Cp4.1LG04g09150 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG04g09150
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionSerine-rich protein-like protein
LocationCp4.1LG04: 10282778 .. 10284894 (-)
RNA-Seq ExpressionCp4.1LG04g09150
SyntenyCp4.1LG04g09150
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGTTTCTTCTAGAAAATCGAGTGGGCCGGTTCTGAGGTCTCTCTCACCTTCTGGGAGATTCTATGGCTCCTATTCTTCTTCTATGTCCTCTGGCTCATCGGCTTTTGCGTCTTCTACGTCGAGCTTTTCCACCAGAAACCCTACGTTTTTCCGTAGATCTGTGTCTCCTTCTCGTATTGATCTTCAACCTTCTTCTTCTCCGTCGGCGTCGTCCGTGAGATTTTCATTGGACCGGTCTATTTCTCCGAATCGGCCGATTTCTGTTTCCACTCGTATCAGTGGGAATCAAGTTGTGAAGAGGCAGAGCAACCAGAAGAGGACCTGCATGTGCTCACCGACTACGCATCCTGGTTCGTTCAGATGTAGTCTCCATAAAGGCGTTCCGTCACAGCCTTCGACTCCTTACTCGTCTAATCGGCTCAACGCGCGGAGATCGGCGATGACGAACTCTCTTGTCAGAATCGGAGGAGTTGAAGGCGATTTAGTGAAGCGTGCCTTGGCGTCCCTCATCCGGCCTTCGTCTCATAGTCAAAGGCGCCGAGCGGATTTCTGTCCGAGACCGAGCCGGCTTTCGAACATGTCGAAAGCCGATGATTTGTGATGGAGATTTTGGTACGTTGGCGAATATCCTCTGGTTTATTAATCTGTTTTCCTCTTCTCTGAGTTTCCGTCAACGAAGACGGGAGATTCCGACCACTGGTTCGACGGCAGTTACGGATCGTAGCTCAAAGGATGCGGAATCGGAGGCGAAGCATGGGAATCATATCTGGTTGCCTCTCCAGTAAACCTTGCTGCCCGGAGTTGGACTAGAGAACCTATATAACTTTGTGTATATGCAGCATATATAAATATATGGAAGACATATATAGTTGCCGCGACATTGATAACAATTCGTGGAGCTTCTGGACACTAATTTTTCACCAATTTCAAAATTTAACAGTCAATTCATTCCTAAATGGTCTTAGTCTCGAACTAATTTCAAATGAAACGATAAAATTAATTTCGTCTGCCAATCGGTGAATTCAGTTCATTGAATTAATGTTCCACGAACTCGCTTCGTACTGTTTCCAGAGCGGTTGTTCTTGTTTGGTTGGGCGTCGGCCGTCTCCTTCTTTCCGTTGTCGACTCTGTCCATTGTCGGTGTGAAATTGTAGCCGGAAAGTTGCGTGCTGATGATTACCGATATCCGTTCGGTCAACGTGGTGATTTCTCAAAGGTAAAGTAATTTCATCTTTAATCTTCCTATTTCTCTGTTTCTTCGAGTTTTCAGTTGGTTATAATGTCTGTTTATGTTCTGTATCATTTACAGGTTGATACGGAAGGAGTCCTTGAAGTATGAATTTGTGATCAGAAAGTAGGATTTATGATTTGAGAAATTAGGCGGAGATGTTCAAGTTTGGATGAATTTGTGAACTAGGACACTTTGAGATCTGAACACAAACTGAACAAATTCAATTCATATTAACTGGAATCTATACAACATAAAATAAATGTTAAAAGAACCAAGTTCGAAGGAAAGAATTGGACGGAAGAAAACTGAAACATACGTGATCATGATGATATGGTGCGGTAGACGGTGGAGGTGGATGGTAAACCTGGTGATGTTCCAAATCGGTGGAGGGACCGACTTCTACTTCCACACGAAAAACCAATCCGAAGAACAAACCCTATCAAATGTTCACAATAATTGATATTGAGAAACTAAAAGTCCATTCAATTGAAATTCTACCCATCTTTGTATCATGAACTTGATGATACACAACGAGAGCGTTACCTCCCCCCATATCCAAGATTAGGACGGTGAGACATGCAGCACAAATTGATATACATTACTATGTTCAGAGAAATTTTGGCATCTTCTCAAAATTCAAGGCTGAAGTATAAACTTGGTGTATGAACATAAATGATAGGTGGGGGAATCCCGAGAATGGAGACAACTCCCTACCTCGAGAACAACCATATCCAATCTCCATCCTCCAACCTCTTATCTCCAACTCTCTCGCATTTCTATGAACTTTAGGTCCACCTTATGCTTCCACATCGACCATTCAATTTTTTCTATTATTTATTTCTTTAATAGATGGGTATCATATATCAAGATAAGAATTCAAA

mRNA sequence

ATGGCGGTTTCTTCTAGAAAATCGAGTGGGCCGGTTCTGAGGTCTCTCTCACCTTCTGGGAGATTCTATGGCTCCTATTCTTCTTCTATGTCCTCTGGCTCATCGGCTTTTGCGTCTTCTACGTCGAGCTTTTCCACCAGAAACCCTACGTTTTTCCGTAGATCTGTGTCTCCTTCTCGTATTGATCTTCAACCTTCTTCTTCTCCGTCGGCGTCGTCCGTGAGATTTTCATTGGACCGGTCTATTTCTCCGAATCGGCCGATTTCTGTTTCCACTCGTATCAGTGGGAATCAAGTTGTGAAGAGGCAGAGCAACCAGAAGAGGACCTGCATGTGCTCACCGACTACGCATCCTGGTTCGTTCAGATGTAGTCTCCATAAAGGCGTTCCGTCACAGCCTTCGACTCCTTACTCGTCTAATCGGCTCAACGCGCGGAGATCGGCGATGACGAACTCTCTTGTCAGAATCGGAGGAGTTGAAGGCGATTTAGTGAAGCGTGCCTTGGCGTCCCTCATCCGGCCTTCGTCTCATAGTCAAAGGCGCCGAGCGGATTTCTGTCCGAGACCGAGCCGGCTTTCGAACATGTCGAAAGCCGATGATTTACGGGAGATTCCGACCACTGGTTCGACGGCAGTTACGGATCGTAGCTCAAAGGATGCGGAATCGGAGGCGAAGCATGGGAATCATATCTGGTTGCCTCTCCAAGCGGTTGTTCTTGTTTGGTTGGGCGTCGGCCGTCTCCTTCTTTCCGTTGTCGACTCTGTCCATTGTCGGTGTGAAATTGTAGCCGGAAAGTTGCGTGCTGATGATTACCGATATCCGTTCGGTCAACGTGGTGATTTCTCAAAGGTTGATACGGAAGGAGTCCTTGAAGTATGAATTTGTGATCAGAAAGTAGGATTTATGATTTGAGAAATTAGGCGGAGATGTTCAAGTTTGGATGAATTTGTGAACTAGGACACTTTGAGATCTGAACACAAACTGAACAAATTCAATTCATATTAACTGGAATCTATACAACATAAAATAAATGTTAAAAGAACCAAGTTCGAAGGAAAGAATTGGACGGAAGAAAACTGAAACATACGTGATCATGATGATATGGTGCGGTAGACGGTGGAGGTGGATGGTAAACCTGGTGATGTTCCAAATCGGTGGAGGGACCGACTTCTACTTCCACACGAAAAACCAATCCGAAGAACAAACCCTATCAAATGTTCACAATAATTGATATTGAGAAACTAAAAGTCCATTCAATTGAAATTCTACCCATCTTTGTATCATGAACTTGATGATACACAACGAGAGCGTTACCTCCCCCCATATCCAAGATTAGGACGGTGAGACATGCAGCACAAATTGATATACATTACTATGTTCAGAGAAATTTTGGCATCTTCTCAAAATTCAAGGCTGAAGTATAAACTTGGTGTATGAACATAAATGATAGGTGGGGGAATCCCGAGAATGGAGACAACTCCCTACCTCGAGAACAACCATATCCAATCTCCATCCTCCAACCTCTTATCTCCAACTCTCTCGCATTTCTATGAACTTTAGGTCCACCTTATGCTTCCACATCGACCATTCAATTTTTTCTATTATTTATTTCTTTAATAGATGGGTATCATATATCAAGATAAGAATTCAAA

Coding sequence (CDS)

ATGGCGGTTTCTTCTAGAAAATCGAGTGGGCCGGTTCTGAGGTCTCTCTCACCTTCTGGGAGATTCTATGGCTCCTATTCTTCTTCTATGTCCTCTGGCTCATCGGCTTTTGCGTCTTCTACGTCGAGCTTTTCCACCAGAAACCCTACGTTTTTCCGTAGATCTGTGTCTCCTTCTCGTATTGATCTTCAACCTTCTTCTTCTCCGTCGGCGTCGTCCGTGAGATTTTCATTGGACCGGTCTATTTCTCCGAATCGGCCGATTTCTGTTTCCACTCGTATCAGTGGGAATCAAGTTGTGAAGAGGCAGAGCAACCAGAAGAGGACCTGCATGTGCTCACCGACTACGCATCCTGGTTCGTTCAGATGTAGTCTCCATAAAGGCGTTCCGTCACAGCCTTCGACTCCTTACTCGTCTAATCGGCTCAACGCGCGGAGATCGGCGATGACGAACTCTCTTGTCAGAATCGGAGGAGTTGAAGGCGATTTAGTGAAGCGTGCCTTGGCGTCCCTCATCCGGCCTTCGTCTCATAGTCAAAGGCGCCGAGCGGATTTCTGTCCGAGACCGAGCCGGCTTTCGAACATGTCGAAAGCCGATGATTTACGGGAGATTCCGACCACTGGTTCGACGGCAGTTACGGATCGTAGCTCAAAGGATGCGGAATCGGAGGCGAAGCATGGGAATCATATCTGGTTGCCTCTCCAAGCGGTTGTTCTTGTTTGGTTGGGCGTCGGCCGTCTCCTTCTTTCCGTTGTCGACTCTGTCCATTGTCGGTGTGAAATTGTAGCCGGAAAGTTGCGTGCTGATGATTACCGATATCCGTTCGGTCAACGTGGTGATTTCTCAAAGGTTGATACGGAAGGAGTCCTTGAAGTATGA

Protein sequence

MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPTFFRRSVSPSRIDLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGSFRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQRRRADFCPRPSRLSNMSKADDLREIPTTGSTAVTDRSSKDAESEAKHGNHIWLPLQAVVLVWLGVGRLLLSVVDSVHCRCEIVAGKLRADDYRYPFGQRGDFSKVDTEGVLEV
Homology
[Close]
BLAST of Cp4.1LG04g09150 vs. NCBI nr
Match: KAG7021750.1 (hypothetical protein SDJN02_15477, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 414 bits (1065), Expect = 3.74e-143
Identity = 241/298 (80.87%), Postives = 248/298 (83.22%), Query Frame = 0 

Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPTFFRRSVSPSR 60
           MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPTFFRRSVSPSR
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPTFFRRSVSPSR 60

Query: 61  IDLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS 120
           I+LQPSSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS
Sbjct: 61  INLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS 120

Query: 121 FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR 180
           FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR
Sbjct: 121 FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR 180

Query: 181 RRADFCPRPSRLSNMSKADDLREIPTTGSTAVTDRSSKDAESEAKHGNHIW-LPLQAVVL 240
           RRADFCPRPSRLSNMSKADDLREIPTTGSTAVTDRS +        G     L  +  + 
Sbjct: 181 RRADFCPRPSRLSNMSKADDLREIPTTGSTAVTDRSERIRNRRRSMGIISGCLSKRLFLF 240

Query: 241 VWLG-VGRLLLSVVDSVHCRCEIVAGKLRADDYRYPFGQRGDFSK----VDTEGVLEV 292
            W   V  L LS +  V  +    +  L   D R   GQRGDFSK    VDTEG  EV
Sbjct: 241 GWASAVSFLPLSTLSIVGVKLWPESCVLMITDIR-SVGQRGDFSKMHLQVDTEGTFEV 297

[Close]
BLAST of Cp4.1LG04g09150 vs. NCBI nr
Match: XP_023530348.1 (uncharacterized protein LOC111792947 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 374 bits (959), Expect = 1.67e-128
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0 

Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPTFFRRSVSPSR 60
           MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPTFFRRSVSPSR
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPTFFRRSVSPSR 60

Query: 61  IDLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS 120
           IDLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS
Sbjct: 61  IDLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS 120

Query: 121 FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR 180
           FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR
Sbjct: 121 FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR 180

Query: 181 RRADFCPRPSRLSNMSKADDL 201
           RRADFCPRPSRLSNMSKADDL
Sbjct: 181 RRADFCPRPSRLSNMSKADDL 201

[Close]
BLAST of Cp4.1LG04g09150 vs. NCBI nr
Match: XP_022933728.1 (uncharacterized protein LOC111441057 [Cucurbita moschata] >KAG6587861.1 hypothetical protein SDJN03_16426, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 372 bits (954), Expect = 9.63e-128
Identity = 200/201 (99.50%), Postives = 201/201 (100.00%), Query Frame = 0 

Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPTFFRRSVSPSR 60
           MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPTFFRRSVSPSR
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPTFFRRSVSPSR 60

Query: 61  IDLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS 120
           I+LQPSSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS
Sbjct: 61  INLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS 120

Query: 121 FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR 180
           FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR
Sbjct: 121 FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR 180

Query: 181 RRADFCPRPSRLSNMSKADDL 201
           RRADFCPRPSRLSNMSKADDL
Sbjct: 181 RRADFCPRPSRLSNMSKADDL 201

[Close]
BLAST of Cp4.1LG04g09150 vs. NCBI nr
Match: XP_022966156.1 (uncharacterized protein LOC111465917 [Cucurbita maxima])

HSP 1 Score: 368 bits (945), Expect = 2.26e-126
Identity = 199/201 (99.00%), Postives = 200/201 (99.50%), Query Frame = 0 

Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPTFFRRSVSPSR 60
           MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPTFFRRSVSPSR
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPTFFRRSVSPSR 60

Query: 61  IDLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS 120
           I+LQPSSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS
Sbjct: 61  INLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS 120

Query: 121 FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR 180
           FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR
Sbjct: 121 FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR 180

Query: 181 RRADFCPRPSRLSNMSKADDL 201
           RRADFCPR SRLSNMSKADDL
Sbjct: 181 RRADFCPRRSRLSNMSKADDL 201

[Close]
BLAST of Cp4.1LG04g09150 vs. NCBI nr
Match: XP_038879100.1 (uncharacterized serine-rich protein C215.13-like [Benincasa hispida])

HSP 1 Score: 331 bits (848), Expect = 1.44e-111
Identity = 187/204 (91.67%), Postives = 193/204 (94.61%), Query Frame = 0 

Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSS-AFASSTSSFSTRNPT-FFRRSVSP 60
           MAVSSRKSSGPVLRSLSPSGRFYGSYSSS SS SS AFASS+SSFSTRNPT FFRRSVSP
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSSSSSSSSAFASSSSSFSTRNPTSFFRRSVSP 60

Query: 61  SRIDLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGN-QVVKRQSNQKRTCMCSPTTH 120
           SR++LQ SSSPSASSV FSLDRSISPNRPISV +R SGN QVVK+QSNQKRTCMCSPTTH
Sbjct: 61  SRVNLQGSSSPSASSVSFSLDRSISPNRPISVLSRTSGNHQVVKKQSNQKRTCMCSPTTH 120

Query: 121 PGSFRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSH 180
           PGSFRCSLHKGV SQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLV+RALASLIRPSSH
Sbjct: 121 PGSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVRRALASLIRPSSH 180

Query: 181 SQRRRADFCPRPSRLSNMSKADDL 201
           SQRRRADFCPRPSRLS MSKADDL
Sbjct: 181 SQRRRADFCPRPSRLSIMSKADDL 204

[Close]
BLAST of Cp4.1LG04g09150 vs. ExPASy TrEMBL
Match: A0A6J1F5M8 (uncharacterized protein LOC111441057 OS=Cucurbita moschata OX=3662 GN=LOC111441057 PE=4 SV=1)

HSP 1 Score: 372 bits (954), Expect = 4.66e-128
Identity = 200/201 (99.50%), Postives = 201/201 (100.00%), Query Frame = 0 

Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPTFFRRSVSPSR 60
           MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPTFFRRSVSPSR
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPTFFRRSVSPSR 60

Query: 61  IDLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS 120
           I+LQPSSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS
Sbjct: 61  INLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS 120

Query: 121 FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR 180
           FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR
Sbjct: 121 FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR 180

Query: 181 RRADFCPRPSRLSNMSKADDL 201
           RRADFCPRPSRLSNMSKADDL
Sbjct: 181 RRADFCPRPSRLSNMSKADDL 201

[Close]
BLAST of Cp4.1LG04g09150 vs. ExPASy TrEMBL
Match: A0A6J1HNK6 (uncharacterized protein LOC111465917 OS=Cucurbita maxima OX=3661 GN=LOC111465917 PE=4 SV=1)

HSP 1 Score: 368 bits (945), Expect = 1.09e-126
Identity = 199/201 (99.00%), Postives = 200/201 (99.50%), Query Frame = 0 

Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPTFFRRSVSPSR 60
           MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPTFFRRSVSPSR
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPTFFRRSVSPSR 60

Query: 61  IDLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS 120
           I+LQPSSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS
Sbjct: 61  INLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPTTHPGS 120

Query: 121 FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR 180
           FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR
Sbjct: 121 FRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQR 180

Query: 181 RRADFCPRPSRLSNMSKADDL 201
           RRADFCPR SRLSNMSKADDL
Sbjct: 181 RRADFCPRRSRLSNMSKADDL 201

[Close]
BLAST of Cp4.1LG04g09150 vs. ExPASy TrEMBL
Match: A0A0A0LW36 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G264020 PE=4 SV=1)

HSP 1 Score: 322 bits (825), Expect = 2.12e-108
Identity = 181/203 (89.16%), Postives = 188/203 (92.61%), Query Frame = 0 

Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPT-FFRRSVSPS 60
           MAVSSRKSSGPVLRSLSPSGRFYGS SS  SS SSAFASSTSSFSTRN T FF RSVSPS
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSCSSYSSSSSSAFASSTSSFSTRNATSFFPRSVSPS 60

Query: 61  RIDLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGN-QVVKRQSNQKRTCMCSPTTHP 120
           R++LQ SSSPSASSVRFSLDRSISPNRPISV +R SGN QVVK+QS QKRTCMCSPTTHP
Sbjct: 61  RVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRASGNHQVVKKQSQQKRTCMCSPTTHP 120

Query: 121 GSFRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHS 180
           GSFRCSLHKGV SQPSTPYSSNRLNARRSAMTNSLVRIGGVEGD+++RALASLIRPSSHS
Sbjct: 121 GSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180

Query: 181 QRRRADFCPRPSRLSNMSKADDL 201
           QRRR DFCPRPSRLS MSKADDL
Sbjct: 181 QRRRVDFCPRPSRLSIMSKADDL 203

[Close]
BLAST of Cp4.1LG04g09150 vs. ExPASy TrEMBL
Match: A0A6J1JI11 (uncharacterized serine-rich protein C215.13-like OS=Cucurbita maxima OX=3661 GN=LOC111485282 PE=4 SV=1)

HSP 1 Score: 320 bits (821), Expect = 9.88e-108
Identity = 181/207 (87.44%), Postives = 188/207 (90.82%), Query Frame = 0 

Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSS-----AFASSTSSFSTRNPT-FFRR 60
           MAVSSRKSSGP +RSLSPSGRF G YSSS SS SS     AFASSTSSFST NPT FFRR
Sbjct: 1   MAVSSRKSSGPAMRSLSPSGRFCGFYSSSSSSSSSSSSSSAFASSTSSFSTENPTSFFRR 60

Query: 61  SVSPSRIDLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSP 120
           S+SPSR+ LQ SSS SASSVRF+LDRSISPNR ISV TR SGNQVVKRQSNQKRTC+CSP
Sbjct: 61  SLSPSRVHLQGSSSTSASSVRFALDRSISPNRHISVLTRGSGNQVVKRQSNQKRTCLCSP 120

Query: 121 TTHPGSFRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRP 180
           TTHPGSFRCSLHKGVPSQP+TPYSSNRLNARRSAMTNSLVRIGGVEGDLV+RALASLIRP
Sbjct: 121 TTHPGSFRCSLHKGVPSQPTTPYSSNRLNARRSAMTNSLVRIGGVEGDLVRRALASLIRP 180

Query: 181 SSHSQRRRADFCPRPSRLSNMSKADDL 201
           SSHSQRRRADFCPRPSRLS MSKADDL
Sbjct: 181 SSHSQRRRADFCPRPSRLSIMSKADDL 207

[Close]
BLAST of Cp4.1LG04g09150 vs. ExPASy TrEMBL
Match: A0A6J1C124 (uncharacterized protein DDB_G0271670-like OS=Momordica charantia OX=3673 GN=LOC111007469 PE=4 SV=1)

HSP 1 Score: 319 bits (818), Expect = 2.73e-107
Identity = 181/206 (87.86%), Postives = 188/206 (91.26%), Query Frame = 0 

Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSS----AFASSTSSFSTRNPT-FFRRS 60
           MAVSSRKSSGPVLRSLSPSGRFY SYSSS SS SS    AFASSTS+FSTRN T FFRRS
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYASYSSSSSSSSSSSSSAFASSTSTFSTRNATSFFRRS 60

Query: 61  VSPSRIDLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSPT 120
            SP+R++LQ SSSPSASSVRFSLDRSISPNRP+SV TR SG+QVVKRQ NQKRTCMCSPT
Sbjct: 61  TSPTRVNLQGSSSPSASSVRFSLDRSISPNRPLSVLTRSSGSQVVKRQGNQKRTCMCSPT 120

Query: 121 THPGSFRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPS 180
           THPGSFRCSLHKG PSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPS
Sbjct: 121 THPGSFRCSLHKGHPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPS 180

Query: 181 SHSQRRRADFCPRPSRLSNMSKADDL 201
           SHSQRRRADF PR SRLS MSKA+DL
Sbjct: 181 SHSQRRRADFRPRQSRLSIMSKAEDL 206

[Close]
BLAST of Cp4.1LG04g09150 vs. TAIR 10
Match: AT5G11090.1 (serine-rich protein-related )

HSP 1 Score: 180.6 bits (457), Expect = 1.8e-45
Identity = 125/216 (57.87%), Postives = 149/216 (68.98%), Query Frame = 0 

Query: 4   SSRKSSGPVLRSLSPSGRFYGSYSSSM-SSGSSAFASST-SSFSTRNPTFF--------- 63
           S  KS+GPVLRS SPSGRF G YS ++ SS SSAFASST SSFS+ +  FF         
Sbjct: 6   SRTKSNGPVLRSQSPSGRFCGGYSRAVPSSSSSAFASSTSSSFSSPSSAFFSNHRHHESN 65

Query: 64  ---RRSVSPSRIDLQPSSSPSASSVRFSLD-RSISP-NRPISVSTRISGNQVVKRQSNQK 123
               RS SP+R++L  ++ P + S R+SLD RSISP N+ ISVS     NQ         
Sbjct: 66  HSHHRSASPTRVNLY-TAQPMSQSFRYSLDSRSISPTNKSISVSK----NQPPSHNHKIS 125

Query: 124 RTCMCSPTTHPGSFRCSLHKGVPS---QPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLV 183
           R CMCSPTTHPGSFRCSLHK V +   Q +  Y++N LN RRSAMTNSLVRIGGVEG+ V
Sbjct: 126 RRCMCSPTTHPGSFRCSLHKNVANPHGQGTASYTTNGLNMRRSAMTNSLVRIGGVEGEWV 185

Query: 184 KRALASLIRPSSHSQRRRADFCPRPSRLSNMSKADD 201
           +RAL +LIRPSSH  +RRA + PRPSRLS M+KAD+
Sbjct: 186 RRALTTLIRPSSHHLKRRAAYQPRPSRLSIMAKADE 216

[Close]
BLAST of Cp4.1LG04g09150 vs. TAIR 10
Match: AT5G25280.1 (serine-rich protein-related )

HSP 1 Score: 172.6 bits (436), Expect = 4.8e-43
Identity = 117/216 (54.17%), Postives = 148/216 (68.52%), Query Frame = 0 

Query: 4   SSRKSSGPVLRSLSPSGRFYGSYSSSM---SSGSSAFASST-SSFSTRNPTFF------- 63
           ++R +    LRS SPSGRF G YS+ M   S  SS FASST SSFS+ +  FF       
Sbjct: 8   TTRSNGSASLRSKSPSGRFCGVYSNRMPSSSPSSSGFASSTSSSFSSPSTAFFSSHNQNN 67

Query: 64  ---RRSVSPSRIDLQPSSSPSASSVRFSLD-RSISPNRPISVSTRISGNQVVKRQSNQKR 123
               RS SP+R++L  +S+P   S R+S+D RSISPNR I+VS+    N    +  + +R
Sbjct: 68  HHQHRSASPTRVNLF-TSAPMTQSFRYSIDNRSISPNRSIAVSSNKPSNH--HKIPDSRR 127

Query: 124 TCMCSPTTHPGSFRCSLHKGVPS---QPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVK 183
            CMCSPTTHPGSFRCSLHK V +   Q +  Y++N LN RRSAMTNSLVRIGGVEG+ V+
Sbjct: 128 RCMCSPTTHPGSFRCSLHKNVANPHGQGTASYTTNGLNMRRSAMTNSLVRIGGVEGEWVR 187

Query: 184 RALASLIRPSSHSQRRRADFCPRPSRLSNMSKADDL 202
           RAL +LIRPSSH  +RR+ + PR SRL++MSKA+DL
Sbjct: 188 RALTTLIRPSSHQLKRRSAYEPRRSRLASMSKAEDL 220

[Close]
BLAST of Cp4.1LG04g09150 vs. TAIR 10
Match: AT5G25280.2 (serine-rich protein-related )

HSP 1 Score: 172.6 bits (436), Expect = 4.8e-43
Identity = 117/216 (54.17%), Postives = 148/216 (68.52%), Query Frame = 0 

Query: 4   SSRKSSGPVLRSLSPSGRFYGSYSSSM---SSGSSAFASST-SSFSTRNPTFF------- 63
           ++R +    LRS SPSGRF G YS+ M   S  SS FASST SSFS+ +  FF       
Sbjct: 8   TTRSNGSASLRSKSPSGRFCGVYSNRMPSSSPSSSGFASSTSSSFSSPSTAFFSSHNQNN 67

Query: 64  ---RRSVSPSRIDLQPSSSPSASSVRFSLD-RSISPNRPISVSTRISGNQVVKRQSNQKR 123
               RS SP+R++L  +S+P   S R+S+D RSISPNR I+VS+    N    +  + +R
Sbjct: 68  HHQHRSASPTRVNLF-TSAPMTQSFRYSIDNRSISPNRSIAVSSNKPSNH--HKIPDSRR 127

Query: 124 TCMCSPTTHPGSFRCSLHKGVPS---QPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVK 183
            CMCSPTTHPGSFRCSLHK V +   Q +  Y++N LN RRSAMTNSLVRIGGVEG+ V+
Sbjct: 128 RCMCSPTTHPGSFRCSLHKNVANPHGQGTASYTTNGLNMRRSAMTNSLVRIGGVEGEWVR 187

Query: 184 RALASLIRPSSHSQRRRADFCPRPSRLSNMSKADDL 202
           RAL +LIRPSSH  +RR+ + PR SRL++MSKA+DL
Sbjct: 188 RALTTLIRPSSHQLKRRSAYEPRRSRLASMSKAEDL 220

[Close]
BLAST of Cp4.1LG04g09150 vs. TAIR 10
Match: AT5G20370.1 (serine-rich protein-related )

HSP 1 Score: 74.3 bits (181), Expect = 1.8e-13
Identity = 47/109 (43.12%), Postives = 61/109 (55.96%), Query Frame = 0 

Query: 100 VKRQSNQKRTCMCSPTTHPGSFRCSLHKGVPSQPSTPYSS------NR----------LN 159
           V      KR C+CSPTTHPGSFRCS H+ +  + S   +S      NR          LN
Sbjct: 61  VSSNHQTKRKCLCSPTTHPGSFRCSFHRRLEHEKSKTLASSTVKRNNRGDNTIRVNVGLN 120

Query: 160 ARRSAMTNSLVRIGGVEGDLVKRAL-ASLIRPSSHSQRRRADFCPRPSR 192
            R+ A+ NSL +IG VE +  +R+L A+L +PSS    RR +F PR SR
Sbjct: 121 LRKLALMNSLAKIGSVEAERFRRSLAANLAKPSSLHSHRRPEFRPRLSR 169

[Close]
BLAST of Cp4.1LG04g09150 vs. TAIR 10
Match: AT1G67910.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1); Has 167 Blast hits to 167 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 46.2 bits (108), Expect = 5.2e-05
Identity = 19/38 (50.00%), Postives = 29/38 (76.32%), Query Frame = 0 

Query: 96  GNQVVKRQSNQKRT-CMCSPTTHPGSFRCSLHKGVPSQ 133
           G++ + RQ++  +T C+CSPTTHPGSFRC +H+ +  Q
Sbjct: 29  GSRGLSRQTSMTKTNCLCSPTTHPGSFRCRIHRSLSLQ 66

The following BLAST results are available for this feature:
BLAST of Cp4.1LG04g09150 vs.
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG04g09150 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7021750.13.74e-14380.87hypothetical protein SDJN02_15477, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_023530348.11.67e-128100.00uncharacterized protein LOC111792947 [Cucurbita pepo subsp. pepo][more]
XP_022933728.19.63e-12899.50uncharacterized protein LOC111441057 [Cucurbita moschata] >KAG6587861.1 hypothet... [more]
XP_022966156.12.26e-12699.00uncharacterized protein LOC111465917 [Cucurbita maxima][more]
XP_038879100.11.44e-11191.67uncharacterized serine-rich protein C215.13-like [Benincasa hispida][more]
BLAST of Cp4.1LG04g09150 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1F5M84.66e-12899.50uncharacterized protein LOC111441057 OS=Cucurbita moschata OX=3662 GN=LOC1114410... [more]
A0A6J1HNK61.09e-12699.00uncharacterized protein LOC111465917 OS=Cucurbita maxima OX=3661 GN=LOC111465917... [more]
A0A0A0LW362.12e-10889.16Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G264020 PE=4 SV=1[more]
A0A6J1JI119.88e-10887.44uncharacterized serine-rich protein C215.13-like OS=Cucurbita maxima OX=3661 GN=... [more]
A0A6J1C1242.73e-10787.86uncharacterized protein DDB_G0271670-like OS=Momordica charantia OX=3673 GN=LOC1... [more]
BLAST of Cp4.1LG04g09150 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G11090.11.8e-4557.87serine-rich protein-related [more]
AT5G25280.14.8e-4354.17serine-rich protein-related [more]
AT5G25280.24.8e-4354.17serine-rich protein-related [more]
AT5G20370.11.8e-1343.12serine-rich protein-related [more]
AT1G67910.15.2e-0550.00unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..79
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 179..220
NoneNo IPR availablePANTHERPTHR33132OSJNBB0118P14.9 PROTEINcoord: 1..201
NoneNo IPR availablePANTHERPTHR33132:SF75SUBFAMILY NOT NAMEDcoord: 1..201

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g09150.1Cp4.1LG04g09150.1mRNA