Cp4.1LG04g09060 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG04g09060
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Defective in cullin neddylation protein
Location	Cp4.1LG04: 10345504 .. 10348308 (+)
RNA-Seq Expression	Cp4.1LG04g09060
Synteny	Cp4.1LG04g09060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCTTGGCCAAAGTGGCACCAGAAGCAAGCTCTCCGGCGTGGCCTACGCCGTCGCCGAGAGACACACCTATAACAATACCAAGTTCATCTTCGTCCCCTGTTGCTGCTGCTTTGTGGGCTCAACTCAGACAGATCGATCGTCTCTTTGATTTATTCTCCGGCTATAACCATGTCATGGAGTACGTTTATTTCTTTCAATTTCTTAATAATTTTGTTCTTCATATCCACATAATCAAAATAATTAAATTTTGATGATTTTTTTTTTTTTTTTAATAATTTCTGTGAGATCCCACGTTAATTGGGAAGGGAAACGAGTGTCAACGAGGACGCTCGCCCTGAATGAAATGGATTGTGAGATCCGGTTGGAGAGGGGAACAAAACATTTTTACAATGACGTGCAACTTTAAAGAAGACTTAAAAAGGAATAGTCTAGAAATGACAATATTTGCTAGCGGTGGACTTGATTAATGTGTGTGATTATTAATTAGTTTATGTTTATTGTTGAGCAGCCCACGTGGAATTGAGAAACTTTGCACACATTTGGAAATGAATCATTTAGATGTGAAGATATTAATGTTGGCATGGTAATTACAAAATGATTATTATTAAACTAGGGTTAAGATGTGTTAATTTAATCAAAATTAACAACATGGGTTGGTTGTATTATTATTGCATGTATCAGGAAAATGAAGGCAAAAAAGCAAGGCTACTTTCATCGGGTAAGAACAAGGCTCATGGTCTCTCTCTATATATATATATATCGAGTTTGAGGTTAATATCAATGGCGTTTGTTCCATGGTCAGGACGAGTGGCGTCGTGGCCTAAGGAAACTCAAAGTTGACAACATGGAGAAGCTCAAGAATGCACTTTTCTATCTCGAGATTGAGGTTCAAATATTGTTTTCGTCTTTGATAATTAAGCATATAAACATGCAAATCTCTTAATCGTTACATCGTTATGTGTTTTTCATAACCATGATCAAATTAAGGCAAGAATTCCACCTCACTTTGAAGACTTCTTTGCATATTCGTTCAAATATAACCTCATTGGTAAGCATTCATATGATCATGATTAGTCTATTGAGATTATTCATCAGCTAATGAAGGGATTGATCCTGGGTTTATAAGTAAGAAACACTACGAGACCTTTTGAGAAAACAAAAAATAAAGTCACGAGAGCTGATGCTCAAAGTTGATATAGATAGTAATTTAGTAATTTCTTTGGTTAAAGAGGAGAGGCGGACAAGCTTAGACGTGGAATTTCTGTGCGAGTTGCTCGAGATCGTGATGGGTCCTCTTTTCCGTCCGCAAGTTCAGTTACTAGTCGAGTTTCTCAAAGTAAAGTAATTTAATTTAAGACCCATTTGAAATAATTTTGTTTTAAGTTTGGATGAATATCATAAACCATTTGGTTTTTGCAGACCCAAACGATGTATAGAGTGCTGATCATGGATCAATGGATGAATATCTTCTACTTTTGCAACCAGGTACCCTTAATCTTTGTTTAATCATTAATTAAATCATTAATTGAATCCTTAATCTTTGTTATAGATATCTTAATTGATTACTATTTTGATGGATTGGCAGATAAAATTTCCAGGTCTTGATAACTACGATCCAAACGATGCCTGGCCGGTGATTATTGATTCCTTCGTTGAGTGGTTGAAAAGAAAGCAAGGTGAAGAAGGCACCCACCCAAGTTCCCCTCGCTAACCATCCTCATATTCAATCACATACGGTTTCATTTGAGCATCGTGTTTTTTTAGCATTTGGTTCGAGTAAATATGAACATACCTAGTCGATTAAGATACCATTTTCTTTCTTGAATCGTAGAGATACAACTAAATAATTTGATCTTAGATCGTAAAGAAAAGAAGAAAATGTGAGACAAAAGAAAAAGATGGAACCTTTCAAAGTCGTGATATACTTTGCTTTGTTGTGCTTGACTACTGTAGATGTAATGGATTTTAAAGGAAGTGGTTGAGACACTTGTTTGTCTCGGAATGCATGTGCCACAGGATAGCAAGCTACTAGGCTCAAGGGTGATGGAGAGTCAATATCATGTCTCCCCTATAATATATTTGAGGCATTTATCCTTCTCGAGTAAACGTCTTTCGACGAACGGACATACAGTCTCGTGTATAGTCCGTCGAGTATTCGTTTGACACCAAATTTGGTGAGGTTTCATCTTTCATATCAACGAACTTAATTCTCGAGTCGCATGTCAAAACTCATATCTAAACTCTAACTTTTGAGGTTATGGTCTAGGATTCTACCCAGCCCTCTTCGAACTTGTCTTCAACAGTCGTGTCACCTCATTCTCTAGAACTTTGTATATGCCTCAACTTATCATCAATGCACACTCTAGTTGTGTTGGATGATGCACCTTCCTCTTCGGTCAAATCGCGACACTTCTCAATCTTGACTTAAACACGGTTTGTTGGGCACCACTTGAGAGTCGTGTGGGGATCACAACCTACTTTCTCTCCGTGAGGTTTGCACGATGGGGACTTCGTGGATGTCTTGTTTGCTCTCAATTAGATACCACCGATTGGAAACTTTCCACAACAGCTCATTTTACTTTTATTAAATATATATACGCACTAATCTCTCTAATCTCAAATTAATTAAATAATAAAGTATGTCTAGTATTTATATTTATTTATTGACTCTCTCTATAACTTTGGGAAAGCATATGATATGAAATGAATTGACTCTCTCTCCCTGGTGATTGAACAGCAAACTCATGAACCTGAACCTTCTTGCTTTCACTCCGACTCCAGAACTAAATCACTTGTCCCTG

mRNA sequence

ATGATCTTGGCCAAAGTGGCACCAGAAGCAAGCTCTCCGGCGTGGCCTACGCCGTCGCCGAGAGACACACCTATAACAATACCAAGTTCATCTTCGTCCCCTGTTGCTGCTGCTTTGTGGGCTCAACTCAGACAGATCGATCGTCTCTTTGATTTATTCTCCGGCTATAACCATGTCATGGAGAAAATGAAGGCAAAAAAGCAAGGCTACTTTCATCGGGACGAGTGGCGTCGTGGCCTAAGGAAACTCAAAGTTGACAACATGGAGAAGCTCAAGAATGCACTTTTCTATCTCGAGATTGAGACCCAAACGATGTATAGAGTGCTGATCATGGATCAATGGATGAATATCTTCTACTTTTGCAACCAGATAAAATTTCCAGGTCTTGATAACTACGATCCAAACGATGCCTGGCCGGTGATTATTGATTCCTTCGTTGAGTGGTTGAAAAGAAAGCAAGGTGAAGAAGGCACCCACCCAAGTTCCCCTCGCTAACCATCCTCATATTCAATCACATACGGTTTCATTTGAGCATCGTGTTTTTTTAGCATTTGGTTCGAGTAAATATGAACATACCTAGTCGATTAAGATACCATTTTCTTTCTTGAATCGTAGAGATACAACTAAATAATTTGATCTTAGATCGTAAAGAAAAGAAGAAAATGTGAGACAAAAGAAAAAGATGGAACCTTTCAAAGTCGTGATATACTTTGCTTTGTTGTGCTTGACTACTGTAGATGTAATGGATTTTAAAGGAAGTGGTTGAGACACTTGTTTGTCTCGGAATGCATGTGCCACAGGATAGCAAGCTACTAGGCTCAAGGGTGATGGAGAGTCAATATCATGTCTCCCCTATAATATATTTGAGGCATTTATCCTTCTCGAGTAAACGTCTTTCGACGAACGGACATACAGTCTCGTGTATAGTCCGTCGAGTATTCGTTTGACACCAAATTTGGTGAGGTTTCATCTTTCATATCAACGAACTTAATTCTCGAGTCGCATGTCAAAACTCATATCTAAACTCTAACTTTTGAGGTTATGGTCTAGGATTCTACCCAGCCCTCTTCGAACTTGTCTTCAACAGTCGTGTCACCTCATTCTCTAGAACTTTGTATATGCCTCAACTTATCATCAATGCACACTCTAGTTGTGTTGGATGATGCACCTTCCTCTTCGGTCAAATCGCGACACTTCTCAATCTTGACTTAAACACGGTTTGTTGGGCACCACTTGAGAGTCGTGTGGGGATCACAACCTACTTTCTCTCCGTGAGGTTTGCACGATGGGGACTTCGTGGATGTCTTGTTTGCTCTCAATTAGATACCACCGATTGGAAACTTTCCACAACAGCTCATTTTACTTTTATTAAATATATATACGCACTAATCTCTCTAATCTCAAATTAATTAAATAATAAAGTATGTCTAGTATTTATATTTATTTATTGACTCTCTCTATAACTTTGGGAAAGCATATGATATGAAATGAATTGACTCTCTCTCCCTGGTGATTGAACAGCAAACTCATGAACCTGAACCTTCTTGCTTTCACTCCGACTCCAGAACTAAATCACTTGTCCCTG

Coding sequence (CDS)

ATGATCTTGGCCAAAGTGGCACCAGAAGCAAGCTCTCCGGCGTGGCCTACGCCGTCGCCGAGAGACACACCTATAACAATACCAAGTTCATCTTCGTCCCCTGTTGCTGCTGCTTTGTGGGCTCAACTCAGACAGATCGATCGTCTCTTTGATTTATTCTCCGGCTATAACCATGTCATGGAGAAAATGAAGGCAAAAAAGCAAGGCTACTTTCATCGGGACGAGTGGCGTCGTGGCCTAAGGAAACTCAAAGTTGACAACATGGAGAAGCTCAAGAATGCACTTTTCTATCTCGAGATTGAGACCCAAACGATGTATAGAGTGCTGATCATGGATCAATGGATGAATATCTTCTACTTTTGCAACCAGATAAAATTTCCAGGTCTTGATAACTACGATCCAAACGATGCCTGGCCGGTGATTATTGATTCCTTCGTTGAGTGGTTGAAAAGAAAGCAAGGTGAAGAAGGCACCCACCCAAGTTCCCCTCGCTAA

Protein sequence

MILAKVAPEASSPAWPTPSPRDTPITIPSSSSSPVAAALWAQLRQIDRLFDLFSGYNHVMEKMKAKKQGYFHRDEWRRGLRKLKVDNMEKLKNALFYLEIETQTMYRVLIMDQWMNIFYFCNQIKFPGLDNYDPNDAWPVIIDSFVEWLKRKQGEEGTHPSSPR

Homology

[Close]

BLAST of Cp4.1LG04g09060 vs. ExPASy Swiss-Prot
Match: Q92564 (DCN1-like protein 4 OS=Homo sapiens OX=9606 GN=DCUN1D4 PE=1 SV=2)

HSP 1 Score: 66.2 bits (160), Expect = 3.8e-10
Identity = 44/145 (30.34%), Postives = 58/145 (40.00%), Query Frame = 0


Query: 62  KMKAKKQGYFHRDEWRRGLRKLKVDNMEKLKNALFY------------------------ 121
           K+ A+  GYF   EW +G+  L+ D  EKL+N L Y                        
Sbjct: 147 KLDAQNMGYFTLQEWLKGMTSLQCDTTEKLRNTLDYLRSFLNDSTNFKLIYRYAFDFARE 206

Query: 122 -----LEIET------------------------QTMYRVLIMDQWMNIFYFCNQIKFPG 154
                L+I T                        Q+ Y+V+  DQW N+  F   I    
Sbjct: 207 KDQRSLDINTAKCMLGLLLGKIWPLFPVFHQFLEQSKYKVINKDQWCNVLEFSRTINL-D 266

[Close]

BLAST of Cp4.1LG04g09060 vs. ExPASy Swiss-Prot
Match: Q8CCA0 (DCN1-like protein 4 OS=Mus musculus OX=10090 GN=Dcun1d4 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.9e-09
Identity = 43/145 (29.66%), Postives = 57/145 (39.31%), Query Frame = 0


Query: 62  KMKAKKQGYFHRDEWRRGLRKLKVDNMEKLKNALFY------------------------ 121
           K+ A+  GYF   EW +G+  L+ D  EKL+  L Y                        
Sbjct: 147 KLDAQNMGYFTLQEWLKGMTSLQCDTTEKLRTTLDYLRSLLNDTTNFKLIYRYAFDFARE 206

Query: 122 -----LEIET------------------------QTMYRVLIMDQWMNIFYFCNQIKFPG 154
                L+I T                        Q+ Y+V+  DQW N+  F   I    
Sbjct: 207 KDQRSLDINTAKCMLGLLLGKIWPLFPVFHQFLEQSKYKVINKDQWCNVLEFSRTISL-D 266

[Close]

BLAST of Cp4.1LG04g09060 vs. ExPASy Swiss-Prot
Match: Q5RHX6 (DCN1-like protein 4 OS=Danio rerio OX=7955 GN=dcun1d4 PE=3 SV=2)

HSP 1 Score: 63.5 bits (153), Expect = 2.5e-09
Identity = 40/145 (27.59%), Postives = 58/145 (40.00%), Query Frame = 0


Query: 62  KMKAKKQGYFHRDEWRRGLRKLKVDNMEKLKNALFYL----------------------- 121
           K+ A+  GYF   EW +G+  L+ D+ EKL+N+L YL                       
Sbjct: 135 KLDAQSMGYFTLQEWLKGMGSLQCDSTEKLRNSLDYLRSVLNDATSFKLIYRYAFDFARE 194

Query: 122 ------------------------------EIETQTMYRVLIMDQWMNIFYFCNQIKFPG 154
                                         +   Q+ Y+V+  DQW N+  F   I    
Sbjct: 195 KDQRSLDLNTAKCMLGLLLGKTWPLFPVFNQFLEQSKYKVINKDQWCNVLEFSRTINL-D 254

[Close]

BLAST of Cp4.1LG04g09060 vs. ExPASy Swiss-Prot
Match: Q5RDF9 (DCN1-like protein 5 OS=Pongo abelii OX=9601 GN=DCUN1D5 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 9.4e-09
Identity = 40/145 (27.59%), Postives = 61/145 (42.07%), Query Frame = 0


Query: 62  KMKAKKQGYFHRDEWRRGLRKLKVDNMEKLKNALFY------------------------ 121
           K++A+  G+F ++EW +G+  L+ D  EKL+N   +                        
Sbjct: 92  KLEAESMGFFTKEEWLKGMTSLQCDCTEKLQNKFDFLRSQLNDISSFKNIYRYAFDFARD 151

Query: 122 -----LEIET------------------------QTMYRVLIMDQWMNIFYFCNQIKFPG 154
                L+I+T                        Q+ YRV+  DQW N+  F   +    
Sbjct: 152 KDQRSLDIDTAKSMLALLLGRTWPLFSVFYQYPEQSKYRVMNKDQWYNVLEFSRAV-HAD 211

[Close]

BLAST of Cp4.1LG04g09060 vs. ExPASy Swiss-Prot
Match: Q9BTE7 (DCN1-like protein 5 OS=Homo sapiens OX=9606 GN=DCUN1D5 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.2e-08
Identity = 40/146 (27.40%), Postives = 61/146 (41.78%), Query Frame = 0


Query: 62  KMKAKKQGYFHRDEWRRGLRKLKVDNMEKLKN---------------------------- 121
           K++A+  G+F ++EW +G+  L+ D  EKL+N                            
Sbjct: 92  KLEAESMGFFTKEEWLKGMTSLQCDCTEKLQNKFDFLRSQLNDISSFKNIYRYAFDFARD 151

Query: 122 --------------------------ALFYLEIETQTMYRVLIMDQWMNIFYFCNQIKFP 154
                                     ++FY  +E Q+ YRV+  DQW N+  F   +   
Sbjct: 152 KDQRSLDIDTAKSMLALLLGRTWPLFSVFYQYLE-QSKYRVMNKDQWYNVLEFSRTV-HA 211

[Close]

BLAST of Cp4.1LG04g09060 vs. NCBI nr
Match: KAG6587844.1 (DCN1-like protein 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 327 bits (839), Expect = 4.97e-113
Identity = 157/161 (97.52%), Postives = 159/161 (98.76%), Query Frame = 0


Query: 1   MILAKVAPEASSPAWPTPSPRDTPITIPSSSSSPVAAALWAQLRQIDRLFDLFSGYNHVM 60
           MILAKVAPEASSPAWPTPSPRD PITIPSSSSSPVAAALWAQLR+IDRLFDLFSGYNHVM
Sbjct: 1   MILAKVAPEASSPAWPTPSPRDIPITIPSSSSSPVAAALWAQLRRIDRLFDLFSGYNHVM 60

Query: 61  EKMKAKKQGYFHRDEWRRGLRKLKVDNMEKLKNALFYLEIETQTMYRVLIMDQWMNIFYF 120
           EKMKAKKQGYFHRDEWRRGLRKLKVDNMEKLKNALFYLEIETQTMYRVLIMDQWMNIFYF
Sbjct: 61  EKMKAKKQGYFHRDEWRRGLRKLKVDNMEKLKNALFYLEIETQTMYRVLIMDQWMNIFYF 120

Query: 121 CNQIKFPGLDNYDPNDAWPVIIDSFVEWLKRKQGEEGTHPS 161
           CNQIKFPGLDNYDPN AWPVIIDSFVEWLKRKQGE+GTHPS
Sbjct: 121 CNQIKFPGLDNYDPNHAWPVIIDSFVEWLKRKQGEDGTHPS 161

[Close]

BLAST of Cp4.1LG04g09060 vs. NCBI nr
Match: XP_023530967.1 (DCN1-like protein 5 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 292 bits (747), Expect = 1.24e-97
Identity = 159/242 (65.70%), Postives = 160/242 (66.12%), Query Frame = 0


Query: 4   AKVAPEASSPAWPTPSPRDTPITIPSSSSSPVAAALWAQLRQIDRLFDLFSGYNHVME-- 63
           A VAPEASSPAWPTPSPRDTPITIPSSSSSPVAAALWAQLRQIDRLFDLFSGYNHVM+  
Sbjct: 12  AYVAPEASSPAWPTPSPRDTPITIPSSSSSPVAAALWAQLRQIDRLFDLFSGYNHVMDPR 71

Query: 64  -----------------------KMKAKKQGYFHRDEWRRGLRKLKVDNMEKLKNALFYL 123
                                  KMKAKKQGYFHRDEWRRGLRKLKVDNMEKLKNALFYL
Sbjct: 72  GIEKLCTHLEMNHLDVKILMLAWKMKAKKQGYFHRDEWRRGLRKLKVDNMEKLKNALFYL 131

Query: 124 EIE--------------------------------------------------------T 164
           EIE                                                        T
Sbjct: 132 EIEARIPPHFEDFFAYSFKYNLIEERRTSLDVEFLCELLEIVMGPLFRPQVQLLVEFLKT 191

[Close]

BLAST of Cp4.1LG04g09060 vs. NCBI nr
Match: XP_022929846.1 (DCN1-like protein 5 [Cucurbita moschata])

HSP 1 Score: 283 bits (725), Expect = 2.77e-94
Identity = 155/242 (64.05%), Postives = 158/242 (65.29%), Query Frame = 0


Query: 4   AKVAPEASSPAWPTPSPRDTPITIPSSSSSPVAAALWAQLRQIDRLFDLFSGYNHVME-- 63
           A VAPEASSPAWPTPSPRD PITIPSSSSSPVAAALWAQLR+IDRLFDLFSGYNHVM+  
Sbjct: 12  AYVAPEASSPAWPTPSPRDIPITIPSSSSSPVAAALWAQLRRIDRLFDLFSGYNHVMDPH 71

Query: 64  -----------------------KMKAKKQGYFHRDEWRRGLRKLKVDNMEKLKNALFYL 123
                                  KMKAKKQGYFHRDEWRRGLRKLKVDNMEKLKNALFYL
Sbjct: 72  GIEKLCTHLEMNHLDVKILMLAWKMKAKKQGYFHRDEWRRGLRKLKVDNMEKLKNALFYL 131

Query: 124 EIE--------------------------------------------------------T 164
           EIE                                                        T
Sbjct: 132 EIEARIPPHFEDFFAYSFKYNLIEERQTSLDVEFLCKLLEIVMGPLFRPQVQLLIEFLKT 191

[Close]

BLAST of Cp4.1LG04g09060 vs. NCBI nr
Match: XP_023007579.1 (DCN1-like protein 5 [Cucurbita maxima])

HSP 1 Score: 277 bits (708), Expect = 1.07e-91
Identity = 152/242 (62.81%), Postives = 156/242 (64.46%), Query Frame = 0


Query: 4   AKVAPEASSPAWPTPSPRDTPITIPSSSSSPVAAALWAQLRQIDRLFDLFSGYNHVME-- 63
           A VAPEASSPAWPTPSPRD PITIPSSSSSPVAAALWAQLR+IDRLFDLFSGYNHVM+  
Sbjct: 12  AYVAPEASSPAWPTPSPRDIPITIPSSSSSPVAAALWAQLRRIDRLFDLFSGYNHVMDPH 71

Query: 64  -----------------------KMKAKKQGYFHRDEWRRGLRKLKVDNMEKLKNALFYL 123
                                  KMKAKKQG+FHRDEWRRGLRKLKVDNMEKLK+ALFYL
Sbjct: 72  GIEKLCTHLEMNHLDVKILLLAWKMKAKKQGFFHRDEWRRGLRKLKVDNMEKLKSALFYL 131

Query: 124 EIE--------------------------------------------------------T 164
           EIE                                                        T
Sbjct: 132 EIEARIPPHFEDFFAYSFKYNLIEERQTSLDVEFLCELLEIVMGPLFRPQVQLLIEFLKT 191

[Close]

BLAST of Cp4.1LG04g09060 vs. NCBI nr
Match: KJB35265.1 (hypothetical protein B456_006G107200 [Gossypium raimondii])

HSP 1 Score: 119 bits (298), Expect = 1.43e-30
Identity = 52/92 (56.52%), Postives = 70/92 (76.09%), Query Frame = 0


Query: 62  KMKAKKQGYFHRDEWRRGLRKLKVDNMEKLKNALFYLEIETQTMYRVLIMDQWMNIFYFC 121
           KMKA+KQGYF  +EWRRG++ L+ D + KL+ AL  LE E Q+ Y+V+ MDQWM  F FC
Sbjct: 84  KMKAEKQGYFTLEEWRRGMKALRADTVSKLRKALPELEKEIQSDYKVINMDQWMGFFRFC 143

Query: 122 NQIKFPGLDNYDPNDAWPVIIDSFVEWLKRKQ 153
           N+I FP   NY+P+ AWP+I+D+FVEW++ KQ
Sbjct: 144 NEISFPDFSNYNPDLAWPLILDNFVEWMQSKQ 175

[Close]

BLAST of Cp4.1LG04g09060 vs. ExPASy TrEMBL
Match: A0A6J1EPA2 (Defective in cullin neddylation protein OS=Cucurbita moschata OX=3662 GN=LOC111436329 PE=4 SV=1)

HSP 1 Score: 283 bits (725), Expect = 1.34e-94
Identity = 155/242 (64.05%), Postives = 158/242 (65.29%), Query Frame = 0


Query: 4   AKVAPEASSPAWPTPSPRDTPITIPSSSSSPVAAALWAQLRQIDRLFDLFSGYNHVME-- 63
           A VAPEASSPAWPTPSPRD PITIPSSSSSPVAAALWAQLR+IDRLFDLFSGYNHVM+  
Sbjct: 12  AYVAPEASSPAWPTPSPRDIPITIPSSSSSPVAAALWAQLRRIDRLFDLFSGYNHVMDPH 71

Query: 64  -----------------------KMKAKKQGYFHRDEWRRGLRKLKVDNMEKLKNALFYL 123
                                  KMKAKKQGYFHRDEWRRGLRKLKVDNMEKLKNALFYL
Sbjct: 72  GIEKLCTHLEMNHLDVKILMLAWKMKAKKQGYFHRDEWRRGLRKLKVDNMEKLKNALFYL 131

Query: 124 EIE--------------------------------------------------------T 164
           EIE                                                        T
Sbjct: 132 EIEARIPPHFEDFFAYSFKYNLIEERQTSLDVEFLCKLLEIVMGPLFRPQVQLLIEFLKT 191

[Close]

BLAST of Cp4.1LG04g09060 vs. ExPASy TrEMBL
Match: A0A6J1L5C0 (Defective in cullin neddylation protein OS=Cucurbita maxima OX=3661 GN=LOC111500149 PE=4 SV=1)

HSP 1 Score: 277 bits (708), Expect = 5.16e-92
Identity = 152/242 (62.81%), Postives = 156/242 (64.46%), Query Frame = 0


Query: 4   AKVAPEASSPAWPTPSPRDTPITIPSSSSSPVAAALWAQLRQIDRLFDLFSGYNHVME-- 63
           A VAPEASSPAWPTPSPRD PITIPSSSSSPVAAALWAQLR+IDRLFDLFSGYNHVM+  
Sbjct: 12  AYVAPEASSPAWPTPSPRDIPITIPSSSSSPVAAALWAQLRRIDRLFDLFSGYNHVMDPH 71

Query: 64  -----------------------KMKAKKQGYFHRDEWRRGLRKLKVDNMEKLKNALFYL 123
                                  KMKAKKQG+FHRDEWRRGLRKLKVDNMEKLK+ALFYL
Sbjct: 72  GIEKLCTHLEMNHLDVKILLLAWKMKAKKQGFFHRDEWRRGLRKLKVDNMEKLKSALFYL 131

Query: 124 EIE--------------------------------------------------------T 164
           EIE                                                        T
Sbjct: 132 EIEARIPPHFEDFFAYSFKYNLIEERQTSLDVEFLCELLEIVMGPLFRPQVQLLIEFLKT 191

[Close]

BLAST of Cp4.1LG04g09060 vs. ExPASy TrEMBL
Match: A0A0D2SV94 (Defective in cullin neddylation protein OS=Gossypium raimondii OX=29730 GN=B456_006G107200 PE=4 SV=1)

HSP 1 Score: 119 bits (298), Expect = 6.93e-31
Identity = 52/92 (56.52%), Postives = 70/92 (76.09%), Query Frame = 0


Query: 62  KMKAKKQGYFHRDEWRRGLRKLKVDNMEKLKNALFYLEIETQTMYRVLIMDQWMNIFYFC 121
           KMKA+KQGYF  +EWRRG++ L+ D + KL+ AL  LE E Q+ Y+V+ MDQWM  F FC
Sbjct: 84  KMKAEKQGYFTLEEWRRGMKALRADTVSKLRKALPELEKEIQSDYKVINMDQWMGFFRFC 143

Query: 122 NQIKFPGLDNYDPNDAWPVIIDSFVEWLKRKQ 153
           N+I FP   NY+P+ AWP+I+D+FVEW++ KQ
Sbjct: 144 NEISFPDFSNYNPDLAWPLILDNFVEWMQSKQ 175

[Close]

BLAST of Cp4.1LG04g09060 vs. ExPASy TrEMBL
Match: A0A5D2XVZ4 (Defective in cullin neddylation protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A09G099300v1 PE=4 SV=1)

HSP 1 Score: 119 bits (297), Expect = 9.80e-31
Identity = 52/92 (56.52%), Postives = 70/92 (76.09%), Query Frame = 0


Query: 62  KMKAKKQGYFHRDEWRRGLRKLKVDNMEKLKNALFYLEIETQTMYRVLIMDQWMNIFYFC 121
           KMKA+KQGYF  +EWRRG++ L+ D + KL+ AL  LE E Q+ Y+V+ MDQWM  F FC
Sbjct: 84  KMKAEKQGYFTLEEWRRGMKALRADTVSKLRKALPELEKEIQSDYKVINMDQWMGFFRFC 143

Query: 122 NQIKFPGLDNYDPNDAWPVIIDSFVEWLKRKQ 153
           N+I FP   NY+P+ AWP+I+D+FVEW++ KQ
Sbjct: 144 NEISFPDFSNYNPDLAWPLILDNFVEWMQLKQ 175

[Close]

BLAST of Cp4.1LG04g09060 vs. ExPASy TrEMBL
Match: A0A5D2CG10 (Defective in cullin neddylation protein OS=Gossypium darwinii OX=34276 GN=ES288_D05G055400v1 PE=4 SV=1)

HSP 1 Score: 112 bits (281), Expect = 1.37e-28
Identity = 49/91 (53.85%), Postives = 67/91 (73.63%), Query Frame = 0


Query: 62  KMKAKKQGYFHRDEWRRGLRKLKVDNMEKLKNALFYLEIETQTMYRVLIMDQWMNIFYFC 121
           K+KA+KQGYF +DEW+ GL+ L VD++ KLK AL  LE E Q  Y+V+  DQW+N   FC
Sbjct: 62  KLKAEKQGYFTQDEWQTGLKALGVDSLSKLKKALSDLEKEVQNDYKVINSDQWINFLRFC 121

Query: 122 NQIKFPGLDNYDPNDAWPVIIDSFVEWLKRK 152
            +I FP L+NYD   AWP+I+D++VEW++ K
Sbjct: 122 KEISFPDLENYDAIQAWPLILDNYVEWMREK 152

[Close]

BLAST of Cp4.1LG04g09060 vs. TAIR 10
Match: AT1G15860.1 (Domain of unknown function (DUF298) )

HSP 1 Score: 95.5 bits (236), Expect = 4.2e-20
Identity = 54/148 (36.49%), Postives = 74/148 (50.00%), Query Frame = 0


Query: 62  KMKAKKQGYFHRDEWRRGLRKLKVDNMEKLKNAL---------------FY--------- 121
           KMKA+KQGYF  +EWRRGL+ L+ D + KLK AL               FY         
Sbjct: 79  KMKAEKQGYFTHEEWRRGLKALRADTINKLKKALPELEKEVRRPSNFADFYAYAFCYCLT 138

Query: 122 ------LEIET--------------------------QTMYRVLIMDQWMNIFYFCNQIK 154
                 ++IET                          Q  Y+V+ MDQWM ++ FCN+I 
Sbjct: 139 EEKQKSIDIETICQLLEIVMGSTFRAQVDYFVEYLKIQNDYKVINMDQWMGLYRFCNEIS 198

[Close]

BLAST of Cp4.1LG04g09060 vs. TAIR 10
Match: AT1G15860.2 (Domain of unknown function (DUF298) )

HSP 1 Score: 95.5 bits (236), Expect = 4.2e-20
Identity = 54/148 (36.49%), Postives = 74/148 (50.00%), Query Frame = 0


Query: 62  KMKAKKQGYFHRDEWRRGLRKLKVDNMEKLKNAL---------------FY--------- 121
           KMKA+KQGYF  +EWRRGL+ L+ D + KLK AL               FY         
Sbjct: 79  KMKAEKQGYFTHEEWRRGLKALRADTINKLKKALPELEKEVRRPSNFADFYAYAFCYCLT 138

Query: 122 ------LEIET--------------------------QTMYRVLIMDQWMNIFYFCNQIK 154
                 ++IET                          Q  Y+V+ MDQWM ++ FCN+I 
Sbjct: 139 EEKQKSIDIETICQLLEIVMGSTFRAQVDYFVEYLKIQNDYKVINMDQWMGLYRFCNEIS 198

[Close]

BLAST of Cp4.1LG04g09060 vs. TAIR 10
Match: AT1G15860.3 (Domain of unknown function (DUF298) )

HSP 1 Score: 92.0 bits (227), Expect = 4.6e-19
Identity = 54/157 (34.39%), Postives = 74/157 (47.13%), Query Frame = 0


Query: 62  KMKAKKQGYFHRDEWRRGLRKLKVDNMEKLKNAL---------------FY--------- 121
           KMKA+KQGYF  +EWRRGL+ L+ D + KLK AL               FY         
Sbjct: 79  KMKAEKQGYFTHEEWRRGLKALRADTINKLKKALPELEKEVRRPSNFADFYAYAFCYCLT 138

Query: 122 ------LEIET-----------------------------------QTMYRVLIMDQWMN 154
                 ++IET                                   Q  Y+V+ MDQWM 
Sbjct: 139 EEKQKSIDIETICQLLEIVMGSTFRAQVDYFVEYLKVWITQKSHIIQNDYKVINMDQWMG 198

[Close]

BLAST of Cp4.1LG04g09060 vs. TAIR 10
Match: AT3G12760.1 (CONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation protein (InterPro:IPR014764), Protein of unknown function DUF298 (InterPro:IPR005176), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF298) (TAIR:AT1G15860.2); Has 857 Blast hits to 855 proteins in 202 species: Archae - 0; Bacteria - 0; Metazoa - 482; Fungi - 154; Plants - 139; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). )

HSP 1 Score: 41.2 bits (95), Expect = 9.4e-04
Identity = 18/46 (39.13%), Postives = 24/46 (52.17%), Query Frame = 0


Query: 107 RVLIMDQWMNIFYFCNQIKFPGLDNYDPNDAWPVIIDSFVEWLKRK 153
           + +  D W  +  F   +  P L NYD   AWP +ID FVE+L  K
Sbjct: 201 KAISKDTWAQLLEFSRMVD-PVLSNYDAEGAWPYLIDEFVEYLYDK 245

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g09060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q92564	3.8e-10	30.34	DCN1-like protein 4 OS=Homo sapiens OX=9606 GN=DCUN1D4 PE=1 SV=2	[more]
Q8CCA0	1.9e-09	29.66	DCN1-like protein 4 OS=Mus musculus OX=10090 GN=Dcun1d4 PE=2 SV=1	[more]
Q5RHX6	2.5e-09	27.59	DCN1-like protein 4 OS=Danio rerio OX=7955 GN=dcun1d4 PE=3 SV=2	[more]
Q5RDF9	9.4e-09	27.59	DCN1-like protein 5 OS=Pongo abelii OX=9601 GN=DCUN1D5 PE=2 SV=1	[more]
Q9BTE7	1.2e-08	27.40	DCN1-like protein 5 OS=Homo sapiens OX=9606 GN=DCUN1D5 PE=1 SV=1	[more]

BLAST of Cp4.1LG04g09060 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6587844.1	4.97e-113	97.52	DCN1-like protein 4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023530967.1	1.24e-97	65.70	DCN1-like protein 5 [Cucurbita pepo subsp. pepo]	[more]
XP_022929846.1	2.77e-94	64.05	DCN1-like protein 5 [Cucurbita moschata]	[more]
XP_023007579.1	1.07e-91	62.81	DCN1-like protein 5 [Cucurbita maxima]	[more]
KJB35265.1	1.43e-30	56.52	hypothetical protein B456_006G107200 [Gossypium raimondii]	[more]

BLAST of Cp4.1LG04g09060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EPA2	1.34e-94	64.05	Defective in cullin neddylation protein OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1L5C0	5.16e-92	62.81	Defective in cullin neddylation protein OS=Cucurbita maxima OX=3661 GN=LOC111500...	[more]
A0A0D2SV94	6.93e-31	56.52	Defective in cullin neddylation protein OS=Gossypium raimondii OX=29730 GN=B456_...	[more]
A0A5D2XVZ4	9.80e-31	56.52	Defective in cullin neddylation protein OS=Gossypium mustelinum OX=34275 GN=E1A9...	[more]
A0A5D2CG10	1.37e-28	53.85	Defective in cullin neddylation protein OS=Gossypium darwinii OX=34276 GN=ES288_...	[more]

BLAST of Cp4.1LG04g09060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15860.1	4.2e-20	36.49	Domain of unknown function (DUF298)	[more]
AT1G15860.2	4.2e-20	36.49	Domain of unknown function (DUF298)	[more]
AT1G15860.3	4.6e-19	34.39	Domain of unknown function (DUF298)	[more]
AT3G12760.1	9.4e-04	39.13	CONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation protein (InterPro:IP...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR042460	DCN1-like, PONY binding domain	GENE3D	1.10.238.200	Cullin, PONY binding domain	coord: 54..154 e-value: 3.6E-13 score: 51.7
IPR005176	Potentiating neddylation domain	PFAM	PF03556	Cullin_binding	coord: 89..148 e-value: 1.1E-9 score: 38.7
IPR005176	Potentiating neddylation domain	PROSITE	PS51229	DCUN1	coord: 1..150 score: 9.62246
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	PANTHER	PTHR12281:SF12	DEFECTIVE IN CULLIN NEDDYLATION PROTEIN	coord: 101..153 coord: 61..101
IPR014764	Defective-in-cullin neddylation protein	PANTHER	PTHR12281	RP42 RELATED	coord: 61..101
IPR014764	Defective-in-cullin neddylation protein	PANTHER	PTHR12281	RP42 RELATED	coord: 101..153

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g09060.1	Cp4.1LG04g09060.1	mRNA