Cp4.1LG04g09470 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGATATGAAATTCGGGAAGAGTCTCAGCAACCAGATCGAAGAGACCTTGCCGGAATGGCGGGATAAGTTCCTCTCCTACAAGGAGCTCAAGAAGAAGCTCAAACTTGTGCAGCCGAAGTCCGGCGACTCTAACAGACCTTTCAAGAAGCCTAGGCTTGATGCTGAGGCCGATGCCGATGCCGATACCGATGCGGATGCTGTCCCCAATGAGGTCGTTGATTTCATCACTCTCTTGGAGAAGGAGCTCGAGAAATTCAATTCGTTCTTCGTTGAGAAGGAGGAGGAATACATCATCAGATTGAAGGTATGTAGGTCTTTTTTTTCACTTTCCAATCAGATTATTGTTGAATAGTGAAGAAGTTTCGACTGAACTACTTGATTTTGTGCATTCAACATTCTGGAAATCTGTTTACTGCATTATTTCAGCGACTAAACGGATGTGTGATGCGAGAAACTTTCGATTTCTGAAATTCTTTGAAGAACTATGGAATTGAACTTTACTTTTGATTAATTAACTTAGCACTAATTTTATTCAACTGTATAAGCAGTTTATTTCTCGACAAAATCTTCATGCACTTAATAAGTTAATTCGACTGATTTTCTATCGTTAAGTAATCCACCGAACCAATCGATGCTTGAGGACTAAAACAACGACGTCGCTTTTCGCTTCGCTAGGTGAAAAGACATCTTACCACATTCCTTTGAAAAGGGACGCTTAATAATTTTATTATTACCCCAAGGTATTCGCTGCGTTTATCAAATTCTAACTCACAAAACATAAAGTAAGAGGCACTCTTTTTTTTTTTTTTTTTTTTCCCTCTCTCAAATTTGCTCTCCTTTTTGACTCTTAGAATAGAGTTCTTTGGCCCACGTTGCAACTACTTTGCCACTCACATGATTATCTGGGGCTGTACATGACCATGCCGGCTGGCTGGTCTTTATTGTCTTGTGTATTTGCGGCAATATTTTATGCACAAAATCGTCCGGTCGCATTGTTTTATTGGTCTAGATCTGGATTCTTATACATCATCCATGCTCCGAGTCACAGTTGGTAAACTGTGCAACTTCGGTAATAATACGACTCAAAAACTAGATTCCTTTGCCCACTTTGTTTGTTTGAGATTTGAGTAGGGCCAGAGAAAGGATATGGTTTAATATTATGCTGTGTGTATTGAATTTGACTTTTGGGAGTCGGGACAACATTGACGTTATTGCACTTTCTGCGTAATCAATGATGTAGGGCGATTGAGAATTTGACAAAACTTGTCTTGGTTTTTGGTGGGGGAATTTGTCAGGAATTACAAGATAGAGTAGCTAAAGTGAAATACTTTGATGAAGAGTTGACACAAATTCGTAAAGAGATTGTTGACTTTCACGGCGAGATGGTTTTATTGGAGAATTACAGTGCTCTTAACTATACAGGTAACCGCACGGTCCCTTTAGTCACTGGAATTATATACTTTTGCTTCATCTTATCATGTACTTTATTTGGATCCTTACATTTTGTTCATGGTCCACTCTTTACTAATCTCTAGTGAGGCTTTGTCTGCCATAAGAGCAGCTTGGCAACTAGAATTTTAAGCTGTTAAGTTCTCAACTTACAAGCTTGAACTCTAGACCTTCAAGATTATCTGCAAACATTTCTTGGCTTATCATCAGGATATCCTTAGGGGTATCGGTCTGTTTGACTTTTAACGGTCATTGTTGGAATGGCCTTTTGTTTCTAGATATTTGTGTTGTGATACTTACTTTTCTATGTATGGTCCTAATGCTTTTCGTAAAGATAATTGCTTTTGGACTTAATTTCTTGGACCTTTTTCTGTGTGTCTATGGTTAGTCCTGAAGGCTAGCACATTATCTCTATGTCATCAATGCACAAACTGCCTCCCCTGCTTTTTTTTCCCCCAATTAGTCCCACCACTTCGAAATTTACATGCCTTCTTCTCATCTTCGACAGGCCTGGCTAAAATCCTCAAGAAATATGACAAAAGAACTGGTGCACTTATTCGCCTACCCTTTATACAGAAGGTACTGCAACAGCCTTTCTTTACCACAGACCTACTCTTTAAGCTTGTCAAAGAGTGTGAGGCTATGCTGGACCGCCTCTTCCCTGCAAACGAACAGCCTGCCTTGGCTGAGGCAGCTGTTGGTGATGAAGGCTGTGCTCCTAGAGCATCTGCCACCGCCACCTCAAACAGCGATGGGCTTCCTGGGATGCCCAAGGAACTCGCAGAGATCGAACAGATGGAGAGCGTGTACATGAAGGGCACGCTATCAGCCTTGCGAGTTCTAAAAGAAATTCGAAGTGGAAGCTCAACTGTTAGTGAATTTTCATTGCCACCATTACAGAAAAATGGATTAGAGGGCACATGGAAAAAGGTTCCCGTGTTGGAACAGGAAGCCATAGCCAAGTAGAATTTGGCTTTCAGAATATAACATCACCTTATTCCATTAGTTTTACGACAGCATCTTGTAAGAATGAATTAGATACTCAAACATGTAAAATCCTAAATATAAACCCAAAAAGTGTTACAAGTAGAAAGCCAATGTTTTTCATGTTTGTTTCGCATTCAAATTACTACATATCTTAAAAAAACTATGATTGAGAATTCATTT AGATATGAAATTCGGGAAGAGTCTCAGCAACCAGATCGAAGAGACCTTGCCGGAATGGCGGGATAAATTGAAGGAATTACAAGATAGAGTAGCTAAAGTGAAATACTTTGATGAAGAGTTGACACAAATTCGTAAAGAGATTGTTGACTTTCACGGCGAGATGGTTTTATTGGAGAATTACAGTGCTCTTAACTATACAGGCCTGGCTAAAATCCTCAAGAAATATGACAAAAGAACTGGTGCACTTATTCGCCTACCCTTTATACAGAAGGTACTGCAACAGCCTTTCTTTACCACAGACCTACTCTTTAAGCTTGTCAAAGAGTGTGAGGCTATGCTGGACCGCCTCTTCCCTGCAAACGAACAGCCTGCCTTGGCTGAGGCAGCTGTTGGTGATGAAGGCTGTGCTCCTAGAGCATCTGCCACCGCCACCTCAAACAGCGATGGGCTTCCTGGGATGCCCAAGGAACTCGCAGAGATCGAACAGATGGAGAGCGTGTACATGAAGGGCACGCTATCAGCCTTGCGAGTTCTAAAAGAAATTCGAAGTGGAAGCTCAACTGTTAGTGAATTTTCATTGCCACCATTACAGAAAAATGGATTAGAGGGCACATGGAAAAAGGTTCCCGTGTTGGAACAGGAAGCCATAGCCAAGTAGAATTTGGCTTTCAGAATATAACATCACCTTATTCCATTAGTTTTACGACAGCATCTTGTAAGAATGAATTAGATACTCAAACATGTAAAATCCTAAATATAAACCCAAAAAGTGTTACAAGTAGAAAGCCAATGTTTTTCATGTTTGTTTCGCATTCAAATTACTACATATCTTAAAAAAACTATGATTGAGAATTCATTT ATGAAATTCGGGAAGAGTCTCAGCAACCAGATCGAAGAGACCTTGCCGGAATGGCGGGATAAATTGAAGGAATTACAAGATAGAGTAGCTAAAGTGAAATACTTTGATGAAGAGTTGACACAAATTCGTAAAGAGATTGTTGACTTTCACGGCGAGATGGTTTTATTGGAGAATTACAGTGCTCTTAACTATACAGGCCTGGCTAAAATCCTCAAGAAATATGACAAAAGAACTGGTGCACTTATTCGCCTACCCTTTATACAGAAGGTACTGCAACAGCCTTTCTTTACCACAGACCTACTCTTTAAGCTTGTCAAAGAGTGTGAGGCTATGCTGGACCGCCTCTTCCCTGCAAACGAACAGCCTGCCTTGGCTGAGGCAGCTGTTGGTGATGAAGGCTGTGCTCCTAGAGCATCTGCCACCGCCACCTCAAACAGCGATGGGCTTCCTGGGATGCCCAAGGAACTCGCAGAGATCGAACAGATGGAGAGCGTGTACATGAAGGGCACGCTATCAGCCTTGCGAGTTCTAAAAGAAATTCGAAGTGGAAGCTCAACTGTTAGTGAATTTTCATTGCCACCATTACAGAAAAATGGATTAGAGGGCACATGGAAAAAGGTTCCCGTGTTGGAACAGGAAGCCATAGCCAAGTAG MKFGKSLSNQIEETLPEWRDKLKELQDRVAKVKYFDEELTQIRKEIVDFHGEMVLLENYSALNYTGLAKILKKYDKRTGALIRLPFIQKVLQQPFFTTDLLFKLVKECEAMLDRLFPANEQPALAEAAVGDEGCAPRASATATSNSDGLPGMPKELAEIEQMESVYMKGTLSALRVLKEIRSGSSTVSEFSLPPLQKNGLEGTWKKVPVLEQEAIAK Homology
BLAST of Cp4.1LG04g09470 vs. ExPASy Swiss-Prot
Match: O48781 (SPX domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=SPX2 PE=2 SV=1) HSP 1 Score: 245.7 bits (626), Expect = 4.7e-64 Identity = 158/292 (54.11%), Postives = 175/292 (59.93%), Query Frame = 0
BLAST of Cp4.1LG04g09470 vs. ExPASy Swiss-Prot
Match: Q8LBH4 (SPX domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=SPX1 PE=1 SV=2) HSP 1 Score: 241.1 bits (614), Expect = 1.2e-62 Identity = 146/281 (51.96%), Postives = 169/281 (60.14%), Query Frame = 0
BLAST of Cp4.1LG04g09470 vs. ExPASy Swiss-Prot
Match: B8B4D0 (SPX domain-containing protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=SPX1 PE=3 SV=1) HSP 1 Score: 240.0 bits (611), Expect = 2.6e-62 Identity = 152/296 (51.35%), Postives = 173/296 (58.45%), Query Frame = 0
BLAST of Cp4.1LG04g09470 vs. ExPASy Swiss-Prot
Match: Q69XJ0 (SPX domain-containing protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SPX1 PE=1 SV=1) HSP 1 Score: 236.9 bits (603), Expect = 2.2e-61 Identity = 151/296 (51.01%), Postives = 172/296 (58.11%), Query Frame = 0
BLAST of Cp4.1LG04g09470 vs. ExPASy Swiss-Prot
Match: Q6Z784 (SPX domain-containing protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=SPX2 PE=1 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 8.9e-47 Identity = 110/180 (61.11%), Postives = 130/180 (72.22%), Query Frame = 0
BLAST of Cp4.1LG04g09470 vs. NCBI nr
Match: XP_023529304.1 (SPX domain-containing protein 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 385 bits (990), Expect = 4.49e-133 Identity = 217/294 (73.81%), Postives = 217/294 (73.81%), Query Frame = 0
BLAST of Cp4.1LG04g09470 vs. NCBI nr
Match: XP_022933982.1 (SPX domain-containing protein 1-like [Cucurbita moschata] >KAG6587900.1 SPX domain-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021786.1 SPX domain-containing protein 1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 379 bits (972), Expect = 2.47e-130 Identity = 213/294 (72.45%), Postives = 215/294 (73.13%), Query Frame = 0
BLAST of Cp4.1LG04g09470 vs. NCBI nr
Match: XP_022970278.1 (SPX domain-containing protein 1-like [Cucurbita maxima]) HSP 1 Score: 373 bits (958), Expect = 3.58e-128 Identity = 210/296 (70.95%), Postives = 213/296 (71.96%), Query Frame = 0
BLAST of Cp4.1LG04g09470 vs. NCBI nr
Match: XP_022145080.1 (SPX domain-containing protein 1-like [Momordica charantia]) HSP 1 Score: 357 bits (916), Expect = 7.15e-122 Identity = 204/290 (70.34%), Postives = 207/290 (71.38%), Query Frame = 0
BLAST of Cp4.1LG04g09470 vs. NCBI nr
Match: XP_004150027.1 (SPX domain-containing protein 1 [Cucumis sativus] >KGN65335.1 hypothetical protein Csa_019662 [Cucumis sativus]) HSP 1 Score: 353 bits (907), Expect = 1.46e-120 Identity = 200/286 (69.93%), Postives = 206/286 (72.03%), Query Frame = 0
BLAST of Cp4.1LG04g09470 vs. ExPASy TrEMBL
Match: A0A6J1F1D3 (SPX domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111441229 PE=4 SV=1) HSP 1 Score: 379 bits (972), Expect = 1.19e-130 Identity = 213/294 (72.45%), Postives = 215/294 (73.13%), Query Frame = 0
BLAST of Cp4.1LG04g09470 vs. ExPASy TrEMBL
Match: A0A6J1I3F6 (SPX domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111469288 PE=4 SV=1) HSP 1 Score: 373 bits (958), Expect = 1.73e-128 Identity = 210/296 (70.95%), Postives = 213/296 (71.96%), Query Frame = 0
BLAST of Cp4.1LG04g09470 vs. ExPASy TrEMBL
Match: A0A6J1CTG3 (SPX domain-containing protein 1-like OS=Momordica charantia OX=3673 GN=LOC111014590 PE=4 SV=1) HSP 1 Score: 357 bits (916), Expect = 3.46e-122 Identity = 204/290 (70.34%), Postives = 207/290 (71.38%), Query Frame = 0
BLAST of Cp4.1LG04g09470 vs. ExPASy TrEMBL
Match: A0A0A0LTT3 (SPX domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G338930 PE=4 SV=1) HSP 1 Score: 353 bits (907), Expect = 7.06e-121 Identity = 200/286 (69.93%), Postives = 206/286 (72.03%), Query Frame = 0
BLAST of Cp4.1LG04g09470 vs. ExPASy TrEMBL
Match: A0A5A7TVC0 (SPX domain-containing protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold216G001110 PE=4 SV=1) HSP 1 Score: 353 bits (905), Expect = 1.47e-120 Identity = 200/287 (69.69%), Postives = 206/287 (71.78%), Query Frame = 0
BLAST of Cp4.1LG04g09470 vs. TAIR 10
Match: AT2G26660.1 (SPX domain gene 2 ) HSP 1 Score: 245.7 bits (626), Expect = 3.3e-65 Identity = 158/292 (54.11%), Postives = 175/292 (59.93%), Query Frame = 0
BLAST of Cp4.1LG04g09470 vs. TAIR 10
Match: AT5G20150.1 (SPX domain gene 1 ) HSP 1 Score: 241.1 bits (614), Expect = 8.2e-64 Identity = 146/281 (51.96%), Postives = 169/281 (60.14%), Query Frame = 0
BLAST of Cp4.1LG04g09470 vs. TAIR 10
Match: AT2G45130.1 (SPX domain gene 3 ) HSP 1 Score: 144.4 bits (363), Expect = 1.0e-34 Identity = 102/249 (40.96%), Postives = 129/249 (51.81%), Query Frame = 0
BLAST of Cp4.1LG04g09470 vs. TAIR 10
Match: AT5G15330.1 (SPX domain gene 4 ) HSP 1 Score: 134.4 bits (337), Expect = 1.1e-31 Identity = 79/187 (42.25%), Postives = 114/187 (60.96%), Query Frame = 0
BLAST of Cp4.1LG04g09470 vs. TAIR 10
Match: AT1G26730.1 (EXS (ERD1/XPR1/SYG1) family protein ) HSP 1 Score: 44.3 bits (103), Expect = 1.5e-04 Identity = 31/104 (29.81%), Postives = 55/104 (52.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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