Cp4.1LG04g09700 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG04g09700
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionUnknown protein
LocationCp4.1LG04: 9976175 .. 9981483 (+)
RNA-Seq ExpressionCp4.1LG04g09700
SyntenyCp4.1LG04g09700
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATAGGTCTTCAAGCACGTCGCGAAACTTCGACGAGTACTCGGTCGACATGCCACCGGGTTTCACCAGCTCCCCACCATTCAAGAATGAAGCTCCTGATCTGTTGCCACTGTTCAAGATTGATACCCCCAAGAAAGAAATGGGGCCACATTTTAAACCTCCTGGGCAAAATGCAGTTCATCTCATTCCTCTCATTCTGCTTCTCTCTGCTTTAATCCTCTGGATTTGTTCATCCAGGTAAATTTTGAGTGCACATCCATAATGTAACTCATTACTGCTTTATGATTGTTGGTTCAAATAAAACTGCACTCATTCTTTAAGAATGAAAACTGAAACGTGTATGATACGAGGAGTTGTTGGCTTGAAAGCAACAGATACAAAAGGCATAGCAATATGTATGAAGTTTATAACAGATTTAGGAGAATATTGTTTGAAAAGAGGCAAAGTTGGGTTGATTATGATCTATGAAATTGGTAGATCAGGGAGAGAGATTAACGTGTTTCTCAAGGTAATTTCAAGCTTTAAACGCACACATCTCCAAACTTTGCCCTCTCAACAACACCTCATTTGCTTTCACCCTACTCAACCTCCACATTACACAACTACTTGCTTCACTCAATCTACTTTCGGTATTTTTGTAATACCGCAAGTCTACCGTTGATAGATATTGCCTCACGGTTTTAAAATGAGTCTACTAGAAAAAGGTTTCAACATCCTTCTAAAAAATATCACAATTCACCCCTTTCAAGGCCCAGCGTCCTCCCTGATACACTGTTCGGTGTTCACCTCCCTTCAGGGTCGAGCATCCTCGCTAGTACATCGTCCGGTGTTCATCTCCCTTCGGAGCTCAACGTCTCCGTTGGCACACTGCCCAATGTCTACCTCCCTTCGAGGTCTAGTGTCCTTGCTAGCACACCGCCCGTTGTCCACCCCCTTTGAGAATCGATGTCCTTGTTGGCACATCATTCGGTATCTGGATCTAATACCATTTGTACAACTATGAACAAATTTTTTTTATGAAAAAGAGAATAAAAAAAAAAAAAAGCAAGTCTATAGTAAAAGTTGTTGAGTATGACTGTCATAATAGTTAGCATATTTTAGACCTGTTCTTTAGAAAGACAAAGACAAATCTTAAAAAGATTGAAAAAGGGAAAGAAAGTAGAGAATGGATAACAATAATATTACTGATGTGAGCTTCAAACTTACACACCCATTCACAACACCCAACATGTTAAGCCTTCTCATTCAAGTCTAACAATATTCCAATCGTTTTATTCTCTAGTAACACACGATCAAATACAATATTGATATTATAAAATTTGACCCTAAGATAATTCATATTAAACAAATAGATCGTATTAATATACTCAATAAAATGAGTATCTAAATGATTATAAACAATTTATAACAAGAATTTCATAAAATTTAAAGGAATTGATAATAAATATTATGATTTGGTGGCCAAACCTACCCAATTGTTAAGCATTTGCCTAGATGTTTGGTATATGATTTGTGGAATGAAATTTGGTTGTATAAAACATGGAAAGTTTTCATTTTTTTCCTCCACATCTCATTGCATAAATTCCATTTTAATTTGACCTAAAAATTAATTTAATCCATTTTCCTGAAGAACTTAATTAAAACCCAGAAATTTCAATTGGGTATAGTGCTTGCTTTGAAGAAGAGAATGATGAACAGGCAATTTCCAACTCAACAAGCTATTCTTGGGCTGTTTGTTGGCAAGTTGAGCATAAAAACCATACCATTATTCTTTGTTTATTTATTAAGTTTTATTTATTTATTTATTTATAAATAAATATTTGATTTCCATTCTTTTTCTGGGCCTTCTTAGTATGGCCTAAAAATTAAAAGCAAATCACGCTTAATTATCCAATATAAGGACCGACACAAAATAGAAGCACAAATTAGATGGAAAGAAAGAGGGTTGTGACGATCCTGGGATAACAATTTTCTCGCTGCATTTCAAAAGGGTCAGTGAAATTCGTTTCCTTTTGCTTCCTTCAATTCCATCTTCTTTTCGCTTCAATCTATGTTTCCATTTTCAGCACTTCCTTAAATCTTGATGCTCATAATTTTCTTTCCTTCATTCTTTTTCTTGTTTTTGGGGGCTATTCGTTTCTCAGGATGGTGTTTGGTTGCTCAGAAATCGATAATAGACTAATCAGTTTCATGAACTTGTTTTGATGAATATTTTGTGTTTTTATGGCATGATCGAGGAGAACTATTCAAGATTTTGTTCATTTTTCCTTCTCTTTCCCTCTTTCCAGCGAGCAGCCTTACTGAAATTAGTTTGTGTGTTCTTTCATTACATTTTCTGATGAATCGTAAGGGCACTTTTGGCTATGAATTTTCTTTTGATTTGCTTTTATTTGTTCTGCAGCATGGTTTTATGAACAGTATCGATGATGGTGCTGCTTGATGTCTGATATTTTAGCGATTACAAACGGCATTAGTATAAGCAAACACACAAAGAAAACGAAAAAAAAAGAAAGAAATCGAATCGGAGGCTGTTTCGTGTTGCTTTCGATTGGATCAAGACCTGAAAAGACTAAGCTATTTATAATTTTGACATTCCAATGGTAGAATTATAGATGATAAATGGCTTAAACATTTGGGATACTCTCCTTTTCTGTTGATCTTTTATTCCATTTCTCTTTTCATTTACTTTTTGCAGAGTGAGTATGTTTATAAAAACTATAAGTCTTGGAGAAAGAGTTTTAGTTTTCATTCTCATAGTTTTGGACCCTCCTATATTGAATTTTTGAGTGATGGGTAGTCTTTGTACAATTTTTCAGATATTATAAATTTCCGTCCTTTAATCTCGAATGATGTCATTTTAGCTTCAACTCGTGTTTTCTTTAACTCTGATAACAGATTTCGATTAGTAATTTGGGCTACACATCATGAAATTCAAAAACGGGAGTAAGCTGAAAATATTGAGCAAAAAGAAGGTGCCTTTAGGACCACAATGTTCTATGGAAGCGATAAGAAGCAACGGCGCCAACTATATAGTTAGACATGTTAAGTCCAAGGGTGGCAGCAACCATGCTATGGTGGAGCAGGTGTCTCAAAAGGTCATCGTACCCTGCCACACTCGTTTAGATGTTAAAGGGGCTTGGGCTCCTGGTGATGTTGTAGAGGTGTTTGATAACAACTCATGGAAAATTGCCACAATCTCAGAGGTTTTGGGAAAAATGCACATTCTTGTCAGATTACTTGGATCCTCTCAGGAGTTTAAAGTCAGAAAAACCAATATCCGGGTTCGACAGGCATGGGAAGATGATGATGGTGCAAGGGTTATGGTTGGAAAGGTAATATCATCCATCTACCTTTTCTCCACAGTATTACTTTTTGTTCTATTAGGGGTATTAAATTGTAAAACTTATCATATATGGTGAGGAGCTTGTGTCATGATGTCGTTGTTGAGTTCATCGTGTTGCTGAATGAGTATGCACTAATGTCTTTCGGCAACATTCACATTTATGTCTTACTTAGGAGTCATGAACTTGCATTAGCCTTTAGATTATACATTTTAATATACGAAAAAAAAAAAACATCAAAGCAATTTTCTTATCATATTTTCTTGCAGTTTTCATGTGTTGATAACATTATAAGTGAAGAAGTGAATTTTTTTTCTCGCAGGGAAACCAAAATTCTAATGGAGGGAAGCTCCATGCCAATCAACTTTTGAACCACAATCAAAATTCAACCTCTCAAGTTCAGAAGACAAACTCAAGGACCACTCTGTGGAAAAAAGATGACGGTTTTGCTGTTAGGAACAAAAGAATTCAAGATGGCTACAATGTTGGAATTCTGAAGAGATCAACAGATTGCTCGTCTGGAGCATTTTATGGAGCGAGCCATAAAGTTAGATTGATTGAGAAAGACGGGCGATATGTTAAGGTGGTTGCTGCAAATCCAACGAAGTTACCTGAATTGCAGGTAGGTCCTGTTTCATATCTTAGAGATTATCTGGGTGAAAGACATAGGCCTGAATCTCTGAATCGCAGACATGGTGGGCATTTGAAACTGGATGTCAAGGGTAAAGAACCAGTTAGTCCGGTTCGAGAACTAAACGATGGAGATAGCATTATGTGCTCTGTTGGTAGTTGCAGCATCAGTAGTGACAACTCAAGTGAGATGCCTTGTGATGTGTCCACTGCTGTGACTGAACAAATTGCTTGTCACTTCCCTGATGATCGATCACCTCATCATTCGGGATATGAAGGCCACTGCCTTCCTACCAAAGAAGAATTGTCTGCTGAAATTCATAGGTTAGAGTTACATGCCTACCGTTGCACTATCGAGGCATTGCATGCATCAGGACCTTTGAGTTGGGAACAAGAAGTATTGATCACAAATCTTCGGCTTTCACTTAACATATCGAATGATGAACATTTAATGCAGATAAAATATTTAATCTCTGCAGATACCAGAATTCCTATTAAATGATTGAGAAATAATTCTTTTGCTTCTCTTTCATATATATGCTCCACCTCTGTTCTCATAGTGATTACTTCTCTTATGTTTTTACAGTACCCATTTCTGATATAAACTGAATGTACAACTTAGCCGACAATTGAATCATTTTAAGCTCATTAGTCCAAGTCGAGTTTTATGGCGTCATGGATTCATTTTTGCAATTGTATGATGAAAACGTTGCTATAGAATGTTGATCTTCTCAACCATTTGGAAACAACTGAGATATGCTCAGAATAAGAACATTGTCATTCTGTGACTTAGTTTCGAAAAATATGTAGTCATCTTGTAGACAGAGATTGTTGTCTGGAAACAATTTGACACTGTGAGCTATGTTAATTAGAACTGTTTGTGATGACTGAGCCAATGTTTTCATTACATGGCTCCTCACTACATTTCTCCATTTCAGGGTGGTTAAGATCAAGACTGGCGTTGTCTTCTTCTCGATGCCAAGCGATGGCGAATGCCGGGGAGGTTATACTTTAAACCTTTCTGCGGTGCTGTATATCCAACTTGGTACTCGAATTCAACTGCATAGCCACCACACCACAGACAACAAATATTTGGCTTCACATGTTAAACTTGGTAATGTAATTCACTTGACCATGTCACTGATACATCGTATTCAACCATTTGTTTTGAAATTCTTTTACTGTTGGATATTGTTATTACCTGGGATTTGTTTTAGAGTGTACTTTGTTTTTATGGTTTTTTTCCTGCTGAAAACAGCATCTAAACCAGAGGCCTTAGCTTTTTAAGAGGTTCGCCATACTAGAGGTCCCATCTCTAACAGCAGCTGAGATTCAA

mRNA sequence

ATGCATAGGTCTTCAAGCACGTCGCGAAACTTCGACGAGTACTCGGTCGACATGCCACCGGGTTTCACCAGCTCCCCACCATTCAAGAATGAAGCTCCTGATCTGTTGCCACTGTTCAAGATTGATACCCCCAAGAAAGAAATGGGGCCACATTTTAAACCTCCTGGGCAAAATGCAGTTCATCTCATTCCTCTCATTCTGCTTCTCTCTGCTTTAATCCTCTGGATTTGTTCATCCAGATCAGGGAGAGAGATTAACGTGTTTCTCAAGCATGGTTTTATGAACAGTATCGATGATGGTGCTGCTTGATGTCTGATATTTTAGCGATTACAAACGGCATTAGTATAAGCAAACACACAAAGAAAACGAAAAAAAAAGAAAGAAATCGAATCGGAGGCTGTTTCGTGTTGCTTTCGATTGGATCAAGACCTGAAAAGACTAAGCTATTTATAATTTTGACATTCCAATGGTAGAATTATAGATGATAAATGGCTTAAACATTTGGGATACTCTCCTTTTCTGTTGATCTTTTATTCCATTTCTCTTTTCATTTACTTTTTGCAGAGTGAGTATGTTTATAAAAACTATAAGTCTTGGAGAAAGAGTTTTAGTTTTCATTCTCATAGTTTTGGACCCTCCTATATTGAATTTTTGAGTGATGGGTAGTCTTTGTACAATTTTTCAGATATTATAAATTTCCGTCCTTTAATCTCGAATGATGTCATTTTAGCTTCAACTCGTGTTTTCTTTAACTCTGATAACAGATTTCGATTAGTAATTTGGGCTACACATCATGAAATTCAAAAACGGGAGTAAGCTGAAAATATTGAGCAAAAAGAAGGTGCCTTTAGGACCACAATGTTCTATGGAAGCGATAAGAAGCAACGGCGCCAACTATATAGTTAGACATGTTAAGTCCAAGGGTGGCAGCAACCATGCTATGGTGGAGCAGGTGTCTCAAAAGGTCATCGTACCCTGCCACACTCGTTTAGATGTTAAAGGGGCTTGGGCTCCTGGTGATGTTGTAGAGGTGTTTGATAACAACTCATGGAAAATTGCCACAATCTCAGAGGTTTTGGGAAAAATGCACATTCTTGTCAGATTACTTGGATCCTCTCAGGAGTTTAAAGTCAGAAAAACCAATATCCGGGTTCGACAGGCATGGGAAGATGATGATGGTGCAAGGGTTATGGTTGGAAAGGGAAACCAAAATTCTAATGGAGGGAAGCTCCATGCCAATCAACTTTTGAACCACAATCAAAATTCAACCTCTCAAGTTCAGAAGACAAACTCAAGGACCACTCTGTGGAAAAAAGATGACGGTTTTGCTGTTAGGAACAAAAGAATTCAAGATGGCTACAATGTTGGAATTCTGAAGAGATCAACAGATTGCTCGTCTGGAGCATTTTATGGAGCGAGCCATAAAGTTAGATTGATTGAGAAAGACGGGCGATATGTTAAGGTGGTTGCTGCAAATCCAACGAAGTTACCTGAATTGCAGACATGGTGGGCATTTGAAACTGGATGTCAAGGGTAAAGAACCAGTTAGTCCGGTTCGAGAACTAAACGATGGAGATAGCATTATGTGCTCTGTTGGTAGTTGCAGCATCAGTAGTGACAACTCAAGTGAGATGCCTTGTGATGTGTCCACTGCTGTGACTGAACAAATTGCTTGTCACTTCCCTGATGATCGATCACCTCATCATTCGGGATATGAAGGCCACTGCCTTCCTACCAAAGAAGAATTGTCTGCTGAAATTCATAGGTTAGAGTTACATGCCTACCGTTGCACTATCGAGGCATTGCATGCATCAGGACCTTTGAGTTGGGAACAAGAAGGTGGTTAAGATCAAGACTGGCGTTGTCTTCTTCTCGATGCCAAGCGATGGCGAATGCCGGGGAGGTTATACTTTAAACCTTTCTGCGGTGCTGTATATCCAACTTGGTACTCGAATTCAACTGCATAGCCACCACACCACAGACAACAAATATTTGGCTTCACATGTTAAACTTGGTAATGTAATTCACTTGACCATGTCACTGATACATCGTATTCAACCATTTGTTTTGAAATTCTTTTACTGTTGGATATTGTTATTACCTGGGATTTGTTTTAGAGTGTACTTTGTTTTTATGGTTTTTTTCCTGCTGAAAACAGCATCTAAACCAGAGGCCTTAGCTTTTTAAGAGGTTCGCCATACTAGAGGTCCCATCTCTAACAGCAGCTGAGATTCAA

Coding sequence (CDS)

ATGCATAGGTCTTCAAGCACGTCGCGAAACTTCGACGAGTACTCGGTCGACATGCCACCGGGTTTCACCAGCTCCCCACCATTCAAGAATGAAGCTCCTGATCTGTTGCCACTGTTCAAGATTGATACCCCCAAGAAAGAAATGGGGCCACATTTTAAACCTCCTGGGCAAAATGCAGTTCATCTCATTCCTCTCATTCTGCTTCTCTCTGCTTTAATCCTCTGGATTTGTTCATCCAGATCAGGGAGAGAGATTAACGTGTTTCTCAAGCATGGTTTTATGAACAGTATCGATGATGGTGCTGCTTGA

Protein sequence

MHRSSSTSRNFDEYSVDMPPGFTSSPPFKNEAPDLLPLFKIDTPKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSSRSGREINVFLKHGFMNSIDDGAA
Homology
[Close]
BLAST of Cp4.1LG04g09700 vs. NCBI nr
Match: KAG7021797.1 (hypothetical protein SDJN02_15525, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 201 bits (512), Expect = 4.21e-65
Identity = 100/103 (97.09%), Postives = 100/103 (97.09%), Query Frame = 0 

Query: 1   MHRSSSTSRNFDEYSVDMPPGFTSSPPFKNEAPD-LLPLFKIDTPKKEMGPHFKPPGQNA 60
           MHRSSSTSRNFDEYSVDMPPGFTSSPP KNEAPD LLPLFKIDTPKKEMGPHFKPPGQNA
Sbjct: 1   MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDDLLPLFKIDTPKKEMGPHFKPPGQNA 60

Query: 61  VHLIPLILLLSALILWICSSRSGREINVFLKHGFMNSIDDGAA 102
           VHLIPLILLLSALILWICSSRSGREINVFLKH FMNSIDDGAA
Sbjct: 61  VHLIPLILLLSALILWICSSRSGREINVFLKHDFMNSIDDGAA 103

[Close]
BLAST of Cp4.1LG04g09700 vs. NCBI nr
Match: KAG6587911.1 (hypothetical protein SDJN03_16476, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 159 bits (403), Expect = 1.62e-48
Identity = 79/81 (97.53%), Postives = 79/81 (97.53%), Query Frame = 0 

Query: 1  MHRSSSTSRNFDEYSVDMPPGFTSSPPFKNEAPD-LLPLFKIDTPKKEMGPHFKPPGQNA 60
          MHRSSSTSRNFDEYSVDMPPGFTSSPP KNEAPD LLPLFKIDTPKKEMGPHFKPPGQNA
Sbjct: 1  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDDLLPLFKIDTPKKEMGPHFKPPGQNA 60

Query: 61 VHLIPLILLLSALILWICSSR 80
          VHLIPLILLLSALILWICSSR
Sbjct: 61 VHLIPLILLLSALILWICSSR 81

[Close]
BLAST of Cp4.1LG04g09700 vs. NCBI nr
Match: KAA0046741.1 (hypothetical protein E6C27_scaffold216G00220 [Cucumis melo var. makuwa] >TYK14518.1 hypothetical protein E5676_scaffold15G00330 [Cucumis melo var. makuwa])

HSP 1 Score: 105 bits (263), Expect = 2.00e-27
Identity = 55/81 (67.90%), Postives = 64/81 (79.01%), Query Frame = 0 

Query: 1  MHRSSSTSRNFDEYSVDMPPGFTSSPPFKNEAPDLLPLFKIDTP-KKEMGPHFKPPGQNA 60
          M+RSSSTSR+FDE+SVD+ P   SSPP KNEA  +LPLFK ++  KKEMG  FK PG NA
Sbjct: 1  MYRSSSTSRSFDEFSVDLLPDSISSPPLKNEASSVLPLFKSNSDAKKEMGLQFKSPGVNA 60

Query: 61 VHLIPLILLLSALILWICSSR 80
          VHLIPL L L ALILW+CS+R
Sbjct: 61 VHLIPLTLFLCALILWVCSTR 81

[Close]
BLAST of Cp4.1LG04g09700 vs. NCBI nr
Match: KAE8653076.1 (hypothetical protein Csa_019861 [Cucumis sativus])

HSP 1 Score: 103 bits (257), Expect = 3.53e-26
Identity = 53/80 (66.25%), Postives = 64/80 (80.00%), Query Frame = 0 

Query: 1  MHRSSSTSRNFDEYSVDMPPGFTSSPPFKNEAPDLLPLFKIDTP-KKEMGPHFKPPGQNA 60
          M+RSSSTSR+F+E+SVD+ P   SSPP KNEA  +LPLFK ++  KKEMG  FK PG+NA
Sbjct: 1  MYRSSSTSRSFNEFSVDLLPDSISSPPLKNEASGVLPLFKSNSDAKKEMGSQFKSPGENA 60

Query: 61 VHLIPLILLLSALILWICSS 79
          VHLIPL L L ALILW+CS+
Sbjct: 61 VHLIPLTLFLCALILWVCST 80

[Close]
BLAST of Cp4.1LG04g09700 vs. NCBI nr
Match: XP_030474027.1 (uncharacterized protein LOC115691521 [Syzygium oleosum])

HSP 1 Score: 78.6 bits (192), Expect = 1.01e-15
Identity = 42/81 (51.85%), Postives = 55/81 (67.90%), Query Frame = 0 

Query: 1   MHRSSSTSRNFDEYSVDMPPGFTSSPPFKNEAPDLLPLFK---IDTPKKEMGPHFKPPGQ 60
           M R SS SR+FDE+ V++ P  T+    +N + + LPLF+    D+ KKE G H K PG+
Sbjct: 83  MQRLSSGSRDFDEFLVNLLPASTAFSSLRNSSANDLPLFRHPSSDSAKKESGAHRKSPGE 142

Query: 61  NAVHLIPLILLLSALILWICS 78
            AVHLIPL+LLL AL LW+CS
Sbjct: 143 KAVHLIPLVLLLCALTLWLCS 163

[Close]
BLAST of Cp4.1LG04g09700 vs. ExPASy TrEMBL
Match: A0A5A7TZH0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold15G00330 PE=4 SV=1)

HSP 1 Score: 105 bits (263), Expect = 9.67e-28
Identity = 55/81 (67.90%), Postives = 64/81 (79.01%), Query Frame = 0 

Query: 1  MHRSSSTSRNFDEYSVDMPPGFTSSPPFKNEAPDLLPLFKIDTP-KKEMGPHFKPPGQNA 60
          M+RSSSTSR+FDE+SVD+ P   SSPP KNEA  +LPLFK ++  KKEMG  FK PG NA
Sbjct: 1  MYRSSSTSRSFDEFSVDLLPDSISSPPLKNEASSVLPLFKSNSDAKKEMGLQFKSPGVNA 60

Query: 61 VHLIPLILLLSALILWICSSR 80
          VHLIPL L L ALILW+CS+R
Sbjct: 61 VHLIPLTLFLCALILWVCSTR 81

[Close]
BLAST of Cp4.1LG04g09700 vs. ExPASy TrEMBL
Match: A0A0A0LTP3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G305730 PE=4 SV=1)

HSP 1 Score: 105 bits (263), Expect = 9.67e-28
Identity = 54/81 (66.67%), Postives = 65/81 (80.25%), Query Frame = 0 

Query: 1  MHRSSSTSRNFDEYSVDMPPGFTSSPPFKNEAPDLLPLFKIDTP-KKEMGPHFKPPGQNA 60
          M+RSSSTSR+F+E+SVD+ P   SSPP KNEA  +LPLFK ++  KKEMG  FK PG+NA
Sbjct: 1  MYRSSSTSRSFNEFSVDLLPDSISSPPLKNEASGVLPLFKSNSDAKKEMGSQFKSPGENA 60

Query: 61 VHLIPLILLLSALILWICSSR 80
          VHLIPL L L ALILW+CS+R
Sbjct: 61 VHLIPLTLFLCALILWVCSTR 81

[Close]
BLAST of Cp4.1LG04g09700 vs. ExPASy TrEMBL
Match: A0A438EIF2 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_086512 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.69e-15
Identity = 40/80 (50.00%), Postives = 53/80 (66.25%), Query Frame = 0 

Query: 1  MHRSSSTSRNFDEYSVDMPPGFTSSPPFKNEAPDLLPLFK--IDTPKKEMGPHFKPPGQN 60
          M+RS+STSR  DE+ V++ P    S P K  A + LP++    D  KKEM  H K  G+N
Sbjct: 1  MYRSASTSRASDEFLVNLLPAAMGSTPLKTSASEDLPMYDPISDATKKEMSMHHKSSGEN 60

Query: 61 AVHLIPLILLLSALILWICS 78
          A+HLIPL+L+L ALILW+ S
Sbjct: 61 AIHLIPLLLILCALILWVFS 80

[Close]
BLAST of Cp4.1LG04g09700 vs. ExPASy TrEMBL
Match: A0A059CNE3 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_C01116 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 1.17e-14
Identity = 37/81 (45.68%), Postives = 52/81 (64.20%), Query Frame = 0 

Query: 1  MHRSSSTSRNFDEYSVDMPPGFTSSPPFKNEAPDLLPLFK---IDTPKKEMGPHFKPPGQ 60
          MHR SS SR+ DE+ V++ P   +    +N + + LPLF+    D  KKE G H + PG+
Sbjct: 1  MHRLSSGSRDSDEFLVNLLPASAALSALRNSSANDLPLFRQPSSDLTKKESGAHLRSPGE 60

Query: 61 NAVHLIPLILLLSALILWICS 78
           A+HLIP++L L AL LW+CS
Sbjct: 61 KAIHLIPVVLFLCALTLWLCS 81

[Close]
BLAST of Cp4.1LG04g09700 vs. ExPASy TrEMBL
Match: A0A067KJC2 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_13285 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 2.54e-14
Identity = 44/80 (55.00%), Postives = 51/80 (63.75%), Query Frame = 0 

Query: 1  MHRSSSTSRNFDEYSVDMPPGFTSSPPFKNEAPDLLPLFKI--DTPKKEMGPHFKPPGQN 60
          MHRSSSTSR  DE SV+         P K  +   LP++K   D  KKE+G H K  G+N
Sbjct: 1  MHRSSSTSRAADELSVNFSSDDNIVSPVKTLSSTDLPIYKSSSDASKKEIGLHQKSVGEN 60

Query: 61 AVHLIPLILLLSALILWICS 78
          AVHLIPLILLL ALILW+ S
Sbjct: 61 AVHLIPLILLLCALILWLFS 80

[Close]
BLAST of Cp4.1LG04g09700 vs. TAIR 10
Match: AT2G35658.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G16840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 43.5 bits (101), Expect = 1.2e-04
Identity = 30/85 (35.29%), Postives = 46/85 (54.12%), Query Frame = 0 

Query: 1  MHRSSSTSRNFDEYSVDMPPGFTSSPPFKNEAPD-----LLPLFKIDT-PKKEMGPHFKP 60
          M RS+S S   D+ S + P    S P  K  A       LLP +  ++ P K+    F+ 
Sbjct: 1  MRRSASASIVSDQLSANSPSPSPSPPRIKTSADSDDSHLLLPRYDPNSHPGKKNKSRFR- 60

Query: 61 PGQNAVHLIPLILLLSALILWICSS 80
            +NA+H IP++L+L A+ILW+ S+
Sbjct: 61 SAENAIHFIPIVLILCAVILWMFSN 84

[Close]
BLAST of Cp4.1LG04g09700 vs. TAIR 10
Match: AT2G35658.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G16840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 43.5 bits (101), Expect = 1.2e-04
Identity = 30/85 (35.29%), Postives = 46/85 (54.12%), Query Frame = 0 

Query: 1  MHRSSSTSRNFDEYSVDMPPGFTSSPPFKNEAPD-----LLPLFKIDT-PKKEMGPHFKP 60
          M RS+S S   D+ S + P    S P  K  A       LLP +  ++ P K+    F+ 
Sbjct: 1  MRRSASASIVSDQLSANSPSPSPSPPRIKTSADSDDSHLLLPRYDPNSHPGKKNKSRFR- 60

Query: 61 PGQNAVHLIPLILLLSALILWICSS 80
            +NA+H IP++L+L A+ILW+ S+
Sbjct: 61 SAENAIHFIPIVLILCAVILWMFSN 84

[Close]
BLAST of Cp4.1LG04g09700 vs. TAIR 10
Match: AT2G35658.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G16840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 43.5 bits (101), Expect = 1.2e-04
Identity = 30/85 (35.29%), Postives = 46/85 (54.12%), Query Frame = 0 

Query: 1  MHRSSSTSRNFDEYSVDMPPGFTSSPPFKNEAPD-----LLPLFKIDT-PKKEMGPHFKP 60
          M RS+S S   D+ S + P    S P  K  A       LLP +  ++ P K+    F+ 
Sbjct: 1  MRRSASASIVSDQLSANSPSPSPSPPRIKTSADSDDSHLLLPRYDPNSHPGKKNKSRFR- 60

Query: 61 PGQNAVHLIPLILLLSALILWICSS 80
            +NA+H IP++L+L A+ILW+ S+
Sbjct: 61 SAENAIHFIPIVLILCAVILWMFSN 84

The following BLAST results are available for this feature:
BLAST of Cp4.1LG04g09700 vs.
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG04g09700 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7021797.14.21e-6597.09hypothetical protein SDJN02_15525, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6587911.11.62e-4897.53hypothetical protein SDJN03_16476, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAA0046741.12.00e-2767.90hypothetical protein E6C27_scaffold216G00220 [Cucumis melo var. makuwa] >TYK1451... [more]
KAE8653076.13.53e-2666.25hypothetical protein Csa_019861 [Cucumis sativus][more]
XP_030474027.11.01e-1551.85uncharacterized protein LOC115691521 [Syzygium oleosum][more]
BLAST of Cp4.1LG04g09700 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TZH09.67e-2867.90Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LTP39.67e-2866.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G305730 PE=4 SV=1[more]
A0A438EIF21.69e-1550.00Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_086512 PE=4 SV=1[more]
A0A059CNE31.17e-1445.68Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_C01116 PE=4 SV... [more]
A0A067KJC22.54e-1455.00Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_13285 PE=4 SV=1[more]
BLAST of Cp4.1LG04g09700 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G35658.11.2e-0435.29unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G35658.21.2e-0435.29unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G35658.31.2e-0435.29unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34189TRANSMEMBRANE PROTEINcoord: 1..81
NoneNo IPR availablePANTHERPTHR34189:SF10TRANSMEMBRANE PROTEINcoord: 1..81

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g09700.1Cp4.1LG04g09700.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane