Cp4.1LG04g08580 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGTCTTTCTTTTTCTTTTTTCTCTCTCTACCTCTCGTATCTTCGCCGATCGACGGAACCCAGTCCACCGTCTTCTGCTGCAATCTCACGCCGCCACGCCAACCTCCGTCGTCGTCCGCAGTGCCTTCAACTCTTCTACGCTCGCCGTTGAGGTCTTTTCTTTCTTTTCTTTCTTTTCTTTCTTGTTTCTCTCTTTTTTCTGATTCAATCGATTTCCAAATAGCCTACATTTGTAAAGACTTCGATTGTGAGTTTGTAATCCTCCAAAATTTGACCTGTTCATATCCTGGACTGATTTTTAATTTTTATTTTTGGTTCGAAACAATTTTTAAATCATACTGGAGGTAGATGATTTCTCGTTCCTCCCAAATCTAGGAGTCCAAACAGAAAATGAAAGATTGGCTTCCGGGAGAACTTCTGATATTCCGTAGGGCTTGAACAGTTCTGTGTTTTGTGGTATTAGTTTGAATTTAAAGTGAATTAGGTGTTGGCAGGGTAGGAAGAGTATTTTGTTTTATTAAAAGAGATTTGGTGGAGTTTTTATTTTTTGAAGTATAGAATTAATTGGAATCCTTATCAGTTCGAACTAGATTTCCATTCAAAATATTGGAAGTTTTAAAAGTCCTTGGGTGATCTTGTTATTTCCATGAATGCAATGGATCAATTCAATGCTTCCATGCCCATTCTATTGAATATTTGTATGGAAAGAAGATATCAAAGGATCTTTGAAGTCAAATCTTCAGCTTGGTCGGATCATTTTAAGGTCATGAAATGTAAAGCTTTTAGATGGTATTCGCTGTCTACGTTCTTTTTTGGTAATTCCTTATGACATCATGGATCATCAGAGCAAAGCCCGCATCGACCTTTTATCTAATAAAAGCATCCCTTCCAAAAGTCGGGGTTTGTTTCACGTATTAGCTCTAGAATTACTATGGTTATCCGAGTAGCAAATACCATATAATTGATTTTGTGATGTCCCACATTGGTTGGGAAGGAGAACAAAGCACCCTTTATAAGGGTGTGGAAACCTTCCTCTAGCAGACGCGTTTTAAAGCATTGAGGGAAAGCCCAAAGAGGATAATATCTGCTAGCGGTGGATCTGGGTCGTTACAAATGGTATCAGAGCCAGACACCAGACTATGTGCCAGTGAGGAGGTTGTTCTCCAAAGGGGGTAGACATGAGATGGCAAGACGGTGTGCTAGTAGGGACGCTGGGCCCCAAAGGGGGTGGATTTGGCGGGGGTCCCACATCGATTGGAGAAAGGAAAGAGTGCCAGCGAGGATGTTGGGCCCCAAAGGGGGTGGATTGTGATGTCCCACATTGGTTGGGGAGGAGAACAAAACACCCTTTATAAGGGTGTGGAAACCTTCACCTAGCAGACGCGTTTTAAAGCCTTGAGGGAAAGCCCGAAAGGGAAAGCCCAAAGGAAGATAATATCTGCTAGCGATGGACTTGGGTCGTTACAAATTTAATGAGCCATTTGCAGTTTCACAATTTGAATGAGTTCATACTTAAACATGCATGACTTAAACTTAAAAACTTAAGACCTTCCTCCCTAGAAAAATTGCATCTGATTTGAAACTGATGGGTTTGTTGCAAATCAGATGGGTTTGTTGTCCACAGCAAGAAGAATGGCATGGAGGCAGATTACACTGCAACCATACTCAGCTCCTTTATTTGCTAGATTCTTTTCTAAATCTACCCCATATGTCGGTAAGTGTTTCCTTCACTCTTATTTTCTTTAAAAACTAATTCTCATCTGACCCAGGAATTGAGCCTTATACCTTATTTGTTATCTCTTTATTGAATGAATTTGATACCCAAAGAGGCAGAGCATGATTGTGTAGTAAAGGAAGTGTTCATATCTTCGTATGTCATCCATCATTGGTTTGCTATTATTATTTCCTTGTGAGTGTGTGATCAATAAGATGTAGATGTGCTTGATTTGTTGTCATTTGCGTTGTAGTAAAGGTGGGAATACCAGAGTTTTTAAACGGTGTTGGACATGGGGTTGAGTCACATGTGCCTAAACTTGAATCAGAGATTGGCGATTTCCAGAAGCTGCTTGTTACTCGCACACTTGAGCTAAAAAAACTTGGAATTCCATGCAAACATGTAAGTATTTCCTCAACTCAACATTATTCTTATTATTTGAATGATATGGATTAGCAAGACATAGACATGTTGCACCGCCAAAACAGCTCAAATGATAGCCATAGGCTTTGTATGCAATTATCAAAATGCTTCCATTCTTGTGGTATGTGGCAGAGGAAGCTGATATTGAAGTACACACATAAGTACAGGCTTGGACTATGGAGGCCCCGAGCTGATTTGGTGAAGGCCTGATGGTTTTAACAATGGGTTCATGAGGTGAATTGAATGATTTGGCTGATCCCTGGACCTCAGTTTGAATTGAATTGAATTGAATGATTCTTCATGTTACTGCTTTTTTAATTCTTTCTATGCTAATATAATATGTGCTCTATTCCTTGTCCTTCCTTGCTAATATTTAATCAGCAACTCTTTGTTGGGGTTACATATGTATATGCATACGATTTGATGGTGATCAAGTTGCGATGGTGAACTTAATTTCAAGATATAAGGCTTTCCTATTATAACAGGTTGTTCAAAAGGATTTCCCGTTCTTCTATCAAATATTCTGCTTTTTTTCGGGTACTCGGGTTCAAATACTTATGGACTCGCTGTTTGCTTATTGACTTCATATAATTCAGAAAAGATAATGCATCTAGCAAACTCCCCTCTAACCCGAATGAGCACTCAAATATCTGTCCTA CGTCTTTCTTTTTCTTTTTTCTCTCTCTACCTCTCGTATCTTCGCCGATCGACGGAACCCAGTCCACCGTCTTCTGCTGCAATCTCACGCCGCCACGCCAACCTCCGTCGTCGTCCGCAGTGCCTTCAACTCTTCTACGCTCGCCGTTGAGATGGGTTTGTTGTCCACAGCAAGAAGAATGGCATGGAGGCAGATTACACTGCAACCATACTCAGCTCCTTTATTTGCTAGATTCTTTTCTAAATCTACCCCATATGTCGTAAAGGTGGGAATACCAGAGTTTTTAAACGGTGTTGGACATGGGGTTGAGTCACATGTGCCTAAACTTGAATCAGAGATTGGCGATTTCCAGAAGCTGCTTGTTACTCGCACACTTGAGCTAAAAAAACTTGGAATTCCATGCAAACATAGGAAGCTGATATTGAAGTACACACATAAGTACAGGCTTGGACTATGGAGGCCCCGAGCTGATTTGGTGAAGGCCTGATGGTTTTAACAATGGGTTCATGAGGTGAATTGAATGATTTGGCTGATCCCTGGACCTCAGTTTGAATTGAATTGAATTGAATGATTCTTCATGTTACTGCTTTTTTAATTCTTTCTATGCTAATATAATATGTGCTCTATTCCTTGTCCTTCCTTGCTAATATTTAATCAGCAACTCTTTGTTGGGGTTACATATGTATATGCATACGATTTGATGGTGATCAAGTTGCGATGGTGAACTTAATTTCAAGATATAAGGCTTTCCTATTATAACAGGTTGTTCAAAAGGATTTCCCGTTCTTCTATCAAATATTCTGCTTTTTTTCGGGTACTCGGGTTCAAATACTTATGGACTCGCTGTTTGCTTATTGACTTCATATAATTCAGAAAAGATAATGCATCTAGCAAACTCCCCTCTAACCCGAATGAGCACTCAAATATCTGTCCTA ATGGGTTTGTTGTCCACAGCAAGAAGAATGGCATGGAGGCAGATTACACTGCAACCATACTCAGCTCCTTTATTTGCTAGATTCTTTTCTAAATCTACCCCATATGTCGTAAAGGTGGGAATACCAGAGTTTTTAAACGGTGTTGGACATGGGGTTGAGTCACATGTGCCTAAACTTGAATCAGAGATTGGCGATTTCCAGAAGCTGCTTGTTACTCGCACACTTGAGCTAAAAAAACTTGGAATTCCATGCAAACATAGGAAGCTGATATTGAAGTACACACATAAGTACAGGCTTGGACTATGGAGGCCCCGAGCTGATTTGGTGAAGGCCTGA MGLLSTARRMAWRQITLQPYSAPLFARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLELKKLGIPCKHRKLILKYTHKYRLGLWRPRADLVKA Homology
BLAST of Cp4.1LG04g08580 vs. NCBI nr
Match: XP_023530144.1 (uncharacterized protein LOC111792790 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 227 bits (579), Expect = 4.74e-75 Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0
BLAST of Cp4.1LG04g08580 vs. NCBI nr
Match: KAG6588600.1 (hypothetical protein SDJN03_17165, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 213 bits (541), Expect = 7.42e-69 Identity = 103/106 (97.17%), Postives = 105/106 (99.06%), Query Frame = 0
BLAST of Cp4.1LG04g08580 vs. NCBI nr
Match: XP_022931564.1 (uncharacterized protein LOC111437735 [Cucurbita moschata] >KAG7022396.1 hypothetical protein SDJN02_16127 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 206 bits (523), Expect = 1.24e-66 Identity = 99/102 (97.06%), Postives = 101/102 (99.02%), Query Frame = 0
BLAST of Cp4.1LG04g08580 vs. NCBI nr
Match: XP_022989493.1 (uncharacterized protein LOC111486535 [Cucurbita maxima]) HSP 1 Score: 201 bits (511), Expect = 8.41e-65 Identity = 98/102 (96.08%), Postives = 99/102 (97.06%), Query Frame = 0
BLAST of Cp4.1LG04g08580 vs. NCBI nr
Match: XP_022154599.1 (uncharacterized protein LOC111021823 [Momordica charantia]) HSP 1 Score: 194 bits (494), Expect = 3.99e-62 Identity = 97/108 (89.81%), Postives = 99/108 (91.67%), Query Frame = 0
BLAST of Cp4.1LG04g08580 vs. ExPASy TrEMBL
Match: A0A6J1EUK8 (uncharacterized protein LOC111437735 OS=Cucurbita moschata OX=3662 GN=LOC111437735 PE=4 SV=1) HSP 1 Score: 206 bits (523), Expect = 6.01e-67 Identity = 99/102 (97.06%), Postives = 101/102 (99.02%), Query Frame = 0
BLAST of Cp4.1LG04g08580 vs. ExPASy TrEMBL
Match: A0A6J1JQF2 (uncharacterized protein LOC111486535 OS=Cucurbita maxima OX=3661 GN=LOC111486535 PE=4 SV=1) HSP 1 Score: 201 bits (511), Expect = 4.07e-65 Identity = 98/102 (96.08%), Postives = 99/102 (97.06%), Query Frame = 0
BLAST of Cp4.1LG04g08580 vs. ExPASy TrEMBL
Match: A0A6J1DML5 (uncharacterized protein LOC111021823 OS=Momordica charantia OX=3673 GN=LOC111021823 PE=4 SV=1) HSP 1 Score: 194 bits (494), Expect = 1.93e-62 Identity = 97/108 (89.81%), Postives = 99/108 (91.67%), Query Frame = 0
BLAST of Cp4.1LG04g08580 vs. ExPASy TrEMBL
Match: A0A6J1HA49 (uncharacterized protein LOC111461991 OS=Cucurbita moschata OX=3662 GN=LOC111461991 PE=4 SV=1) HSP 1 Score: 191 bits (484), Expect = 6.47e-61 Identity = 95/108 (87.96%), Postives = 98/108 (90.74%), Query Frame = 0
BLAST of Cp4.1LG04g08580 vs. ExPASy TrEMBL
Match: A0A6J1HZ75 (uncharacterized protein LOC111467943 OS=Cucurbita maxima OX=3661 GN=LOC111467943 PE=4 SV=1) HSP 1 Score: 189 bits (481), Expect = 1.86e-60 Identity = 94/107 (87.85%), Postives = 97/107 (90.65%), Query Frame = 0
BLAST of Cp4.1LG04g08580 vs. TAIR 10
Match: AT5G26800.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: IGR protein motif (InterPro:IPR019083); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 146.0 bits (367), Expect = 1.8e-35 Identity = 75/113 (66.37%), Postives = 90/113 (79.65%), Query Frame = 0
BLAST of Cp4.1LG04g08580 vs. TAIR 10
Match: AT3G05810.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IGR protein motif (InterPro:IPR019083); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26800.1); Has 62 Blast hits to 62 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 132.9 bits (333), Expect = 1.6e-31 Identity = 69/112 (61.61%), Postives = 78/112 (69.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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