Cp4.1LG04g10460 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAGCCAGAGAAGAGCCTGAAGCCAAGCGGTAAATCCGATGTGCGGAAGGATCGGAAATCGGCGACGGGAATGAGCGGATCGCCGAAGAAAGGAGGCCATGGCGGCAAGTTTACTTGGGCGGGAGATGGTTACTCGCCGGCTGAGATCAGCTTCAGGGCTGAAGATATGGACGTGAAGGACCCTAACTTTGAAGATCCGGAAGAGGCAGTGGCGGTGGCGGTTTGA ATGAAGAAGCCAGAGAAGAGCCTGAAGCCAAGCGGTAAATCCGATGTGCGGAAGGATCGGAAATCGGCGACGGGAATGAGCGGATCGCCGAAGAAAGGAGGCCATGGCGGCAAGTTTACTTGGGCGGGAGATGGTTACTCGCCGGCTGAGATCAGCTTCAGGGCTGAAGATATGGACGTGAAGGACCCTAACTTTGAAGATCCGGAAGAGGCAGTGGCGGTGGCGGTTTGA ATGAAGAAGCCAGAGAAGAGCCTGAAGCCAAGCGGTAAATCCGATGTGCGGAAGGATCGGAAATCGGCGACGGGAATGAGCGGATCGCCGAAGAAAGGAGGCCATGGCGGCAAGTTTACTTGGGCGGGAGATGGTTACTCGCCGGCTGAGATCAGCTTCAGGGCTGAAGATATGGACGTGAAGGACCCTAACTTTGAAGATCCGGAAGAGGCAGTGGCGGTGGCGGTTTGA MKKPEKSLKPSGKSDVRKDRKSATGMSGSPKKGGHGGKFTWAGDGYSPAEISFRAEDMDVKDPNFEDPEEAVAVAV Homology
BLAST of Cp4.1LG04g10460 vs. NCBI nr
Match: KAG6588005.1 (hypothetical protein SDJN03_16570, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021899.1 hypothetical protein SDJN02_15627, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 149 bits (375), Expect = 5.04e-45 Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0
BLAST of Cp4.1LG04g10460 vs. NCBI nr
Match: TYK10141.1 (programmed cell death protein 4-like [Cucumis melo var. makuwa]) HSP 1 Score: 128 bits (322), Expect = 6.18e-37 Identity = 66/76 (86.84%), Postives = 71/76 (93.42%), Query Frame = 0
BLAST of Cp4.1LG04g10460 vs. NCBI nr
Match: XP_022730195.1 (programmed cell death protein 4-like [Durio zibethinus]) HSP 1 Score: 107 bits (266), Expect = 2.04e-28 Identity = 56/72 (77.78%), Postives = 59/72 (81.94%), Query Frame = 0
BLAST of Cp4.1LG04g10460 vs. NCBI nr
Match: EOY30624.1 (Uncharacterized protein TCM_037765 [Theobroma cacao]) HSP 1 Score: 106 bits (265), Expect = 2.90e-28 Identity = 55/72 (76.39%), Postives = 59/72 (81.94%), Query Frame = 0
BLAST of Cp4.1LG04g10460 vs. NCBI nr
Match: ADR71293.1 (hypothetical protein 17 [Hevea brasiliensis]) HSP 1 Score: 105 bits (261), Expect = 1.25e-27 Identity = 52/62 (83.87%), Postives = 54/62 (87.10%), Query Frame = 0
BLAST of Cp4.1LG04g10460 vs. ExPASy TrEMBL
Match: A0A5D3CE82 (Programmed cell death protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002840 PE=4 SV=1) HSP 1 Score: 128 bits (322), Expect = 2.99e-37 Identity = 66/76 (86.84%), Postives = 71/76 (93.42%), Query Frame = 0
BLAST of Cp4.1LG04g10460 vs. ExPASy TrEMBL
Match: A0A0A0LWP4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G575040 PE=4 SV=1) HSP 1 Score: 125 bits (315), Expect = 3.71e-36 Identity = 65/76 (85.53%), Postives = 69/76 (90.79%), Query Frame = 0
BLAST of Cp4.1LG04g10460 vs. ExPASy TrEMBL
Match: A0A803NU54 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 108 bits (269), Expect = 4.31e-29 Identity = 54/74 (72.97%), Postives = 62/74 (83.78%), Query Frame = 0
BLAST of Cp4.1LG04g10460 vs. ExPASy TrEMBL
Match: A0A6P5XPU9 (programmed cell death protein 4-like OS=Durio zibethinus OX=66656 GN=LOC111285167 PE=4 SV=1) HSP 1 Score: 107 bits (266), Expect = 9.88e-29 Identity = 56/72 (77.78%), Postives = 59/72 (81.94%), Query Frame = 0
BLAST of Cp4.1LG04g10460 vs. ExPASy TrEMBL
Match: A0A061GU30 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_037765 PE=4 SV=1) HSP 1 Score: 106 bits (265), Expect = 1.40e-28 Identity = 55/72 (76.39%), Postives = 59/72 (81.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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