Cp4.1LG04g10090 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAACTCCCCACCCCTCCCCTGCCTACGCCCTCGTCCTCCTCCTCCTCTTCCTCTTCCTCTTCCGGTTTATGTCCGTCGACGCCGGAGGAATTGAGCGAAATCGTGGAGCTTCCAAGCCTGGGGACGAGTTACGAAACAACCGAATTGGGGAAAGAGTTCGTATTCGCTGACTCATTGGAAGGTTGGCTTTATTCATACCCATGGTATAACAGAGTGAGCAATGTAGAAGAAGAAGAAGAAGAAGAAGATTACAGGTTGTTCGGAGACCAGATTTCAATGGCGGATTATACACACACTTGGATTCCCACTACCACACCCTTCGAAACATTCTTGTGGCCACATTAA ATGGAACTCCCCACCCCTCCCCTGCCTACGCCCTCGTCCTCCTCCTCCTCTTCCTCTTCCTCTTCCGGTTTATGTCCGTCGACGCCGGAGGAATTGAGCGAAATCGTGGAGCTTCCAAGCCTGGGGACGAGTTACGAAACAACCGAATTGGGGAAAGAGTTCGTATTCGCTGACTCATTGGAAGGTTGGCTTTATTCATACCCATGGTATAACAGAGTGAGCAATGTAGAAGAAGAAGAAGAAGAAGAAGATTACAGGTTGTTCGGAGACCAGATTTCAATGGCGGATTATACACACACTTGGATTCCCACTACCACACCCTTCGAAACATTCTTGTGGCCACATTAA ATGGAACTCCCCACCCCTCCCCTGCCTACGCCCTCGTCCTCCTCCTCCTCTTCCTCTTCCTCTTCCGGTTTATGTCCGTCGACGCCGGAGGAATTGAGCGAAATCGTGGAGCTTCCAAGCCTGGGGACGAGTTACGAAACAACCGAATTGGGGAAAGAGTTCGTATTCGCTGACTCATTGGAAGGTTGGCTTTATTCATACCCATGGTATAACAGAGTGAGCAATGTAGAAGAAGAAGAAGAAGAAGAAGATTACAGGTTGTTCGGAGACCAGATTTCAATGGCGGATTATACACACACTTGGATTCCCACTACCACACCCTTCGAAACATTCTTGTGGCCACATTAA MELPTPPLPTPSSSSSSSSSSSGLCPSTPEELSEIVELPSLGTSYETTELGKEFVFADSLEGWLYSYPWYNRVSNVEEEEEEEDYRLFGDQISMADYTHTWIPTTTPFETFLWPH Homology
BLAST of Cp4.1LG04g10090 vs. ExPASy Swiss-Prot
Match: Q39127 (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN=TINY PE=2 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 2.4e-06 Identity = 34/61 (55.74%), Postives = 41/61 (67.21%), Query Frame = 0
BLAST of Cp4.1LG04g10090 vs. ExPASy Swiss-Prot
Match: Q9LYD3 (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DREB3 PE=2 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 4.4e-05 Identity = 37/77 (48.05%), Postives = 45/77 (58.44%), Query Frame = 0
BLAST of Cp4.1LG04g10090 vs. ExPASy Swiss-Prot
Match: O80654 (Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana OX=3702 GN=ERF037 PE=1 SV=1) HSP 1 Score: 45.1 bits (105), Expect = 6.4e-04 Identity = 36/65 (55.38%), Postives = 41/65 (63.08%), Query Frame = 0
BLAST of Cp4.1LG04g10090 vs. NCBI nr
Match: XP_023531433.1 (dehydration-responsive element-binding protein 3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 231 bits (590), Expect = 1.84e-74 Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0
BLAST of Cp4.1LG04g10090 vs. NCBI nr
Match: XP_022933229.1 (ethylene-responsive transcription factor TINY-like [Cucurbita moschata]) HSP 1 Score: 218 bits (556), Expect = 2.76e-69 Identity = 114/122 (93.44%), Postives = 114/122 (93.44%), Query Frame = 0
BLAST of Cp4.1LG04g10090 vs. NCBI nr
Match: XP_022973678.1 (ethylene-responsive transcription factor TINY-like [Cucurbita maxima]) HSP 1 Score: 213 bits (541), Expect = 5.04e-67 Identity = 111/118 (94.07%), Postives = 111/118 (94.07%), Query Frame = 0
BLAST of Cp4.1LG04g10090 vs. NCBI nr
Match: XP_038878688.1 (dehydration-responsive element-binding protein 3-like [Benincasa hispida]) HSP 1 Score: 155 bits (393), Expect = 1.01e-44 Identity = 85/116 (73.28%), Postives = 95/116 (81.90%), Query Frame = 0
BLAST of Cp4.1LG04g10090 vs. NCBI nr
Match: XP_004148719.2 (ethylene-responsive transcription factor TINY [Cucumis sativus] >KGN65347.1 hypothetical protein Csa_020047 [Cucumis sativus]) HSP 1 Score: 142 bits (359), Expect = 1.11e-39 Identity = 80/108 (74.07%), Postives = 90/108 (83.33%), Query Frame = 0
BLAST of Cp4.1LG04g10090 vs. ExPASy TrEMBL
Match: A0A6J1EZ61 (ethylene-responsive transcription factor TINY-like OS=Cucurbita moschata OX=3662 GN=LOC111440123 PE=4 SV=1) HSP 1 Score: 218 bits (556), Expect = 1.33e-69 Identity = 114/122 (93.44%), Postives = 114/122 (93.44%), Query Frame = 0
BLAST of Cp4.1LG04g10090 vs. ExPASy TrEMBL
Match: A0A6J1IDV7 (ethylene-responsive transcription factor TINY-like OS=Cucurbita maxima OX=3661 GN=LOC111472260 PE=4 SV=1) HSP 1 Score: 213 bits (541), Expect = 2.44e-67 Identity = 111/118 (94.07%), Postives = 111/118 (94.07%), Query Frame = 0
BLAST of Cp4.1LG04g10090 vs. ExPASy TrEMBL
Match: A0A0A0LWW4 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G364460 PE=4 SV=1) HSP 1 Score: 142 bits (359), Expect = 5.40e-40 Identity = 80/108 (74.07%), Postives = 90/108 (83.33%), Query Frame = 0
BLAST of Cp4.1LG04g10090 vs. ExPASy TrEMBL
Match: A0A5D3BH31 (Ethylene-responsive transcription factor TINY-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13158G00010 PE=4 SV=1) HSP 1 Score: 139 bits (351), Expect = 8.64e-39 Identity = 79/111 (71.17%), Postives = 90/111 (81.08%), Query Frame = 0
BLAST of Cp4.1LG04g10090 vs. ExPASy TrEMBL
Match: A0A1S3CI75 (ethylene-responsive transcription factor TINY-like OS=Cucumis melo OX=3656 GN=LOC103501045 PE=4 SV=1) HSP 1 Score: 139 bits (351), Expect = 8.64e-39 Identity = 79/111 (71.17%), Postives = 90/111 (81.08%), Query Frame = 0
BLAST of Cp4.1LG04g10090 vs. TAIR 10
Match: AT5G25810.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 53.1 bits (126), Expect = 1.7e-07 Identity = 34/61 (55.74%), Postives = 41/61 (67.21%), Query Frame = 0
BLAST of Cp4.1LG04g10090 vs. TAIR 10
Match: AT5G11590.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 48.9 bits (115), Expect = 3.2e-06 Identity = 37/77 (48.05%), Postives = 45/77 (58.44%), Query Frame = 0
BLAST of Cp4.1LG04g10090 vs. TAIR 10
Match: AT1G77200.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 45.1 bits (105), Expect = 4.6e-05 Identity = 36/65 (55.38%), Postives = 41/65 (63.08%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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