Cp4.1LG04g10050 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG04g10050
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	protein SPEAR1-like
Location	Cp4.1LG04: 9637360 .. 9638560 (-)
RNA-Seq Expression	Cp4.1LG04g10050
Synteny	Cp4.1LG04g10050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAGTGGTTATTTTGGGGAACCGGGTTTCGGGAATGAAAGAGGGAGTGGATTGTTGTCGTCGTCTTCGTCGTCACCGTCGTCGTCGTCGTCGACGAGAAGAGGGAGGAAGGGAGGTTCTGATAAGCAACCAAGGCAACCTCAAAGAGGGCTTGGAGTTGCTCAGCTTGAGAAGATCAGATTGCATGGTGAAATTGCTGCTTTTCATCCCACTTCTTACACCTTCAATAATGTAACACTTTCTCCCTTCTTTCTTTTCTTTTACTCCGACGGAGCTATGTTTAAATTGACTGAATAATTATCGATTTAATCAGGATCAAGAGGTATCGAGAGTACAGACAGGATATTCGTCGGTACCCTCGTCTACTTCTTCCTCACCCTCTTATGGCTTCCCGTCCAACGTTATGGTACGTAGTTTCGTTTGATGATTTTATAAGTTATTATTAATTGGGGTATGTTTAGATTATGAAGAGTGATTTTAATTATGTATTAATTTCTTGTGTGGTGCTGTTAGGGCAAACCCTAGAATTTGAAACAAATTTAGGATCAATTTTCTTAAACTCTAATCAATATCTAATAAAAATGGGCTCTTCAAACTCTTTTCATCATAACAATTTATTAATTTATTACTAAGAATTAAGGTTGTTAATCCACAAAATTACTTGAAAAAGTATCTGTTGATGATGGTAATTAAGTAGGTTTAAGTGATTAAGGATTGTATGTGATGGGCAATGCAGATGGGGTTTGGAGAATATGAAAGAAGAAACCTTAGAGATGGTGATTCTCAGTACAGCACAGCAGCAAGGTACTATATTCACTTAATTACATTGTTAATCAAGATATAGTTTTTACTTTACTTAATTAAATAACATTTATAGGAAGACTAAGCTGTTTATTGCTTGATTGGGGAACAGATGGGATCCAAGCAATGGTGGGATATTAGAGGCTCAGCATTTTGCACAACCAAACATGCCATGTTATCTTCAAAATCCACAAGCAGAGGTAACTATGCTGTGTTCTGAATGTTTTTTTTTATTTTGAAACGTTTTGGTCTCGTTTGATAACCATTTGATTGTTTTGTGCAGTGGACACAGACCCGAAGGAGCAAACGACAGGAGAGGAGTGGACGAATGAGTCAGAATTCAGAAGCATGTGAGAGCCAAGAACTGGACTTGGAGCTTAGACTCTCAATAATCTAG

mRNA sequence

ATGGGGAGTGGTTATTTTGGGGAACCGGGTTTCGGGAATGAAAGAGGGAGTGGATTGTTGTCGTCGTCTTCGTCGTCACCGTCGTCGTCGTCGTCGACGAGAAGAGGGAGGAAGGGAGGTTCTGATAAGCAACCAAGGCAACCTCAAAGAGGGCTTGGAGTTGCTCAGCTTGAGAAGATCAGATTGCATGGTGAAATTGCTGCTTTTCATCCCACTTCTTACACCTTCAATAATGATCAAGAGGTATCGAGAGTACAGACAGGATATTCGTCGGTACCCTCGTCTACTTCTTCCTCACCCTCTTATGGCTTCCCGTCCAACGTTATGATGGGGTTTGGAGAATATGAAAGAAGAAACCTTAGAGATGGTGATTCTCAGTACAGCACAGCAGCAAGATGGGATCCAAGCAATGGTGGGATATTAGAGGCTCAGCATTTTGCACAACCAAACATGCCATGTTATCTTCAAAATCCACAAGCAGAGTGGACACAGACCCGAAGGAGCAAACGACAGGAGAGGAGTGGACGAATGAGTCAGAATTCAGAAGCATGTGAGAGCCAAGAACTGGACTTGGAGCTTAGACTCTCAATAATCTAG

Coding sequence (CDS)

ATGGGGAGTGGTTATTTTGGGGAACCGGGTTTCGGGAATGAAAGAGGGAGTGGATTGTTGTCGTCGTCTTCGTCGTCACCGTCGTCGTCGTCGTCGACGAGAAGAGGGAGGAAGGGAGGTTCTGATAAGCAACCAAGGCAACCTCAAAGAGGGCTTGGAGTTGCTCAGCTTGAGAAGATCAGATTGCATGGTGAAATTGCTGCTTTTCATCCCACTTCTTACACCTTCAATAATGATCAAGAGGTATCGAGAGTACAGACAGGATATTCGTCGGTACCCTCGTCTACTTCTTCCTCACCCTCTTATGGCTTCCCGTCCAACGTTATGATGGGGTTTGGAGAATATGAAAGAAGAAACCTTAGAGATGGTGATTCTCAGTACAGCACAGCAGCAAGATGGGATCCAAGCAATGGTGGGATATTAGAGGCTCAGCATTTTGCACAACCAAACATGCCATGTTATCTTCAAAATCCACAAGCAGAGTGGACACAGACCCGAAGGAGCAAACGACAGGAGAGGAGTGGACGAATGAGTCAGAATTCAGAAGCATGTGAGAGCCAAGAACTGGACTTGGAGCTTAGACTCTCAATAATCTAG

Protein sequence

MGSGYFGEPGFGNERGSGLLSSSSSSPSSSSSTRRGRKGGSDKQPRQPQRGLGVAQLEKIRLHGEIAAFHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYERRNLRDGDSQYSTAARWDPSNGGILEAQHFAQPNMPCYLQNPQAEWTQTRRSKRQERSGRMSQNSEACESQELDLELRLSII

Homology

[Close]

BLAST of Cp4.1LG04g10050 vs. ExPASy Swiss-Prot
Match: Q6IDB0 (Protein SPEAR3 OS=Arabidopsis thaliana OX=3702 GN=SPEAR3 PE=1 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 3.8e-28
Identity = 100/215 (46.51%), Postives = 121/215 (56.28%), Query Frame = 0


Query: 1   MGSGYFGEPGFGNERGSGLLSSSSSSPSSSSSTRRGR-KGGSDKQPRQPQRGLGVAQLEK 60
           MGS +FG P  G        SSSS + SSSS  +RG+ K GSDK P+QPQRGLGVAQLEK
Sbjct: 1   MGSSFFGRPKMGGS------SSSSPTSSSSSPAKRGKNKNGSDK-PKQPQRGLGVAQLEK 60

Query: 61  IRLHGE--------IAAFHPTSYTFNNDQEVSRVQTGYSSVPSST------SSSP---SY 120
           IRLHGE          ++HP++Y     QE  R+Q GY S+PSS+      SSSP    Y
Sbjct: 61  IRLHGEYNCNSFNTYPSYHPSTY-----QEDVRIQGGYPSIPSSSPSFSYASSSPPPAPY 120

Query: 121 GFPSNVMMGFG--EYERRNLRDGDSQYSTAARWDPSNGGILEAQHFAQPNMPCYLQNPQA 180
           GF  N+MM     +YER  +R GDSQ   A  W+PS  GILE+QHF +PN   +      
Sbjct: 121 GFHPNMMMNANNDQYERTTIRYGDSQPHRAPSWNPSY-GILESQHFVEPNTTRHF----- 180

Query: 181 EWTQTRRSKRQERSGRMSQNSEACESQELDLELRL 196
                   +R    G   QN E  E+ ELDLELRL
Sbjct: 181 ----LHEDQRNISLGSGIQNFETSEANELDLELRL 193

[Close]

BLAST of Cp4.1LG04g10050 vs. ExPASy Swiss-Prot
Match: Q84X40 (Protein SPEAR1 OS=Arabidopsis thaliana OX=3702 GN=SPEAR1 PE=1 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.4e-27
Identity = 98/204 (48.04%), Postives = 126/204 (61.76%), Query Frame = 0


Query: 1   MGSGYFGEPGFGNERGSGLLSSSSSSPSSSSSTRRGRKGGSDKQPRQPQRGLGVAQLEKI 60
           MGS +FG P   N  GS   SSS +S SSS +TRRG+K GS+K P+QPQRGLGVAQLEKI
Sbjct: 1   MGSTFFGRP---NVVGSSPPSSSPTSSSSSPATRRGKKNGSEK-PKQPQRGLGVAQLEKI 60

Query: 61  RLHGEIA-----AFHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGF--G 120
           RLHGE++     +++P+ Y     QE  R+Q GYSS+PS   SS  YGF  N+MMG    
Sbjct: 61  RLHGEMSCNSFNSYNPSLY----PQEDVRMQGGYSSIPS--QSSAPYGFYPNMMMGVHRD 120

Query: 121 EYERRNLRDGDSQYSTAARWDPSNGGILEAQHFAQPNMPCYLQNPQAEWTQTRRSKRQER 180
           +Y+R  +            W+PS  GILE+QH  +PN+  +  N     T TRRSK    
Sbjct: 121 QYDRATM-----------SWNPSY-GILESQHSLEPNITRHFLNEDPSST-TRRSK---S 178

Query: 181 SGRMSQNSEACESQELDLELRLSI 198
            G   Q+S + E+QE+DLELRLS+
Sbjct: 181 LGSGIQHSGSSENQEVDLELRLSL 178

[Close]

BLAST of Cp4.1LG04g10050 vs. NCBI nr
Match: XP_023531219.1 (protein SPEAR1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 382 bits (980), Expect = 2.31e-133
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   MGSGYFGEPGFGNERGSGLLSSSSSSPSSSSSTRRGRKGGSDKQPRQPQRGLGVAQLEKI 60
           MGSGYFGEPGFGNERGSGLLSSSSSSPSSSSSTRRGRKGGSDKQPRQPQRGLGVAQLEKI
Sbjct: 1   MGSGYFGEPGFGNERGSGLLSSSSSSPSSSSSTRRGRKGGSDKQPRQPQRGLGVAQLEKI 60

Query: 61  RLHGEIAAFHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYERRNL 120
           RLHGEIAAFHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYERRNL
Sbjct: 61  RLHGEIAAFHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYERRNL 120

Query: 121 RDGDSQYSTAARWDPSNGGILEAQHFAQPNMPCYLQNPQAEWTQTRRSKRQERSGRMSQN 180
           RDGDSQYSTAARWDPSNGGILEAQHFAQPNMPCYLQNPQAEWTQTRRSKRQERSGRMSQN
Sbjct: 121 RDGDSQYSTAARWDPSNGGILEAQHFAQPNMPCYLQNPQAEWTQTRRSKRQERSGRMSQN 180

Query: 181 SEACESQELDLELRLSII 198
           SEACESQELDLELRLSII
Sbjct: 181 SEACESQELDLELRLSII 198

[Close]

BLAST of Cp4.1LG04g10050 vs. NCBI nr
Match: XP_022933519.1 (protein SPEAR1-like [Cucurbita moschata])

HSP 1 Score: 375 bits (963), Expect = 8.73e-131
Identity = 197/198 (99.49%), Postives = 197/198 (99.49%), Query Frame = 0


Query: 1   MGSGYFGEPGFGNERGSGLLSSSSSSPSSSSSTRRGRKGGSDKQPRQPQRGLGVAQLEKI 60
           MGSGYFGEPGFGNERGSGLLSSSSSSPSSSSS RRGRKGGSDKQPRQPQRGLGVAQLEKI
Sbjct: 1   MGSGYFGEPGFGNERGSGLLSSSSSSPSSSSS-RRGRKGGSDKQPRQPQRGLGVAQLEKI 60

Query: 61  RLHGEIAAFHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYERRNL 120
           RLHGEIAAFHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYERRNL
Sbjct: 61  RLHGEIAAFHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYERRNL 120

Query: 121 RDGDSQYSTAARWDPSNGGILEAQHFAQPNMPCYLQNPQAEWTQTRRSKRQERSGRMSQN 180
           RDGDSQYSTAARWDPSNGGILEAQHFAQPNMPCYLQNPQAEWTQTRRSKRQERSGRMSQN
Sbjct: 121 RDGDSQYSTAARWDPSNGGILEAQHFAQPNMPCYLQNPQAEWTQTRRSKRQERSGRMSQN 180

Query: 181 SEACESQELDLELRLSII 198
           SEACESQELDLELRLSII
Sbjct: 181 SEACESQELDLELRLSII 197

[Close]

BLAST of Cp4.1LG04g10050 vs. NCBI nr
Match: KAG6587980.1 (Protein SPEAR1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021872.1 Protein SPEAR1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 371 bits (953), Expect = 2.92e-129
Identity = 196/198 (98.99%), Postives = 196/198 (98.99%), Query Frame = 0


Query: 1   MGSGYFGEPGFGNERGSGLLSSSSSSPSSSSSTRRGRKGGSDKQPRQPQRGLGVAQLEKI 60
           MGSGYFGEPGFGNERGSGLLSSSSSSPSSSSS RRGRKGGSDKQPRQPQRGLGVAQLEKI
Sbjct: 1   MGSGYFGEPGFGNERGSGLLSSSSSSPSSSSS-RRGRKGGSDKQPRQPQRGLGVAQLEKI 60

Query: 61  RLHGEIAAFHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYERRNL 120
           RLHGEIAAFHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYERRNL
Sbjct: 61  RLHGEIAAFHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYERRNL 120

Query: 121 RDGDSQYSTAARWDPSNGGILEAQHFAQPNMPCYLQNPQAEWTQTRRSKRQERSGRMSQN 180
           RDGDSQYSTAARWDPSNGGILEAQHFAQPNMP YLQNPQAEWTQTRRSKRQERSGRMSQN
Sbjct: 121 RDGDSQYSTAARWDPSNGGILEAQHFAQPNMPSYLQNPQAEWTQTRRSKRQERSGRMSQN 180

Query: 181 SEACESQELDLELRLSII 198
           SEACESQELDLELRLSII
Sbjct: 181 SEACESQELDLELRLSII 197

[Close]

BLAST of Cp4.1LG04g10050 vs. NCBI nr
Match: XP_023007409.1 (protein SPEAR1-like [Cucurbita maxima])

HSP 1 Score: 364 bits (935), Expect = 1.46e-126
Identity = 191/198 (96.46%), Postives = 192/198 (96.97%), Query Frame = 0


Query: 1   MGSGYFGEPGFGNERGSGLLSSSSSSPSSSSSTRRGRKGGSDKQPRQPQRGLGVAQLEKI 60
           MGSGYFGEPGFGNERGSGLLSSSSSS    S +RRGRKGGSDKQPRQPQRGLGVAQLEKI
Sbjct: 1   MGSGYFGEPGFGNERGSGLLSSSSSS----SPSRRGRKGGSDKQPRQPQRGLGVAQLEKI 60

Query: 61  RLHGEIAAFHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYERRNL 120
           RLHGEIAAFHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYERRNL
Sbjct: 61  RLHGEIAAFHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYERRNL 120

Query: 121 RDGDSQYSTAARWDPSNGGILEAQHFAQPNMPCYLQNPQAEWTQTRRSKRQERSGRMSQN 180
           RDGDSQYSTAARWDPSNGGILEAQHFAQPNMPCYLQNPQ EWTQTRRSKRQERSGRMSQN
Sbjct: 121 RDGDSQYSTAARWDPSNGGILEAQHFAQPNMPCYLQNPQEEWTQTRRSKRQERSGRMSQN 180

Query: 181 SEACESQELDLELRLSII 198
           SEACESQELDLELRLSII
Sbjct: 181 SEACESQELDLELRLSII 194

[Close]

BLAST of Cp4.1LG04g10050 vs. NCBI nr
Match: XP_038878298.1 (protein SPEAR3-like [Benincasa hispida])

HSP 1 Score: 313 bits (801), Expect = 4.13e-106
Identity = 171/202 (84.65%), Postives = 183/202 (90.59%), Query Frame = 0


Query: 1   MGSGYFGEPGFGN-ERGSGLLSSSSSSPSSSSSTRRGRKGGSDKQPRQPQRGLGVAQLEK 60
           MGSGYFGEP  GN ERG    +SSSSSP SS   RRG+KGGSDKQPRQPQRGLGVAQLEK
Sbjct: 1   MGSGYFGEPSLGNNERGG---ASSSSSPLSS---RRGKKGGSDKQPRQPQRGLGVAQLEK 60

Query: 61  IRLHGEIAA--FHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYER 120
           IRLHGEIA+  FH TSYTF NDQEV+RVQTGY+SVPSSTSSSPSYGFPSN+MMGFGEYER
Sbjct: 61  IRLHGEIASAGFHHTSYTFTNDQEVARVQTGYASVPSSTSSSPSYGFPSNIMMGFGEYER 120

Query: 121 RNLRDGDSQYSTAARWDPSN-GGILEAQHFAQPNMPCYLQNPQAEWTQTRRSKRQERSGR 180
           RNLRDGDSQYSTAARWDP+N GGILE+QH+AQPNM CYL+NPQAEWTQ+RRSKRQERSG 
Sbjct: 121 RNLRDGDSQYSTAARWDPNNNGGILESQHYAQPNMTCYLENPQAEWTQSRRSKRQERSGN 180

Query: 181 MSQNSEACESQELDLELRLSII 198
           M QNSEACESQ+LDLELRLSII
Sbjct: 181 MGQNSEACESQDLDLELRLSII 196

[Close]

BLAST of Cp4.1LG04g10050 vs. ExPASy TrEMBL
Match: A0A6J1EZZ7 (protein SPEAR1-like OS=Cucurbita moschata OX=3662 GN=LOC111440921 PE=4 SV=1)

HSP 1 Score: 375 bits (963), Expect = 4.22e-131
Identity = 197/198 (99.49%), Postives = 197/198 (99.49%), Query Frame = 0


Query: 1   MGSGYFGEPGFGNERGSGLLSSSSSSPSSSSSTRRGRKGGSDKQPRQPQRGLGVAQLEKI 60
           MGSGYFGEPGFGNERGSGLLSSSSSSPSSSSS RRGRKGGSDKQPRQPQRGLGVAQLEKI
Sbjct: 1   MGSGYFGEPGFGNERGSGLLSSSSSSPSSSSS-RRGRKGGSDKQPRQPQRGLGVAQLEKI 60

Query: 61  RLHGEIAAFHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYERRNL 120
           RLHGEIAAFHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYERRNL
Sbjct: 61  RLHGEIAAFHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYERRNL 120

Query: 121 RDGDSQYSTAARWDPSNGGILEAQHFAQPNMPCYLQNPQAEWTQTRRSKRQERSGRMSQN 180
           RDGDSQYSTAARWDPSNGGILEAQHFAQPNMPCYLQNPQAEWTQTRRSKRQERSGRMSQN
Sbjct: 121 RDGDSQYSTAARWDPSNGGILEAQHFAQPNMPCYLQNPQAEWTQTRRSKRQERSGRMSQN 180

Query: 181 SEACESQELDLELRLSII 198
           SEACESQELDLELRLSII
Sbjct: 181 SEACESQELDLELRLSII 197

[Close]

BLAST of Cp4.1LG04g10050 vs. ExPASy TrEMBL
Match: A0A6J1L4V3 (protein SPEAR1-like OS=Cucurbita maxima OX=3661 GN=LOC111499911 PE=4 SV=1)

HSP 1 Score: 364 bits (935), Expect = 7.05e-127
Identity = 191/198 (96.46%), Postives = 192/198 (96.97%), Query Frame = 0


Query: 1   MGSGYFGEPGFGNERGSGLLSSSSSSPSSSSSTRRGRKGGSDKQPRQPQRGLGVAQLEKI 60
           MGSGYFGEPGFGNERGSGLLSSSSSS    S +RRGRKGGSDKQPRQPQRGLGVAQLEKI
Sbjct: 1   MGSGYFGEPGFGNERGSGLLSSSSSS----SPSRRGRKGGSDKQPRQPQRGLGVAQLEKI 60

Query: 61  RLHGEIAAFHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYERRNL 120
           RLHGEIAAFHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYERRNL
Sbjct: 61  RLHGEIAAFHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYERRNL 120

Query: 121 RDGDSQYSTAARWDPSNGGILEAQHFAQPNMPCYLQNPQAEWTQTRRSKRQERSGRMSQN 180
           RDGDSQYSTAARWDPSNGGILEAQHFAQPNMPCYLQNPQ EWTQTRRSKRQERSGRMSQN
Sbjct: 121 RDGDSQYSTAARWDPSNGGILEAQHFAQPNMPCYLQNPQEEWTQTRRSKRQERSGRMSQN 180

Query: 181 SEACESQELDLELRLSII 198
           SEACESQELDLELRLSII
Sbjct: 181 SEACESQELDLELRLSII 194

[Close]

BLAST of Cp4.1LG04g10050 vs. ExPASy TrEMBL
Match: A0A5A7VAB9 (Protein SPEAR1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G001280 PE=4 SV=1)

HSP 1 Score: 308 bits (789), Expect = 1.39e-104
Identity = 174/204 (85.29%), Postives = 183/204 (89.71%), Query Frame = 0


Query: 1   MGSGYFGEPGFGN--ERGSGLLSSSSSSPSSSSSTRRGRKGGSDKQPRQPQRGLGVAQLE 60
           MGSGYFGEP  GN  ERGSG  SSSSSSPSSS   RRG+KGGSDKQPRQPQRGLGVAQLE
Sbjct: 1   MGSGYFGEPSLGNNNERGSG--SSSSSSPSSS---RRGKKGGSDKQPRQPQRGLGVAQLE 60

Query: 61  KIRLHGEIAA--FHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYE 120
           KIRLHGEIA+  FHPTSY F NDQE++RVQTGY+SVPSSTSSSPSYGFPSNVMMGFGEYE
Sbjct: 61  KIRLHGEIASAGFHPTSYAFTNDQEIARVQTGYASVPSSTSSSPSYGFPSNVMMGFGEYE 120

Query: 121 RRNLRDGDSQYSTAARWDPSN-GGILEAQHFAQPNMPCYLQNPQAE-WTQTRRSKRQERS 180
           RR+LRDGDSQYST  RWDPSN GGILE+QHFAQPNM CYLQNPQA+ WTQ+RRSKRQERS
Sbjct: 121 RRSLRDGDSQYST--RWDPSNNGGILESQHFAQPNMTCYLQNPQADQWTQSRRSKRQERS 180

Query: 181 GRMSQNSEACESQELDLELRLSII 198
           G M QNSE CESQELDLELRLSII
Sbjct: 181 GNMGQNSEGCESQELDLELRLSII 197

[Close]

BLAST of Cp4.1LG04g10050 vs. ExPASy TrEMBL
Match: A0A1S3CHQ6 (protein SPEAR1-like OS=Cucumis melo OX=3656 GN=LOC103501036 PE=4 SV=1)

HSP 1 Score: 308 bits (789), Expect = 1.39e-104
Identity = 174/204 (85.29%), Postives = 183/204 (89.71%), Query Frame = 0


Query: 1   MGSGYFGEPGFGN--ERGSGLLSSSSSSPSSSSSTRRGRKGGSDKQPRQPQRGLGVAQLE 60
           MGSGYFGEP  GN  ERGSG  SSSSSSPSSS   RRG+KGGSDKQPRQPQRGLGVAQLE
Sbjct: 1   MGSGYFGEPSLGNNNERGSG--SSSSSSPSSS---RRGKKGGSDKQPRQPQRGLGVAQLE 60

Query: 61  KIRLHGEIAA--FHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYE 120
           KIRLHGEIA+  FHPTSY F NDQE++RVQTGY+SVPSSTSSSPSYGFPSNVMMGFGEYE
Sbjct: 61  KIRLHGEIASAGFHPTSYAFTNDQEIARVQTGYASVPSSTSSSPSYGFPSNVMMGFGEYE 120

Query: 121 RRNLRDGDSQYSTAARWDPSN-GGILEAQHFAQPNMPCYLQNPQAE-WTQTRRSKRQERS 180
           RR+LRDGDSQYST  RWDPSN GGILE+QHFAQPNM CYLQNPQA+ WTQ+RRSKRQERS
Sbjct: 121 RRSLRDGDSQYST--RWDPSNNGGILESQHFAQPNMTCYLQNPQADQWTQSRRSKRQERS 180

Query: 181 GRMSQNSEACESQELDLELRLSII 198
           G M QNSE CESQELDLELRLSII
Sbjct: 181 GNMGQNSEGCESQELDLELRLSII 197

[Close]

BLAST of Cp4.1LG04g10050 vs. ExPASy TrEMBL
Match: A0A0A0LW93 (SPOROCYTELESS-like EAR-containing protein 3 OS=Cucumis sativus OX=3659 GN=SPEAR3 PE=2 SV=1)

HSP 1 Score: 308 bits (788), Expect = 1.91e-104
Identity = 169/202 (83.66%), Postives = 177/202 (87.62%), Query Frame = 0


Query: 1   MGSGYFGEPGFGNERGSGLLSSSSSSPSSSSSTRRGRKGGSDKQPRQPQRGLGVAQLEKI 60
           MGSGYFGEP  GN    G  SSSSSSPSS    RRG+KGGSDKQPRQPQRGLGVAQLEKI
Sbjct: 1   MGSGYFGEPSLGNNNDRGSGSSSSSSPSS----RRGKKGGSDKQPRQPQRGLGVAQLEKI 60

Query: 61  RLHGEIAA--FHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYERR 120
           RLHGEIA+  FHPTSYTF NDQE++RVQTGY SVPSSTSSSPSYGFPSN+MMGFGEYERR
Sbjct: 61  RLHGEIASAGFHPTSYTFTNDQEIARVQTGYGSVPSSTSSSPSYGFPSNIMMGFGEYERR 120

Query: 121 NLRDGDSQYSTAARWDPSN-GGILEAQHFAQPNMPCYLQNPQAE-WTQTRRSKRQERSGR 180
           NLRDGDSQYST  RWDPSN GGILE+QHFAQPNM CYLQNPQA+ WTQ+RRSKRQERSG 
Sbjct: 121 NLRDGDSQYST--RWDPSNNGGILESQHFAQPNMTCYLQNPQADQWTQSRRSKRQERSGN 180

Query: 181 MSQNSEACESQELDLELRLSII 198
           M QN E CESQELDLELRLSII
Sbjct: 181 MGQNPEGCESQELDLELRLSII 196

[Close]

BLAST of Cp4.1LG04g10050 vs. TAIR 10
Match: AT4G28840.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G20080.1); Has 71 Blast hits to 69 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 126.3 bits (316), Expect = 2.7e-29
Identity = 100/215 (46.51%), Postives = 121/215 (56.28%), Query Frame = 0


Query: 1   MGSGYFGEPGFGNERGSGLLSSSSSSPSSSSSTRRGR-KGGSDKQPRQPQRGLGVAQLEK 60
           MGS +FG P  G        SSSS + SSSS  +RG+ K GSDK P+QPQRGLGVAQLEK
Sbjct: 1   MGSSFFGRPKMGGS------SSSSPTSSSSSPAKRGKNKNGSDK-PKQPQRGLGVAQLEK 60

Query: 61  IRLHGE--------IAAFHPTSYTFNNDQEVSRVQTGYSSVPSST------SSSP---SY 120
           IRLHGE          ++HP++Y     QE  R+Q GY S+PSS+      SSSP    Y
Sbjct: 61  IRLHGEYNCNSFNTYPSYHPSTY-----QEDVRIQGGYPSIPSSSPSFSYASSSPPPAPY 120

Query: 121 GFPSNVMMGFG--EYERRNLRDGDSQYSTAARWDPSNGGILEAQHFAQPNMPCYLQNPQA 180
           GF  N+MM     +YER  +R GDSQ   A  W+PS  GILE+QHF +PN   +      
Sbjct: 121 GFHPNMMMNANNDQYERTTIRYGDSQPHRAPSWNPSY-GILESQHFVEPNTTRHF----- 180

Query: 181 EWTQTRRSKRQERSGRMSQNSEACESQELDLELRL 196
                   +R    G   QN E  E+ ELDLELRL
Sbjct: 181 ----LHEDQRNISLGSGIQNFETSEANELDLELRL 193

[Close]

BLAST of Cp4.1LG04g10050 vs. TAIR 10
Match: AT2G20080.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28840.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 123.6 bits (309), Expect = 1.7e-28
Identity = 98/204 (48.04%), Postives = 126/204 (61.76%), Query Frame = 0


Query: 1   MGSGYFGEPGFGNERGSGLLSSSSSSPSSSSSTRRGRKGGSDKQPRQPQRGLGVAQLEKI 60
           MGS +FG P   N  GS   SSS +S SSS +TRRG+K GS+K P+QPQRGLGVAQLEKI
Sbjct: 1   MGSTFFGRP---NVVGSSPPSSSPTSSSSSPATRRGKKNGSEK-PKQPQRGLGVAQLEKI 60

Query: 61  RLHGEIA-----AFHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGF--G 120
           RLHGE++     +++P+ Y     QE  R+Q GYSS+PS   SS  YGF  N+MMG    
Sbjct: 61  RLHGEMSCNSFNSYNPSLY----PQEDVRMQGGYSSIPS--QSSAPYGFYPNMMMGVHRD 120

Query: 121 EYERRNLRDGDSQYSTAARWDPSNGGILEAQHFAQPNMPCYLQNPQAEWTQTRRSKRQER 180
           +Y+R  +            W+PS  GILE+QH  +PN+  +  N     T TRRSK    
Sbjct: 121 QYDRATM-----------SWNPSY-GILESQHSLEPNITRHFLNEDPSST-TRRSK---S 178

Query: 181 SGRMSQNSEACESQELDLELRLSI 198
            G   Q+S + E+QE+DLELRLS+
Sbjct: 181 LGSGIQHSGSSENQEVDLELRLSL 178

[Close]

BLAST of Cp4.1LG04g10050 vs. TAIR 10
Match: AT2G20080.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28840.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 90.5 bits (223), Expect = 1.6e-18
Identity = 82/197 (41.62%), Postives = 105/197 (53.30%), Query Frame = 0


Query: 1   MGSGYFGEPGFGNERGSGLLSSSSSSPSSSSSTRRGRKGGSDKQPRQPQRGLGVAQLEKI 60
           MGS +FG P   N  GS   SSS +S SSS +TRRG+K GS+K P+QPQRGLGVAQLEKI
Sbjct: 1   MGSTFFGRP---NVVGSSPPSSSPTSSSSSPATRRGKKNGSEK-PKQPQRGLGVAQLEKI 60

Query: 61  RLHGEIAAFHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYERRNL 120
           RLHGE++     SY                    + S  P  G   +      +Y+R  +
Sbjct: 61  RLHGEMSCNSFNSY--------------------NPSLYPQMGVHRD------QYDRATM 120

Query: 121 RDGDSQYSTAARWDPSNGGILEAQHFAQPNMPCYLQNPQAEWTQTRRSKRQERSGRMSQN 180
                       W+PS  GILE+QH  +PN+  +  N     T TRRSK     G   Q+
Sbjct: 121 -----------SWNPSY-GILESQHSLEPNITRHFLNEDPSST-TRRSK---SLGSGIQH 151

Query: 181 SEACESQELDLELRLSI 198
           S + E+QE+DLELRLS+
Sbjct: 181 SGSSENQEVDLELRLSL 151

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g10050 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6IDB0	3.8e-28	46.51	Protein SPEAR3 OS=Arabidopsis thaliana OX=3702 GN=SPEAR3 PE=1 SV=1	[more]
Q84X40	2.4e-27	48.04	Protein SPEAR1 OS=Arabidopsis thaliana OX=3702 GN=SPEAR1 PE=1 SV=1	[more]

BLAST of Cp4.1LG04g10050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023531219.1	2.31e-133	100.00	protein SPEAR1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022933519.1	8.73e-131	99.49	protein SPEAR1-like [Cucurbita moschata]	[more]
KAG6587980.1	2.92e-129	98.99	Protein SPEAR1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021872.1 Pr...	[more]
XP_023007409.1	1.46e-126	96.46	protein SPEAR1-like [Cucurbita maxima]	[more]
XP_038878298.1	4.13e-106	84.65	protein SPEAR3-like [Benincasa hispida]	[more]

BLAST of Cp4.1LG04g10050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EZZ7	4.22e-131	99.49	protein SPEAR1-like OS=Cucurbita moschata OX=3662 GN=LOC111440921 PE=4 SV=1	[more]
A0A6J1L4V3	7.05e-127	96.46	protein SPEAR1-like OS=Cucurbita maxima OX=3661 GN=LOC111499911 PE=4 SV=1	[more]
A0A5A7VAB9	1.39e-104	85.29	Protein SPEAR1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G0...	[more]
A0A1S3CHQ6	1.39e-104	85.29	protein SPEAR1-like OS=Cucumis melo OX=3656 GN=LOC103501036 PE=4 SV=1	[more]
A0A0A0LW93	1.91e-104	83.66	SPOROCYTELESS-like EAR-containing protein 3 OS=Cucumis sativus OX=3659 GN=SPEAR3...	[more]

BLAST of Cp4.1LG04g10050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28840.1	2.7e-29	46.51	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G20080.1	1.7e-28	48.04	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G20080.2	1.6e-18	41.62	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..35
None	No IPR available	PANTHER	PTHR33388:SF18	PROTEIN SPEAR1	coord: 1..197
IPR040356	SPEAR family	PANTHER	PTHR33388	OS01G0212500 PROTEIN	coord: 1..197

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g10050.1	Cp4.1LG04g10050.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity