Cp4.1LG04g07360 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCATGTGCCATGATCTCGAGTTGCGATGTCGTCGTCAGTCGTACAAGAATGCCTTGCCTTAACTTGAAAAATGTAGTAGCACATGGCTTGAGTATTTAAAGAAATACTCAGTAAGTGACCCCTATCGGGTTTATGCAACAATCACATGCAATGAATGATGGGACCTATCTTTCGTTTCGTTTTCCCTACGGTGCAATCCTAACAGGTAATCGTAGACGTGTATCATATACTTTACACGCAGCTCATACGTGCGAGTATGGGCTCACCAGCTAGTTCGCACACTGCTGGGCCACTGTCCCTAGCCGGTGGGCATGCTCTGGGAGCCCTTATACCGGGACCCGTTAAAACTAGAACCGTCACGGCAGCGCTATGCAGGGCATAACGATCGTTGTCCTGCCATTGGATGTACGCGTTCGTACCCTCGTGATGGGATAGGGGTATCCCCTAAATTCATGAACACACAATATGCATGAGGTCCCACTAGTCCTATAGTTATCATTAATGAACATAACCCCGTGTCACGTTTTCATGCTTACATGTCATTCTCATTCTCATTTCGTTATTGTTAGTGGGGTTATGTTTCATGCAATTTATAGTATTTCATGCATTTTAATGAACTTTTGGTATATTTTTATTTTATAGTTGGCTTTAAAAAATAATTTAATTGTGTTGGTATGAATTTATTTATTTTTTAACTATGTGTATAAATATTGTTTTTTTATTTTTTTATTTTGCACAGTCCAGTCCAGTCCACATGCACAAATATTGGAATCACATCATCAATTTTCAAATGATGATATGATGTTTGCAAGTTAGTTTGAAAAAGAATTAAATTCAAGCCACTCCCGTTCGGTTGCGTCCTCGCTCCTACTGACGAAGAATTATTGAGCTATTATCTTTTCCACAAGATTGTTGGAGAAATCGTTTCACCAATTGCGCTTTTATCGATCTTTACACACAAGAGCCTTCTCCAATATGGCAACAATGTGGAGGGATCGATGACAAAGAAATCTACTTATTCACAACTTCAATATTAAAAAATCTCGTGTTATTGGAAAAGTTGGCTCTAATGGTACCACTCGTACCGTGAAAACAAATGTCAATGAGTATTTTCTTCGGTTAATAATATTCTAATTGGTAGCATCAAACGGTTTCATTACGAGACTTCTAAAGACAAAGTTAATGACAATGATGGTTCTTGGACCATGCGGGAATACACAATTGATCCTACTCTCATACTAAAAGTGTTCGTGTATGATTTTTACCTACTCTCGTCATTGAATACAAAAATCCCTCAAATTGCCCAACAACTACAACAACCCAAACAAACATGTATGATAAAATCTGTACAGTAA ATGCATGTAATCGTAGACGTGTATCATATACTTTACACGCAGCTCATACGTGCGAGTATGGGCTCACCAGCTAGTTCGCACACTGCTGGGCCACTGTCCCTAGCCGTCCAGTCCAGTCCACATGCACAAATATTGGAATCACATCATCAATTTTCAAATGATGATATGATGTTTGCAAATTGTTGGAGAAATCGTTTCACCAATTGCGCTTTTATCGATCTTTACACACAAGAGCCTTCTCCAATATGGCAACAATGTGGAGGGATCGATGACAAAGAAATCTACTTATTCACAACTTCAATATTAAAAAATCTCGTGTTATTGGAAAAGTTGGCTCTAATGGTACCACTCGTACCCATCAAACGGTTTCATTACGAGACTTCTAAAGACAAAGTTAATGACAATGATGGTTCTTGGACCATGCGGGAATACACAATTGATCCTACTCTCATACTAAAAGTGTTCGTGTATGATTTTTACCTACTCTCGTCATTGAATACAAAAATCCCTCAAATTGCCCAACAACTACAACAACCCAAACAAACATGTATGATAAAATCTGTACAGTAA ATGCATGTAATCGTAGACGTGTATCATATACTTTACACGCAGCTCATACGTGCGAGTATGGGCTCACCAGCTAGTTCGCACACTGCTGGGCCACTGTCCCTAGCCGTCCAGTCCAGTCCACATGCACAAATATTGGAATCACATCATCAATTTTCAAATGATGATATGATGTTTGCAAATTGTTGGAGAAATCGTTTCACCAATTGCGCTTTTATCGATCTTTACACACAAGAGCCTTCTCCAATATGGCAACAATGTGGAGGGATCGATGACAAAGAAATCTACTTATTCACAACTTCAATATTAAAAAATCTCGTGTTATTGGAAAAGTTGGCTCTAATGGTACCACTCGTACCCATCAAACGGTTTCATTACGAGACTTCTAAAGACAAAGTTAATGACAATGATGGTTCTTGGACCATGCGGGAATACACAATTGATCCTACTCTCATACTAAAAGTGTTCGTGTATGATTTTTACCTACTCTCGTCATTGAATACAAAAATCCCTCAAATTGCCCAACAACTACAACAACCCAAACAAACATGTATGATAAAATCTGTACAGTAA MHVIVDVYHILYTQLIRASMGSPASSHTAGPLSLAVQSSPHAQILESHHQFSNDDMMFANCWRNRFTNCAFIDLYTQEPSPIWQQCGGIDDKEIYLFTTSILKNLVLLEKLALMVPLVPIKRFHYETSKDKVNDNDGSWTMREYTIDPTLILKVFVYDFYLLSSLNTKIPQIAQQLQQPKQTCMIKSVQ Homology
BLAST of Cp4.1LG04g07360 vs. NCBI nr
Match: KAG7017325.1 (NAC domain-containing protein 96, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 94.4 bits (233), Expect = 2.70e-20 Identity = 48/118 (40.68%), Postives = 68/118 (57.63%), Query Frame = 0
BLAST of Cp4.1LG04g07360 vs. NCBI nr
Match: KAG6580573.1 (NAC domain-containing protein 12, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 93.6 bits (231), Expect = 3.94e-19 Identity = 48/118 (40.68%), Postives = 68/118 (57.63%), Query Frame = 0
BLAST of Cp4.1LG04g07360 vs. NCBI nr
Match: XP_023528741.1 (transcription factor JUNGBRUNNEN 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 94.0 bits (232), Expect = 5.09e-19 Identity = 48/118 (40.68%), Postives = 68/118 (57.63%), Query Frame = 0
BLAST of Cp4.1LG04g07360 vs. NCBI nr
Match: XP_022934631.1 (NAC domain-containing protein 12-like [Cucurbita moschata]) HSP 1 Score: 94.7 bits (234), Expect = 5.91e-19 Identity = 49/118 (41.53%), Postives = 68/118 (57.63%), Query Frame = 0
BLAST of Cp4.1LG04g07360 vs. NCBI nr
Match: XP_038880323.1 (NAC domain-containing protein 96-like [Benincasa hispida]) HSP 1 Score: 86.7 bits (213), Expect = 1.28e-16 Identity = 51/117 (43.59%), Postives = 66/117 (56.41%), Query Frame = 0
BLAST of Cp4.1LG04g07360 vs. ExPASy TrEMBL
Match: A0A6J1F2C3 (NAC domain-containing protein 12-like OS=Cucurbita moschata OX=3662 GN=LOC111441766 PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 2.86e-19 Identity = 49/118 (41.53%), Postives = 68/118 (57.63%), Query Frame = 0
BLAST of Cp4.1LG04g07360 vs. ExPASy TrEMBL
Match: A0A1S3B8F1 (NAC domain-containing protein 105-like OS=Cucumis melo OX=3656 GN=LOC103487127 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 1.01e-14 Identity = 44/120 (36.67%), Postives = 65/120 (54.17%), Query Frame = 0
BLAST of Cp4.1LG04g07360 vs. ExPASy TrEMBL
Match: A0A5A7TSB0 (NAC domain-containing protein 105-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001480 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 7.05e-14 Identity = 42/113 (37.17%), Postives = 62/113 (54.87%), Query Frame = 0
BLAST of Cp4.1LG04g07360 vs. ExPASy TrEMBL
Match: A0A5A7UPM7 (NAC domain-containing protein 105-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00950 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 7.57e-12 Identity = 42/119 (35.29%), Postives = 63/119 (52.94%), Query Frame = 0
BLAST of Cp4.1LG04g07360 vs. ExPASy TrEMBL
Match: A0A5D3BHG6 (NAC domain-containing protein 105-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00980 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 7.57e-12 Identity = 42/119 (35.29%), Postives = 63/119 (52.94%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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