score: 203.8 bits (517), Expect = 8.0e-53
Identity = 101/119 (84.87%), Postives = 110/119 (92.44%), Query Frame = 0 

Query: 2   VEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLN 61
           + + KGRKEEV++REYTINLH+RLH CTFKKKAPKAIKEIRKFAE AMGTKDVRVDVKLN
Sbjct: 1   MSEKKGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 60

Query: 62  KHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 121
           K IWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTVAEIPAEGL GLGTKVI+EED
Sbjct: 61  KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED 119

[Close]
BLAST of Cp4.1LG04g10470 vs. TAIR 10
Match: AT4G26230.1 (Ribosomal protein L31e family protein )

HSP 1 Score: 202.6 bits (514), Expect = 1.8e-52
Identity = 100/119 (84.03%), Postives = 109/119 (91.60%), Query Frame = 0 

Query: 2   VEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLN 61
           + + KGRKEEVV+REYTINLH+RLH CTFKKKAPKAIKEIRKFAE  MGTKDVRVDVKLN
Sbjct: 1   MSEKKGRKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLN 60

Query: 62  KHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 121
           K IWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTVAEIPAEGL GLGTK+I+EED
Sbjct: 61  KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKIIEEED 119

[Close]
BLAST of Cp4.1LG04g10470 vs. TAIR 10
Match: AT2G19740.1 (Ribosomal protein L31e family protein )

HSP 1 Score: 201.4 bits (511), Expect = 4.0e-52
Identity = 101/119 (84.87%), Postives = 109/119 (91.60%), Query Frame = 0 

Query: 2   VEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLN 61
           +EK KGRKEEVV+REYTINLH+RLH CTFKKKAP AIKEIRKFA  AMGTKDVRVDVKLN
Sbjct: 1   MEKGKGRKEEVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLN 60

Query: 62  KHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 121
           K IWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTVAEIPAEGL GLGTKVI+EE+
Sbjct: 61  KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEEE 119

[Close]
BLAST of Cp4.1LG04g10470 vs. TAIR 10
Match: AT5G56710.2 (Ribosomal protein L31e family protein )

HSP 1 Score: 129.4 bits (324), Expect = 1.9e-30
Identity = 72/119 (60.50%), Postives = 79/119 (66.39%), Query Frame = 0 

Query: 2   VEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAENAMGTKDVRVDVKLN 61
           + + KGRKEEV++REYTINLH+RLH CTFKKKAPKAIKEIRKFAE AMGTKDVRVD    
Sbjct: 1   MSEKKGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVD---- 60

Query: 62  KHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 121
                                         EE +SLVTVAEIPAEGL GLGTKVI+EED
Sbjct: 61  ------------------------------EEFFSLVTVAEIPAEGLSGLGTKVIEEED 85

The following BLAST results are available for this feature:
BLAST of Cp4.1LG04g10470 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P462903.7e-5589.1760S ribosomal protein L31 OS=Nicotiana glutinosa OX=35889 GN=RPL31 PE=2 SV=1[more]
Q9MAV74.1e-5488.3360S ribosomal protein L31 OS=Panax ginseng OX=4054 GN=RPL31 PE=2 SV=1[more]
Q9M5737.1e-5492.2460S ribosomal protein L31 OS=Perilla frutescens OX=48386 GN=RPL31 PE=2 SV=1[more]
P514201.1e-5184.8760S ribosomal protein L31-3 OS=Arabidopsis thaliana OX=3702 GN=RPL31C PE=3 SV=2[more]
Q9STR12.5e-5184.0360S ribosomal protein L31-2 OS=Arabidopsis thaliana OX=3702 GN=RPL31B PE=3 SV=1[more]
BLAST of Cp4.1LG04g10470 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023531866.11.59e-75100.0060S ribosomal protein L31-like [Cucurbita pepo subsp. pepo] >XP_023531867.1 60S ... [more]
XP_004141039.16.49e-7599.1760S ribosomal protein L31 [Cucumis sativus] >KGN60552.1 hypothetical protein Csa... [more]
XP_008450816.11.31e-7499.17PREDICTED: 60S ribosomal protein L31 [Cucumis melo] >XP_022928007.1 60S ribosoma... [more]
XP_022987909.13.76e-7498.3360S ribosomal protein L31-like [Cucurbita maxima][more]
XP_038878471.13.76e-7498.3360S ribosomal protein L31 [Benincasa hispida] >XP_038878472.1 60S ribosomal prot... [more]
BLAST of Cp4.1LG04g10470 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LIN93.14e-7599.17Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000600 PE=3 SV=1[more]
A0A6J1EIQ46.35e-7599.1760S ribosomal protein L31 OS=Cucurbita moschata OX=3662 GN=LOC111434907 PE=3 SV=... [more]
A0A5D3CFU76.35e-7599.1760S ribosomal protein L31 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A1S3BR536.35e-7599.1760S ribosomal protein L31 OS=Cucumis melo OX=3656 GN=LOC103492289 PE=3 SV=1[more]
A0A6J1JK561.82e-7498.3360S ribosomal protein L31-like OS=Cucurbita maxima OX=3661 GN=LOC111485311 PE=3 ... [more]
BLAST of Cp4.1LG04g10470 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G56710.18.0e-5384.87Ribosomal protein L31e family protein [more]
AT4G26230.11.8e-5284.03Ribosomal protein L31e family protein [more]
AT2G19740.14.0e-5284.87Ribosomal protein L31e family protein [more]
AT5G56710.21.9e-3060.50Ribosomal protein L31e family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000054Ribosomal protein L31eSMARTSM01380Ribosomal_L31e_2coord: 10..93
e-value: 9.0E-48
score: 174.7
IPR000054Ribosomal protein L31ePFAMPF01198Ribosomal_L31ecoord: 11..92
e-value: 1.6E-41
score: 140.3
IPR000054Ribosomal protein L31ePANTHERPTHR1095660S RIBOSOMAL PROTEIN L31coord: 1..120
IPR000054Ribosomal protein L31eCDDcd00463Ribosomal_L31ecoord: 9..92
e-value: 7.80893E-32
score: 105.729
IPR023621Ribosomal protein L31e domain superfamilyGENE3D3.10.440.10coord: 9..120
e-value: 5.2E-49
score: 166.8
IPR023621Ribosomal protein L31e domain superfamilySUPERFAMILY54575Ribosomal protein L31ecoord: 11..92
NoneNo IPR availablePANTHERPTHR10956:SF3360S RIBOSOMAL PROTEIN L31-2-RELATEDcoord: 1..120
IPR020052Ribosomal protein L31e, conserved sitePROSITEPS01144RIBOSOMAL_L31Ecoord: 54..68

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g10470.1Cp4.1LG04g10470.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0002181 cytoplasmic translation
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome