Cp4.1LG04g09300 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTCAGATTCGGCACCGCGGGGAAATAGGCGCTTGAAAGAGTTTGGAAACATAGAGATCAAAACAGAATTACAAGATAGAGAGATACAGTGCCGAAAAACGGAGAACGAAGGAACTAGACGAGCTTCACCGCCATTTCCAAAGCTCTCCGGATGCTCTCTTTCTGCCTCTCTTTTAATTTCGTTCATTAACTATCCGGACGAACAAAACCTGTGAGTAACCATGTCTTGGTTGTTTAAGTCTTTTCAAGCAAGCGATGATGATATATCCGCAGAGTCGCCGTTGAACAGTTCGTTGTCGTCGTCGGAATGTGTCCATTTCACCACTGCCGATCCTTCTGTTAAGGACGACTTCACCGCGCTTGGTGAGACGCTGAGCCGTCAGCTACGTGGCCTCTCCAACTTTCTCTCTTCACAACCATCAACAGCGGTGATTGTTGCTGCTGATTCTTCCGAATCGAGTTCAGATTCTTCGTCGCTTTCTCAAAAGCTTCAAGGAATTCGCAATGATCTCGCAGAGATAAACGGTGGCTTGAGAAACGGCTTCTCAATGCTATCTGTTCGTAGCAACAAGGCTGTTGGAGAGATTTGTAGGTTTGCTACTAACTTGCTGCAATTTCAGAGTCGTTCTGATGATGATGAAGAAGATGAGGAATTCGAAGACGAGTGTGTTGATGATACGCCAGGAATTACGGATGAGGTTTTAAATTTTGTTAACGACATTTCTTTGCGGCCAGAGTACTGGACCGACTTTCCCTTGGCGCTTGTTGATACAGGTAACTAAAAGTTTTTTGCTATTCATATTTGTGATAAAACATATGTTCGGTATTTAATCATTGGCCAATGAATTTAGCATAAATAGAGATTAGGATAAAAACATTGTGCCTGCAAATTGCACACAATGTTCTTAAACTAGAGCCAGAAGTGATCATTATTCATTAGAATGCTTCGGTGCCGCTAGCAATAGTATTCTGCATTTTTTCTCTGAGAATTAATTCACATGTTATGAAGCCTAATGTACCAATATAATTTTGTTGGATGCTGAAATCGATCTAGTATTTGAGAGATTAGGCAGGTTGAAATCTATATATCTCGCAACTAGAGACTTGGACATACTGCCTTCAACAATAAATCAAGATCAAGAACTAAACCTGAAAAGAGAAAGCAAAGCTATGTATTCTTTTCTCCATCTCTTTAGCTGATTGCTTTAATGCATGGAAAATATATGTTCCAAATTGGAGTTCGCCTGTTCTGTTTTTAGAGAGAAGTAGCGTGGGGCGTTGGTTTCTTCTAGATGAAGAATACCTGTTATCCAAGTATTCTTCCATCTTATCAGGAGCTTATCCAAATATGTTTCTGACCATAACCATTTAAAGATCATATAGAACTAACACTTTCTCCATATATGTTCTTTTATTCAGTATGGTATCAAATATGTCAAGTATGTGTCAATCCGAGTGTAGCTTAGAGGATAGGACACAATTATCATCTCAAATATTGATGATTCTACTTTCTTCTCCATTACTTAAAAAAGTAGGTCAAGTATGTCTTGTTTCACTTGGTCCTAGGGTAGACGACAAGCAGTCGTCTGAATTTGGTTGTGTACACTACAAGAATTGGTTGCAGGATGGATTAAGATAATTATCAATGTAACTAAGATCGTTTACCATCTTCTGTTAATGAGAATATTCCAAGTGATGATGACACTTTGATGTATACTGATTTCGGAGAGGTAGTTGGGGCATATTCCTACTCAGCTTACTCCGAAAATCCAGGCTGTATTTTCTGTCATCTCCCCCCTCAATAACAAATAGACAAGAAAATTTGGAGAACCTTTGTAGAAAATAATAAATAAAAATTCTAACTCTTTGGTGCTTCTCCAAGAAGCACATGTACTTGTTTCTTTGCAAGTTGGTAATAGCATGTCCTTGGTTGTGGCGTAAAATCTTCAGGTGCTATTTGCTTTATTGCTTTTTGTTTCTCATTTAATGTTTTGGTATAGCCTGAGGACGTAGATACCTGATACCTCTCGTATGATTGAGCTTTTGCTAATTTAGAATTACATCCGCCATAACGAAGGTGCAACTCAACCTTTATGTTAATTGGAATTGCTAATTAGGTTAGCAAAATCCATTCATATTTCCAACTCAAATTTTCTTTTGGTAGTGATAACGATAATTATTGAGAAGTTAAATTTCACATTGAGCACTTTGGATACGTAAGTCGGTTTATATGCTTTAATTTTCATTCACTATTAGCATAATGCATTGATTAGCTTTATTGCAGATTTTGAAATGTCTGACGTTCAAAGAATACACACTTCAACTGTTGAGCAATTGATTCCAAATATCTCAGCTCTTAAAATACAGCTTCAGAGTTCCATGAGCAATGAACGTTTCTGGATGATTTATTTTATATTGTTGCTTCCAAGATTCAACAAAGATGATTTCGAGCTTTTAGAAACCTCTGAGGTAAGACTTATTTCCCTTTTAAAATGCCACATTCTTCATTTTTTAGGTTGTTTGCAGATTATTATGAGTGATGCTTGCTGTTGCATTAAAGCCTAACTGGAATTGCTTTAGGATTTTTTTAATCATAAATTGATTTGGTTGCATTGACTTTTTTTTTTCTTCATAATTTTGGATCTTCCTCTTCTGAGCTAGGAATCATCTTGTGGCTTTCTGTCTGACCTTTCTATCCCTGTCCTGCAAGTTGGACGCCTTTACACATTTTTTGTTTTCAATATTTGCGTTCTGTGTGTTTAATGCATTTCAAGTTCATTGTCTGCTGACTGTTATGCTTACTATTAATATGTTATTAACTTTCCCCTCTTTTCTTTCCATTAATATAGTGCAACTACACTTCATGCTAGAATTGTACGGTCTTTTCATGCTATATTAATGCTAGATAATTTATATAACTTTGACGCATTCCAGTCCTTTATTTGCTTCAAACTGAATATTGTTGGATATTGTCTGCGAATTGAATATTGATATGTATGCCAACGTATTTGTGATGGTTAGATCACCATAATCAAATTGCACCCACACGCGAGAGATCATAATGATAAGCCAAATTGAATTGATCCAAATTTAATGGTTGGGTTCGACCTTTTGCTCTGTTGGTCTGATTTAGTTCAAATGTTTACAGAACTGATGATTATGTTTGGCTTTTTGCATAAGAAAAATGATAACGAAACTGTCCATTTATTTGGGATATATATTTAGAACTTTCTCTAAGAACATAGATATGTTGAAGATTAATATCATACAAATTTCAGTTTACTTAAAGGAACCGCATAGTGGAACTGAAAAAAATTGACCAGTTGGATTCAATCAATTTATAGACTTGTTTGTGGTAAAATTCAGATGTAGTTTTCAGAAAAGTACCAAGGACGTAGGTTCAAATCGATTTGGTCAAGTCCAAATTGAACTGATGAACGCCTCTAGTTTTTCACTTTTCATCACAGGCTTCTGTAGCTGTTTTTGTGATCTATGACGAGACTAACTTGATTACATAGAATTAGTAGGTTGACTTTAAACATAACTTTCAATTTTATTAGAGAGCGACAACCTTAATTACACTAATCCAGATTCTCTTCTGTTTCTGTTGCGATCTTATGCCTTTTTTTTTTCCGTTTCAGTTGGGTTCTTCTTTGCCTGTCTATAACGTTTAAGTAATTAACTTTGACCGAATGCATGATTGCAATTAACATGACTTTTACTTGAAGTTTCTGATTAATAGTGTGACATCTTTGTTCTTTTTTGGTAGATTGTCGAAGCAAGAAACCTACTTCTGGATAAATTTCAAAGAAAAGAGAAATCACAGGTGAACTCTGAGGATACTTGTGATAACAACAATTTAGTTTGTGGCACTCAAATGGGAAATATGCCATCTGAGGAAAAGGAAAAATCGACTCAAACCACTGAGGGAGGCGAAGGATTGGAAATTATGGATGGAGAGGAAGAGAATACCAATCACCAGTTGAAAATGGCAGATTCAAAAACTTCTGCCGATGTCAAAGAAAGGAGTGGTCTTGAAGGTACAATATCATTCAGTGAAATAGAGGATTATGGGACCGATTTGTCTGGAAAGTTCTCTGTAATAACCCCCCCAAGGACTTCTTCATCAACCGAGTCCAGTGATTGGGTTCATCTGCATGAAAATGCAGGCTCGAAGCTGGATCAGCAGCAGAGAACATGGAAGCAGGACACAGAGTCAGACGGTGGGGATTCAAGTGATTGGTTTAATGTGGATGAATTTGACTAAAAAGGTGGACGTAACCTCGTATTTCCCCAACCTCAACCCCCACTATTTTTCCCCCCCAAAAAGTTCGAGTTTAATAAAAACGAAAAAACCCTTAGTTTGCCTCTAGAGTAGAGTAGTTTCAAAGGAATAGGTCTTATTTATCTTCCACTTAGTTTCTTTCAAGGATAAATTTTGTGCATATGTTCTTTTCAGAAGGTGTTGAGATTCTAGTAGAGAATTTCACTCAATTGTTATTCCCTCAATTGAACATTCCAAACTAATTCTCTAGATGAGGTCGCTGATTTACGTTTAGGTTTTCTATTTTTTAAAACTAGGCTTACAGTATCCATTTATTATTGCAATTTTTTTTTCACTTCTTAAAAAGTGCCTTTAAAATCTTGGCGATAAAGGGTCGAGATTAAATTGTAATTAAATGTCCTCTTAAGAATTTCATCTCAAGGGTAGATGTGTGTATAGTGGATATAGACTTGCGTATCTTACCGACATATGCCACAACTTGTGCTAGCCACGAGGAGTTGATGCTTCCAGCGCCTGCGCCAATAGGCAAAGGTTGGATGAAAGTGGATCGAATTGACTCTAATCTGTACAGTAAATTTTGCTGAACAAGATTTGAACTGTATATATTTTAGTGTACGACTACGATACCGTAAAGGCACATGTTCTTAATAAGTGATAAATAGGTCACTTAGCTGCGTTTTGTGCATTCGTTTAATTGAAGCAGGACGGCAGTAGAGGTCCTTCGCAGAAAAATGCTAGCACAATAT ATTTCAGATTCGGCACCGCGGGGAAATAGGCGCTTGAAAGAGTTTGGAAACATAGAGATCAAAACAGAATTACAAGATAGAGAGATACAGTGCCGAAAAACGGAGAACGAAGGAACTAGACGAGCTTCACCGCCATTTCCAAAGCTCTCCGGATGCTCTCTTTCTGCCTCTCTTTTAATTTCGTTCATTAACTATCCGGACGAACAAAACCTGTGAGTAACCATGTCTTGGTTGTTTAAGTCTTTTCAAGCAAGCGATGATGATATATCCGCAGAGTCGCCGTTGAACAGTTCGTTGTCGTCGTCGGAATGTGTCCATTTCACCACTGCCGATCCTTCTGTTAAGGACGACTTCACCGCGCTTGGTGAGACGCTGAGCCGTCAGCTACGTGGCCTCTCCAACTTTCTCTCTTCACAACCATCAACAGCGGTGATTGTTGCTGCTGATTCTTCCGAATCGAGTTCAGATTCTTCGTCGCTTTCTCAAAAGCTTCAAGGAATTCGCAATGATCTCGCAGAGATAAACGGTGGCTTGAGAAACGGCTTCTCAATGCTATCTGTTCGTAGCAACAAGGCTGTTGGAGAGATTTGTAGGTTTGCTACTAACTTGCTGCAATTTCAGAGTCGTTCTGATGATGATGAAGAAGATGAGGAATTCGAAGACGAGTGTGTTGATGATACGCCAGGAATTACGGATGAGGTTTTAAATTTTGTTAACGACATTTCTTTGCGGCCAGAGTACTGGACCGACTTTCCCTTGGCGCTTGTTGATACAGATTTTGAAATGTCTGACGTTCAAAGAATACACACTTCAACTGTTGAGCAATTGATTCCAAATATCTCAGCTCTTAAAATACAGCTTCAGAGTTCCATGAGCAATGAACGTTTCTGGATGATTTATTTTATATTGTTGCTTCCAAGATTCAACAAAGATGATTTCGAGCTTTTAGAAACCTCTGAGATTGTCGAAGCAAGAAACCTACTTCTGGATAAATTTCAAAGAAAAGAGAAATCACAGGTGAACTCTGAGGATACTTGTGATAACAACAATTTAGTTTGTGGCACTCAAATGGGAAATATGCCATCTGAGGAAAAGGAAAAATCGACTCAAACCACTGAGGGAGGCGAAGGATTGGAAATTATGGATGGAGAGGAAGAGAATACCAATCACCAGTTGAAAATGGCAGATTCAAAAACTTCTGCCGATGTCAAAGAAAGGAGTGGTCTTGAAGGTACAATATCATTCAGTGAAATAGAGGATTATGGGACCGATTTGTCTGGAAAGTTCTCTGTAATAACCCCCCCAAGGACTTCTTCATCAACCGAGTCCAGTGATTGGGTTCATCTGCATGAAAATGCAGGCTCGAAGCTGGATCAGCAGCAGAGAACATGGAAGCAGGACACAGAGTCAGACGGTGGGGATTCAAGTGATTGGTTTAATGTGGATGAATTTGACTAAAAAGGTGGACGTAACCTCGTATTTCCCCAACCTCAACCCCCACTATTTTTCCCCCCCAAAAAGTTCGAGTTTAATAAAAACGAAAAAACCCTTAGTTTGCCTCTAGAGTAGAGTAGTTTCAAAGGAATAGGTCTTATTTATCTTCCACTTAGTTTCTTTCAAGGATAAATTTTGTGCATATGTTCTTTTCAGAAGGTGTTGAGATTCTAGTAGAGAATTTCACTCAATTGTTATTCCCTCAATTGAACATTCCAAACTAATTCTCTAGATGAGGTCGCTGATTTACGTTTAGGTTTTCTATTTTTTAAAACTAGGCTTACAGTATCCATTTATTATTGCAATTTTTTTTTCACTTCTTAAAAAGTGCCTTTAAAATCTTGGCGATAAAGGGTCGAGATTAAATTGTAATTAAATGTCCTCTTAAGAATTTCATCTCAAGGGTAGATGTGTGTATAGTGGATATAGACTTGCGTATCTTACCGACATATGCCACAACTTGTGCTAGCCACGAGGAGTTGATGCTTCCAGCGCCTGCGCCAATAGGCAAAGGTTGGATGAAAGTGGATCGAATTGACTCTAATCTGTACAGTAAATTTTGCTGAACAAGATTTGAACTGTATATATTTTAGTGTACGACTACGATACCGTAAAGGCACATGTTCTTAATAAGTGATAAATAGGTCACTTAGCTGCGTTTTGTGCATTCGTTTAATTGAAGCAGGACGGCAGTAGAGGTCCTTCGCAGAAAAATGCTAGCACAATAT ATGTCTTGGTTGTTTAAGTCTTTTCAAGCAAGCGATGATGATATATCCGCAGAGTCGCCGTTGAACAGTTCGTTGTCGTCGTCGGAATGTGTCCATTTCACCACTGCCGATCCTTCTGTTAAGGACGACTTCACCGCGCTTGGTGAGACGCTGAGCCGTCAGCTACGTGGCCTCTCCAACTTTCTCTCTTCACAACCATCAACAGCGGTGATTGTTGCTGCTGATTCTTCCGAATCGAGTTCAGATTCTTCGTCGCTTTCTCAAAAGCTTCAAGGAATTCGCAATGATCTCGCAGAGATAAACGGTGGCTTGAGAAACGGCTTCTCAATGCTATCTGTTCGTAGCAACAAGGCTGTTGGAGAGATTTGTAGGTTTGCTACTAACTTGCTGCAATTTCAGAGTCGTTCTGATGATGATGAAGAAGATGAGGAATTCGAAGACGAGTGTGTTGATGATACGCCAGGAATTACGGATGAGGTTTTAAATTTTGTTAACGACATTTCTTTGCGGCCAGAGTACTGGACCGACTTTCCCTTGGCGCTTGTTGATACAGATTTTGAAATGTCTGACGTTCAAAGAATACACACTTCAACTGTTGAGCAATTGATTCCAAATATCTCAGCTCTTAAAATACAGCTTCAGAGTTCCATGAGCAATGAACGTTTCTGGATGATTTATTTTATATTGTTGCTTCCAAGATTCAACAAAGATGATTTCGAGCTTTTAGAAACCTCTGAGATTGTCGAAGCAAGAAACCTACTTCTGGATAAATTTCAAAGAAAAGAGAAATCACAGGTGAACTCTGAGGATACTTGTGATAACAACAATTTAGTTTGTGGCACTCAAATGGGAAATATGCCATCTGAGGAAAAGGAAAAATCGACTCAAACCACTGAGGGAGGCGAAGGATTGGAAATTATGGATGGAGAGGAAGAGAATACCAATCACCAGTTGAAAATGGCAGATTCAAAAACTTCTGCCGATGTCAAAGAAAGGAGTGGTCTTGAAGGTACAATATCATTCAGTGAAATAGAGGATTATGGGACCGATTTGTCTGGAAAGTTCTCTGTAATAACCCCCCCAAGGACTTCTTCATCAACCGAGTCCAGTGATTGGGTTCATCTGCATGAAAATGCAGGCTCGAAGCTGGATCAGCAGCAGAGAACATGGAAGCAGGACACAGAGTCAGACGGTGGGGATTCAAGTGATTGGTTTAATGTGGATGAATTTGACTAA MSWLFKSFQASDDDISAESPLNSSLSSSECVHFTTADPSVKDDFTALGETLSRQLRGLSNFLSSQPSTAVIVAADSSESSSDSSSLSQKLQGIRNDLAEINGGLRNGFSMLSVRSNKAVGEICRFATNLLQFQSRSDDDEEDEEFEDECVDDTPGITDEVLNFVNDISLRPEYWTDFPLALVDTDFEMSDVQRIHTSTVEQLIPNISALKIQLQSSMSNERFWMIYFILLLPRFNKDDFELLETSEIVEARNLLLDKFQRKEKSQVNSEDTCDNNNLVCGTQMGNMPSEEKEKSTQTTEGGEGLEIMDGEEENTNHQLKMADSKTSADVKERSGLEGTISFSEIEDYGTDLSGKFSVITPPRTSSSTESSDWVHLHENAGSKLDQQQRTWKQDTESDGGDSSDWFNVDEFD Homology
BLAST of Cp4.1LG04g09300 vs. NCBI nr
Match: XP_023530961.1 (uncharacterized protein LOC111793348 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 785 bits (2027), Expect = 8.45e-286 Identity = 411/411 (100.00%), Postives = 411/411 (100.00%), Query Frame = 0
BLAST of Cp4.1LG04g09300 vs. NCBI nr
Match: XP_022925051.1 (uncharacterized protein LOC111432412 [Cucurbita moschata]) HSP 1 Score: 762 bits (1967), Expect = 1.18e-276 Identity = 398/411 (96.84%), Postives = 405/411 (98.54%), Query Frame = 0
BLAST of Cp4.1LG04g09300 vs. NCBI nr
Match: KAG6587879.1 (hypothetical protein SDJN03_16444, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 758 bits (1956), Expect = 5.80e-275 Identity = 398/412 (96.60%), Postives = 404/412 (98.06%), Query Frame = 0
BLAST of Cp4.1LG04g09300 vs. NCBI nr
Match: XP_023002875.1 (uncharacterized protein LOC111496608 [Cucurbita maxima]) HSP 1 Score: 753 bits (1943), Expect = 5.55e-273 Identity = 398/412 (96.60%), Postives = 402/412 (97.57%), Query Frame = 0
BLAST of Cp4.1LG04g09300 vs. NCBI nr
Match: XP_023516908.1 (uncharacterized protein LOC111780673 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 518 bits (1334), Expect = 1.59e-180 Identity = 292/412 (70.87%), Postives = 330/412 (80.10%), Query Frame = 0
BLAST of Cp4.1LG04g09300 vs. ExPASy TrEMBL
Match: A0A6J1EB50 (uncharacterized protein LOC111432412 OS=Cucurbita moschata OX=3662 GN=LOC111432412 PE=4 SV=1) HSP 1 Score: 762 bits (1967), Expect = 5.70e-277 Identity = 398/411 (96.84%), Postives = 405/411 (98.54%), Query Frame = 0
BLAST of Cp4.1LG04g09300 vs. ExPASy TrEMBL
Match: A0A6J1KQ70 (uncharacterized protein LOC111496608 OS=Cucurbita maxima OX=3661 GN=LOC111496608 PE=4 SV=1) HSP 1 Score: 753 bits (1943), Expect = 2.69e-273 Identity = 398/412 (96.60%), Postives = 402/412 (97.57%), Query Frame = 0
BLAST of Cp4.1LG04g09300 vs. ExPASy TrEMBL
Match: A0A6J1H9V9 (uncharacterized protein LOC111461455 OS=Cucurbita moschata OX=3662 GN=LOC111461455 PE=4 SV=1) HSP 1 Score: 508 bits (1307), Expect = 9.73e-177 Identity = 288/412 (69.90%), Postives = 328/412 (79.61%), Query Frame = 0
BLAST of Cp4.1LG04g09300 vs. ExPASy TrEMBL
Match: A0A6J1JB79 (uncharacterized protein LOC111485208 OS=Cucurbita maxima OX=3661 GN=LOC111485208 PE=4 SV=1) HSP 1 Score: 507 bits (1305), Expect = 2.10e-176 Identity = 290/415 (69.88%), Postives = 333/415 (80.24%), Query Frame = 0
BLAST of Cp4.1LG04g09300 vs. ExPASy TrEMBL
Match: A0A5D3C7N5 (Putative BSD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G00610 PE=4 SV=1) HSP 1 Score: 468 bits (1205), Expect = 2.71e-161 Identity = 279/418 (66.75%), Postives = 310/418 (74.16%), Query Frame = 0
BLAST of Cp4.1LG04g09300 vs. TAIR 10
Match: AT2G10950.1 (BSD domain-containing protein ) HSP 1 Score: 168.3 bits (425), Expect = 1.3e-41 Identity = 151/413 (36.56%), Postives = 201/413 (48.67%), Query Frame = 0
BLAST of Cp4.1LG04g09300 vs. TAIR 10
Match: AT5G65910.1 (BSD domain-containing protein ) HSP 1 Score: 128.6 bits (322), Expect = 1.1e-29 Identity = 133/463 (28.73%), Postives = 212/463 (45.79%), Query Frame = 0
BLAST of Cp4.1LG04g09300 vs. TAIR 10
Match: AT1G10720.1 (BSD domain-containing protein ) HSP 1 Score: 120.6 bits (301), Expect = 3.1e-27 Identity = 96/248 (38.71%), Postives = 129/248 (52.02%), Query Frame = 0
BLAST of Cp4.1LG04g09300 vs. TAIR 10
Match: AT3G49800.1 (BSD domain-containing protein ) HSP 1 Score: 118.2 bits (295), Expect = 1.5e-26 Identity = 116/358 (32.40%), Postives = 167/358 (46.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|