Cp4.1LG04g08240 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG04g08240
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	N-acetyl-glutamate semialdehyde dehydrogenase
Location	Cp4.1LG04: 3251932 .. 3255524 (+)
RNA-Seq Expression	Cp4.1LG04g08240
Synteny	Cp4.1LG04g08240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATGGGGAACCGGCAGCGGATTTCGGTCCCGCCATCTTAAACCCTTTTATCCGATTCAGGTTTTCGTTTCGCTTCGAGTTCGAGCTTGTTCCTCTCACAAATTTTCAGGTTTCTTTTGGGTTATGGTGTATCCGTGAACAAACCCTTCTTCCAAAACTGTGTTTCGTCCCTTAACAGCTTCAATTGACGCCCATCCATGGCGACCCACCTTCAAATTTCCGCTAAAATGGCCCTTCACGCCCCTGTTCTTCTAGCGCCCAGAGTAAGTTCGATCACCCTTTCTTCTATTTCTCTTTTTGAAGTATAAGGCTGAGTTAATGGGTGGGATTTTGGGCGCTCGGTTTCTAGCTTTTGAGAATGCATTTGTTTTGTTTCTCAATGTGGATGAAATTTGTTGGTAATTGGAAAATCATGTTGGTTAAATTGGTGGAACTACCATCCTGTGAATTTGTGGGTGATGTTGATTAATTGGAACATGCTATTTGATGGTAAATTCTGTTGCTGTGATGGCTGAATGCCTCTACATTAATGGGTATGGGTATAAACTTATCTGTTTTAGCCTCTCATAGCATTGAAAGAAGCGAGGAGCTATTTAAGAGGGAAGAGTATGCAAGACTGTAGTTATCTCGGGGTGTATATTGTTGTAACATAAGCGGAAACAAGATCAATTGCACTTTCACACACACGAACATAAATGAACAAAGAGACACAATGATTTACGTGGTTCGGAGAGAAGAAATTCTCCTACATCCACGGATGGTAGGCAATTACTATAATCAAAGTGTTTACAAATGTATCTTTCACACTCTCACACTACGAAGTCTCACTTACAAAGTTCTTCTTGATTGCCTCTAGGCAAATACAAAATGGCAATGACTCCACATCTCATAACAATGCTAGAAAAACCTTTATATACGCATAGCAATACTAATTCTCATGCATGAATCGAAGCAACACTAATGGTCATACATGAATCAAGATGATTCATGTACCAATATCGAAGATGAACCAAATGAATCCAATAGATTCATGAATAGAAGTGAGAAATGTACCAAAATTATTCATGAACCAAATCTTTATGACAATTCTCTACATATTCATGTTCAAATTTAGAAAATGATTAAATTTATGCCAGCTTGTTGGCTTAAAATTTTGGGTGTTTTATTGAATGTAATCATAAAGTAGGGCTATGAGTTCAAACTACTACCATGGTAGTTCCTCTTTATTCCATACTAATAGTCTATGCTGTTAATATATGTTCAATCAAAATGTCAGAGGTTTGAATCCTCTCACCCACGCATGATGAACTTTAAACAAAAAAAGGACTATGCATTGAACTTCATGACTTGAATAATATCCAAGTTGAGGCTTGAATGCGTGAGTTAGATGATTGAGAATATGTGTAATGATTAAATTTACTGTAGCTTTTCAACTAAGTTTTGTGGATGCGGCGGTGCTTTAGTCAATGAAGAATGGAAATGATATCCATCACATTTGTGTGATGGATTTTCATTTTTGTTTTAATGAATTTTCTATTCATTGTTGAACGAACTTGATGCCAATTGCTTACACTGTTTCCTTTTCTTTTTTATAATTCCTATTCTTTCGACTTAGTCGTTCTATCCAAATTTATAATGTACGATTTTTGTTCTTATTGTAGCTTCGATCACCGGAATGCAGCCACGTAGTGAGTTTAAAACCACATAAAAGAATTCAGAATGCTAGATCTATGGTCTCTTGTGCAATGAATATGAGTGCAGGACAATCAGATGATCCAGGGAGGGCGAGTTGGGATAGTTTGAAAGTCAGGGTAAAAAAACTTTGGGACAACTCACCAGAGCCAGTGAAGTGCTTCCCTTGGAATGAAGCATTGAATAACTTCATCCAGCTTATTGCTGATCTCATCTTGTCGGTTATCAAATACTTGAGCGTACCATTGCTTGTCGTCACATCTCTCAGCGAGATGTCCTACTGCGCCCATGAAAAGAAGCTTCTTATCGTCCCATTTCCATTAATAATTGGCTTCTCTGTTGCTGAGGTCATGAGACAGACAGCTTTGAGTCTATCTCCAATTCTTAAGGTAAGGTTTCAGCATCATCGTTCCATTACGTGTGAGACGTTAGTTGAATGAATCATAATGATAGTTTATTGACAAAGCATTGGTCTCATATCCTCCATTTTAGCTCTGCTTTTATATCGCCCTTGAAGTATGTTGCTTTAATCATGCTGTTGAATGTTAATCTTACGTTAGTTGAAAAAAACATCAATTGTCTGATTTAGCACTTTGTCGTTTCTTTTTACGTGTTCGCTTGTCACTTTTCTTATTGTTCTTTTAACACTCGTTTCAAACGATAATTTTTGAAATAATGTTAGCTGGGAATGTTTGAACACAGTTCAGTAGTCTTCCTGTTGCTCATTTTTATTTTGAAACACACTCCTGAGCTTATCCTTAAGTAGAAATACAATACAAAGAGCTGTTTAAAGAACTCCTTGATGTTCTTAGCTGTCTTTTAGAACTCCTTGATGTTCTTAGTTGTCTTTGTAGTATTCTTCATTTTGAACGATCATTTTCGAAATTCGGTTAGCTGGGAATGTTTGAACACAGATTAGTCGTCTTCCTGTTGCTCATTTTTATTTGAAACACACTCCTGAGCTTGTCCTAGAGTAGAAATACAATATAAAGAGCTGTTTAAAGAACTCGATGTTCTTAGTCGTATTTGTTGTATTCTTCATTTTGAACGATCATTTTCGAAATTCGGTTAGCTGGGAATGTTTGAACACAGTTTAGTAGTCTTCCTGTTGCTCATTTTTCATTTGAAACACACTCTAGATCTTGTTCTTCAGTAGAAATACAATATAAAGAGCTGTATAAAGATCTTGATTGAATTCTAGTTTCCTGTGAATTCTACTGAACATTTCTTGTGAATTTCCTTTTGCCTTTTTATGATTCAGGATCTTGAAGTACCATGGCATTTAATCACAATTGCTTTGTTCTTCACACTCATTAAACTGCCTGGCCCATACTACCCATATTGGGGACGCATATTCCTTCCCCATTTTGCAAATGGGGGTCTGTTGAGAACAGTATGGTCTATGTTTCTCTGGTTTAGAAGACCTCGAAAGACATCGATGTTGCTGAAGCAGAAAGAGAATCACCTAGATACACCGAAGAACTAATCGAGCAGTCTCCAAGAACATTGGAGTAGCAGCACAGAAAGTTTCAGATGAATTATCCATCCAGAACGAAGTGATTGAACGAGGCGAGGGAGCGAACTGATGAATAAATTGTTGTAGTACGAGACGGATTATGGTTGATTGAAGGATTGTTTTGGTGATGGGACATTGGAGATAAAGCCTTAAAATGAAAGGCTAAATGTGTTTTCATGTAGTAGCACAGAAAGTTTTGGAGGCTGTATTGGAGTAACTCAAATCCTAGAACATGAACATAGTACACAATGTTCTTCAAATTCCTTCCTAAATTTTAAGAAAATTTGTAAGATGGGGCTAAGCTATACTTATGTCTGTTCTAAGAATGTTGTCACAAATACGGCGGAAAATTTGCATGTGAATATCTTAATCACTAAACTACGTTC

mRNA sequence

CATGGGGAACCGGCAGCGGATTTCGGTCCCGCCATCTTAAACCCTTTTATCCGATTCAGGTTTTCGTTTCGCTTCGAGTTCGAGCTTGTTCCTCTCACAAATTTTCAGGTTTCTTTTGGGTTATGGTGTATCCGTGAACAAACCCTTCTTCCAAAACTGTGTTTCGTCCCTTAACAGCTTCAATTGACGCCCATCCATGGCGACCCACCTTCAAATTTCCGCTAAAATGGCCCTTCACGCCCCTGTTCTTCTAGCGCCCAGACTTCGATCACCGGAATGCAGCCACGTAGTGAGTTTAAAACCACATAAAAGAATTCAGAATGCTAGATCTATGGTCTCTTGTGCAATGAATATGAGTGCAGGACAATCAGATGATCCAGGGAGGGCGAGTTGGGATAGTTTGAAAGTCAGGGTAAAAAAACTTTGGGACAACTCACCAGAGCCAGTGAAGTGCTTCCCTTGGAATGAAGCATTGAATAACTTCATCCAGCTTATTGCTGATCTCATCTTGTCGGTTATCAAATACTTGAGCGTACCATTGCTTGTCGTCACATCTCTCAGCGAGATGTCCTACTGCGCCCATGAAAAGAAGCTTCTTATCGTCCCATTTCCATTAATAATTGGCTTCTCTGTTGCTGAGGTCATGAGACAGACAGCTTTGAGTCTATCTCCAATTCTTAAGGATCTTGAAGTACCATGGCATTTAATCACAATTGCTTTGTTCTTCACACTCATTAAACTGCCTGGCCCATACTACCCATATTGGGGACGCATATTCCTTCCCCATTTTGCAAATGGGGGTCTGTTGAGAACAGTATGGTCTATGTTTCTCTGGTTTAGAAGACCTCGAAAGACATCGATGTTGCTGAAGCAGAAAGAGAATCACCTAGATACACCGAAGAACTAATCGAGCAGTCTCCAAGAACATTGGAGTAGCAGCACAGAAAGTTTCAGATGAATTATCCATCCAGAACGAAGTGATTGAACGAGGCGAGGGAGCGAACTGATGAATAAATTGTTGTAGTACGAGACGGATTATGGTTGATTGAAGGATTGTTTTGGTGATGGGACATTGGAGATAAAGCCTTAAAATGAAAGGCTAAATGTGTTTTCATGTAGTAGCACAGAAAGTTTTGGAGGCTGTATTGGAGTAACTCAAATCCTAGAACATGAACATAGTACACAATGTTCTTCAAATTCCTTCCTAAATTTTAAGAAAATTTGTAAGATGGGGCTAAGCTATACTTATGTCTGTTCTAAGAATGTTGTCACAAATACGGCGGAAAATTTGCATGTGAATATCTTAATCACTAAACTACGTTC

Coding sequence (CDS)

ATGGCGACCCACCTTCAAATTTCCGCTAAAATGGCCCTTCACGCCCCTGTTCTTCTAGCGCCCAGACTTCGATCACCGGAATGCAGCCACGTAGTGAGTTTAAAACCACATAAAAGAATTCAGAATGCTAGATCTATGGTCTCTTGTGCAATGAATATGAGTGCAGGACAATCAGATGATCCAGGGAGGGCGAGTTGGGATAGTTTGAAAGTCAGGGTAAAAAAACTTTGGGACAACTCACCAGAGCCAGTGAAGTGCTTCCCTTGGAATGAAGCATTGAATAACTTCATCCAGCTTATTGCTGATCTCATCTTGTCGGTTATCAAATACTTGAGCGTACCATTGCTTGTCGTCACATCTCTCAGCGAGATGTCCTACTGCGCCCATGAAAAGAAGCTTCTTATCGTCCCATTTCCATTAATAATTGGCTTCTCTGTTGCTGAGGTCATGAGACAGACAGCTTTGAGTCTATCTCCAATTCTTAAGGATCTTGAAGTACCATGGCATTTAATCACAATTGCTTTGTTCTTCACACTCATTAAACTGCCTGGCCCATACTACCCATATTGGGGACGCATATTCCTTCCCCATTTTGCAAATGGGGGTCTGTTGAGAACAGTATGGTCTATGTTTCTCTGGTTTAGAAGACCTCGAAAGACATCGATGTTGCTGAAGCAGAAAGAGAATCACCTAGATACACCGAAGAACTAA

Protein sequence

MATHLQISAKMALHAPVLLAPRLRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDDPGRASWDSLKVRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSVPLLVVTSLSEMSYCAHEKKLLIVPFPLIIGFSVAEVMRQTALSLSPILKDLEVPWHLITIALFFTLIKLPGPYYPYWGRIFLPHFANGGLLRTVWSMFLWFRRPRKTSMLLKQKENHLDTPKN

Homology

[Close]

BLAST of Cp4.1LG04g08240 vs. NCBI nr
Match: XP_023530129.1 (uncharacterized protein LOC111792778 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 476 bits (1225), Expect = 1.88e-169
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0


Query: 1   MATHLQISAKMALHAPVLLAPRLRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDD 60
           MATHLQISAKMALHAPVLLAPRLRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDD
Sbjct: 1   MATHLQISAKMALHAPVLLAPRLRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDD 60

Query: 61  PGRASWDSLKVRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSVPLLVVTS 120
           PGRASWDSLKVRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSVPLLVVTS
Sbjct: 61  PGRASWDSLKVRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSVPLLVVTS 120

Query: 121 LSEMSYCAHEKKLLIVPFPLIIGFSVAEVMRQTALSLSPILKDLEVPWHLITIALFFTLI 180
           LSEMSYCAHEKKLLIVPFPLIIGFSVAEVMRQTALSLSPILKDLEVPWHLITIALFFTLI
Sbjct: 121 LSEMSYCAHEKKLLIVPFPLIIGFSVAEVMRQTALSLSPILKDLEVPWHLITIALFFTLI 180

Query: 181 KLPGPYYPYWGRIFLPHFANGGLLRTVWSMFLWFRRPRKTSMLLKQKENHLDTPKN 236
           KLPGPYYPYWGRIFLPHFANGGLLRTVWSMFLWFRRPRKTSMLLKQKENHLDTPKN
Sbjct: 181 KLPGPYYPYWGRIFLPHFANGGLLRTVWSMFLWFRRPRKTSMLLKQKENHLDTPKN 236

[Close]

BLAST of Cp4.1LG04g08240 vs. NCBI nr
Match: XP_022988926.1 (uncharacterized protein LOC111486136 [Cucurbita maxima] >XP_022988927.1 uncharacterized protein LOC111486136 [Cucurbita maxima])

HSP 1 Score: 471 bits (1211), Expect = 2.57e-167
Identity = 233/236 (98.73%), Postives = 234/236 (99.15%), Query Frame = 0


Query: 1   MATHLQISAKMALHAPVLLAPRLRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDD 60
           MATHLQISAKMALHAPVLLAPRLRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDD
Sbjct: 1   MATHLQISAKMALHAPVLLAPRLRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDD 60

Query: 61  PGRASWDSLKVRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSVPLLVVTS 120
           PGRASWDSLK RVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSVPLLVVTS
Sbjct: 61  PGRASWDSLKNRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSVPLLVVTS 120

Query: 121 LSEMSYCAHEKKLLIVPFPLIIGFSVAEVMRQTALSLSPILKDLEVPWHLITIALFFTLI 180
           LSEMSYCAHEKKLLIVPFPLIIGFSVAEVMRQTALSLSPILKDLEVPWHLITIALFFTLI
Sbjct: 121 LSEMSYCAHEKKLLIVPFPLIIGFSVAEVMRQTALSLSPILKDLEVPWHLITIALFFTLI 180

Query: 181 KLPGPYYPYWGRIFLPHFANGGLLRTVWSMFLWFRRPRKTSMLLKQKENHLDTPKN 236
           KLPGPYYPYWGRIFLPHFANGGLLRTVWSMF WFRRPR+TSMLLKQKENHLDTPKN
Sbjct: 181 KLPGPYYPYWGRIFLPHFANGGLLRTVWSMFFWFRRPRRTSMLLKQKENHLDTPKN 236

[Close]

BLAST of Cp4.1LG04g08240 vs. NCBI nr
Match: KAG7022436.1 (hypothetical protein SDJN02_16167 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 469 bits (1206), Expect = 1.49e-166
Identity = 231/236 (97.88%), Postives = 234/236 (99.15%), Query Frame = 0


Query: 1   MATHLQISAKMALHAPVLLAPRLRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDD 60
           MATHLQISAKMALHAPVLLAPR++SPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDD
Sbjct: 1   MATHLQISAKMALHAPVLLAPRVQSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDD 60

Query: 61  PGRASWDSLKVRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSVPLLVVTS 120
           PGRASWDSLK RVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLS+PLL VTS
Sbjct: 61  PGRASWDSLKDRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSIPLLAVTS 120

Query: 121 LSEMSYCAHEKKLLIVPFPLIIGFSVAEVMRQTALSLSPILKDLEVPWHLITIALFFTLI 180
           LSEMSYCAHEKKLLIVPFPLIIGFSVAEVMRQTALSLSPILKDLEVPWHLITIALFFTLI
Sbjct: 121 LSEMSYCAHEKKLLIVPFPLIIGFSVAEVMRQTALSLSPILKDLEVPWHLITIALFFTLI 180

Query: 181 KLPGPYYPYWGRIFLPHFANGGLLRTVWSMFLWFRRPRKTSMLLKQKENHLDTPKN 236
           KLPGPYYPYWGRIFLPHFANGGLLRTVWSMFLWFRRPRKTSMLLKQKENHLDTPKN
Sbjct: 181 KLPGPYYPYWGRIFLPHFANGGLLRTVWSMFLWFRRPRKTSMLLKQKENHLDTPKN 236

[Close]

BLAST of Cp4.1LG04g08240 vs. NCBI nr
Match: XP_022927689.1 (uncharacterized protein LOC111434507 [Cucurbita moschata])

HSP 1 Score: 468 bits (1205), Expect = 2.11e-166
Identity = 230/236 (97.46%), Postives = 234/236 (99.15%), Query Frame = 0


Query: 1   MATHLQISAKMALHAPVLLAPRLRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDD 60
           MATHLQISAKMALHAPVLLAPRLRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDD
Sbjct: 1   MATHLQISAKMALHAPVLLAPRLRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDD 60

Query: 61  PGRASWDSLKVRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSVPLLVVTS 120
           PGRASWDSLK RVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLS+PLL VTS
Sbjct: 61  PGRASWDSLKDRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSIPLLAVTS 120

Query: 121 LSEMSYCAHEKKLLIVPFPLIIGFSVAEVMRQTALSLSPILKDLEVPWHLITIALFFTLI 180
           LSEMSYCAHEKKLLIVPFP+IIGFSVAEVMRQTALSLSPILKDLEVPWHLITIALFFTL+
Sbjct: 121 LSEMSYCAHEKKLLIVPFPVIIGFSVAEVMRQTALSLSPILKDLEVPWHLITIALFFTLV 180

Query: 181 KLPGPYYPYWGRIFLPHFANGGLLRTVWSMFLWFRRPRKTSMLLKQKENHLDTPKN 236
           KLPGPYYPYWGRIFLPHFANGGLLRTVWSMFLWFRRPRKTS+LLKQKENHLDTPKN
Sbjct: 181 KLPGPYYPYWGRIFLPHFANGGLLRTVWSMFLWFRRPRKTSILLKQKENHLDTPKN 236

[Close]

BLAST of Cp4.1LG04g08240 vs. NCBI nr
Match: XP_038889064.1 (uncharacterized protein LOC120078811 [Benincasa hispida])

HSP 1 Score: 420 bits (1079), Expect = 4.38e-147
Identity = 201/234 (85.90%), Postives = 216/234 (92.31%), Query Frame = 0


Query: 3   THLQISAKMALHAPVLLAPRLRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDDPG 62
           THLQ S KMALH P+LLAP  R PECSH++SL+PHKR QNARS+VSCAMNM+AGQSDD G
Sbjct: 10  THLQTSIKMALHVPLLLAPSRRKPECSHIMSLEPHKRFQNARSVVSCAMNMTAGQSDDSG 69

Query: 63  RASWDSLKVRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSVPLLVVTSLS 122
           R SWDSLK RVK+LWDNSPEPVKCFPWNEAL+NFIQLIADLIL+VIKYL VPLLVVTSLS
Sbjct: 70  RVSWDSLKNRVKQLWDNSPEPVKCFPWNEALDNFIQLIADLILTVIKYLCVPLLVVTSLS 129

Query: 123 EMSYCAHEKKLLIVPFPLIIGFSVAEVMRQTALSLSPILKDLEVPWHLITIALFFTLIKL 182
           EMSYCAHEKKLLIVPFP IIGFS+AEVMRQTALSLSPILKDLEVPWHLITIA+FFTLIKL
Sbjct: 130 EMSYCAHEKKLLIVPFPFIIGFSIAEVMRQTALSLSPILKDLEVPWHLITIAIFFTLIKL 189

Query: 183 PGPYYPYWGRIFLPHFANGGLLRTVWSMFLWFRRPRKTSMLLKQKENHLDTPKN 236
           PGPYYPYWGRIF+PHF NGGL RT WS+FLWFRRPRKTSMLLK  +NHLDT +N
Sbjct: 190 PGPYYPYWGRIFIPHFTNGGLFRTFWSLFLWFRRPRKTSMLLKHNKNHLDTKRN 243

[Close]

BLAST of Cp4.1LG04g08240 vs. ExPASy TrEMBL
Match: A0A6J1JED8 (uncharacterized protein LOC111486136 OS=Cucurbita maxima OX=3661 GN=LOC111486136 PE=4 SV=1)

HSP 1 Score: 471 bits (1211), Expect = 1.24e-167
Identity = 233/236 (98.73%), Postives = 234/236 (99.15%), Query Frame = 0


Query: 1   MATHLQISAKMALHAPVLLAPRLRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDD 60
           MATHLQISAKMALHAPVLLAPRLRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDD
Sbjct: 1   MATHLQISAKMALHAPVLLAPRLRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDD 60

Query: 61  PGRASWDSLKVRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSVPLLVVTS 120
           PGRASWDSLK RVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSVPLLVVTS
Sbjct: 61  PGRASWDSLKNRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSVPLLVVTS 120

Query: 121 LSEMSYCAHEKKLLIVPFPLIIGFSVAEVMRQTALSLSPILKDLEVPWHLITIALFFTLI 180
           LSEMSYCAHEKKLLIVPFPLIIGFSVAEVMRQTALSLSPILKDLEVPWHLITIALFFTLI
Sbjct: 121 LSEMSYCAHEKKLLIVPFPLIIGFSVAEVMRQTALSLSPILKDLEVPWHLITIALFFTLI 180

Query: 181 KLPGPYYPYWGRIFLPHFANGGLLRTVWSMFLWFRRPRKTSMLLKQKENHLDTPKN 236
           KLPGPYYPYWGRIFLPHFANGGLLRTVWSMF WFRRPR+TSMLLKQKENHLDTPKN
Sbjct: 181 KLPGPYYPYWGRIFLPHFANGGLLRTVWSMFFWFRRPRRTSMLLKQKENHLDTPKN 236

[Close]

BLAST of Cp4.1LG04g08240 vs. ExPASy TrEMBL
Match: A0A6J1EIP9 (uncharacterized protein LOC111434507 OS=Cucurbita moschata OX=3662 GN=LOC111434507 PE=4 SV=1)

HSP 1 Score: 468 bits (1205), Expect = 1.02e-166
Identity = 230/236 (97.46%), Postives = 234/236 (99.15%), Query Frame = 0


Query: 1   MATHLQISAKMALHAPVLLAPRLRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDD 60
           MATHLQISAKMALHAPVLLAPRLRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDD
Sbjct: 1   MATHLQISAKMALHAPVLLAPRLRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDD 60

Query: 61  PGRASWDSLKVRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSVPLLVVTS 120
           PGRASWDSLK RVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLS+PLL VTS
Sbjct: 61  PGRASWDSLKDRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSIPLLAVTS 120

Query: 121 LSEMSYCAHEKKLLIVPFPLIIGFSVAEVMRQTALSLSPILKDLEVPWHLITIALFFTLI 180
           LSEMSYCAHEKKLLIVPFP+IIGFSVAEVMRQTALSLSPILKDLEVPWHLITIALFFTL+
Sbjct: 121 LSEMSYCAHEKKLLIVPFPVIIGFSVAEVMRQTALSLSPILKDLEVPWHLITIALFFTLV 180

Query: 181 KLPGPYYPYWGRIFLPHFANGGLLRTVWSMFLWFRRPRKTSMLLKQKENHLDTPKN 236
           KLPGPYYPYWGRIFLPHFANGGLLRTVWSMFLWFRRPRKTS+LLKQKENHLDTPKN
Sbjct: 181 KLPGPYYPYWGRIFLPHFANGGLLRTVWSMFLWFRRPRKTSILLKQKENHLDTPKN 236

[Close]

BLAST of Cp4.1LG04g08240 vs. ExPASy TrEMBL
Match: A0A6J1C7B2 (uncharacterized protein LOC111008035 OS=Momordica charantia OX=3673 GN=LOC111008035 PE=4 SV=1)

HSP 1 Score: 416 bits (1069), Expect = 5.71e-146
Identity = 203/237 (85.65%), Postives = 217/237 (91.56%), Query Frame = 0


Query: 1   MATHLQISAKMALHAPVLLAPRL-RSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSD 60
           MATHLQIS KMALH+PVL APR  RSPEC+HVVS KPHKR QNARSMVSCAMNM+AGQSD
Sbjct: 1   MATHLQISTKMALHSPVLPAPRHHRSPECNHVVSFKPHKRFQNARSMVSCAMNMTAGQSD 60

Query: 61  DPGRASWDSLKVRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSVPLLVVT 120
           DPG+ SWDSLK RVKKLWD+SPEPVKCFPWNEAL+NFIQLIADL+L+VIKYL VPLL VT
Sbjct: 61  DPGKVSWDSLKDRVKKLWDSSPEPVKCFPWNEALDNFIQLIADLVLAVIKYLCVPLLAVT 120

Query: 121 SLSEMSYCAHEKKLLIVPFPLIIGFSVAEVMRQTALSLSPILKDLEVPWHLITIALFFTL 180
           SLSEMSYCAHEKKL +VPFPLI+GFSVAEVMRQTALSLSPILKDLEVPWHLITIA+FFTL
Sbjct: 121 SLSEMSYCAHEKKLFVVPFPLIVGFSVAEVMRQTALSLSPILKDLEVPWHLITIAIFFTL 180

Query: 181 IKLPGPYYPYWGRIFLPHFANGGLLRTVWSMFLWFRRPRKTSMLLKQKENHLDTPKN 236
           IKLPGPYYPYWGRIF+PHFANGGLLRT+WS FLWFRRPRK S  LK    HL+T KN
Sbjct: 181 IKLPGPYYPYWGRIFIPHFANGGLLRTLWSSFLWFRRPRKPSTQLKHNSTHLNTNKN 237

[Close]

BLAST of Cp4.1LG04g08240 vs. ExPASy TrEMBL
Match: A0A1S3C0E1 (uncharacterized protein LOC103495211 OS=Cucumis melo OX=3656 GN=LOC103495211 PE=4 SV=1)

HSP 1 Score: 416 bits (1068), Expect = 1.01e-145
Identity = 201/234 (85.90%), Postives = 216/234 (92.31%), Query Frame = 0


Query: 3   THLQISAKMALHAPVLLAPRLRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDDPG 62
           TH Q S KMALHAP LLAP  RSPECSH+VSLKPHKR QNARS+VSCAMNM+AGQSDD G
Sbjct: 10  THFQTSIKMALHAPFLLAPSCRSPECSHIVSLKPHKRFQNARSVVSCAMNMTAGQSDDSG 69

Query: 63  RASWDSLKVRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSVPLLVVTSLS 122
           R +WDSLK +VK+LWD SPEPVK FPWNEAL+NFIQLIADLIL+VIKYLSVPLL+VTSLS
Sbjct: 70  RVNWDSLKNKVKQLWDTSPEPVKSFPWNEALDNFIQLIADLILTVIKYLSVPLLLVTSLS 129

Query: 123 EMSYCAHEKKLLIVPFPLIIGFSVAEVMRQTALSLSPILKDLEVPWHLITIALFFTLIKL 182
           EMSYCAHEKKLLIVPFP IIGFSVAEVMRQTALSLSPILKDLEVPWHLITIA+FFTLIKL
Sbjct: 130 EMSYCAHEKKLLIVPFPFIIGFSVAEVMRQTALSLSPILKDLEVPWHLITIAIFFTLIKL 189

Query: 183 PGPYYPYWGRIFLPHFANGGLLRTVWSMFLWFRRPRKTSMLLKQKENHLDTPKN 236
           PGPY+PYWGRIF+PH ANGGL+RT+WS FLWFRRP+KTSMLLK  ENHLDT KN
Sbjct: 190 PGPYFPYWGRIFIPHLANGGLVRTLWSFFLWFRRPQKTSMLLKHNENHLDTKKN 243

[Close]

BLAST of Cp4.1LG04g08240 vs. ExPASy TrEMBL
Match: A0A0A0K6P0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G074900 PE=4 SV=1)

HSP 1 Score: 401 bits (1031), Expect = 4.36e-140
Identity = 197/234 (84.19%), Postives = 211/234 (90.17%), Query Frame = 0


Query: 3   THLQISAKMALHAPVLLAPRLRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDDPG 62
           TH Q S K+ALHAP LLAP  RSPECSHVVSLKPHKR QNA S+VSCA NM+AGQSDD G
Sbjct: 10  THFQTSMKLALHAPFLLAPSRRSPECSHVVSLKPHKRFQNAGSVVSCATNMTAGQSDDSG 69

Query: 63  RASWDSLKVRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSVPLLVVTSLS 122
           R +WDSLK RVK+LW++SPEPVK FPWNEAL+NFIQLIADLIL+VIKYL VPLL+VTSLS
Sbjct: 70  RVNWDSLKNRVKQLWESSPEPVKSFPWNEALDNFIQLIADLILTVIKYLFVPLLLVTSLS 129

Query: 123 EMSYCAHEKKLLIVPFPLIIGFSVAEVMRQTALSLSPILKDLEVPWHLITIALFFTLIKL 182
           EMSYCAHEKKLLIVPF  IIGFS AEVMRQTALSLSPILKDLEVPWHLITIA+FFTLIKL
Sbjct: 130 EMSYCAHEKKLLIVPFLFIIGFSAAEVMRQTALSLSPILKDLEVPWHLITIAIFFTLIKL 189

Query: 183 PGPYYPYWGRIFLPHFANGGLLRTVWSMFLWFRRPRKTSMLLKQKENHLDTPKN 236
           PGP YPYWGRIF+PH ANGGL+RT WSMFLWFRRP+KTSMLLK  ENHLDT KN
Sbjct: 190 PGPSYPYWGRIFIPHLANGGLVRTTWSMFLWFRRPQKTSMLLKHNENHLDTKKN 243

[Close]

BLAST of Cp4.1LG04g08240 vs. TAIR 10
Match: AT1G49510.1 (embryo defective 1273 )

HSP 1 Score: 238.4 bits (607), Expect = 5.8e-63
Identity = 109/179 (60.89%), Postives = 144/179 (80.45%), Query Frame = 0


Query: 44  RSMVSCAMNMSAGQS-DDPGRASWDSLKVRVKKLWDNSPEPVKCFPWNEALNNFIQLIAD 103
           RS++  A++M +G S + P + ++D+L  R K +WDNSP+PVK FPWN A  NFIQL+ D
Sbjct: 50  RSLLCRAIHMESGHSGEQPKKLNFDNLLRRTKHVWDNSPQPVKEFPWNRAFGNFIQLVLD 109

Query: 104 LILSVIKYLSVPLLVVTSLSEMSYCAHEKKLLIVPFPLIIGFSVAEVMRQTALSLSPILK 163
           L +SV+K+L VP+L V+S+SEMSYCAHE+KL +VPFPL+IG  VA V+++TAL +SP LK
Sbjct: 110 LAISVVKFLFVPILAVSSISEMSYCAHERKLALVPFPLVIGMVVAGVLQETALKISPRLK 169

Query: 164 DLEVPWHLITIALFFTLIKLPGPYYPYWGRIFLPHFANGGLLRTVWSMFLWFRRPRKTS 222
           + EVPWHLI + +FFTLIKLPGPYYPYWGR+ +PHFANG LLR +WSMF W+++ R TS
Sbjct: 170 EAEVPWHLIAMMMFFTLIKLPGPYYPYWGRLLVPHFANGVLLRALWSMFFWYKKTRNTS 228

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g08240 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG04g08240 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023530129.1	1.88e-169	100.00	uncharacterized protein LOC111792778 [Cucurbita pepo subsp. pepo]	[more]
XP_022988926.1	2.57e-167	98.73	uncharacterized protein LOC111486136 [Cucurbita maxima] >XP_022988927.1 uncharac...	[more]
KAG7022436.1	1.49e-166	97.88	hypothetical protein SDJN02_16167 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022927689.1	2.11e-166	97.46	uncharacterized protein LOC111434507 [Cucurbita moschata]	[more]
XP_038889064.1	4.38e-147	85.90	uncharacterized protein LOC120078811 [Benincasa hispida]	[more]

BLAST of Cp4.1LG04g08240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JED8	1.24e-167	98.73	uncharacterized protein LOC111486136 OS=Cucurbita maxima OX=3661 GN=LOC111486136...	[more]
A0A6J1EIP9	1.02e-166	97.46	uncharacterized protein LOC111434507 OS=Cucurbita moschata OX=3662 GN=LOC1114345...	[more]
A0A6J1C7B2	5.71e-146	85.65	uncharacterized protein LOC111008035 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]
A0A1S3C0E1	1.01e-145	85.90	uncharacterized protein LOC103495211 OS=Cucumis melo OX=3656 GN=LOC103495211 PE=...	[more]
A0A0A0K6P0	4.36e-140	84.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G074900 PE=4 SV=1	[more]

BLAST of Cp4.1LG04g08240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G49510.1	5.8e-63	60.89	embryo defective 1273	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36000	DEFECTIVE 1273 PROTEIN, PUTATIVE-RELATED	coord: 14..223
None	No IPR available	PANTHER	PTHR36000:SF2	DEFECTIVE 1273 PROTEIN, PUTATIVE-RELATED	coord: 14..223

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g08240.1	Cp4.1LG04g08240.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071472	cellular response to salt stress
biological_process	GO:0009658	chloroplast organization
cellular_component	GO:0016021	integral component of membrane