Cp4.1LG04g09130 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG04g09130
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionUnknown protein
LocationCp4.1LG04: 10269850 .. 10270170 (-)
RNA-Seq ExpressionCp4.1LG04g09130
SyntenyCp4.1LG04g09130
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGCCGAGATCATTGAATGTAGGAGGTCTTGTATTTGTAGTTTACATGTTGATGTTAGTGCCAACGGCAGTAGCCCGCATGGGGGCGGTGGCAGAGGTGCCAAAGGATATCCCACTGAATGACTGCACGACCTTTGTTTCAGAGTCGGCCAAGTGTATGACTGATGTGTTCACTAATGCTGCTGCTCCTCATCCTTCTTGTTGCCAAGCCTTTGCTGAGCTCAACCAATGTTCCCCTCAGCTTCTCAAAGCCATTCCCCCGGTTAGCTTGGATCTCATCAGGAAAGTTTGTGAATTGATGGGCGTTTCAATTCCTTAG

mRNA sequence

ATGGCGCCGAGATCATTGAATGTAGGAGGTCTTGTATTTGTAGTTTACATGTTGATGTTAGTGCCAACGGCAGTAGCCCGCATGGGGGCGGTGGCAGAGGTGCCAAAGGATATCCCACTGAATGACTGCACGACCTTTGTTTCAGAGTCGGCCAAGTGTATGACTGATGTGTTCACTAATGCTGCTGCTCCTCATCCTTCTTGTTGCCAAGCCTTTGCTGAGCTCAACCAATGTTCCCCTCAGCTTCTCAAAGCCATTCCCCCGGTTAGCTTGGATCTCATCAGGAAAGTTTGTGAATTGATGGGCGTTTCAATTCCTTAG

Coding sequence (CDS)

ATGGCGCCGAGATCATTGAATGTAGGAGGTCTTGTATTTGTAGTTTACATGTTGATGTTAGTGCCAACGGCAGTAGCCCGCATGGGGGCGGTGGCAGAGGTGCCAAAGGATATCCCACTGAATGACTGCACGACCTTTGTTTCAGAGTCGGCCAAGTGTATGACTGATGTGTTCACTAATGCTGCTGCTCCTCATCCTTCTTGTTGCCAAGCCTTTGCTGAGCTCAACCAATGTTCCCCTCAGCTTCTCAAAGCCATTCCCCCGGTTAGCTTGGATCTCATCAGGAAAGTTTGTGAATTGATGGGCGTTTCAATTCCTTAG

Protein sequence

MAPRSLNVGGLVFVVYMLMLVPTAVARMGAVAEVPKDIPLNDCTTFVSESAKCMTDVFTNAAAPHPSCCQAFAELNQCSPQLLKAIPPVSLDLIRKVCELMGVSIP
Homology
BLAST of Cp4.1LG04g09130 vs. NCBI nr
Match: KAG6587866.1 (hypothetical protein SDJN03_16431, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 199 bits (507), Expect = 3.17e-64
Identity = 100/106 (94.34%), Postives = 103/106 (97.17%), Query Frame = 0

Query: 1   MAPRSLNVGGLVFVVYMLMLVPTAVARMGAVAEVPKDIPLNDCTTFVSESAKCMTDVFTN 60
           MAPRSLNV GLVFVVYM MLVPTAVARMGAVA+V KD+PLNDCTTFVSESAKCMTDVFTN
Sbjct: 1   MAPRSLNVAGLVFVVYMFMLVPTAVARMGAVAQVAKDMPLNDCTTFVSESAKCMTDVFTN 60

Query: 61  AAAPHPSCCQAFAELNQCSPQLLKAIPPVSLDLIRKVCELMGVSIP 106
           AAAPHPSCCQAFAELNQCSPQLLKAIPPV+LDLIRKVCELMGVSIP
Sbjct: 61  AAAPHPSCCQAFAELNQCSPQLLKAIPPVTLDLIRKVCELMGVSIP 106

BLAST of Cp4.1LG04g09130 vs. NCBI nr
Match: TYK10330.1 (hypothetical protein E5676_scaffold367G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 91.7 bits (226), Expect = 1.87e-21
Identity = 46/97 (47.42%), Postives = 63/97 (64.95%), Query Frame = 0

Query: 11  LVFVVYMLMLVPTAVARMGAVAE----VPKDIPLNDCTTFVSESAKCMTDVFTNAAAPHP 70
           LVF V M +L  + +A  GA A       +++ L  CT+F+SE+ KC+ DV  NA APHP
Sbjct: 8   LVFFVCMAILAVSGIAHTGAAAPSDPFTAEELSLLGCTSFISEATKCVIDVMKNAVAPHP 67

Query: 71  SCCQAFAELNQCSPQLLKAIPPVSLDLIRKVCELMGV 103
           SCC+AF++LN CSP+ LK IP   + LI+ +C L GV
Sbjct: 68  SCCKAFSKLNDCSPEFLKGIPSADMILIKGICALWGV 104

BLAST of Cp4.1LG04g09130 vs. NCBI nr
Match: KAA0050078.1 (hypothetical protein E6C27_scaffold675G00620 [Cucumis melo var. makuwa])

HSP 1 Score: 90.5 bits (223), Expect = 5.33e-21
Identity = 48/99 (48.48%), Postives = 63/99 (63.64%), Query Frame = 0

Query: 11  LVFVVYMLMLVPTAVARMGAVAEVPKD------IPLNDCTTFVSESAKCMTDVFTNAAAP 70
           LVF V M +L  + +A  GA A  P D      + L  CT+F+SE+ KC+ DV  NA AP
Sbjct: 8   LVFFVCMAILAVSGIAHTGAAA--PSDPFTAEKLSLLGCTSFISEATKCVIDVMKNAVAP 67

Query: 71  HPSCCQAFAELNQCSPQLLKAIPPVSLDLIRKVCELMGV 103
           HPSCC+AF++LN CSP+ LK IP   + LI+ +C L GV
Sbjct: 68  HPSCCKAFSKLNDCSPEFLKGIPSADMILIKGICALWGV 104

BLAST of Cp4.1LG04g09130 vs. NCBI nr
Match: KAE8653021.1 (hypothetical protein Csa_004567 [Cucumis sativus])

HSP 1 Score: 86.7 bits (213), Expect = 1.75e-19
Identity = 44/97 (45.36%), Postives = 62/97 (63.92%), Query Frame = 0

Query: 11  LVFVVYMLMLVPTAVARMGAVAEVP----KDIPLNDCTTFVSESAKCMTDVFTNAAAPHP 70
           LVF+V + +L  + +A  GA+A       ++  L  CT+F+SE+  CM DV  NA APHP
Sbjct: 8   LVFLVCIAILAVSGMAHTGALAPADPFTAEEFSLLGCTSFISEATNCMVDVMKNAVAPHP 67

Query: 71  SCCQAFAELNQCSPQLLKAIPPVSLDLIRKVCELMGV 103
           SCC+AF++LN CS + LK IP   + LI+ +C L GV
Sbjct: 68  SCCKAFSKLNDCSSEFLKGIPSADMILIKGICALWGV 104

BLAST of Cp4.1LG04g09130 vs. NCBI nr
Match: KAA0050065.1 (hypothetical protein E6C27_scaffold675G00460 [Cucumis melo var. makuwa])

HSP 1 Score: 82.0 bits (201), Expect = 1.25e-17
Identity = 39/76 (51.32%), Postives = 50/76 (65.79%), Query Frame = 0

Query: 30  AVAEVPKDIPLNDCTTFVSESAKCMTDVFTNAAAPHPSCCQAFAELNQCSPQLLKAIPPV 89
           A A    DI L  C +FV ++ +C+ DV  NA APHPSCCQA +EL+ CS Q LK IP V
Sbjct: 31  AAAAPEGDISLFPCKSFVPKATECVIDVLKNAVAPHPSCCQAISELHDCSSQFLKDIPSV 90

Query: 90  SLDLIRKVCELMGVSI 105
            + L++ +C L GVSI
Sbjct: 91  DMILVKSICALWGVSI 106

BLAST of Cp4.1LG04g09130 vs. ExPASy TrEMBL
Match: A0A5D3CG41 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00010 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 9.05e-22
Identity = 46/97 (47.42%), Postives = 63/97 (64.95%), Query Frame = 0

Query: 11  LVFVVYMLMLVPTAVARMGAVAE----VPKDIPLNDCTTFVSESAKCMTDVFTNAAAPHP 70
           LVF V M +L  + +A  GA A       +++ L  CT+F+SE+ KC+ DV  NA APHP
Sbjct: 8   LVFFVCMAILAVSGIAHTGAAAPSDPFTAEELSLLGCTSFISEATKCVIDVMKNAVAPHP 67

Query: 71  SCCQAFAELNQCSPQLLKAIPPVSLDLIRKVCELMGV 103
           SCC+AF++LN CSP+ LK IP   + LI+ +C L GV
Sbjct: 68  SCCKAFSKLNDCSPEFLKGIPSADMILIKGICALWGV 104

BLAST of Cp4.1LG04g09130 vs. ExPASy TrEMBL
Match: A0A5A7U483 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00620 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.58e-21
Identity = 48/99 (48.48%), Postives = 63/99 (63.64%), Query Frame = 0

Query: 11  LVFVVYMLMLVPTAVARMGAVAEVPKD------IPLNDCTTFVSESAKCMTDVFTNAAAP 70
           LVF V M +L  + +A  GA A  P D      + L  CT+F+SE+ KC+ DV  NA AP
Sbjct: 8   LVFFVCMAILAVSGIAHTGAAA--PSDPFTAEKLSLLGCTSFISEATKCVIDVMKNAVAP 67

Query: 71  HPSCCQAFAELNQCSPQLLKAIPPVSLDLIRKVCELMGV 103
           HPSCC+AF++LN CSP+ LK IP   + LI+ +C L GV
Sbjct: 68  HPSCCKAFSKLNDCSPEFLKGIPSADMILIKGICALWGV 104

BLAST of Cp4.1LG04g09130 vs. ExPASy TrEMBL
Match: A0A5A7U8Y3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00460 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 6.05e-18
Identity = 39/76 (51.32%), Postives = 50/76 (65.79%), Query Frame = 0

Query: 30  AVAEVPKDIPLNDCTTFVSESAKCMTDVFTNAAAPHPSCCQAFAELNQCSPQLLKAIPPV 89
           A A    DI L  C +FV ++ +C+ DV  NA APHPSCCQA +EL+ CS Q LK IP V
Sbjct: 31  AAAAPEGDISLFPCKSFVPKATECVIDVLKNAVAPHPSCCQAISELHDCSSQFLKDIPSV 90

Query: 90  SLDLIRKVCELMGVSI 105
            + L++ +C L GVSI
Sbjct: 91  DMILVKSICALWGVSI 106

BLAST of Cp4.1LG04g09130 vs. ExPASy TrEMBL
Match: A0A5D3CEQ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00180 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 8.57e-18
Identity = 37/69 (53.62%), Postives = 48/69 (69.57%), Query Frame = 0

Query: 37  DIPLNDCTTFVSESAKCMTDVFTNAAAPHPSCCQAFAELNQCSPQLLKAIPPVSLDLIRK 96
           DI L  C +FV ++ +C+ DV  NA APHPSCCQA +EL+ CS Q LK IP V + L++ 
Sbjct: 38  DISLFPCKSFVPKATECVIDVLKNAVAPHPSCCQAISELHDCSSQFLKDIPSVDMILVKS 97

Query: 97  VCELMGVSI 105
           +C L GVSI
Sbjct: 98  ICALWGVSI 106

BLAST of Cp4.1LG04g09130 vs. ExPASy TrEMBL
Match: A0A5A7U9A1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00160 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.50e-17
Identity = 45/108 (41.67%), Postives = 66/108 (61.11%), Query Frame = 0

Query: 1   MAPRSLNVGG----LVFVVYMLMLVP-TAVARMGAVA---EVPKDIPLNDCTTFVSESAK 60
           MA +SLNV      LVF+V + +L P T +A   A A    VP++ P   C  F+ E+  
Sbjct: 1   MAAQSLNVSAMKLVLVFLVCIAILAPSTTMADTTAAAPSPSVPQNFPFLKCAPFILEATL 60

Query: 61  CMTDVFTNAAAPHPSCCQAFAELNQCSPQLLKAIPPVSLDLIRKVCEL 100
           C+TDV     APHPSCC+A ++LN C+P++ + IP   +D+I+K+C L
Sbjct: 61  CVTDVIKFPIAPHPSCCKAISKLNDCAPEIYQKIPSPDMDVIKKICSL 108

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6587866.13.17e-6494.34hypothetical protein SDJN03_16431, partial [Cucurbita argyrosperma subsp. sorori... [more]
TYK10330.11.87e-2147.42hypothetical protein E5676_scaffold367G00010 [Cucumis melo var. makuwa][more]
KAA0050078.15.33e-2148.48hypothetical protein E6C27_scaffold675G00620 [Cucumis melo var. makuwa][more]
KAE8653021.11.75e-1945.36hypothetical protein Csa_004567 [Cucumis sativus][more]
KAA0050065.11.25e-1751.32hypothetical protein E6C27_scaffold675G00460 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
A0A5D3CG419.05e-2247.42Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7U4832.58e-2148.48Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7U8Y36.05e-1851.32Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3CEQ48.57e-1853.62Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7U9A12.50e-1741.67Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036312Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamilySUPERFAMILY47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 42..78

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g09130.1Cp4.1LG04g09130.1mRNA