Cp4.1LG04g08060 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG04g08060
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	transcription factor bHLH95-like
Location	Cp4.1LG04: 3536936 .. 3538351 (+)
RNA-Seq Expression	Cp4.1LG04g08060
Synteny	Cp4.1LG04g08060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GATGTCGACATCGACATCGACCTTGACGATGATAATGACAACGACAATAGCAACGACAAATCCCCTGCCAACACTGACCTCTTACCTCCCCTGCCTTTGTCGGGAAGGAAGAGGGAGGCGGTGGAGGGGAGACCGGGTGGAGGTGGAGAGTCGACCGAACATGAAATTCATATTTGGACGGAGAGGGAGAGGAGGAAGAGGATGAGGAATATGTTCTCTAATCTTCATGCTTTGATTCCTCACCTTCCTCCTAAGGTAACTTTTTTTTTTTCTTTTTTTTTTTTTTTTGTTCATCTCATCCATTGAACAAACCTCTTGTTTTTGTAAATTTTGGATTTTTATATATTTTTTAATTGTTTAATTGTGATATTATATGTCAAAATAAGCTTGGTTGAACCATAATTAACATATATTTTTAATTAAAAAGTCAATGGTTTAAGGAGTTTTGTTAATTAAAAAAATATTTTTTTTTTCTGGGTCCATAGGGAGTGATGTAACCTAACAAACTGCCATGTACACGAGTTGGGGTTGAACAAAGTTTTTGGACTGATTCAAAATTTTGGATTGGTTGGATTAGTGATCCAAGCACCGTACATAGAGTTCACAAACCAACCGCTCGGTTAAAATGAGTTGTCGGGTTGTTTTTTTTAATTATTTAAAAAAAATCTACTTACATACACGATGCATTAATAATTAAAATCTCAAAAAAAAAAAATTCGAAGTATCAAATATTCACAAGCTATAATGAATCATGAATGATGCAAATTTCAGATATTTTTAATGTTTATAATATCTGTAGAATAGGATAGGGTTGAGTTTTAACCTCTGATTGAATTTTTTTTTTTTTAATTTTAAATTTATGTTATGTATATGATATTTATTTAGTGAAATACTAATTCAATAAAGGAACAAATGAAATGGCAGGCGGACAAATCAACTATAGTGGACGAAGCAGTAAACTACATAAAAACCGTACAACAAACCCTTCAAACACTCTACAACCAAAAGCTCGAAAAGCTCCAAAACAACAATCCAGCTGTGAGTTACAAGGCTACTCATTATTATCCTGAGCAACAACAGCAACAACAACAATCCAACTCAACCACCACAACCCACCAAGCTTTCTTGGCCGATCAAGCTTCTTCCTCCAACGGCATGTCCTCCACTCTTCTTCCACCACCACCACTGCCGCCACTGCCGCCTCCCTTTTCTGATACTACTACAACGTTTCAGACTTGGACTTCCTCCAACCTCGTATTAAGTATTTGCGGCGGCGAAGCCCATTTCTGCATCTGCTCTGTTAAGAAGTCTGGCTTGTTCGCCGCCGTTTGTTATATTCTTGATAAGCATCAGATCGAGGTCGTTTCGGCTCATGTCTCTTCGGATTTCCATCGCACGTTCTTTATGATCCAAGGC

mRNA sequence

GATGTCGACATCGACATCGACCTTGACGATGATAATGACAACGACAATAGCAACGACAAATCCCCTGCCAACACTGACCTCTTACCTCCCCTGCCTTTGTCGGGAAGGAAGAGGGAGGCGGTGGAGGGGAGACCGGGTGGAGGTGGAGAGTCGACCGAACATGAAATTCATATTTGGACGGAGAGGGAGAGGAGGAAGAGGATGAGGAATATGTTCTCTAATCTTCATGCTTTGATTCCTCACCTTCCTCCTAAGGCGGACAAATCAACTATAGTGGACGAAGCAGTAAACTACATAAAAACCGTACAACAAACCCTTCAAACACTCTACAACCAAAAGCTCGAAAAGCTCCAAAACAACAATCCAGCTGTGAGTTACAAGGCTACTCATTATTATCCTGAGCAACAACAGCAACAACAACAATCCAACTCAACCACCACAACCCACCAAGCTTTCTTGGCCGATCAAGCTTCTTCCTCCAACGGCATGTCCTCCACTCTTCTTCCACCACCACCACTGCCGCCACTGCCGCCTCCCTTTTCTGATACTACTACAACGTTTCAGACTTGGACTTCCTCCAACCTCGTATTAAGTATTTGCGGCGGCGAAGCCCATTTCTGCATCTGCTCTGTTAAGAAGTCTGGCTTGTTCGCCGCCGTTTGTTATATTCTTGATAAGCATCAGATCGAGGTCGTTTCGGCTCATGTCTCTTCGGATTTCCATCGCACGTTCTTTATGATCCAAGGC

Coding sequence (CDS)

GATGTCGACATCGACATCGACCTTGACGATGATAATGACAACGACAATAGCAACGACAAATCCCCTGCCAACACTGACCTCTTACCTCCCCTGCCTTTGTCGGGAAGGAAGAGGGAGGCGGTGGAGGGGAGACCGGGTGGAGGTGGAGAGTCGACCGAACATGAAATTCATATTTGGACGGAGAGGGAGAGGAGGAAGAGGATGAGGAATATGTTCTCTAATCTTCATGCTTTGATTCCTCACCTTCCTCCTAAGGCGGACAAATCAACTATAGTGGACGAAGCAGTAAACTACATAAAAACCGTACAACAAACCCTTCAAACACTCTACAACCAAAAGCTCGAAAAGCTCCAAAACAACAATCCAGCTGTGAGTTACAAGGCTACTCATTATTATCCTGAGCAACAACAGCAACAACAACAATCCAACTCAACCACCACAACCCACCAAGCTTTCTTGGCCGATCAAGCTTCTTCCTCCAACGGCATGTCCTCCACTCTTCTTCCACCACCACCACTGCCGCCACTGCCGCCTCCCTTTTCTGATACTACTACAACGTTTCAGACTTGGACTTCCTCCAACCTCGTATTAAGTATTTGCGGCGGCGAAGCCCATTTCTGCATCTGCTCTGTTAAGAAGTCTGGCTTGTTCGCCGCCGTTTGTTATATTCTTGATAAGCATCAGATCGAGGTCGTTTCGGCTCATGTCTCTTCGGATTTCCATCGCACGTTCTTTATGATCCAAGGC

Protein sequence

DVDIDIDLDDDNDNDNSNDKSPANTDLLPPLPLSGRKREAVEGRPGGGGESTEHEIHIWTERERRKRMRNMFSNLHALIPHLPPKADKSTIVDEAVNYIKTVQQTLQTLYNQKLEKLQNNNPAVSYKATHYYPEQQQQQQQSNSTTTTHQAFLADQASSSNGMSSTLLPPPPLPPLPPPFSDTTTTFQTWTSSNLVLSICGGEAHFCICSVKKSGLFAAVCYILDKHQIEVVSAHVSSDFHRTFFMIQG

Homology

[Close]

BLAST of Cp4.1LG04g08060 vs. ExPASy Swiss-Prot
Match: Q9FXA3 (Transcription factor bHLH95 OS=Arabidopsis thaliana OX=3702 GN=BHLH95 PE=2 SV=2)

HSP 1 Score: 165.6 bits (418), Expect = 7.1e-40
Identity = 101/215 (46.98%), Postives = 135/215 (62.79%), Query Frame = 0


Query: 50  ESTEHEIHIWTERERRKRMRNMFSNLHALIPHLPPKADKSTIVDEAVNYIKTVQQTLQTL 109
           ES +HEIHIWTERERRK+MR+MFS LHAL+P LPPKADKSTIVDEAV+ IK+++QTLQ L
Sbjct: 67  ESPDHEIHIWTERERRKKMRDMFSKLHALLPQLPPKADKSTIVDEAVSSIKSLEQTLQKL 126

Query: 110 YNQKLEKLQNNNPAVSYKAT---HYYPEQQQQQQQSNSTTTTH------------QAFLA 169
             QKLEKLQ ++ + +   T    Y P          +  + H             AFLA
Sbjct: 127 EMQKLEKLQYSSASTNTTPTTTFAYAPSSSSSPTALLTPISNHPIDATATDSYPRAAFLA 186

Query: 170 DQASSSNGMSSTLLPPPPLPPLPPPFSDTTTTFQTWTSSNLVLSICGGEAHFCICSVK-K 229
           DQ SSS+  ++          LP P +D    F TW+S N+VL+ICG EA F +C  K K
Sbjct: 187 DQVSSSSAAAAN---------LPYPCNDPIVNFDTWSSRNVVLTICGNEAFFNLCVPKHK 246

Query: 230 SGLFAAVCYILDKHQIEVVSAHVSSDFHRTFFMIQ 249
            G+F +VCY+ +K+ +EV+ A+VSS+   + ++IQ
Sbjct: 247 PGVFTSVCYLFEKYNMEVLFANVSSNVFWSTYVIQ 272

[Close]

BLAST of Cp4.1LG04g08060 vs. ExPASy Swiss-Prot
Match: Q700E4 (Transcription factor bHLH67 OS=Arabidopsis thaliana OX=3702 GN=BHLH67 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 7.9e-07
Identity = 34/106 (32.08%), Postives = 60/106 (56.60%), Query Frame = 0


Query: 28  LPPLPLSGRKREAVEGRPGGGGESTEHE--IHIWTERERRKRMRNMFSNLHALI-PHLPP 87
           L P  ++  KR+  + +P    E  E++   HI  ER RR++M    ++L AL+ P    
Sbjct: 149 LLPQEMTREKRKRRKTKPSKNNEEIENQRINHIAVERNRRRQMNEHINSLRALLPPSYIQ 208

Query: 88  KADKSTIVDEAVNYIKTVQQTLQTLYNQKLEKLQNNNPAVSYKATH 131
           + D+++IV  A+NY+K ++Q +Q+L +QK  + Q+N+  V     H
Sbjct: 209 RGDQASIVGGAINYVKVLEQIIQSLESQKRTQQQSNSEVVENALNH 254

[Close]

BLAST of Cp4.1LG04g08060 vs. ExPASy Swiss-Prot
Match: Q84LH8 (Transcription factor PIF5 OS=Arabidopsis thaliana OX=3702 GN=PIF5 PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 3.3e-05
Identity = 26/67 (38.81%), Postives = 40/67 (59.70%), Query Frame = 0


Query: 44  RPGGGGESTEHEIHIWTERERRKRMRNMFSNLHALIPHLPPKADKSTIVDEAVNYIKTVQ 103
           R G    S   E+H  +ER RR R+      L  LIPH   + DK++I+DEA++Y+K++Q
Sbjct: 248 RSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHC-SRTDKASILDEAIDYLKSLQ 307

Query: 104 QTLQTLY 111
             LQ ++
Sbjct: 308 MQLQVMW 313

[Close]

BLAST of Cp4.1LG04g08060 vs. ExPASy Swiss-Prot
Match: Q1PF16 (Transcription factor bHLH19 OS=Arabidopsis thaliana OX=3702 GN=BHLH19 PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 2.1e-04
Identity = 28/79 (35.44%), Postives = 49/79 (62.03%), Query Frame = 0


Query: 57  HIWTERERRKRMRNMFSNLHALIPHLPPKADKSTIVDEAVNYIKTVQQTLQTLYNQKLEK 116
           H+  ER+RR+++   F  L AL+P L  KADK TI+D+A++ +K +Q+ L+TL  +K   
Sbjct: 120 HVLAERKRREKLSEKFIALSALLPGL-KKADKVTILDDAISRMKQLQEQLRTLKEEKEAT 179

Query: 117 LQNNNPAVSYKATHYYPEQ 136
            Q  +  +  K+  ++ E+
Sbjct: 180 RQMESMILVKKSKVFFDEE 197

[Close]

BLAST of Cp4.1LG04g08060 vs. ExPASy Swiss-Prot
Match: Q8W2F3 (Transcription factor PIF4 OS=Arabidopsis thaliana OX=3702 GN=PIF4 PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 6.2e-04
Identity = 38/120 (31.67%), Postives = 60/120 (50.00%), Query Frame = 0


Query: 44  RPGGGGESTEHEIHIWTERERRKRMRNMFSNLHALIPHLPPKADKSTIVDEAVNYIKTVQ 103
           R G    S   E+H  +ER RR R+      L  LIPH   K DK++I+DEA++Y+K++Q
Sbjct: 249 RSGSNRRSRAAEVHNLSERRRRDRINERMKALQELIPHC-SKTDKASILDEAIDYLKSLQ 308

Query: 104 QTLQTLYNQKLEKLQNNNPAVSYKATHYYPEQQQQQ--QQSNSTTTTHQAFLADQASSSN 162
             LQ ++      + +   A +  A   +P  Q QQ  +Q  S     +  + DQ++  N
Sbjct: 309 LQLQVMW------MGSGMAAAAASAPMMFPGVQPQQFIRQIQSPVQLPRFPVMDQSAIQN 361

[Close]

BLAST of Cp4.1LG04g08060 vs. NCBI nr
Match: XP_023531698.1 (transcription factor bHLH95-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 489 bits (1260), Expect = 1.32e-173
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 1   DVDIDIDLDDDNDNDNSNDKSPANTDLLPPLPLSGRKREAVEGRPGGGGESTEHEIHIWT 60
           DVDIDIDLDDDNDNDNSNDKSPANTDLLPPLPLSGRKREAVEGRPGGGGESTEHEIHIWT
Sbjct: 16  DVDIDIDLDDDNDNDNSNDKSPANTDLLPPLPLSGRKREAVEGRPGGGGESTEHEIHIWT 75

Query: 61  ERERRKRMRNMFSNLHALIPHLPPKADKSTIVDEAVNYIKTVQQTLQTLYNQKLEKLQNN 120
           ERERRKRMRNMFSNLHALIPHLPPKADKSTIVDEAVNYIKTVQQTLQTLYNQKLEKLQNN
Sbjct: 76  ERERRKRMRNMFSNLHALIPHLPPKADKSTIVDEAVNYIKTVQQTLQTLYNQKLEKLQNN 135

Query: 121 NPAVSYKATHYYPEQQQQQQQSNSTTTTHQAFLADQASSSNGMSSTLLPPPPLPPLPPPF 180
           NPAVSYKATHYYPEQQQQQQQSNSTTTTHQAFLADQASSSNGMSSTLLPPPPLPPLPPPF
Sbjct: 136 NPAVSYKATHYYPEQQQQQQQSNSTTTTHQAFLADQASSSNGMSSTLLPPPPLPPLPPPF 195

Query: 181 SDTTTTFQTWTSSNLVLSICGGEAHFCICSVKKSGLFAAVCYILDKHQIEVVSAHVSSDF 240
           SDTTTTFQTWTSSNLVLSICGGEAHFCICSVKKSGLFAAVCYILDKHQIEVVSAHVSSDF
Sbjct: 196 SDTTTTFQTWTSSNLVLSICGGEAHFCICSVKKSGLFAAVCYILDKHQIEVVSAHVSSDF 255

Query: 241 HRTFFMIQG 249
           HRTFFMIQG
Sbjct: 256 HRTFFMIQG 264

[Close]

BLAST of Cp4.1LG04g08060 vs. NCBI nr
Match: KAG7022449.1 (Transcription factor bHLH95, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 470 bits (1209), Expect = 8.35e-166
Identity = 241/251 (96.02%), Postives = 245/251 (97.61%), Query Frame = 0


Query: 1   DVDIDIDLDDDNDNDNSNDKSPANTDLLPPLPLSGRKREAVEGRPGGGGESTEHEIHIWT 60
           DVDIDIDLDDDNDNDNSNDKSPANTDLLPPLPLSGRKREA EGRPGGGGESTEHEIHIWT
Sbjct: 16  DVDIDIDLDDDNDNDNSNDKSPANTDLLPPLPLSGRKREAAEGRPGGGGESTEHEIHIWT 75

Query: 61  ERERRKRMRNMFSNLHALIPHLPPKADKSTIVDEAVNYIKTVQQTLQTLYNQKLEKLQNN 120
           ERERRKRMRNMFSNLHALIPHLPPKADKSTIVDEAVNYIKTVQQTLQTLYNQKLEKLQNN
Sbjct: 76  ERERRKRMRNMFSNLHALIPHLPPKADKSTIVDEAVNYIKTVQQTLQTLYNQKLEKLQNN 135

Query: 121 NPAVSYKATHYYPEQQQQQQQSNSTTTTHQAFLADQASSSNGMSSTLLPPP--PLPPLPP 180
           NPAVSYKA HY+P+QQQQQQQ +STTTTHQAFLADQASSSNGMSSTLLPPP  PLPPLPP
Sbjct: 136 NPAVSYKAAHYHPQQQQQQQQFSSTTTTHQAFLADQASSSNGMSSTLLPPPLPPLPPLPP 195

Query: 181 PFSDTTTTFQTWTSSNLVLSICGGEAHFCICSVKKSGLFAAVCYILDKHQIEVVSAHVSS 240
           PFSDTTTTFQTWTSS+LVL ICGGEAHFCICSVKKSGLFAAVCYILDKHQIEVVSAHVSS
Sbjct: 196 PFSDTTTTFQTWTSSHLVLCICGGEAHFCICSVKKSGLFAAVCYILDKHQIEVVSAHVSS 255

Query: 241 DFHRTFFMIQG 249
           DFHRTFFMIQG
Sbjct: 256 DFHRTFFMIQG 266

[Close]

BLAST of Cp4.1LG04g08060 vs. NCBI nr
Match: XP_022927859.1 (transcription factor bHLH95-like [Cucurbita moschata])

HSP 1 Score: 469 bits (1207), Expect = 1.51e-165
Identity = 241/249 (96.79%), Postives = 245/249 (98.39%), Query Frame = 0


Query: 1   DVDIDIDLDDDNDNDNSNDKSPANTDLLPPLPLSGRKREAVEGRPGGGGESTEHEIHIWT 60
           DVDIDIDLDDDNDNDNSNDKSPANTDLLPPLPLSGRKREAVEGRPGGGGESTEHEIHIWT
Sbjct: 16  DVDIDIDLDDDNDNDNSNDKSPANTDLLPPLPLSGRKREAVEGRPGGGGESTEHEIHIWT 75

Query: 61  ERERRKRMRNMFSNLHALIPHLPPKADKSTIVDEAVNYIKTVQQTLQTLYNQKLEKLQNN 120
           ERERRKRMRNMFSNLHALIPHLPPKADKSTIVDEAVNYIKTVQQTLQTLYNQKLEKLQNN
Sbjct: 76  ERERRKRMRNMFSNLHALIPHLPPKADKSTIVDEAVNYIKTVQQTLQTLYNQKLEKLQNN 135

Query: 121 NPAVSYKATHYYPEQQQQQQQSNSTTTTHQAFLADQASSSNGMSSTLLPPPPLPPLPPPF 180
           NPAVSYKA HY+P+QQQQQQQS+STTTTHQAFL DQASSSNGMSSTLLP P LPPLPPPF
Sbjct: 136 NPAVSYKAAHYHPQQQQQQQQSSSTTTTHQAFLTDQASSSNGMSSTLLPSP-LPPLPPPF 195

Query: 181 SDTTTTFQTWTSSNLVLSICGGEAHFCICSVKKSGLFAAVCYILDKHQIEVVSAHVSSDF 240
           SDTTTTFQTWTSS+LVLSICGGEAHFCICSVKKSGLFAAVCYILDKHQIEVVSAHVSSDF
Sbjct: 196 SDTTTTFQTWTSSHLVLSICGGEAHFCICSVKKSGLFAAVCYILDKHQIEVVSAHVSSDF 255

Query: 241 HRTFFMIQG 249
           HRTFFMIQG
Sbjct: 256 HRTFFMIQG 263

[Close]

BLAST of Cp4.1LG04g08060 vs. NCBI nr
Match: KAG6588663.1 (Transcription factor basic helix-loop-helix 95, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 470 bits (1209), Expect = 2.29e-165
Identity = 241/251 (96.02%), Postives = 245/251 (97.61%), Query Frame = 0


Query: 1   DVDIDIDLDDDNDNDNSNDKSPANTDLLPPLPLSGRKREAVEGRPGGGGESTEHEIHIWT 60
           DVDIDIDLDDDNDNDNSNDKSPANTDLLPPLPLSGRKREA EGRPGGGGESTEHEIHIWT
Sbjct: 16  DVDIDIDLDDDNDNDNSNDKSPANTDLLPPLPLSGRKREAAEGRPGGGGESTEHEIHIWT 75

Query: 61  ERERRKRMRNMFSNLHALIPHLPPKADKSTIVDEAVNYIKTVQQTLQTLYNQKLEKLQNN 120
           ERERRKRMRNMFSNLHALIPHLPPKADKSTIVDEAVNYIKTVQQTLQTLYNQKLEKLQNN
Sbjct: 76  ERERRKRMRNMFSNLHALIPHLPPKADKSTIVDEAVNYIKTVQQTLQTLYNQKLEKLQNN 135

Query: 121 NPAVSYKATHYYPEQQQQQQQSNSTTTTHQAFLADQASSSNGMSSTLLPPP--PLPPLPP 180
           NPAVSYKA HY+P+QQQQQQQ +STTTTHQAFLADQASSSNGMSSTLLPPP  PLPPLPP
Sbjct: 136 NPAVSYKAAHYHPQQQQQQQQFSSTTTTHQAFLADQASSSNGMSSTLLPPPLPPLPPLPP 195

Query: 181 PFSDTTTTFQTWTSSNLVLSICGGEAHFCICSVKKSGLFAAVCYILDKHQIEVVSAHVSS 240
           PFSDTTTTFQTWTSS+LVL ICGGEAHFCICSVKKSGLFAAVCYILDKHQIEVVSAHVSS
Sbjct: 196 PFSDTTTTFQTWTSSHLVLCICGGEAHFCICSVKKSGLFAAVCYILDKHQIEVVSAHVSS 255

Query: 241 DFHRTFFMIQG 249
           DFHRTFFMIQG
Sbjct: 256 DFHRTFFMIQG 266

[Close]

BLAST of Cp4.1LG04g08060 vs. NCBI nr
Match: XP_022988868.1 (transcription factor bHLH95-like [Cucurbita maxima])

HSP 1 Score: 421 bits (1082), Expect = 1.43e-146
Identity = 222/249 (89.16%), Postives = 229/249 (91.97%), Query Frame = 0


Query: 1   DVDIDIDLDDDNDNDNSNDKSPANTDLLPPLPLSGRKREAVEGRPGGGGESTEHEIHIWT 60
           D+DIDIDL DDNDNDNSND+SPANTDLLPPLPLSGRKREAVEGRPG G ESTEHEIHIWT
Sbjct: 16  DIDIDIDLVDDNDNDNSNDQSPANTDLLPPLPLSGRKREAVEGRPGRGVESTEHEIHIWT 75

Query: 61  ERERRKRMRNMFSNLHALIPHLPPKADKSTIVDEAVNYIKTVQQTLQTLYNQKLEKLQNN 120
           ERERRK+MRNMFSNLHALIPHLPPKADKSTIVDEAVNYIKTVQQTLQ LY+QKLEKLQNN
Sbjct: 76  ERERRKKMRNMFSNLHALIPHLPPKADKSTIVDEAVNYIKTVQQTLQKLYSQKLEKLQNN 135

Query: 121 NPAVSYKATHYYPEQQQQQQQSNSTTTTHQAFLADQASSSNGMSSTLLPPPPLPPLPPPF 180
           NPA SYKA HY+P    QQQQS+STTTT QAFLADQASSSNGMSSTLLPPP L PL PPF
Sbjct: 136 NPAGSYKAVHYHP----QQQQSSSTTTTRQAFLADQASSSNGMSSTLLPPP-LSPLLPPF 195

Query: 181 SDTTTTFQTWTSSNLVLSICGGEAHFCICSVKKSGLFAAVCYILDKHQIEVVSAHVSSDF 240
            DTTT FQTWTSSNLVLSICGGEAHFCICSVKK GLFAAVCYI+DKHQIEVVSAHVSSDF
Sbjct: 196 YDTTTAFQTWTSSNLVLSICGGEAHFCICSVKKPGLFAAVCYIIDKHQIEVVSAHVSSDF 255

Query: 241 HRTFFMIQG 249
           HR F MIQ 
Sbjct: 256 HRMFIMIQA 259

[Close]

BLAST of Cp4.1LG04g08060 vs. ExPASy TrEMBL
Match: A0A6J1EJ65 (transcription factor bHLH95-like OS=Cucurbita moschata OX=3662 GN=LOC111434629 PE=4 SV=1)

HSP 1 Score: 469 bits (1207), Expect = 7.31e-166
Identity = 241/249 (96.79%), Postives = 245/249 (98.39%), Query Frame = 0


Query: 1   DVDIDIDLDDDNDNDNSNDKSPANTDLLPPLPLSGRKREAVEGRPGGGGESTEHEIHIWT 60
           DVDIDIDLDDDNDNDNSNDKSPANTDLLPPLPLSGRKREAVEGRPGGGGESTEHEIHIWT
Sbjct: 16  DVDIDIDLDDDNDNDNSNDKSPANTDLLPPLPLSGRKREAVEGRPGGGGESTEHEIHIWT 75

Query: 61  ERERRKRMRNMFSNLHALIPHLPPKADKSTIVDEAVNYIKTVQQTLQTLYNQKLEKLQNN 120
           ERERRKRMRNMFSNLHALIPHLPPKADKSTIVDEAVNYIKTVQQTLQTLYNQKLEKLQNN
Sbjct: 76  ERERRKRMRNMFSNLHALIPHLPPKADKSTIVDEAVNYIKTVQQTLQTLYNQKLEKLQNN 135

Query: 121 NPAVSYKATHYYPEQQQQQQQSNSTTTTHQAFLADQASSSNGMSSTLLPPPPLPPLPPPF 180
           NPAVSYKA HY+P+QQQQQQQS+STTTTHQAFL DQASSSNGMSSTLLP P LPPLPPPF
Sbjct: 136 NPAVSYKAAHYHPQQQQQQQQSSSTTTTHQAFLTDQASSSNGMSSTLLPSP-LPPLPPPF 195

Query: 181 SDTTTTFQTWTSSNLVLSICGGEAHFCICSVKKSGLFAAVCYILDKHQIEVVSAHVSSDF 240
           SDTTTTFQTWTSS+LVLSICGGEAHFCICSVKKSGLFAAVCYILDKHQIEVVSAHVSSDF
Sbjct: 196 SDTTTTFQTWTSSHLVLSICGGEAHFCICSVKKSGLFAAVCYILDKHQIEVVSAHVSSDF 255

Query: 241 HRTFFMIQG 249
           HRTFFMIQG
Sbjct: 256 HRTFFMIQG 263

[Close]

BLAST of Cp4.1LG04g08060 vs. ExPASy TrEMBL
Match: A0A6J1JNK3 (transcription factor bHLH95-like OS=Cucurbita maxima OX=3661 GN=LOC111486092 PE=4 SV=1)

HSP 1 Score: 421 bits (1082), Expect = 6.94e-147
Identity = 222/249 (89.16%), Postives = 229/249 (91.97%), Query Frame = 0


Query: 1   DVDIDIDLDDDNDNDNSNDKSPANTDLLPPLPLSGRKREAVEGRPGGGGESTEHEIHIWT 60
           D+DIDIDL DDNDNDNSND+SPANTDLLPPLPLSGRKREAVEGRPG G ESTEHEIHIWT
Sbjct: 16  DIDIDIDLVDDNDNDNSNDQSPANTDLLPPLPLSGRKREAVEGRPGRGVESTEHEIHIWT 75

Query: 61  ERERRKRMRNMFSNLHALIPHLPPKADKSTIVDEAVNYIKTVQQTLQTLYNQKLEKLQNN 120
           ERERRK+MRNMFSNLHALIPHLPPKADKSTIVDEAVNYIKTVQQTLQ LY+QKLEKLQNN
Sbjct: 76  ERERRKKMRNMFSNLHALIPHLPPKADKSTIVDEAVNYIKTVQQTLQKLYSQKLEKLQNN 135

Query: 121 NPAVSYKATHYYPEQQQQQQQSNSTTTTHQAFLADQASSSNGMSSTLLPPPPLPPLPPPF 180
           NPA SYKA HY+P    QQQQS+STTTT QAFLADQASSSNGMSSTLLPPP L PL PPF
Sbjct: 136 NPAGSYKAVHYHP----QQQQSSSTTTTRQAFLADQASSSNGMSSTLLPPP-LSPLLPPF 195

Query: 181 SDTTTTFQTWTSSNLVLSICGGEAHFCICSVKKSGLFAAVCYILDKHQIEVVSAHVSSDF 240
            DTTT FQTWTSSNLVLSICGGEAHFCICSVKK GLFAAVCYI+DKHQIEVVSAHVSSDF
Sbjct: 196 YDTTTAFQTWTSSNLVLSICGGEAHFCICSVKKPGLFAAVCYIIDKHQIEVVSAHVSSDF 255

Query: 241 HRTFFMIQG 249
           HR F MIQ 
Sbjct: 256 HRMFIMIQA 259

[Close]

BLAST of Cp4.1LG04g08060 vs. ExPASy TrEMBL
Match: A0A5D3C5Y1 (Transcription factor bHLH95-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00510 PE=4 SV=1)

HSP 1 Score: 269 bits (687), Expect = 1.01e-86
Identity = 151/265 (56.98%), Postives = 187/265 (70.57%), Query Frame = 0


Query: 9   DDDNDNDNSNDKSPANTDLLPPLPLS---GRKREAV--EGRPGGGGESTEHEIHIWTERE 68
           DDDN+++N+N  +  NT  LPP P     G+KRE    EG+  G  ES++H+IHIWTERE
Sbjct: 21  DDDNNDENNNSNNNTNTGYLPPPPAPMQVGKKRELETHEGKSAGATESSDHDIHIWTERE 80

Query: 69  RRKRMRNMFSNLHALIPHLPPKADKSTIVDEAVNYIKTVQQTLQTLYNQKLEKLQNN-NP 128
           RRK+MRNMFSNLHAL+PHLPPKADKS+IVDEAVNYIKT+Q+T + L+ QK+EKL NN NP
Sbjct: 81  RRKKMRNMFSNLHALLPHLPPKADKSSIVDEAVNYIKTLQETFERLHKQKVEKLNNNSNP 140

Query: 129 AVSYKATHYYPEQQQQQQQSNSTTTTHQAFLADQASSSNGMSST---------------- 188
           ++S     + P          +  TT +AFLADQASS++ MSS+                
Sbjct: 141 SMSCSKIVHNP----------ALPTTREAFLADQASSNDDMSSSATLLSHLSTTVTPENV 200

Query: 189 --LLPPPPLPPLPPPFSDTTTTFQTWTSSNLVLSICGGEAHFCICSVKKSGLFAAVCYIL 248
             +LPPPP PP PP      + FQTWTSSNLVLS+CG  AHFC+CS KK GLFAA+CY+L
Sbjct: 201 ISILPPPP-PPSPP------SAFQTWTSSNLVLSVCGRHAHFCVCSAKKPGLFAALCYVL 260

[Close]

BLAST of Cp4.1LG04g08060 vs. ExPASy TrEMBL
Match: A0A1S4E152 (transcription factor bHLH95-like OS=Cucumis melo OX=3656 GN=LOC103495238 PE=4 SV=1)

HSP 1 Score: 269 bits (687), Expect = 1.01e-86
Identity = 151/265 (56.98%), Postives = 187/265 (70.57%), Query Frame = 0


Query: 9   DDDNDNDNSNDKSPANTDLLPPLPLS---GRKREAV--EGRPGGGGESTEHEIHIWTERE 68
           DDDN+++N+N  +  NT  LPP P     G+KRE    EG+  G  ES++H+IHIWTERE
Sbjct: 21  DDDNNDENNNSNNNTNTGYLPPPPAPMQVGKKRELETHEGKSAGATESSDHDIHIWTERE 80

Query: 69  RRKRMRNMFSNLHALIPHLPPKADKSTIVDEAVNYIKTVQQTLQTLYNQKLEKLQNN-NP 128
           RRK+MRNMFSNLHAL+PHLPPKADKS+IVDEAVNYIKT+Q+T + L+ QK+EKL NN NP
Sbjct: 81  RRKKMRNMFSNLHALLPHLPPKADKSSIVDEAVNYIKTLQETFERLHKQKVEKLNNNSNP 140

Query: 129 AVSYKATHYYPEQQQQQQQSNSTTTTHQAFLADQASSSNGMSST---------------- 188
           ++S     + P          +  TT +AFLADQASS++ MSS+                
Sbjct: 141 SMSCSKIVHNP----------ALPTTREAFLADQASSNDDMSSSATLLSHLSTTVTPENV 200

Query: 189 --LLPPPPLPPLPPPFSDTTTTFQTWTSSNLVLSICGGEAHFCICSVKKSGLFAAVCYIL 248
             +LPPPP PP PP      + FQTWTSSNLVLS+CG  AHFC+CS KK GLFAA+CY+L
Sbjct: 201 ISILPPPP-PPSPP------SAFQTWTSSNLVLSVCGRHAHFCVCSAKKPGLFAALCYVL 260

[Close]

BLAST of Cp4.1LG04g08060 vs. ExPASy TrEMBL
Match: A0A0A0K4R5 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G073650 PE=4 SV=1)

HSP 1 Score: 259 bits (661), Expect = 7.91e-83
Identity = 147/261 (56.32%), Postives = 184/261 (70.50%), Query Frame = 0


Query: 7   DLDDDNDNDNSNDKSPANTDLLPPLP--LSGRKREA-VEGRPGGGGESTEHEIHIWTERE 66
           D+DDD++N+N  + +  NT  LPP P   +G+KRE   EG+  G  ES++H+IHIWTERE
Sbjct: 18  DIDDDDNNNNHENNNNNNTGYLPPPPPMQAGKKRELETEGKSAGATESSDHDIHIWTERE 77

Query: 67  RRKRMRNMFSNLHALIPHLPPKADKSTIVDEAVNYIKTVQQTLQTLYNQKLEKLQNNN-- 126
           RRK+MRNMFSNLHAL+PHLPPKADKS+IVDEAVNYIKT+Q+T Q L+ QK+EKL NNN  
Sbjct: 78  RRKKMRNMFSNLHALLPHLPPKADKSSIVDEAVNYIKTLQETFQRLHKQKVEKLNNNNNN 137

Query: 127 ---PAVSYKATHYYPEQQQQQQQSNSTTTTHQAFLADQASSSNGMSS----------TLL 186
              P++      ++P             TT +AFLADQASS++ MSS          T+ 
Sbjct: 138 NNNPSMGCSKIVHHP-----------LPTTREAFLADQASSNDDMSSSATLLSHLSTTIT 197

Query: 187 PPPPLPPLPPPFSDTTTTFQTWTSSNLVLSICGGEAHFCICSVKKSGLFAAVCYILDKHQ 246
           P   L  LP P   +   FQTWTSSNLVLS+CG  AHFC+CS KK GLFAA+CY+LDK++
Sbjct: 198 PENVLSNLPLPSPPS--AFQTWTSSNLVLSVCGRHAHFCVCSAKKPGLFAALCYVLDKYR 257

Query: 247 IEVVSAHVSSDFHRTFFMIQG 249
           I+VVSAHVSSD H++FFMIQ 
Sbjct: 258 IDVVSAHVSSDVHQSFFMIQA 265

[Close]

BLAST of Cp4.1LG04g08060 vs. TAIR 10
Match: AT1G49770.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 165.6 bits (418), Expect = 5.0e-41
Identity = 101/215 (46.98%), Postives = 135/215 (62.79%), Query Frame = 0


Query: 50  ESTEHEIHIWTERERRKRMRNMFSNLHALIPHLPPKADKSTIVDEAVNYIKTVQQTLQTL 109
           ES +HEIHIWTERERRK+MR+MFS LHAL+P LPPKADKSTIVDEAV+ IK+++QTLQ L
Sbjct: 67  ESPDHEIHIWTERERRKKMRDMFSKLHALLPQLPPKADKSTIVDEAVSSIKSLEQTLQKL 126

Query: 110 YNQKLEKLQNNNPAVSYKAT---HYYPEQQQQQQQSNSTTTTH------------QAFLA 169
             QKLEKLQ ++ + +   T    Y P          +  + H             AFLA
Sbjct: 127 EMQKLEKLQYSSASTNTTPTTTFAYAPSSSSSPTALLTPISNHPIDATATDSYPRAAFLA 186

Query: 170 DQASSSNGMSSTLLPPPPLPPLPPPFSDTTTTFQTWTSSNLVLSICGGEAHFCICSVK-K 229
           DQ SSS+  ++          LP P +D    F TW+S N+VL+ICG EA F +C  K K
Sbjct: 187 DQVSSSSAAAAN---------LPYPCNDPIVNFDTWSSRNVVLTICGNEAFFNLCVPKHK 246

Query: 230 SGLFAAVCYILDKHQIEVVSAHVSSDFHRTFFMIQ 249
            G+F +VCY+ +K+ +EV+ A+VSS+   + ++IQ
Sbjct: 247 PGVFTSVCYLFEKYNMEVLFANVSSNVFWSTYVIQ 272

[Close]

BLAST of Cp4.1LG04g08060 vs. TAIR 10
Match: AT3G61950.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 55.8 bits (133), Expect = 5.6e-08
Identity = 34/106 (32.08%), Postives = 60/106 (56.60%), Query Frame = 0


Query: 28  LPPLPLSGRKREAVEGRPGGGGESTEHE--IHIWTERERRKRMRNMFSNLHALI-PHLPP 87
           L P  ++  KR+  + +P    E  E++   HI  ER RR++M    ++L AL+ P    
Sbjct: 149 LLPQEMTREKRKRRKTKPSKNNEEIENQRINHIAVERNRRRQMNEHINSLRALLPPSYIQ 208

Query: 88  KADKSTIVDEAVNYIKTVQQTLQTLYNQKLEKLQNNNPAVSYKATH 131
           + D+++IV  A+NY+K ++Q +Q+L +QK  + Q+N+  V     H
Sbjct: 209 RGDQASIVGGAINYVKVLEQIIQSLESQKRTQQQSNSEVVENALNH 254

[Close]

BLAST of Cp4.1LG04g08060 vs. TAIR 10
Match: AT3G61950.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 55.8 bits (133), Expect = 5.6e-08
Identity = 34/106 (32.08%), Postives = 60/106 (56.60%), Query Frame = 0


Query: 28  LPPLPLSGRKREAVEGRPGGGGESTEHE--IHIWTERERRKRMRNMFSNLHALI-PHLPP 87
           L P  ++  KR+  + +P    E  E++   HI  ER RR++M    ++L AL+ P    
Sbjct: 98  LLPQEMTREKRKRRKTKPSKNNEEIENQRINHIAVERNRRRQMNEHINSLRALLPPSYIQ 157

Query: 88  KADKSTIVDEAVNYIKTVQQTLQTLYNQKLEKLQNNNPAVSYKATH 131
           + D+++IV  A+NY+K ++Q +Q+L +QK  + Q+N+  V     H
Sbjct: 158 RGDQASIVGGAINYVKVLEQIIQSLESQKRTQQQSNSEVVENALNH 203

[Close]

BLAST of Cp4.1LG04g08060 vs. TAIR 10
Match: AT3G59060.1 (phytochrome interacting factor 3-like 6 )

HSP 1 Score: 50.4 bits (119), Expect = 2.3e-06
Identity = 26/67 (38.81%), Postives = 40/67 (59.70%), Query Frame = 0


Query: 44  RPGGGGESTEHEIHIWTERERRKRMRNMFSNLHALIPHLPPKADKSTIVDEAVNYIKTVQ 103
           R G    S   E+H  +ER RR R+      L  LIPH   + DK++I+DEA++Y+K++Q
Sbjct: 248 RSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHC-SRTDKASILDEAIDYLKSLQ 307

Query: 104 QTLQTLY 111
             LQ ++
Sbjct: 308 MQLQVMW 313

[Close]

BLAST of Cp4.1LG04g08060 vs. TAIR 10
Match: AT3G59060.2 (phytochrome interacting factor 3-like 6 )

HSP 1 Score: 50.4 bits (119), Expect = 2.3e-06
Identity = 26/67 (38.81%), Postives = 40/67 (59.70%), Query Frame = 0


Query: 44  RPGGGGESTEHEIHIWTERERRKRMRNMFSNLHALIPHLPPKADKSTIVDEAVNYIKTVQ 103
           R G    S   E+H  +ER RR R+      L  LIPH   + DK++I+DEA++Y+K++Q
Sbjct: 248 RSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHC-SRTDKASILDEAIDYLKSLQ 307

Query: 104 QTLQTLY 111
             LQ ++
Sbjct: 308 MQLQVMW 313

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g08060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FXA3	7.1e-40	46.98	Transcription factor bHLH95 OS=Arabidopsis thaliana OX=3702 GN=BHLH95 PE=2 SV=2	[more]
Q700E4	7.9e-07	32.08	Transcription factor bHLH67 OS=Arabidopsis thaliana OX=3702 GN=BHLH67 PE=2 SV=1	[more]
Q84LH8	3.3e-05	38.81	Transcription factor PIF5 OS=Arabidopsis thaliana OX=3702 GN=PIF5 PE=1 SV=1	[more]
Q1PF16	2.1e-04	35.44	Transcription factor bHLH19 OS=Arabidopsis thaliana OX=3702 GN=BHLH19 PE=1 SV=1	[more]
Q8W2F3	6.2e-04	31.67	Transcription factor PIF4 OS=Arabidopsis thaliana OX=3702 GN=PIF4 PE=1 SV=1	[more]

BLAST of Cp4.1LG04g08060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023531698.1	1.32e-173	100.00	transcription factor bHLH95-like [Cucurbita pepo subsp. pepo]	[more]
KAG7022449.1	8.35e-166	96.02	Transcription factor bHLH95, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]
XP_022927859.1	1.51e-165	96.79	transcription factor bHLH95-like [Cucurbita moschata]	[more]
KAG6588663.1	2.29e-165	96.02	Transcription factor basic helix-loop-helix 95, partial [Cucurbita argyrosperma ...	[more]
XP_022988868.1	1.43e-146	89.16	transcription factor bHLH95-like [Cucurbita maxima]	[more]

BLAST of Cp4.1LG04g08060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EJ65	7.31e-166	96.79	transcription factor bHLH95-like OS=Cucurbita moschata OX=3662 GN=LOC111434629 P...	[more]
A0A6J1JNK3	6.94e-147	89.16	transcription factor bHLH95-like OS=Cucurbita maxima OX=3661 GN=LOC111486092 PE=...	[more]
A0A5D3C5Y1	1.01e-86	56.98	Transcription factor bHLH95-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S4E152	1.01e-86	56.98	transcription factor bHLH95-like OS=Cucumis melo OX=3656 GN=LOC103495238 PE=4 SV...	[more]
A0A0A0K4R5	7.91e-83	56.32	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G073650 PE=4 S...	[more]

BLAST of Cp4.1LG04g08060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G49770.1	5.0e-41	46.98	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G61950.1	5.6e-08	32.08	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G61950.2	5.6e-08	32.08	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G59060.1	2.3e-06	38.81	phytochrome interacting factor 3-like 6	[more]
AT3G59060.2	2.3e-06	38.81	phytochrome interacting factor 3-like 6	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 60..108 e-value: 2.4E-8 score: 43.7
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 60..103 e-value: 4.9E-10 score: 39.3
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 52..102 score: 13.172961
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 49..121 e-value: 7.7E-15 score: 56.6
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 53..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 167..181
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 159..182
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..54
None	No IPR available	PANTHER	PTHR46772:SF8	TRANSCRIPTION FACTOR BHLH95	coord: 26..248
None	No IPR available	CDD	cd11393	bHLH_AtbHLH_like	coord: 57..109 e-value: 5.5276E-17 score: 70.6731
IPR044278	Transcription factor BHLH95-like	PANTHER	PTHR46772	FAMILY NOT NAMED	coord: 26..248

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g08060.1	Cp4.1LG04g08060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009960	endosperm development
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity