Cp4.1LG04g07000 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG04g07000
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Non-specific lipid-transfer protein-like protein
Location	Cp4.1LG04: 4513764 .. 4514156 (+)
RNA-Seq Expression	Cp4.1LG04g07000
Synteny	Cp4.1LG04g07000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACCGCCAAGCTTTCTCTCTCTCTTTTCGCTCTTTTCGCTCTGGTCGCGAATTACTCCGCCGCATACGGCGCCCTAGTGCCGGAGGGGGACTGTTCGAAACTCATCCTCACTTTGGCCGACTGCCTCCCCTTCGTCTCCAAAGACAGCACCACCACCACTCCCGCTAAAGCCTGCTGTCTCGGCCTTAAAATCGTCGCCAAGGCTAACGCCGATTGCCTCTGTCATACCTTCAAGAAAAGCGCTTCATTAGGTATCGTCCTCAATGTCACCAAGGCTCTTTCTCTCCCTGCCGCTTGCGACATATCCGATCCTGCTCTTTCTGAGTGTAAATGTAAGCCTAATTTCTTCAAAATCGCTCTCTTAATTTCCGATTCGGTAAAGCCCTAG

mRNA sequence

ATGGCCACCGCCAAGCTTTCTCTCTCTCTTTTCGCTCTTTTCGCTCTGGTCGCGAATTACTCCGCCGCATACGGCGCCCTAGTGCCGGAGGGGGACTGTTCGAAACTCATCCTCACTTTGGCCGACTGCCTCCCCTTCGTCTCCAAAGACAGCACCACCACCACTCCCGCTAAAGCCTGCTGTCTCGGCCTTAAAATCGTCGCCAAGGCTAACGCCGATTGCCTCTGTCATACCTTCAAGAAAAGCGCTTCATTAGGTATCGTCCTCAATGTCACCAAGGCTCTTTCTCTCCCTGCCGCTTGCGACATATCCGATCCTGCTCTTTCTGAGTGTAAATGTAAGCCTAATTTCTTCAAAATCGCTCTCTTAATTTCCGATTCGGTAAAGCCCTAG

Coding sequence (CDS)

ATGGCCACCGCCAAGCTTTCTCTCTCTCTTTTCGCTCTTTTCGCTCTGGTCGCGAATTACTCCGCCGCATACGGCGCCCTAGTGCCGGAGGGGGACTGTTCGAAACTCATCCTCACTTTGGCCGACTGCCTCCCCTTCGTCTCCAAAGACAGCACCACCACCACTCCCGCTAAAGCCTGCTGTCTCGGCCTTAAAATCGTCGCCAAGGCTAACGCCGATTGCCTCTGTCATACCTTCAAGAAAAGCGCTTCATTAGGTATCGTCCTCAATGTCACCAAGGCTCTTTCTCTCCCTGCCGCTTGCGACATATCCGATCCTGCTCTTTCTGAGTGTAAATGTAAGCCTAATTTCTTCAAAATCGCTCTCTTAATTTCCGATTCGGTAAAGCCCTAG

Protein sequence

MATAKLSLSLFALFALVANYSAAYGALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKACCLGLKIVAKANADCLCHTFKKSASLGIVLNVTKALSLPAACDISDPALSECKCKPNFFKIALLISDSVKP

Homology

[Close]

BLAST of Cp4.1LG04g07000 vs. ExPASy Swiss-Prot
Match: Q8VYI9 (Non-specific lipid transfer protein GPI-anchored 31 OS=Arabidopsis thaliana OX=3702 GN=LTPG31 PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 5.5e-20
Identity = 53/104 (50.96%), Postives = 67/104 (64.42%), Query Frame = 0


Query: 8   LSLFALFALVANYSAAYGALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKACCLGLKIV 67
           LSL ++  L A++  A  A  P  DCS LIL +ADCL FVS   T   P   CC GLK V
Sbjct: 19  LSLSSVSVLGASHHHA-TAPAPSVDCSTLILNMADCLSFVSSGGTVAKPEGTCCSGLKTV 78

Query: 68  AKANADCLCHTFKKSASLGIVLNVTKALSLPAACDISDPALSEC 112
            KA++ CLC  FK SASLG+ LN+TKA +LPAAC +  P+++ C
Sbjct: 79  LKADSQCLCEAFKSSASLGVTLNITKASTLPAACKLHAPSIATC 121

[Close]

BLAST of Cp4.1LG04g07000 vs. ExPASy Swiss-Prot
Match: Q9ZQI8 (Non-specific lipid transfer protein GPI-anchored 11 OS=Arabidopsis thaliana OX=3702 GN=LTPG11 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.8e-16
Identity = 45/104 (43.27%), Postives = 64/104 (61.54%), Query Frame = 0


Query: 8   LSLFALFALVANYSAAYGALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKACCLGLKIV 67
           L +F++ AL++    A+ A+    DCS LIL +ADCL FV+  ST   P   CC GLK V
Sbjct: 7   LMIFSVVALMSG-ERAHAAV----DCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTV 66

Query: 68  AKANADCLCHTFKKSASLGIVLNVTKALSLPAACDISDPALSEC 112
            +   +CLC  FK S SLG+ L+++KA SLP+ C ++ P  + C
Sbjct: 67  VRTGPECLCEAFKNSGSLGLTLDLSKAASLPSVCKVAAPPSARC 105

[Close]

BLAST of Cp4.1LG04g07000 vs. ExPASy Swiss-Prot
Match: Q9FY78 (Non-specific lipid transfer protein GPI-anchored 29 OS=Arabidopsis thaliana OX=3702 GN=LTPG29 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.3e-13
Identity = 44/104 (42.31%), Postives = 58/104 (55.77%), Query Frame = 0


Query: 12  ALFALVANYSAAYGALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKACCLGLKIVAKAN 71
           +L  LV + S+ Y  +    DC  L++TL  CLPF+S   T  TP  +CC  LK +    
Sbjct: 9   SLLLLVLSVSSPY--VHGASDCDTLVITLFPCLPFISIGGTADTPTASCCSSLKNILDTK 68

Query: 72  ADCLCHTFKKSASLGIVLNVTKALSLPAACDISDPALSECKCKP 116
             CLC   KK A LGI LNVTK+ +LP AC ++ P +S C   P
Sbjct: 69  PICLCEGLKK-APLGIKLNVTKSATLPVACKLNAPPVSACDSLP 109

[Close]

BLAST of Cp4.1LG04g07000 vs. ExPASy Swiss-Prot
Match: Q2PE60 (Non-specific lipid transfer protein GPI-anchored 23 OS=Arabidopsis thaliana OX=3702 GN=LTPG23 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 9.5e-12
Identity = 35/86 (40.70%), Postives = 50/86 (58.14%), Query Frame = 0


Query: 32  DCSKLILTLADCLPFVSKDSTTTTPAKACCLGLKIVAKANADCLCHTFKKSASLGIVLNV 91
           DCS +I ++ DCL F++  ST  +P K CC+G+K V   +  CLC   + S  +G VL+ 
Sbjct: 44  DCSSVIYSMVDCLSFLTVGSTDPSPTKTCCVGVKTVLNYSPKCLCSALESSREMGFVLDD 103

Query: 92  TKALSLPAA--------CDISDPALS 110
           TKAL++P          CD+S PA S
Sbjct: 104 TKALAMPKICNVPIDPNCDVSTPAAS 129

[Close]

BLAST of Cp4.1LG04g07000 vs. ExPASy Swiss-Prot
Match: Q2PE70 (Non-specific lipid transfer protein GPI-anchored 4 OS=Arabidopsis thaliana OX=3702 GN=LTPG4 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 5.2e-10
Identity = 29/73 (39.73%), Postives = 44/73 (60.27%), Query Frame = 0


Query: 32  DCSKLILTLADCLPFVSKDSTTTTPAKACCLGLKIVAKANADCLCHTFKKSASLGIVLNV 91
           DCS +I ++ DCL ++   S  T P K+CC G++ V + N  C+C     +  +GI LN 
Sbjct: 47  DCSTVIYSMMDCLGYLGVGSNETKPEKSCCTGIETVLQYNPQCICAGLVSAGEMGIELNS 106

Query: 92  TKALSLPAACDIS 105
           T+AL+ P AC +S
Sbjct: 107 TRALATPKACKLS 119

[Close]

BLAST of Cp4.1LG04g07000 vs. NCBI nr
Match: KAG7022552.1 (Non-specific lipid-transfer protein-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 237 bits (604), Expect = 4.42e-77
Identity = 120/127 (94.49%), Postives = 122/127 (96.06%), Query Frame = 0


Query: 1   MATAKLSLSLFALFALVANYSAAYGALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC 60
           MATAKLS+SLFALFALV NYS  Y ALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC
Sbjct: 1   MATAKLSISLFALFALVVNYSTVYAALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC 60

Query: 61  CLGLKIVAKANADCLCHTFKKSASLGIVLNVTKALSLPAACDISDPALSECKCKPNFFKI 120
           CLGLKIVAKANADCLCHTFK SASLGIVLNVTKALSLPAACDISDPALSECKCKPNFF+I
Sbjct: 61  CLGLKIVAKANADCLCHTFKNSASLGIVLNVTKALSLPAACDISDPALSECKCKPNFFRI 120

Query: 121 ALLISDS 127
           ALLISDS
Sbjct: 121 ALLISDS 127

[Close]

BLAST of Cp4.1LG04g07000 vs. NCBI nr
Match: XP_023531693.1 (non-specific lipid-transfer protein-like protein At5g64080 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 217 bits (553), Expect = 7.59e-70
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MATAKLSLSLFALFALVANYSAAYGALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC 60
           MATAKLSLSLFALFALVANYSAAYGALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC
Sbjct: 1   MATAKLSLSLFALFALVANYSAAYGALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC 60

Query: 61  CLGLKIVAKANADCLCHTFKKSASLGIVLNVTKALSLPAACDISDPALSECK 112
           CLGLKIVAKANADCLCHTFKKSASLGIVLNVTKALSLPAACDISDPALSECK
Sbjct: 61  CLGLKIVAKANADCLCHTFKKSASLGIVLNVTKALSLPAACDISDPALSECK 112

[Close]

BLAST of Cp4.1LG04g07000 vs. NCBI nr
Match: XP_023531692.1 (non-specific lipid-transfer protein-like protein At5g64080 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 217 bits (553), Expect = 7.84e-70
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MATAKLSLSLFALFALVANYSAAYGALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC 60
           MATAKLSLSLFALFALVANYSAAYGALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC
Sbjct: 1   MATAKLSLSLFALFALVANYSAAYGALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC 60

Query: 61  CLGLKIVAKANADCLCHTFKKSASLGIVLNVTKALSLPAACDISDPALSECK 112
           CLGLKIVAKANADCLCHTFKKSASLGIVLNVTKALSLPAACDISDPALSECK
Sbjct: 61  CLGLKIVAKANADCLCHTFKKSASLGIVLNVTKALSLPAACDISDPALSECK 112

[Close]

BLAST of Cp4.1LG04g07000 vs. NCBI nr
Match: XP_022927863.1 (non-specific lipid-transfer protein-like protein At5g64080 isoform X2 [Cucurbita moschata])

HSP 1 Score: 207 bits (528), Expect = 4.86e-66
Identity = 106/112 (94.64%), Postives = 107/112 (95.54%), Query Frame = 0


Query: 1   MATAKLSLSLFALFALVANYSAAYGALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC 60
           MATAKLS+SLFALFALV NYS  Y ALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC
Sbjct: 1   MATAKLSISLFALFALVVNYSTVYAALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC 60

Query: 61  CLGLKIVAKANADCLCHTFKKSASLGIVLNVTKALSLPAACDISDPALSECK 112
           CLGLKIVAKANADCLCHTFK SASLGIVLNVTKALSLPAACDISDPALSECK
Sbjct: 61  CLGLKIVAKANADCLCHTFKNSASLGIVLNVTKALSLPAACDISDPALSECK 112

[Close]

BLAST of Cp4.1LG04g07000 vs. NCBI nr
Match: XP_022927861.1 (non-specific lipid-transfer protein-like protein At5g64080 isoform X1 [Cucurbita moschata] >KAG6588780.1 Non-specific lipid-transfer protein-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 207 bits (528), Expect = 5.02e-66
Identity = 106/112 (94.64%), Postives = 107/112 (95.54%), Query Frame = 0


Query: 1   MATAKLSLSLFALFALVANYSAAYGALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC 60
           MATAKLS+SLFALFALV NYS  Y ALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC
Sbjct: 1   MATAKLSISLFALFALVVNYSTVYAALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC 60

Query: 61  CLGLKIVAKANADCLCHTFKKSASLGIVLNVTKALSLPAACDISDPALSECK 112
           CLGLKIVAKANADCLCHTFK SASLGIVLNVTKALSLPAACDISDPALSECK
Sbjct: 61  CLGLKIVAKANADCLCHTFKNSASLGIVLNVTKALSLPAACDISDPALSECK 112

[Close]

BLAST of Cp4.1LG04g07000 vs. ExPASy TrEMBL
Match: A0A6J1EM83 (non-specific lipid-transfer protein-like protein At5g64080 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111434631 PE=3 SV=1)

HSP 1 Score: 207 bits (528), Expect = 2.35e-66
Identity = 106/112 (94.64%), Postives = 107/112 (95.54%), Query Frame = 0


Query: 1   MATAKLSLSLFALFALVANYSAAYGALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC 60
           MATAKLS+SLFALFALV NYS  Y ALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC
Sbjct: 1   MATAKLSISLFALFALVVNYSTVYAALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC 60

Query: 61  CLGLKIVAKANADCLCHTFKKSASLGIVLNVTKALSLPAACDISDPALSECK 112
           CLGLKIVAKANADCLCHTFK SASLGIVLNVTKALSLPAACDISDPALSECK
Sbjct: 61  CLGLKIVAKANADCLCHTFKNSASLGIVLNVTKALSLPAACDISDPALSECK 112

[Close]

BLAST of Cp4.1LG04g07000 vs. ExPASy TrEMBL
Match: A0A6J1EIQ5 (non-specific lipid-transfer protein-like protein At5g64080 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111434631 PE=3 SV=1)

HSP 1 Score: 207 bits (528), Expect = 2.43e-66
Identity = 106/112 (94.64%), Postives = 107/112 (95.54%), Query Frame = 0


Query: 1   MATAKLSLSLFALFALVANYSAAYGALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC 60
           MATAKLS+SLFALFALV NYS  Y ALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC
Sbjct: 1   MATAKLSISLFALFALVVNYSTVYAALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC 60

Query: 61  CLGLKIVAKANADCLCHTFKKSASLGIVLNVTKALSLPAACDISDPALSECK 112
           CLGLKIVAKANADCLCHTFK SASLGIVLNVTKALSLPAACDISDPALSECK
Sbjct: 61  CLGLKIVAKANADCLCHTFKNSASLGIVLNVTKALSLPAACDISDPALSECK 112

[Close]

BLAST of Cp4.1LG04g07000 vs. ExPASy TrEMBL
Match: A0A6J1JEH5 (non-specific lipid-transfer protein-like protein At5g64080 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111486172 PE=3 SV=1)

HSP 1 Score: 202 bits (515), Expect = 2.24e-64
Identity = 102/112 (91.07%), Postives = 107/112 (95.54%), Query Frame = 0


Query: 1   MATAKLSLSLFALFALVANYSAAYGALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC 60
           MATAKLS+SLFALF+LV NYS AYGALVPE DCSKLI+TLADCLPFVSKDSTTTTPAKAC
Sbjct: 1   MATAKLSISLFALFSLVVNYSTAYGALVPERDCSKLIITLADCLPFVSKDSTTTTPAKAC 60

Query: 61  CLGLKIVAKANADCLCHTFKKSASLGIVLNVTKALSLPAACDISDPALSECK 112
           C+GLKIVAKANADCLCHTFK SAS GIVLNVTKALSLPAACDISDPALS+CK
Sbjct: 61  CVGLKIVAKANADCLCHTFKNSASFGIVLNVTKALSLPAACDISDPALSDCK 112

[Close]

BLAST of Cp4.1LG04g07000 vs. ExPASy TrEMBL
Match: A0A6J1JIP6 (non-specific lipid-transfer protein-like protein At5g64080 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111486172 PE=3 SV=1)

HSP 1 Score: 202 bits (515), Expect = 2.31e-64
Identity = 102/112 (91.07%), Postives = 107/112 (95.54%), Query Frame = 0


Query: 1   MATAKLSLSLFALFALVANYSAAYGALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC 60
           MATAKLS+SLFALF+LV NYS AYGALVPE DCSKLI+TLADCLPFVSKDSTTTTPAKAC
Sbjct: 1   MATAKLSISLFALFSLVVNYSTAYGALVPERDCSKLIITLADCLPFVSKDSTTTTPAKAC 60

Query: 61  CLGLKIVAKANADCLCHTFKKSASLGIVLNVTKALSLPAACDISDPALSECK 112
           C+GLKIVAKANADCLCHTFK SAS GIVLNVTKALSLPAACDISDPALS+CK
Sbjct: 61  CVGLKIVAKANADCLCHTFKNSASFGIVLNVTKALSLPAACDISDPALSDCK 112

[Close]

BLAST of Cp4.1LG04g07000 vs. ExPASy TrEMBL
Match: A0A6J1HSQ0 (non-specific lipid-transfer protein-like protein At5g64080 OS=Cucurbita maxima OX=3661 GN=LOC111467072 PE=3 SV=1)

HSP 1 Score: 136 bits (343), Expect = 3.40e-38
Identity = 75/115 (65.22%), Postives = 84/115 (73.04%), Query Frame = 0


Query: 1   MATAKLSLSLFALFAL---VANYSAAYGALVPEGDCSKLILTLADCLPFVSKDSTTTTPA 60
           MATAKL L+LFAL  L   ++  SAA+ A  P  DCS LIL +ADCL FVS DSTTT P 
Sbjct: 1   MATAKLFLALFALAVLSLDLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPE 60

Query: 61  KACCLGLKIVAKANADCLCHTFKKSASLGIVLNVTKALSLPAACDISDPALSECK 112
            +CC GLK V KA+ADCLC  FK SA LG+VLNVTKALSLPAAC +S PA S CK
Sbjct: 61  GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCK 115

[Close]

BLAST of Cp4.1LG04g07000 vs. TAIR 10
Match: AT5G64080.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 98.6 bits (244), Expect = 3.9e-21
Identity = 53/104 (50.96%), Postives = 67/104 (64.42%), Query Frame = 0


Query: 8   LSLFALFALVANYSAAYGALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKACCLGLKIV 67
           LSL ++  L A++  A  A  P  DCS LIL +ADCL FVS   T   P   CC GLK V
Sbjct: 19  LSLSSVSVLGASHHHA-TAPAPSVDCSTLILNMADCLSFVSSGGTVAKPEGTCCSGLKTV 78

Query: 68  AKANADCLCHTFKKSASLGIVLNVTKALSLPAACDISDPALSEC 112
            KA++ CLC  FK SASLG+ LN+TKA +LPAAC +  P+++ C
Sbjct: 79  LKADSQCLCEAFKSSASLGVTLNITKASTLPAACKLHAPSIATC 121

[Close]

BLAST of Cp4.1LG04g07000 vs. TAIR 10
Match: AT5G64080.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 98.6 bits (244), Expect = 3.9e-21
Identity = 53/104 (50.96%), Postives = 67/104 (64.42%), Query Frame = 0


Query: 8   LSLFALFALVANYSAAYGALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKACCLGLKIV 67
           LSL ++  L A++  A  A  P  DCS LIL +ADCL FVS   T   P   CC GLK V
Sbjct: 19  LSLSSVSVLGASHHHA-TAPAPSVDCSTLILNMADCLSFVSSGGTVAKPEGTCCSGLKTV 78

Query: 68  AKANADCLCHTFKKSASLGIVLNVTKALSLPAACDISDPALSEC 112
            KA++ CLC  FK SASLG+ LN+TKA +LPAAC +  P+++ C
Sbjct: 79  LKADSQCLCEAFKSSASLGVTLNITKASTLPAACKLHAPSIATC 121

[Close]

BLAST of Cp4.1LG04g07000 vs. TAIR 10
Match: AT2G13820.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 86.3 bits (212), Expect = 2.0e-17
Identity = 45/104 (43.27%), Postives = 64/104 (61.54%), Query Frame = 0


Query: 8   LSLFALFALVANYSAAYGALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKACCLGLKIV 67
           L +F++ AL++    A+ A+    DCS LIL +ADCL FV+  ST   P   CC GLK V
Sbjct: 7   LMIFSVVALMSG-ERAHAAV----DCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTV 66

Query: 68  AKANADCLCHTFKKSASLGIVLNVTKALSLPAACDISDPALSEC 112
            +   +CLC  FK S SLG+ L+++KA SLP+ C ++ P  + C
Sbjct: 67  VRTGPECLCEAFKNSGSLGLTLDLSKAASLPSVCKVAAPPSARC 105

[Close]

BLAST of Cp4.1LG04g07000 vs. TAIR 10
Match: AT2G13820.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 86.3 bits (212), Expect = 2.0e-17
Identity = 45/104 (43.27%), Postives = 64/104 (61.54%), Query Frame = 0


Query: 8   LSLFALFALVANYSAAYGALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKACCLGLKIV 67
           L +F++ AL++    A+ A+    DCS LIL +ADCL FV+  ST   P   CC GLK V
Sbjct: 7   LMIFSVVALMSG-ERAHAAV----DCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTV 66

Query: 68  AKANADCLCHTFKKSASLGIVLNVTKALSLPAACDISDPALSEC 112
            +   +CLC  FK S SLG+ L+++KA SLP+ C ++ P  + C
Sbjct: 67  VRTGPECLCEAFKNSGSLGLTLDLSKAASLPSVCKVAAPPSARC 105

[Close]

BLAST of Cp4.1LG04g07000 vs. TAIR 10
Match: AT5G09370.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 77.4 bits (189), Expect = 9.4e-15
Identity = 44/104 (42.31%), Postives = 58/104 (55.77%), Query Frame = 0


Query: 12  ALFALVANYSAAYGALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKACCLGLKIVAKAN 71
           +L  LV + S+ Y  +    DC  L++TL  CLPF+S   T  TP  +CC  LK +    
Sbjct: 9   SLLLLVLSVSSPY--VHGASDCDTLVITLFPCLPFISIGGTADTPTASCCSSLKNILDTK 68

Query: 72  ADCLCHTFKKSASLGIVLNVTKALSLPAACDISDPALSECKCKP 116
             CLC   KK A LGI LNVTK+ +LP AC ++ P +S C   P
Sbjct: 69  PICLCEGLKK-APLGIKLNVTKSATLPVACKLNAPPVSACDSLP 109

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g07000 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VYI9	5.5e-20	50.96	Non-specific lipid transfer protein GPI-anchored 31 OS=Arabidopsis thaliana OX=3...	[more]
Q9ZQI8	2.8e-16	43.27	Non-specific lipid transfer protein GPI-anchored 11 OS=Arabidopsis thaliana OX=3...	[more]
Q9FY78	1.3e-13	42.31	Non-specific lipid transfer protein GPI-anchored 29 OS=Arabidopsis thaliana OX=3...	[more]
Q2PE60	9.5e-12	40.70	Non-specific lipid transfer protein GPI-anchored 23 OS=Arabidopsis thaliana OX=3...	[more]
Q2PE70	5.2e-10	39.73	Non-specific lipid transfer protein GPI-anchored 4 OS=Arabidopsis thaliana OX=37...	[more]

BLAST of Cp4.1LG04g07000 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7022552.1	4.42e-77	94.49	Non-specific lipid-transfer protein-like protein, partial [Cucurbita argyrosperm...	[more]
XP_023531693.1	7.59e-70	100.00	non-specific lipid-transfer protein-like protein At5g64080 isoform X2 [Cucurbita...	[more]
XP_023531692.1	7.84e-70	100.00	non-specific lipid-transfer protein-like protein At5g64080 isoform X1 [Cucurbita...	[more]
XP_022927863.1	4.86e-66	94.64	non-specific lipid-transfer protein-like protein At5g64080 isoform X2 [Cucurbita...	[more]
XP_022927861.1	5.02e-66	94.64	non-specific lipid-transfer protein-like protein At5g64080 isoform X1 [Cucurbita...	[more]

BLAST of Cp4.1LG04g07000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EM83	2.35e-66	94.64	non-specific lipid-transfer protein-like protein At5g64080 isoform X2 OS=Cucurbi...	[more]
A0A6J1EIQ5	2.43e-66	94.64	non-specific lipid-transfer protein-like protein At5g64080 isoform X1 OS=Cucurbi...	[more]
A0A6J1JEH5	2.24e-64	91.07	non-specific lipid-transfer protein-like protein At5g64080 isoform X2 OS=Cucurbi...	[more]
A0A6J1JIP6	2.31e-64	91.07	non-specific lipid-transfer protein-like protein At5g64080 isoform X1 OS=Cucurbi...	[more]
A0A6J1HSQ0	3.40e-38	65.22	non-specific lipid-transfer protein-like protein At5g64080 OS=Cucurbita maxima O...	[more]

BLAST of Cp4.1LG04g07000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G64080.1	3.9e-21	50.96	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G64080.2	3.9e-21	50.96	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G13820.1	2.0e-17	43.27	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G13820.2	2.0e-17	43.27	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G09370.2	9.4e-15	42.31	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PRINTS	PR00382	LIPIDTRNSFER	coord: 88..105 score: 33.42 coord: 32..48 score: 24.62 coord: 55..69 score: 30.77
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 33..111 e-value: 0.0052 score: 26.0
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 17..111 e-value: 2.8E-12 score: 46.6
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 31..114 e-value: 1.0E-14 score: 56.1
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 32..113
IPR043325	Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein	PANTHER	PTHR33044	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED	coord: 25..114
None	No IPR available	PANTHER	PTHR33044:SF27	OS03G0192600 PROTEIN	coord: 25..114
None	No IPR available	CDD	cd00010	AAI_LTSS	coord: 40..103 e-value: 4.76016E-11 score: 52.8143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g07000.1	Cp4.1LG04g07000.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
cellular_component	GO:0031225	anchored component of membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0008289	lipid binding