Cp4.1LG04g09130 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGCCGAGATCATTGAATGTAGGAGGTCTTGTATTTGTAGTTTACATGTTGATGTTAGTGCCAACGGCAGTAGCCCGCATGGGGGCGGTGGCAGAGGTGCCAAAGGATATCCCACTGAATGACTGCACGACCTTTGTTTCAGAGTCGGCCAAGTGTATGACTGATGTGTTCACTAATGCTGCTGCTCCTCATCCTTCTTGTTGCCAAGCCTTTGCTGAGCTCAACCAATGTTCCCCTCAGCTTCTCAAAGCCATTCCCCCGGTTAGCTTGGATCTCATCAGGAAAGTTTGTGAATTGATGGGCGTTTCAATTCCTTAG ATGGCGCCGAGATCATTGAATGTAGGAGGTCTTGTATTTGTAGTTTACATGTTGATGTTAGTGCCAACGGCAGTAGCCCGCATGGGGGCGGTGGCAGAGGTGCCAAAGGATATCCCACTGAATGACTGCACGACCTTTGTTTCAGAGTCGGCCAAGTGTATGACTGATGTGTTCACTAATGCTGCTGCTCCTCATCCTTCTTGTTGCCAAGCCTTTGCTGAGCTCAACCAATGTTCCCCTCAGCTTCTCAAAGCCATTCCCCCGGTTAGCTTGGATCTCATCAGGAAAGTTTGTGAATTGATGGGCGTTTCAATTCCTTAG ATGGCGCCGAGATCATTGAATGTAGGAGGTCTTGTATTTGTAGTTTACATGTTGATGTTAGTGCCAACGGCAGTAGCCCGCATGGGGGCGGTGGCAGAGGTGCCAAAGGATATCCCACTGAATGACTGCACGACCTTTGTTTCAGAGTCGGCCAAGTGTATGACTGATGTGTTCACTAATGCTGCTGCTCCTCATCCTTCTTGTTGCCAAGCCTTTGCTGAGCTCAACCAATGTTCCCCTCAGCTTCTCAAAGCCATTCCCCCGGTTAGCTTGGATCTCATCAGGAAAGTTTGTGAATTGATGGGCGTTTCAATTCCTTAG MAPRSLNVGGLVFVVYMLMLVPTAVARMGAVAEVPKDIPLNDCTTFVSESAKCMTDVFTNAAAPHPSCCQAFAELNQCSPQLLKAIPPVSLDLIRKVCELMGVSIP Homology
BLAST of Cp4.1LG04g09130 vs. NCBI nr
Match: KAG6587866.1 (hypothetical protein SDJN03_16431, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 199 bits (507), Expect = 3.17e-64 Identity = 100/106 (94.34%), Postives = 103/106 (97.17%), Query Frame = 0
BLAST of Cp4.1LG04g09130 vs. NCBI nr
Match: TYK10330.1 (hypothetical protein E5676_scaffold367G00010 [Cucumis melo var. makuwa]) HSP 1 Score: 91.7 bits (226), Expect = 1.87e-21 Identity = 46/97 (47.42%), Postives = 63/97 (64.95%), Query Frame = 0
BLAST of Cp4.1LG04g09130 vs. NCBI nr
Match: KAA0050078.1 (hypothetical protein E6C27_scaffold675G00620 [Cucumis melo var. makuwa]) HSP 1 Score: 90.5 bits (223), Expect = 5.33e-21 Identity = 48/99 (48.48%), Postives = 63/99 (63.64%), Query Frame = 0
BLAST of Cp4.1LG04g09130 vs. NCBI nr
Match: KAE8653021.1 (hypothetical protein Csa_004567 [Cucumis sativus]) HSP 1 Score: 86.7 bits (213), Expect = 1.75e-19 Identity = 44/97 (45.36%), Postives = 62/97 (63.92%), Query Frame = 0
BLAST of Cp4.1LG04g09130 vs. NCBI nr
Match: KAA0050065.1 (hypothetical protein E6C27_scaffold675G00460 [Cucumis melo var. makuwa]) HSP 1 Score: 82.0 bits (201), Expect = 1.25e-17 Identity = 39/76 (51.32%), Postives = 50/76 (65.79%), Query Frame = 0
BLAST of Cp4.1LG04g09130 vs. ExPASy TrEMBL
Match: A0A5D3CG41 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00010 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 9.05e-22 Identity = 46/97 (47.42%), Postives = 63/97 (64.95%), Query Frame = 0
BLAST of Cp4.1LG04g09130 vs. ExPASy TrEMBL
Match: A0A5A7U483 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00620 PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 2.58e-21 Identity = 48/99 (48.48%), Postives = 63/99 (63.64%), Query Frame = 0
BLAST of Cp4.1LG04g09130 vs. ExPASy TrEMBL
Match: A0A5A7U8Y3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00460 PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 6.05e-18 Identity = 39/76 (51.32%), Postives = 50/76 (65.79%), Query Frame = 0
BLAST of Cp4.1LG04g09130 vs. ExPASy TrEMBL
Match: A0A5D3CEQ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00180 PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 8.57e-18 Identity = 37/69 (53.62%), Postives = 48/69 (69.57%), Query Frame = 0
BLAST of Cp4.1LG04g09130 vs. ExPASy TrEMBL
Match: A0A5A7U9A1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00160 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 2.50e-17 Identity = 45/108 (41.67%), Postives = 66/108 (61.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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