Cp4.1LG04g09440 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG04g09440
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Zinc finger, RING-CH-type
Location	Cp4.1LG04: 10012056 .. 10014832 (-)
RNA-Seq Expression	Cp4.1LG04g09440
Synteny	Cp4.1LG04g09440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATACTCATAGAGTCCCATTTTGAAACTATAGTCTTTGAATTTATTATATGAAAGAGTTTAGAAATTAATTCCAAAAAATGTTCGGTTCCAAGAATTATTTTAAAAACATCTGTGCTTTCTTCAACATTAATATTCATCAACATCTGCAAAAAGTCCAGTCCGAATATTTCCTCGATTTCAGGTAACTCGATTTGGAGCTCTCTAATTTCTTTTTATTCCAATTACTTTTTACTAGTTTTCTTTTCGTGTTAATTTGGATGAATGATGGATTGACTTCCATATATTTAATTCTAATTCTGGGTAATGGTTTTTGATCTTTGTGAATTTGTGATCAAGTTTGTTCTAGGGCTGAAAGCTTCGGTCGTTCTCTTTCGGGTAAGGAGATAACCAATGAAAGGGGAAGTACAGTTGGAATCGTCTATTGCCCAAAAACCTACTGACTCTGATCCTCTGCTTGAGAATCAGTCCGATTCATCCCATGGTGGAACCTCCGATGAAATCAGGGACGATGAGGATGCTGAAGCTGGTTCCATTCCCTGTTGTCGTATTTGCCTAGAGAGCGACGCTGAACCAGGTCAATTTCATCGTTACTTTCGTCGTTGGATGTTTATTTTCTTTCTTAATTCATGCTCGGTTAAACAATTTAGATGTTGGCGCAATTCTGTTGAATTTTAGCTTCATTGCATCGTGGGGGTTAATACCACTGATTATTACAGTCATATACAAGTTTTCATAGCTGGGGTAATATCTTCTTCCACTGGCTCAAATCCAATTTTCCATTTTACAGAAGATGAACTGATTTCTCCATGCATGTGCAAAGGCACACAGCAGTTTGTCCATCGATCTTGTCTTGATCATTGGCGCTCCATTAAGGCAATTTTCTTTATTTTAGTTCTTCTACGCTGTTCCTGCTTTCGACTATCAAGGATTTGCTTGTTTCCTATTCTATTTTCTTATGATTTTAATCAATCTGAAAGGATTCTCGTAATTCTGCAGGAAGGGTTTGCTTTCTCGCATTGCACAACATGCAAAGCCCAATTTCATCTGAAAGTTTCCTTATTTGAGGACAACTCTTGGCGTAAAGTTAAATTCAGGCTTTTTGTGGCAAGGGATGTTCTCCTTGTATTTCTAGCTGTTCAAACTGTGAGTTCACTTAAAACTTCCTATGATTCTAAATTTCATTCGAATTCTCTTTTTCTGGAATGCATGAGAAAATTAAATGTTTAAACATAAACTTTTATGGAAAATCTTGTCTGCACTTTGATAATGGAGGGTTTATCCCTTTTGCAGTTAATAGCTGCAATAGGTGGTTATGCGTATATTATGGACAAAGATGGGGCATTCAGAAACTCTTTCAGTGATGGATGGGATCGTATTCTCTCCAAACATCCTATTCCATTTTATTACTGTATTGGTAAACTACTTTTATCTAAACTGGTCAGATTTTTCTTTAAGAATTGGGTCTTAGACGTCTCAGATTATCACAAATACAAATGCTTTATTGATAAATTCAGGCTTCGTTGTTCATTTATACTTGAGATAAAGTAGCAAGGATGTCAAATCTCTCATTTTATTAGTGTTGAAAACTTGTTACTAGTTAATGACAGGAAAATGGATATATTCATCTACCTTTCTGTCAAAATAATTAGTTTACCGTGGAGAGGGGAACGAAGCATTCTTTCTAAGGATGTGAAAACCTCTCCCTAGCAGACACGTTTTAAAATCTTGAGGGGGAGCCCGAAAGGAAAAACTCAAAGAGAACAATATCCGCTAGCAAAGGGCTTGGGCTGTTACACATTGACGTATTAACACTCCCCTTTCCCCTGAAAAGTGTGTGAAATCTTTCATTTAAGTTGACTGCCTGTAAAATTAACTTCAGCGTCCATTTCGAATTTGATGTTGAGGTCTTGTCTTGGGATATAGTTCCATTGTTCACCCATTTCTTTCTGAACATTTTTCGTCTTCTAAATTTCATGGTTAGAAGAGCTATTGGATTAATTATATGCATTATCGACAACTTGTTTCATGGAGATTTGATTTCTTAATGTATTATTGTATGCGTGTTTTCCTTATGCCAGGTGTTCTGGCCTTCTTTGTTCTGCTTGGATTTTTCGGGCTCATACTACATTGTTCCTCCCTGAATAGTAACGATCCACGAGTTGCTGGGTGTCACAACTGTTGCTATGGCTGGGGTATCTTGGATTGTTTCCCTGCATCTATGGAGGCCTGCTTTGCACTTGTTATTGTTTTCGTCGTTATCTTTGTAATCCTTGGCATAGCTTATGGTTTCCTCGCTGCTACTATGGCTATCCAAAGGATCTGGCAAAGGCATTACCACATTCTCACCAAAAGGGAGCTGACTAAAGTAAAGTTCTAAACCCGTTTGTGTTCTTTGTCAGTGGATACCATACCTGTTGCTGGTTTTTATACTTCACTTTTCTGTAGGAATATGTGGTGGAGGATCTTCACGGTTGTTATACCCCTCCAAAATTGGATCCAGAACATGAACAGCACTTGAAAATGCTACAGCTCCTGTAATGAATGGCAGATGAGGTGTTAAATTTTCATTTTGTTTGCTATGATCTTTTGTTTGAGACGATACAATGTGCATTTGCTTAACTGCGTTGTTATAAATGAGCAATGTGGAAAATAGATCTTAACTAATTTGTCACTTACCCCTTCTCGCATTTTGAGCACCAGTTTCAGTTTTTAGGCCATTGTCATCTTCAACATTTTGATTGTTTCTCAAGTGTTCATGAAGTGGGGCATTATTCAT

mRNA sequence

TATACTCATAGAGTCCCATTTTGAAACTATAGTCTTTGAATTTATTATATGAAAGAGTTTAGAAATTAATTCCAAAAAATGTTCGGTTCCAAGAATTATTTTAAAAACATCTGTGCTTTCTTCAACATTAATATTCATCAACATCTGCAAAAAGTCCAGTCCGAATATTTCCTCGATTTCAGTTTGTTCTAGGGCTGAAAGCTTCGGTCGTTCTCTTTCGGGTAAGGAGATAACCAATGAAAGGGGAAGTACAGTTGGAATCGTCTATTGCCCAAAAACCTACTGACTCTGATCCTCTGCTTGAGAATCAGTCCGATTCATCCCATGGTGGAACCTCCGATGAAATCAGGGACGATGAGGATGCTGAAGCTGGTTCCATTCCCTGTTGTCGTATTTGCCTAGAGAGCGACGCTGAACCAGAAGATGAACTGATTTCTCCATGCATGTGCAAAGGCACACAGCAGTTTGTCCATCGATCTTGTCTTGATCATTGGCGCTCCATTAAGGCAATTTTCTTTATTTTAGTTCTTCTACGCTGTTCCTGCTTTCGACTATCAAGGATTTGCTTGTTTCCTATTCTATTTTCTTATGATTTTAATCAATCTGAAAGGATTCTCGTAATTCTGCAGGAAGGGTTTGCTTTCTCGCATTGCACAACATGCAAAGCCCAATTTCATCTGAAAGTTTCCTTATTTGAGGACAACTCTTGGCGTAAAGTTAAATTCAGGCTTTTTGTGGCAAGGGATGTTCTCCTTGTATTTCTAGCTGTTCAAACTTTAATAGCTGCAATAGGTGGTTATGCGTATATTATGGACAAAGATGGGGCATTCAGAAACTCTTTCAGTGATGGATGGGATCGTATTCTCTCCAAACATCCTATTCCATTTTATTACTGTATTGGTGTTCTGGCCTTCTTTGTTCTGCTTGGATTTTTCGGGCTCATACTACATTGTTCCTCCCTGAATAGTAACGATCCACGAGTTGCTGGGTGTCACAACTGTTGCTATGGCTGGGGTATCTTGGATTGTTTCCCTGCATCTATGGAGGCCTGCTTTGCACTTGTTATTGTTTTCGTCGTTATCTTTGTAATCCTTGGCATAGCTTATGGTTTCCTCGCTGCTACTATGGCTATCCAAAGGATCTGGCAAAGGCATTACCACATTCTCACCAAAAGGGAGCTGACTAAAGAATATGTGGTGGAGGATCTTCACGGTTGTTATACCCCTCCAAAATTGGATCCAGAACATGAACAGCACTTGAAAATGCTACAGCTCCTGTAATGAATGGCAGATGAGGTGTTAAATTTTCATTTTGTTTGCTATGATCTTTTGTTTGAGACGATACAATGTGCATTTGCTTAACTGCGTTGTTATAAATGAGCAATGTGGAAAATAGATCTTAACTAATTTGTCACTTACCCCTTCTCGCATTTTGAGCACCAGTTTCAGTTTTTAGGCCATTGTCATCTTCAACATTTTGATTGTTTCTCAAGTGTTCATGAAGTGGGGCATTATTCAT

Coding sequence (CDS)

ATGAAAGGGGAAGTACAGTTGGAATCGTCTATTGCCCAAAAACCTACTGACTCTGATCCTCTGCTTGAGAATCAGTCCGATTCATCCCATGGTGGAACCTCCGATGAAATCAGGGACGATGAGGATGCTGAAGCTGGTTCCATTCCCTGTTGTCGTATTTGCCTAGAGAGCGACGCTGAACCAGAAGATGAACTGATTTCTCCATGCATGTGCAAAGGCACACAGCAGTTTGTCCATCGATCTTGTCTTGATCATTGGCGCTCCATTAAGGCAATTTTCTTTATTTTAGTTCTTCTACGCTGTTCCTGCTTTCGACTATCAAGGATTTGCTTGTTTCCTATTCTATTTTCTTATGATTTTAATCAATCTGAAAGGATTCTCGTAATTCTGCAGGAAGGGTTTGCTTTCTCGCATTGCACAACATGCAAAGCCCAATTTCATCTGAAAGTTTCCTTATTTGAGGACAACTCTTGGCGTAAAGTTAAATTCAGGCTTTTTGTGGCAAGGGATGTTCTCCTTGTATTTCTAGCTGTTCAAACTTTAATAGCTGCAATAGGTGGTTATGCGTATATTATGGACAAAGATGGGGCATTCAGAAACTCTTTCAGTGATGGATGGGATCGTATTCTCTCCAAACATCCTATTCCATTTTATTACTGTATTGGTGTTCTGGCCTTCTTTGTTCTGCTTGGATTTTTCGGGCTCATACTACATTGTTCCTCCCTGAATAGTAACGATCCACGAGTTGCTGGGTGTCACAACTGTTGCTATGGCTGGGGTATCTTGGATTGTTTCCCTGCATCTATGGAGGCCTGCTTTGCACTTGTTATTGTTTTCGTCGTTATCTTTGTAATCCTTGGCATAGCTTATGGTTTCCTCGCTGCTACTATGGCTATCCAAAGGATCTGGCAAAGGCATTACCACATTCTCACCAAAAGGGAGCTGACTAAAGAATATGTGGTGGAGGATCTTCACGGTTGTTATACCCCTCCAAAATTGGATCCAGAACATGAACAGCACTTGAAAATGCTACAGCTCCTGTAA

Protein sequence

MKGEVQLESSIAQKPTDSDPLLENQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAEPEDELISPCMCKGTQQFVHRSCLDHWRSIKAIFFILVLLRCSCFRLSRICLFPILFSYDFNQSERILVILQEGFAFSHCTTCKAQFHLKVSLFEDNSWRKVKFRLFVARDVLLVFLAVQTLIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVIFVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKMLQLL

Homology

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BLAST of Cp4.1LG04g09440 vs. ExPASy Swiss-Prot
Match: A0JN69 (E3 ubiquitin-protein ligase MARCHF3 OS=Bos taurus OX=9913 GN=MARCHF3 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.6e-05
Identity = 21/40 (52.50%), Postives = 28/40 (70.00%), Query Frame = 0


Query: 49  PCCRICLESDAEPEDELISPCMCKGTQQFVHRSCLDHWRS 89
           P CRIC E  +  +++L+SPC C GT   +HRSCL+HW S
Sbjct: 69  PMCRICHEGSS--QEDLLSPCECTGTLGTIHRSCLEHWLS 106

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BLAST of Cp4.1LG04g09440 vs. ExPASy Swiss-Prot
Match: Q86UD3 (E3 ubiquitin-protein ligase MARCHF3 OS=Homo sapiens OX=9606 GN=MARCHF3 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.6e-05
Identity = 21/40 (52.50%), Postives = 28/40 (70.00%), Query Frame = 0


Query: 49  PCCRICLESDAEPEDELISPCMCKGTQQFVHRSCLDHWRS 89
           P CRIC E  +  +++L+SPC C GT   +HRSCL+HW S
Sbjct: 69  PMCRICHEGSS--QEDLLSPCECTGTLGTIHRSCLEHWLS 106

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BLAST of Cp4.1LG04g09440 vs. ExPASy Swiss-Prot
Match: Q8BRX9 (E3 ubiquitin-protein ligase MARCHF3 OS=Mus musculus OX=10090 GN=Marchf3 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.6e-05
Identity = 21/40 (52.50%), Postives = 28/40 (70.00%), Query Frame = 0


Query: 49  PCCRICLESDAEPEDELISPCMCKGTQQFVHRSCLDHWRS 89
           P CRIC E  +  +++L+SPC C GT   +HRSCL+HW S
Sbjct: 69  PMCRICHEGSS--QEDLLSPCECTGTLGTIHRSCLEHWLS 106

[Close]

BLAST of Cp4.1LG04g09440 vs. ExPASy Swiss-Prot
Match: Q5XIE5 (E3 ubiquitin-protein ligase MARCHF3 OS=Rattus norvegicus OX=10116 GN=Marchf3 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.6e-05
Identity = 21/40 (52.50%), Postives = 28/40 (70.00%), Query Frame = 0


Query: 49  PCCRICLESDAEPEDELISPCMCKGTQQFVHRSCLDHWRS 89
           P CRIC E  +  +++L+SPC C GT   +HRSCL+HW S
Sbjct: 69  PMCRICHEGSS--QEDLLSPCECTGTLGTIHRSCLEHWLS 106

[Close]

BLAST of Cp4.1LG04g09440 vs. ExPASy Swiss-Prot
Match: Q0IH10 (E3 ubiquitin-protein ligase MARCHF3 OS=Xenopus laevis OX=8355 GN=marchf3 PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 2.1e-05
Identity = 21/40 (52.50%), Postives = 27/40 (67.50%), Query Frame = 0


Query: 49  PCCRICLESDAEPEDELISPCMCKGTQQFVHRSCLDHWRS 89
           P CRIC E     +++L+SPC C GT   +HRSCL+HW S
Sbjct: 68  PMCRICHEGST--QEDLLSPCECTGTLGTIHRSCLEHWLS 105

[Close]

BLAST of Cp4.1LG04g09440 vs. NCBI nr
Match: KAG7021793.1 (hypothetical protein SDJN02_15520 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 677 bits (1747), Expect = 5.16e-245
Identity = 340/364 (93.41%), Postives = 343/364 (94.23%), Query Frame = 0


Query: 1   MKGEVQLESSIAQKPTDSDPLLENQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAE 60
           MKGEVQLESSIAQKPTDSDPLLENQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAE
Sbjct: 1   MKGEVQLESSIAQKPTDSDPLLENQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAE 60

Query: 61  P-----------------EDELISPCMCKGTQQFVHRSCLDHWRSIKAIFFILVLLRCSC 120
           P                 EDELISPCMCKGTQQFVHRSCLDHWRSIKA FFILVLL CSC
Sbjct: 61  PAGVISSSTGSNPIFHFTEDELISPCMCKGTQQFVHRSCLDHWRSIKANFFILVLLLCSC 120

Query: 121 FRLSRICLFPILFSYDFNQSERILVILQEGFAFSHCTTCKAQFHLKVSLFEDNSWRKVKF 180
           FRLSRICLFPILFSY FNQS+RI VILQEGFAFSHCTTCKAQFHLKVSLFED+SWRKVKF
Sbjct: 121 FRLSRICLFPILFSYGFNQSDRIPVILQEGFAFSHCTTCKAQFHLKVSLFEDSSWRKVKF 180

Query: 181 RLFVARDVLLVFLAVQTLIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGV 240
           RLFVARDVLLVFLAVQTLIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGV
Sbjct: 181 RLFVARDVLLVFLAVQTLIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGV 240

Query: 241 LAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVIF 300
           LAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVF+VIF
Sbjct: 241 LAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFIVIF 300

Query: 301 VILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKM 347
           VILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKM
Sbjct: 301 VILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKM 360

[Close]

BLAST of Cp4.1LG04g09440 vs. NCBI nr
Match: XP_022930982.1 (uncharacterized protein LOC111437309 [Cucurbita moschata] >XP_022930991.1 uncharacterized protein LOC111437309 [Cucurbita moschata] >XP_023531724.1 uncharacterized protein LOC111793889 [Cucurbita pepo subsp. pepo] >XP_023531725.1 uncharacterized protein LOC111793889 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 606 bits (1562), Expect = 9.28e-218
Identity = 306/347 (88.18%), Postives = 306/347 (88.18%), Query Frame = 0


Query: 1   MKGEVQLESSIAQKPTDSDPLLENQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAE 60
           MKGEVQLESSIAQKPTDSDPLLENQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAE
Sbjct: 1   MKGEVQLESSIAQKPTDSDPLLENQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAE 60

Query: 61  PEDELISPCMCKGTQQFVHRSCLDHWRSIKAIFFILVLLRCSCFRLSRICLFPILFSYDF 120
           PEDELISPCMCKGTQQFVHRSCLDHWRSIK                              
Sbjct: 61  PEDELISPCMCKGTQQFVHRSCLDHWRSIK------------------------------ 120

Query: 121 NQSERILVILQEGFAFSHCTTCKAQFHLKVSLFEDNSWRKVKFRLFVARDVLLVFLAVQT 180
                      EGFAFSHCTTCKAQFHLKVSLFEDNSWRKVKFRLFVARDVLLVFLAVQT
Sbjct: 121 -----------EGFAFSHCTTCKAQFHLKVSLFEDNSWRKVKFRLFVARDVLLVFLAVQT 180

Query: 181 LIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCS 240
           LIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCS
Sbjct: 181 LIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCS 240

Query: 241 SLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVIFVILGIAYGFLAATMAIQ 300
           SLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVIFVILGIAYGFLAATMAIQ
Sbjct: 241 SLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVIFVILGIAYGFLAATMAIQ 300

Query: 301 RIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKMLQLL 347
           RIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKMLQLL
Sbjct: 301 RIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKMLQLL 306

[Close]

BLAST of Cp4.1LG04g09440 vs. NCBI nr
Match: XP_022965057.1 (uncharacterized protein LOC111465033 [Cucurbita maxima] >XP_022965065.1 uncharacterized protein LOC111465033 [Cucurbita maxima])

HSP 1 Score: 603 bits (1556), Expect = 7.62e-217
Identity = 304/347 (87.61%), Postives = 306/347 (88.18%), Query Frame = 0


Query: 1   MKGEVQLESSIAQKPTDSDPLLENQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAE 60
           MKGEVQLESSIAQKPTDSDPLLENQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAE
Sbjct: 1   MKGEVQLESSIAQKPTDSDPLLENQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAE 60

Query: 61  PEDELISPCMCKGTQQFVHRSCLDHWRSIKAIFFILVLLRCSCFRLSRICLFPILFSYDF 120
           PEDELISPCMCKGTQQFVHRSCLDHWRSIK                              
Sbjct: 61  PEDELISPCMCKGTQQFVHRSCLDHWRSIK------------------------------ 120

Query: 121 NQSERILVILQEGFAFSHCTTCKAQFHLKVSLFEDNSWRKVKFRLFVARDVLLVFLAVQT 180
                      EGFAFSHCTTCK+QFHLKVSLFEDNSWRKVKFRLFVARDVLLVFLAVQT
Sbjct: 121 -----------EGFAFSHCTTCKSQFHLKVSLFEDNSWRKVKFRLFVARDVLLVFLAVQT 180

Query: 181 LIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCS 240
           LIAA+GGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCS
Sbjct: 181 LIAAMGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCS 240

Query: 241 SLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVIFVILGIAYGFLAATMAIQ 300
           SLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVIFVILGIAYGFLAATMAIQ
Sbjct: 241 SLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVIFVILGIAYGFLAATMAIQ 300

Query: 301 RIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKMLQLL 347
           RIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKMLQLL
Sbjct: 301 RIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKMLQLL 306

[Close]

BLAST of Cp4.1LG04g09440 vs. NCBI nr
Match: KAA0046730.1 (Zinc finger, RING-CH-type [Cucumis melo var. makuwa])

HSP 1 Score: 590 bits (1520), Expect = 2.81e-211
Identity = 298/347 (85.88%), Postives = 305/347 (87.90%), Query Frame = 0


Query: 1   MKGEVQLESSIAQKPTDSDPLLENQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAE 60
           MKGEVQLESSI Q P+DSDPLLENQ+DSS  GTSDEI+D ED EAGSIPCCRICLESDAE
Sbjct: 1   MKGEVQLESSIGQNPSDSDPLLENQNDSSSHGTSDEIKD-EDTEAGSIPCCRICLESDAE 60

Query: 61  PEDELISPCMCKGTQQFVHRSCLDHWRSIKAIFFILVLLRCSCFRLSRICLFPILFSYDF 120
           PEDELISPCMCKGTQQFVHRSCLDHWRS+KA FFIL                        
Sbjct: 61  PEDELISPCMCKGTQQFVHRSCLDHWRSVKANFFIL------------------------ 120

Query: 121 NQSERILVILQEGFAFSHCTTCKAQFHLKVSLFEDNSWRKVKFRLFVARDVLLVFLAVQT 180
                      EGFAFSHCTTCKAQFHLKVSLFEDNSWRKVKFRLFVARDVLLVF+AVQT
Sbjct: 121 -----------EGFAFSHCTTCKAQFHLKVSLFEDNSWRKVKFRLFVARDVLLVFIAVQT 180

Query: 181 LIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCS 240
           LIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCS
Sbjct: 181 LIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCS 240

Query: 241 SLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVIFVILGIAYGFLAATMAIQ 300
           SLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVF+VIFVILGIAYGFLAATMAIQ
Sbjct: 241 SLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFIVIFVILGIAYGFLAATMAIQ 300

Query: 301 RIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKMLQLL 347
           RIWQRHYHILTKRELTKEYVVEDLHGCYTPPKL+PEHEQHLKMLQLL
Sbjct: 301 RIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLEPEHEQHLKMLQLL 311

[Close]

BLAST of Cp4.1LG04g09440 vs. NCBI nr
Match: XP_008464996.1 (PREDICTED: uncharacterized protein LOC103502724 [Cucumis melo] >XP_008464997.1 PREDICTED: uncharacterized protein LOC103502724 [Cucumis melo] >TYK14507.1 Zinc finger, RING-CH-type [Cucumis melo var. makuwa])

HSP 1 Score: 581 bits (1497), Expect = 7.18e-208
Identity = 293/347 (84.44%), Postives = 300/347 (86.46%), Query Frame = 0


Query: 1   MKGEVQLESSIAQKPTDSDPLLENQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAE 60
           MKGEVQLESSI Q P+DSDPLLENQ+DSS  GTSDEI+D ED EAGSIPCCRICLESDAE
Sbjct: 1   MKGEVQLESSIGQNPSDSDPLLENQNDSSSHGTSDEIKD-EDTEAGSIPCCRICLESDAE 60

Query: 61  PEDELISPCMCKGTQQFVHRSCLDHWRSIKAIFFILVLLRCSCFRLSRICLFPILFSYDF 120
           PEDELISPCMCKGTQQFVHRSCLDHWRS+K                              
Sbjct: 61  PEDELISPCMCKGTQQFVHRSCLDHWRSVK------------------------------ 120

Query: 121 NQSERILVILQEGFAFSHCTTCKAQFHLKVSLFEDNSWRKVKFRLFVARDVLLVFLAVQT 180
                      EGFAFSHCTTCKAQFHLKVSLFEDNSWRKVKFRLFVARDVLLVF+AVQT
Sbjct: 121 -----------EGFAFSHCTTCKAQFHLKVSLFEDNSWRKVKFRLFVARDVLLVFIAVQT 180

Query: 181 LIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCS 240
           LIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCS
Sbjct: 181 LIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCS 240

Query: 241 SLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVIFVILGIAYGFLAATMAIQ 300
           SLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVF+VIFVILGIAYGFLAATMAIQ
Sbjct: 241 SLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFIVIFVILGIAYGFLAATMAIQ 300

Query: 301 RIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKMLQLL 347
           RIWQRHYHILTKRELTKEYVVEDLHGCYTPPKL+PEHEQHLKMLQLL
Sbjct: 301 RIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLEPEHEQHLKMLQLL 305

[Close]

BLAST of Cp4.1LG04g09440 vs. ExPASy TrEMBL
Match: A0A6J1ESG3 (uncharacterized protein LOC111437309 OS=Cucurbita moschata OX=3662 GN=LOC111437309 PE=4 SV=1)

HSP 1 Score: 606 bits (1562), Expect = 4.49e-218
Identity = 306/347 (88.18%), Postives = 306/347 (88.18%), Query Frame = 0


Query: 1   MKGEVQLESSIAQKPTDSDPLLENQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAE 60
           MKGEVQLESSIAQKPTDSDPLLENQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAE
Sbjct: 1   MKGEVQLESSIAQKPTDSDPLLENQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAE 60

Query: 61  PEDELISPCMCKGTQQFVHRSCLDHWRSIKAIFFILVLLRCSCFRLSRICLFPILFSYDF 120
           PEDELISPCMCKGTQQFVHRSCLDHWRSIK                              
Sbjct: 61  PEDELISPCMCKGTQQFVHRSCLDHWRSIK------------------------------ 120

Query: 121 NQSERILVILQEGFAFSHCTTCKAQFHLKVSLFEDNSWRKVKFRLFVARDVLLVFLAVQT 180
                      EGFAFSHCTTCKAQFHLKVSLFEDNSWRKVKFRLFVARDVLLVFLAVQT
Sbjct: 121 -----------EGFAFSHCTTCKAQFHLKVSLFEDNSWRKVKFRLFVARDVLLVFLAVQT 180

Query: 181 LIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCS 240
           LIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCS
Sbjct: 181 LIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCS 240

Query: 241 SLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVIFVILGIAYGFLAATMAIQ 300
           SLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVIFVILGIAYGFLAATMAIQ
Sbjct: 241 SLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVIFVILGIAYGFLAATMAIQ 300

Query: 301 RIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKMLQLL 347
           RIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKMLQLL
Sbjct: 301 RIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKMLQLL 306

[Close]

BLAST of Cp4.1LG04g09440 vs. ExPASy TrEMBL
Match: A0A6J1HJB0 (uncharacterized protein LOC111465033 OS=Cucurbita maxima OX=3661 GN=LOC111465033 PE=4 SV=1)

HSP 1 Score: 603 bits (1556), Expect = 3.69e-217
Identity = 304/347 (87.61%), Postives = 306/347 (88.18%), Query Frame = 0


Query: 1   MKGEVQLESSIAQKPTDSDPLLENQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAE 60
           MKGEVQLESSIAQKPTDSDPLLENQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAE
Sbjct: 1   MKGEVQLESSIAQKPTDSDPLLENQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAE 60

Query: 61  PEDELISPCMCKGTQQFVHRSCLDHWRSIKAIFFILVLLRCSCFRLSRICLFPILFSYDF 120
           PEDELISPCMCKGTQQFVHRSCLDHWRSIK                              
Sbjct: 61  PEDELISPCMCKGTQQFVHRSCLDHWRSIK------------------------------ 120

Query: 121 NQSERILVILQEGFAFSHCTTCKAQFHLKVSLFEDNSWRKVKFRLFVARDVLLVFLAVQT 180
                      EGFAFSHCTTCK+QFHLKVSLFEDNSWRKVKFRLFVARDVLLVFLAVQT
Sbjct: 121 -----------EGFAFSHCTTCKSQFHLKVSLFEDNSWRKVKFRLFVARDVLLVFLAVQT 180

Query: 181 LIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCS 240
           LIAA+GGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCS
Sbjct: 181 LIAAMGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCS 240

Query: 241 SLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVIFVILGIAYGFLAATMAIQ 300
           SLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVIFVILGIAYGFLAATMAIQ
Sbjct: 241 SLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVIFVILGIAYGFLAATMAIQ 300

Query: 301 RIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKMLQLL 347
           RIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKMLQLL
Sbjct: 301 RIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKMLQLL 306

[Close]

BLAST of Cp4.1LG04g09440 vs. ExPASy TrEMBL
Match: A0A5A7TUB8 (Zinc finger, RING-CH-type OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold216G00100 PE=4 SV=1)

HSP 1 Score: 590 bits (1520), Expect = 1.36e-211
Identity = 298/347 (85.88%), Postives = 305/347 (87.90%), Query Frame = 0


Query: 1   MKGEVQLESSIAQKPTDSDPLLENQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAE 60
           MKGEVQLESSI Q P+DSDPLLENQ+DSS  GTSDEI+D ED EAGSIPCCRICLESDAE
Sbjct: 1   MKGEVQLESSIGQNPSDSDPLLENQNDSSSHGTSDEIKD-EDTEAGSIPCCRICLESDAE 60

Query: 61  PEDELISPCMCKGTQQFVHRSCLDHWRSIKAIFFILVLLRCSCFRLSRICLFPILFSYDF 120
           PEDELISPCMCKGTQQFVHRSCLDHWRS+KA FFIL                        
Sbjct: 61  PEDELISPCMCKGTQQFVHRSCLDHWRSVKANFFIL------------------------ 120

Query: 121 NQSERILVILQEGFAFSHCTTCKAQFHLKVSLFEDNSWRKVKFRLFVARDVLLVFLAVQT 180
                      EGFAFSHCTTCKAQFHLKVSLFEDNSWRKVKFRLFVARDVLLVF+AVQT
Sbjct: 121 -----------EGFAFSHCTTCKAQFHLKVSLFEDNSWRKVKFRLFVARDVLLVFIAVQT 180

Query: 181 LIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCS 240
           LIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCS
Sbjct: 181 LIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCS 240

Query: 241 SLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVIFVILGIAYGFLAATMAIQ 300
           SLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVF+VIFVILGIAYGFLAATMAIQ
Sbjct: 241 SLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFIVIFVILGIAYGFLAATMAIQ 300

Query: 301 RIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKMLQLL 347
           RIWQRHYHILTKRELTKEYVVEDLHGCYTPPKL+PEHEQHLKMLQLL
Sbjct: 301 RIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLEPEHEQHLKMLQLL 311

[Close]

BLAST of Cp4.1LG04g09440 vs. ExPASy TrEMBL
Match: A0A1S3CMV4 (uncharacterized protein LOC103502724 OS=Cucumis melo OX=3656 GN=LOC103502724 PE=4 SV=1)

HSP 1 Score: 581 bits (1497), Expect = 3.48e-208
Identity = 293/347 (84.44%), Postives = 300/347 (86.46%), Query Frame = 0


Query: 1   MKGEVQLESSIAQKPTDSDPLLENQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAE 60
           MKGEVQLESSI Q P+DSDPLLENQ+DSS  GTSDEI+D ED EAGSIPCCRICLESDAE
Sbjct: 1   MKGEVQLESSIGQNPSDSDPLLENQNDSSSHGTSDEIKD-EDTEAGSIPCCRICLESDAE 60

Query: 61  PEDELISPCMCKGTQQFVHRSCLDHWRSIKAIFFILVLLRCSCFRLSRICLFPILFSYDF 120
           PEDELISPCMCKGTQQFVHRSCLDHWRS+K                              
Sbjct: 61  PEDELISPCMCKGTQQFVHRSCLDHWRSVK------------------------------ 120

Query: 121 NQSERILVILQEGFAFSHCTTCKAQFHLKVSLFEDNSWRKVKFRLFVARDVLLVFLAVQT 180
                      EGFAFSHCTTCKAQFHLKVSLFEDNSWRKVKFRLFVARDVLLVF+AVQT
Sbjct: 121 -----------EGFAFSHCTTCKAQFHLKVSLFEDNSWRKVKFRLFVARDVLLVFIAVQT 180

Query: 181 LIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCS 240
           LIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCS
Sbjct: 181 LIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCS 240

Query: 241 SLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVIFVILGIAYGFLAATMAIQ 300
           SLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVF+VIFVILGIAYGFLAATMAIQ
Sbjct: 241 SLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFIVIFVILGIAYGFLAATMAIQ 300

Query: 301 RIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKMLQLL 347
           RIWQRHYHILTKRELTKEYVVEDLHGCYTPPKL+PEHEQHLKMLQLL
Sbjct: 301 RIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLEPEHEQHLKMLQLL 305

[Close]

BLAST of Cp4.1LG04g09440 vs. ExPASy TrEMBL
Match: A0A5D3CRE4 (Zinc finger, RING-CH-type OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold15G00210 PE=4 SV=1)

HSP 1 Score: 581 bits (1497), Expect = 3.48e-208
Identity = 293/347 (84.44%), Postives = 300/347 (86.46%), Query Frame = 0


Query: 1   MKGEVQLESSIAQKPTDSDPLLENQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAE 60
           MKGEVQLESSI Q P+DSDPLLENQ+DSS  GTSDEI+D ED EAGSIPCCRICLESDAE
Sbjct: 1   MKGEVQLESSIGQNPSDSDPLLENQNDSSSHGTSDEIKD-EDTEAGSIPCCRICLESDAE 60

Query: 61  PEDELISPCMCKGTQQFVHRSCLDHWRSIKAIFFILVLLRCSCFRLSRICLFPILFSYDF 120
           PEDELISPCMCKGTQQFVHRSCLDHWRS+K                              
Sbjct: 61  PEDELISPCMCKGTQQFVHRSCLDHWRSVK------------------------------ 120

Query: 121 NQSERILVILQEGFAFSHCTTCKAQFHLKVSLFEDNSWRKVKFRLFVARDVLLVFLAVQT 180
                      EGFAFSHCTTCKAQFHLKVSLFEDNSWRKVKFRLFVARDVLLVF+AVQT
Sbjct: 121 -----------EGFAFSHCTTCKAQFHLKVSLFEDNSWRKVKFRLFVARDVLLVFIAVQT 180

Query: 181 LIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCS 240
           LIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCS
Sbjct: 181 LIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCS 240

Query: 241 SLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVIFVILGIAYGFLAATMAIQ 300
           SLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVF+VIFVILGIAYGFLAATMAIQ
Sbjct: 241 SLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFIVIFVILGIAYGFLAATMAIQ 300

Query: 301 RIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKMLQLL 347
           RIWQRHYHILTKRELTKEYVVEDLHGCYTPPKL+PEHEQHLKMLQLL
Sbjct: 301 RIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLEPEHEQHLKMLQLL 305

[Close]

BLAST of Cp4.1LG04g09440 vs. TAIR 10
Match: AT1G11020.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 471.1 bits (1211), Expect = 7.8e-133
Identity = 246/361 (68.14%), Postives = 273/361 (75.62%), Query Frame = 0


Query: 1   MKGEVQLESSIAQKPTDSDPLLENQSDSSH---------GGTSDEIRDDEDAE--AGSIP 60
           M+GEVQL+   +QK +DS PLL + ++SS           G SDEI+ +ED E  A S P
Sbjct: 2   MQGEVQLQPPDSQKLSDSAPLLGDHTNSSSASPSAASVVAGNSDEIKAEEDLENDASSAP 61

Query: 61  CCRICLESDAE-PEDELISPCMCKGTQQFVHRSCLDHWRSIKAIFFILVLLRCSCFRLSR 120
           CCRICLE D+E   DELISPCMCKGTQQFVHRSCLDHWRS+K                  
Sbjct: 62  CCRICLEDDSELLGDELISPCMCKGTQQFVHRSCLDHWRSVK------------------ 121

Query: 121 ICLFPILFSYDFNQSERILVILQEGFAFSHCTTCKAQFHLKVSLFED-NSW-RKVKFRLF 180
                                  EGFAFSHCTTCKAQFHL+V  FED NSW RK KFRLF
Sbjct: 122 -----------------------EGFAFSHCTTCKAQFHLRVEPFEDNNSWRRKAKFRLF 181

Query: 181 VARDVLLVFLAVQTLIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGVLAF 240
           VARDVLLVFLAVQT+IA + G+AY+MDKDG FRNSF+D WDRILSKHPIPFYYCIGV++F
Sbjct: 182 VARDVLLVFLAVQTVIAVMAGFAYMMDKDGEFRNSFNDDWDRILSKHPIPFYYCIGVISF 241

Query: 241 FVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVIFVIL 300
           FVL GF G+ILHCS+LN NDPR+AGC NCCYGWG+LDCFPASMEACFALV+VFVVIF IL
Sbjct: 242 FVLTGFLGIILHCSALNGNDPRMAGCQNCCYGWGVLDCFPASMEACFALVVVFVVIFAIL 301

Query: 301 GIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKMLQL 348
           G+AYGFLAATMAIQRIWQRHYHILTKRELTKEY+VEDLHG YTPPKLD EHE  LKML+L
Sbjct: 302 GLAYGFLAATMAIQRIWQRHYHILTKRELTKEYIVEDLHGSYTPPKLDAEHEGRLKMLKL 321

[Close]

BLAST of Cp4.1LG04g09440 vs. TAIR 10
Match: AT2G22120.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 194.1 bits (492), Expect = 1.8e-49
Identity = 135/373 (36.19%), Postives = 170/373 (45.58%), Query Frame = 0


Query: 20  PLLE-NQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAEPEDELISPCMCKGTQQFV 79
           P++E ++ D   GG  ++I+            CRICLE+D     + I+PC CKGT ++V
Sbjct: 15  PMVEPSEIDLEAGGPGEQIQ------------CRICLETDGR---DFIAPCKCKGTSKYV 74

Query: 80  HRSCLDHWRSIKAIFFILVLLRCSCFRLSRICLFPILFSYDFNQSERILVILQEGFAFSH 139
           HR CLDHWR+IK                                         EGFAF+H
Sbjct: 75  HRDCLDHWRAIK-----------------------------------------EGFAFAH 134

Query: 140 CTTCKAQFHLKVSLFEDNSWRKVKFRLFVARDVLLVFLAVQTLIAAIGGYAYIMDKDGAF 199
           CTTCKA ++L+V    D  WR +KFR FV RD+L +FLAVQ +IAA+    Y +D     
Sbjct: 135 CTTCKAPYYLRVHSAGDRKWRTLKFRFFVTRDILSIFLAVQLVIAALAYMVYFID----- 194

Query: 200 RNSFSDGWDRIL--SKHPIPFYYCIGVLAFFVLLGFFGLILHCSSLNSNDPRVAGCHN-- 259
             S+   W R +      + FYY  G L FF LLG  G ++ C      +     C    
Sbjct: 195 --SYQQSWLRHIWGFDSEVTFYYMCGALLFFALLGLSGCVITCYDRRVRNDLAQPCRELC 254

Query: 260 -CCYGWGILD--------CFPASMEAC--------------------------FALVIVF 319
            CC   GI          C  A   AC                          F   +V 
Sbjct: 255 LCCCQPGICTDCHLPGTICMWADCTACTEGCASAVSECGGCLGGAGEAGLPLLFITALVI 314

Query: 320 VVIFVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYT-----PPKLD 348
           + +F ++GI Y  L ATM  QRIWQRHYHIL KR LTKEYVVED+ G  T     PP L 
Sbjct: 315 LGLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGSEWSPPALP 324

[Close]

BLAST of Cp4.1LG04g09440 vs. TAIR 10
Match: AT2G22120.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 194.1 bits (492), Expect = 1.8e-49
Identity = 135/373 (36.19%), Postives = 170/373 (45.58%), Query Frame = 0


Query: 20  PLLE-NQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAEPEDELISPCMCKGTQQFV 79
           P++E ++ D   GG  ++I+            CRICLE+D     + I+PC CKGT ++V
Sbjct: 15  PMVEPSEIDLEAGGPGEQIQ------------CRICLETDGR---DFIAPCKCKGTSKYV 74

Query: 80  HRSCLDHWRSIKAIFFILVLLRCSCFRLSRICLFPILFSYDFNQSERILVILQEGFAFSH 139
           HR CLDHWR+IK                                         EGFAF+H
Sbjct: 75  HRDCLDHWRAIK-----------------------------------------EGFAFAH 134

Query: 140 CTTCKAQFHLKVSLFEDNSWRKVKFRLFVARDVLLVFLAVQTLIAAIGGYAYIMDKDGAF 199
           CTTCKA ++L+V    D  WR +KFR FV RD+L +FLAVQ +IAA+    Y +D     
Sbjct: 135 CTTCKAPYYLRVHSAGDRKWRTLKFRFFVTRDILSIFLAVQLVIAALAYMVYFID----- 194

Query: 200 RNSFSDGWDRIL--SKHPIPFYYCIGVLAFFVLLGFFGLILHCSSLNSNDPRVAGCHN-- 259
             S+   W R +      + FYY  G L FF LLG  G ++ C      +     C    
Sbjct: 195 --SYQQSWLRHIWGFDSEVTFYYMCGALLFFALLGLSGCVITCYDRRVRNDLAQPCRELC 254

Query: 260 -CCYGWGILD--------CFPASMEAC--------------------------FALVIVF 319
            CC   GI          C  A   AC                          F   +V 
Sbjct: 255 LCCCQPGICTDCHLPGTICMWADCTACTEGCASAVSECGGCLGGAGEAGLPLLFITALVI 314

Query: 320 VVIFVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYT-----PPKLD 348
           + +F ++GI Y  L ATM  QRIWQRHYHIL KR LTKEYVVED+ G  T     PP L 
Sbjct: 315 LGLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGSEWSPPALP 324

[Close]

BLAST of Cp4.1LG04g09440 vs. TAIR 10
Match: AT1G50440.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 132.9 bits (333), Expect = 5.0e-31
Identity = 100/320 (31.25%), Postives = 136/320 (42.50%), Query Frame = 0


Query: 32  GTSDEIRDDEDAE-----AGSIPCCRICLESDAEPEDELISPCMCKGTQQFVHRSCLDHW 91
           G   EI + +D E     +G  P CRICL+   E   +LI+PC CKGTQ+ VHRSCLD+W
Sbjct: 40  GQVSEIAETDDDETTLLVSGDQPQCRICLDVGGE---DLIAPCNCKGTQKHVHRSCLDNW 99

Query: 92  RSIKAIFFILVLLRCSCFRLSRICLFPILFSYDFNQSERILVILQEGFAFSHCTTCKAQF 151
           RS K                                         EGFAFSHCT C+A F
Sbjct: 100 RSTK-----------------------------------------EGFAFSHCTECRAFF 159

Query: 152 HLKVSLFEDNSWRKVKFRLFVARDVLLVFLAVQTLIAAIGGYAYIMDKDGAFRNSFSDGW 211
            L+ ++  D  W +++F+L VARD   +F++VQ ++A +G   Y    +   R  F    
Sbjct: 160 KLRANVPADRWWLRLRFQLLVARDHAFIFISVQMIVAFLGLLVYKFYGE-ELREMFG--- 219

Query: 212 DRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFP 271
                +HP  FY                                                
Sbjct: 220 ---YEEHPYGFY------------------------------------------------ 249

Query: 272 ASMEACFALVIVFVVIFVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHG 331
                      + V+  V++G+ YGF  A +  Q+I +RHYH+L K+ELTKEY+VED   
Sbjct: 280 ----------TLAVLAIVLVGLLYGFFIAIICGQKINERHYHVLAKQELTKEYIVED-RD 249

Query: 332 CYTPPKLDPEHEQHLKMLQL 347
           C   P+LD  H   LKML L
Sbjct: 340 CKNVPELDQSHVMELKMLGL 249

[Close]

BLAST of Cp4.1LG04g09440 vs. TAIR 10
Match: AT1G50440.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 132.9 bits (333), Expect = 5.0e-31
Identity = 100/320 (31.25%), Postives = 136/320 (42.50%), Query Frame = 0


Query: 32  GTSDEIRDDEDAE-----AGSIPCCRICLESDAEPEDELISPCMCKGTQQFVHRSCLDHW 91
           G   EI + +D E     +G  P CRICL+   E   +LI+PC CKGTQ+ VHRSCLD+W
Sbjct: 40  GQVSEIAETDDDETTLLVSGDQPQCRICLDVGGE---DLIAPCNCKGTQKHVHRSCLDNW 99

Query: 92  RSIKAIFFILVLLRCSCFRLSRICLFPILFSYDFNQSERILVILQEGFAFSHCTTCKAQF 151
           RS K                                         EGFAFSHCT C+A F
Sbjct: 100 RSTK-----------------------------------------EGFAFSHCTECRAFF 159

Query: 152 HLKVSLFEDNSWRKVKFRLFVARDVLLVFLAVQTLIAAIGGYAYIMDKDGAFRNSFSDGW 211
            L+ ++  D  W +++F+L VARD   +F++VQ ++A +G   Y    +   R  F    
Sbjct: 160 KLRANVPADRWWLRLRFQLLVARDHAFIFISVQMIVAFLGLLVYKFYGE-ELREMFG--- 219

Query: 212 DRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFP 271
                +HP  FY                                                
Sbjct: 220 ---YEEHPYGFY------------------------------------------------ 249

Query: 272 ASMEACFALVIVFVVIFVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHG 331
                      + V+  V++G+ YGF  A +  Q+I +RHYH+L K+ELTKEY+VED   
Sbjct: 280 ----------TLAVLAIVLVGLLYGFFIAIICGQKINERHYHVLAKQELTKEYIVED-RD 249

Query: 332 CYTPPKLDPEHEQHLKMLQL 347
           C   P+LD  H   LKML L
Sbjct: 340 CKNVPELDQSHVMELKMLGL 249

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g09440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0JN69	1.6e-05	52.50	E3 ubiquitin-protein ligase MARCHF3 OS=Bos taurus OX=9913 GN=MARCHF3 PE=2 SV=1	[more]
Q86UD3	1.6e-05	52.50	E3 ubiquitin-protein ligase MARCHF3 OS=Homo sapiens OX=9606 GN=MARCHF3 PE=1 SV=1	[more]
Q8BRX9	1.6e-05	52.50	E3 ubiquitin-protein ligase MARCHF3 OS=Mus musculus OX=10090 GN=Marchf3 PE=2 SV=...	[more]
Q5XIE5	1.6e-05	52.50	E3 ubiquitin-protein ligase MARCHF3 OS=Rattus norvegicus OX=10116 GN=Marchf3 PE=...	[more]
Q0IH10	2.1e-05	52.50	E3 ubiquitin-protein ligase MARCHF3 OS=Xenopus laevis OX=8355 GN=marchf3 PE=2 SV...	[more]

BLAST of Cp4.1LG04g09440 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7021793.1	5.16e-245	93.41	hypothetical protein SDJN02_15520 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022930982.1	9.28e-218	88.18	uncharacterized protein LOC111437309 [Cucurbita moschata] >XP_022930991.1 unchar...	[more]
XP_022965057.1	7.62e-217	87.61	uncharacterized protein LOC111465033 [Cucurbita maxima] >XP_022965065.1 uncharac...	[more]
KAA0046730.1	2.81e-211	85.88	Zinc finger, RING-CH-type [Cucumis melo var. makuwa]	[more]
XP_008464996.1	7.18e-208	84.44	PREDICTED: uncharacterized protein LOC103502724 [Cucumis melo] >XP_008464997.1 P...	[more]

BLAST of Cp4.1LG04g09440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ESG3	4.49e-218	88.18	uncharacterized protein LOC111437309 OS=Cucurbita moschata OX=3662 GN=LOC1114373...	[more]
A0A6J1HJB0	3.69e-217	87.61	uncharacterized protein LOC111465033 OS=Cucurbita maxima OX=3661 GN=LOC111465033...	[more]
A0A5A7TUB8	1.36e-211	85.88	Zinc finger, RING-CH-type OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A1S3CMV4	3.48e-208	84.44	uncharacterized protein LOC103502724 OS=Cucumis melo OX=3656 GN=LOC103502724 PE=...	[more]
A0A5D3CRE4	3.48e-208	84.44	Zinc finger, RING-CH-type OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]

BLAST of Cp4.1LG04g09440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G11020.1	7.8e-133	68.14	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G22120.1	1.8e-49	36.19	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G22120.2	1.8e-49	36.19	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT1G50440.1	5.0e-31	31.25	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT1G50440.2	5.0e-31	31.25	RING/FYVE/PHD zinc finger superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 50..92 e-value: 3.3E-12 score: 56.6
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 51..89 e-value: 7.7E-13 score: 48.4
IPR011016	Zinc finger, RING-CH-type	PROSITE	PS51292	ZF_RING_CH	coord: 43..117 score: 18.050488
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 37..156 e-value: 3.8E-18 score: 66.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..43
None	No IPR available	PANTHER	PTHR46347	RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN	coord: 130..347
None	No IPR available	PANTHER	PTHR46347	RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN	coord: 1..93
None	No IPR available	PANTHER	PTHR46347:SF4	RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN	coord: 130..347
None	No IPR available	PANTHER	PTHR46347:SF4	RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN	coord: 1..93
None	No IPR available	CDD	cd16495	RING_CH-C4HC3_MARCH	coord: 51..90 e-value: 4.98353E-17 score: 71.9748
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 49..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g09440.1	Cp4.1LG04g09440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008270	zinc ion binding