Cp4.1LG04g07580 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATCATCGCCATAATTTGTTTGTTTCTTCAAATGGGTCTGTGGAATCTGGCTGGACTGTGTACTTGGAGGATTCCTCGTCCATGTTTACTCCAAGAATTCAAAATGAAGAACTGGATTTGTCTATGCTTTCTGATGCTTCTTCTGGTCCTCCAATTTTCCGGGAAAATGAACCTGTTTTCCCGGAAAATGAATCTGGTCGGTGCTTTTGTGATACCACGGCCACACTTTTCCCAAAAGGTAGCCGGAAAATGAAGGGCGGTGACGGCCGACGGCGGCCGGAGCAAACGGCGTCGTTTCTTGATGACACTGCTAGCTCTGATCCCAACTTCAACTTCCATAATTCGGTAGAGAATTTTTAA ATGGATCATCGCCATAATTTGTTTGTTTCTTCAAATGGGTCTGTGGAATCTGGCTGGACTGTGTACTTGGAGGATTCCTCGTCCATGTTTACTCCAAGAATTCAAAATGAAGAACTGGATTTGTCTATGCTTTCTGATGCTTCTTCTGGTCCTCCAATTTTCCGGGAAAATGAACCTGTTTTCCCGGAAAATGAATCTGGTCGGTGCTTTTGTGATACCACGGCCACACTTTTCCCAAAAGGTAGCCGGAAAATGAAGGGCGGTGACGGCCGACGGCGGCCGGAGCAAACGGCGTCGTTTCTTGATGACACTGCTAGCTCTGATCCCAACTTCAACTTCCATAATTCGGTAGAGAATTTTTAA ATGGATCATCGCCATAATTTGTTTGTTTCTTCAAATGGGTCTGTGGAATCTGGCTGGACTGTGTACTTGGAGGATTCCTCGTCCATGTTTACTCCAAGAATTCAAAATGAAGAACTGGATTTGTCTATGCTTTCTGATGCTTCTTCTGGTCCTCCAATTTTCCGGGAAAATGAACCTGTTTTCCCGGAAAATGAATCTGGTCGGTGCTTTTGTGATACCACGGCCACACTTTTCCCAAAAGGTAGCCGGAAAATGAAGGGCGGTGACGGCCGACGGCGGCCGGAGCAAACGGCGTCGTTTCTTGATGACACTGCTAGCTCTGATCCCAACTTCAACTTCCATAATTCGGTAGAGAATTTTTAA MDHRHNLFVSSNGSVESGWTVYLEDSSSMFTPRIQNEELDLSMLSDASSGPPIFRENEPVFPENESGRCFCDTTATLFPKGSRKMKGGDGRRRPEQTASFLDDTASSDPNFNFHNSVENF Homology
BLAST of Cp4.1LG04g07580 vs. ExPASy Swiss-Prot
Match: Q8L9K4 (Protein SOB FIVE-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=SOFL5 PE=2 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 1.0e-04 Identity = 44/136 (32.35%), Postives = 58/136 (42.65%), Query Frame = 0
BLAST of Cp4.1LG04g07580 vs. ExPASy Swiss-Prot
Match: B6IDH8 (Protein SOB FIVE-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=SOFL6 PE=2 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 3.9e-04 Identity = 37/104 (35.58%), Postives = 54/104 (51.92%), Query Frame = 0
BLAST of Cp4.1LG04g07580 vs. NCBI nr
Match: XP_023531126.1 (uncharacterized protein LOC111793463 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 243 bits (621), Expect = 8.31e-81 Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0
BLAST of Cp4.1LG04g07580 vs. NCBI nr
Match: XP_023531125.1 (uncharacterized protein LOC111793463 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 243 bits (621), Expect = 1.02e-80 Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0
BLAST of Cp4.1LG04g07580 vs. NCBI nr
Match: KAG6588718.1 (hypothetical protein SDJN03_17283, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 241 bits (616), Expect = 4.65e-80 Identity = 115/116 (99.14%), Postives = 115/116 (99.14%), Query Frame = 0
BLAST of Cp4.1LG04g07580 vs. NCBI nr
Match: XP_022927878.1 (uncharacterized protein LOC111434644 isoform X2 [Cucurbita moschata]) HSP 1 Score: 240 bits (613), Expect = 1.33e-79 Identity = 114/116 (98.28%), Postives = 115/116 (99.14%), Query Frame = 0
BLAST of Cp4.1LG04g07580 vs. NCBI nr
Match: XP_022927877.1 (uncharacterized protein LOC111434644 isoform X1 [Cucurbita moschata]) HSP 1 Score: 240 bits (613), Expect = 1.63e-79 Identity = 114/116 (98.28%), Postives = 115/116 (99.14%), Query Frame = 0
BLAST of Cp4.1LG04g07580 vs. ExPASy TrEMBL
Match: A0A6J1EMA0 (uncharacterized protein LOC111434644 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111434644 PE=3 SV=1) HSP 1 Score: 240 bits (613), Expect = 6.46e-80 Identity = 114/116 (98.28%), Postives = 115/116 (99.14%), Query Frame = 0
BLAST of Cp4.1LG04g07580 vs. ExPASy TrEMBL
Match: A0A6J1EIF1 (uncharacterized protein LOC111434644 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111434644 PE=3 SV=1) HSP 1 Score: 240 bits (613), Expect = 7.90e-80 Identity = 114/116 (98.28%), Postives = 115/116 (99.14%), Query Frame = 0
BLAST of Cp4.1LG04g07580 vs. ExPASy TrEMBL
Match: A0A6J1JN42 (uncharacterized protein LOC111486186 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111486186 PE=3 SV=1) HSP 1 Score: 233 bits (593), Expect = 7.49e-77 Identity = 113/117 (96.58%), Postives = 114/117 (97.44%), Query Frame = 0
BLAST of Cp4.1LG04g07580 vs. ExPASy TrEMBL
Match: A0A6J1JNX8 (uncharacterized protein LOC111486186 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111486186 PE=3 SV=1) HSP 1 Score: 233 bits (593), Expect = 9.15e-77 Identity = 113/117 (96.58%), Postives = 114/117 (97.44%), Query Frame = 0
BLAST of Cp4.1LG04g07580 vs. ExPASy TrEMBL
Match: A0A5D3C4P0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001310 PE=3 SV=1) HSP 1 Score: 143 bits (360), Expect = 3.59e-41 Identity = 80/138 (57.97%), Postives = 95/138 (68.84%), Query Frame = 0
BLAST of Cp4.1LG04g07580 vs. TAIR 10
Match: AT4G33800.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 47.8 bits (112), Expect = 7.3e-06 Identity = 44/136 (32.35%), Postives = 58/136 (42.65%), Query Frame = 0
BLAST of Cp4.1LG04g07580 vs. TAIR 10
Match: AT1G58460.1 (unknown protein; Has 35 Blast hits to 35 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 45.8 bits (107), Expect = 2.8e-05 Identity = 37/104 (35.58%), Postives = 54/104 (51.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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