Cp4.1LG04g06560 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG04g06560
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	WD repeat-containing protein LWD1
Location	Cp4.1LG04: 5132410 .. 5135786 (+)
RNA-Seq Expression	Cp4.1LG04g06560
Synteny	Cp4.1LG04g06560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCCGACGAGCAGCAGAAGCGGTCTGAGATCTATACCTATGAGGCGCCATGGCACATCTACGCGATGAACTGGAGCGTCCGGCGAGACAAGAAGTACCGGCTGGCAATCGCTAGTCTTCTGGAGCAGTATCCCAACAGGGTGGAGATTGTCCAGCTTGATGATTCCAGCGGCGAGATCCGGTCCGACCCTAACCTCTCCTTTGAGCATCCCTATCCTCCCACCAAGACCATCTTCATTCCAGACAAGGAGTGCCAGCGCCCTGATCTTCTCGCCACTTCCAGCGATTTTCTCCGCGTATGGCGCATCTCAGACGATCCTTCATCTGTGGAGCTCAAGAGTCTTCTTAATGGCAACAAGAACAGCGAGTTTTGTGGCCCTCTAACCTCCTTTGACTGGAACGATGCTGAGCCAAAGCGCATCGGGACCTCCAGTATCGACACGACCTGCACCATTTGGGATATTGAACGCGAGACCGTCGACACGCAACTCATCGCTCATGATAAGGAGGTTTATGACATCGCTTGGGGCGGTGTTGGTGTATTTGCTTCCGTTTCCGCCGATGGTTCTGTCCGCGTCTTCGATTTGCGTGACAAGGAGCACTCTACCATCATCTACGAGAGTTCTGAGCCTGACACTCCATTGGTTCGGCTAGGCTGGAACAAGCAGGACCCGAGATATATGGCCACGATTATCATGGACAGCGCCAAGGTTGTCGTGCTTGACATTCGCTTCCCGACGCTCCCCGTCGTCGAGTTACAGAGGCACCAAGCTAGTGCGAACGCCATTGCATGGGCGCCTCATAGTTCTTGCCACATTTGCACTGCAGGGGATGATTCTCAGGCCTTGATTTGGGATTTGTCGTCCATGGGCCAACCAGTCGAAGGTGGCCTCGATCCCATTCTTGCCTACACCGCTGGAGCAGAAATCGAGCAGCTGCAATGGTCCTCTTCCCAACCGGACTGGGTTGCGATTGCCTTTTCCACTAAGCTTCAGATTCTGAGGGTATGATCCATGTGAGTGATTCCATGTAACTTCTCTACCAGAAAACATAATGGGGTCTACTTGTTCTAGCATGTTCGTTCCATTTCTTTACGCAACAACACTTTGGCCATACTACTAATTGTTGTACAATTCCGCCATGAACCCATAATTTGCCTTCAGCTGTTTGTACTCTGTTCTTTTAACGAAATTTCCTTTTGGTATATGCAGCAACACCTAGCTTTGGTTCTTCACCTACACAGATAGTCATGTCTGAGAACCATCATATGTAACTATGTTCTTGAAACTTGATTCAACACTCGAATTTAGATTTATCCTTCATAGTGATTTCTATATTGATGTTTTTTCTGATGAATATTATCGAACACTTATGAAGTATGAATACTTTGTGCATTTCTCTCAACTTGGAAATTCCTTCTTTCCATACAAAGTTTCTGCTGGATTTAAAGTGTGCTAACTTTCTGTTCTGGAATGGGGAGGAACTTGATGAGAATTAAGTCCATTGTTCGAAGCACATAACCTTATCATCGACGAATGTTAGAATTGACTGATGATAAATTTACACGACGACAAGAATTTAGAAGAGGGAAAATGTTATCTAAAGGTGAAAAGTTTCGAATTCGTCTCGGAAGTTTGTAAGAAAGTGGTAGGATATTCAATCTTTTCTGATCTTTGATTACTTTTTTTCTCATCCACCATTTCAATGAGTGTATGTCATGTAAGTTTATCATCAACAAATTTTAACATTAATCAACAGTGGGGAAAAGCCTGCAGGTGTGCAAGGTGCTGTCTTCACCTTATTTTCCTCAAGTGAGGTGATCACCAATACATGAAGCTTTAAGGTGTTTCCAAGTATTTACTTCAACAGAATTTACTTTTATATGATTTGATGTAGAAGGGCTTATAATTGAAGAACAGGGATGAAAAGGAAGGCTTGTTCCTATCTGCATCTTCGCTCGAGTCTTTTCGGTACCAACCTATAAGCTATCGCCATCAAAGGACTCTGAACCCATCTACACAATCCTCCTCCATGGTATTATCTGCTTTTCTCATTCTTTTTCCTTTCTCCCAGTTCTCACTCTGAAAGTTGAATCAGAACAAACAGGTTAGCCTTTTTGTTTGATTTAATTACTCATCTTTGTAACATTAATCATTTATTATGACAAAATAAGAAAGATTTCTTATTTCTCATGACTTTTCTGTATCTTTAATGTCAAAACACTTCAATTTTGTTTGATAAGTGATATTTTAGACTTACATTCTTCTGCACCTCGGTACATGTTGCACTTTTTAAGAAGATTGCTATATAGTAAAGCTGTGTTGTTCCATAGAAAAGGTAGGAGAGTAAATGGTTTGATCCTTATGAACTTTTTTCTTGGAATAAGCAACTACGTAGAAGAACCAAAATGGAATTTAAGGCCATTATTTACATGCAATAGTGAAATAGATTACAAGAGAGCTCTGTAATCTACCTGTGTTCTTATCTGTTTAGCTTTTAGGGATGCAAGAACAAAAAAGAGTCCAGCATTGCATTTACATCTAATTTTTGGAGTGACAATGGTATGGCTGGTTTTAACTTGATCATGTTTTTTTTTTTTTTCAGTTGACCAGCTTTAGTTCGATGGTCGTTTTGAATTTTCTTTTTGTCGAACTGTCGTGGACTCTTCGAGTTAGTTTTTGCTATGGAGTCAACCAAAAGTCTAGCACCCATTCTACCTTTTATTCCCCTGAATTCTGTGTTTAGAAAGCTAACTCAAGAAGATTAGCAACATGTTTTCTATGATTCACAATTTGGCTGCTGGTTGATGGCTCACACAGATTGAAATCTTTCTTTGAATCTTGTGATGGCATTGCCATTGTGATTCAAACACTAGAAAATTGTAACAGTCCCTACCAAATGAAACATTCACTGATTTTCTGGCCCATTGGCAGTGATTCCTCAACTTAAACCTTACACCCTAATGCGCCATATAACATATCTACTGCAGTCCTAGTGGTGATACCATGCTCATGGTGACATTGCTAAGAGAAGATCTTAAAGGCAAAAATAAACTTTAGGCAGCAATCCCTTCCGACCAGAAGAGTTGAATACAAGGCATTTTCAATCAAAGCTTCGTTCAGGTTCTTCCATCAATAGCCTTGCTTAACTCCTTGTTCGGTAAACTAGTCGCTCGTTGTCAACTTTCTGTTGTCTTTCAATCCATTAATGGTGTGCCAAGGTTACACATCCTTATGTTCAAGACATTTTTTAATTGTTATACATCCTTTACAATTCCTCTTGGTGATAAAATTTTATCTGCTAAGCATATTGAAAATTTAAGTAGACTAGTCCCCTTTGAATCATGGACTTCCATTTATGCACAATTTGCTACC

mRNA sequence

ATGGCTCCGACGAGCAGCAGAAGCGACGATCCTTCATCTGTGGAGCTCAAGAGTCTTCTTAATGGCAACAAGAACAGCGAGTTTTGTGGCCCTCTAACCTCCTTTGACTGGAACGATGCTGAGCCAAAGCGCATCGGGACCTCCAGTATCGACACGACCTGCACCATTTGGGATATTGAACGCGAGACCGTCGACACGCAACTCATCGCTCATGATAAGGAGGTTTATGACATCGCTTGGGGCGGTGTTGGTGTATTTGCTTCCGTTTCCGCCGATGGTTCTGTCCGCGTCTTCGATTTGCGTGACAAGGAGCACTCTACCATCATCTACGAGAGTTCTGAGCCTGACACTCCATTGGTTCGGCTAGGCTGGAACAAGCAGGACCCGAGATATATGGCCACGATTATCATGGACAGCGCCAAGGTTGTCGTGCTTGACATTCGCTTCCCGACGCTCCCCGTCGTCGAGTTACAGAGGCACCAAGCTAGTGCGAACGCCATTGCATGGGCGCCTCATACAACACCTAGCTTTGGTTCTTCACCTACACAGATAGTCATGTCTGAGAACCATCATATGTAACTATGTTCTTGAAACTTGATTCAACACTCGAATTTAGATTTATCCTTCATAGTGATTTCTATATTGATGTTTTTTCTGATGAATATTATCGAACACTTATGAAGTATGAATACTTTGTGCATTTCTCTCAACTTGGAAATTCCTTCTTTCCATACAAAGTTTCTGCTGGATTTAAAGTGTGCTAACTTTCTGTTCTGGAATGGGGAGGAACTTGATGAGAATTAAGTCCATTGTTCGAAGCACATAACCTTATCATCGACGAATGTTAGAATTGACTGATGATAAATTTACACGACGACAAGAATTTAGAAGAGGGAAAATGTTATCTAAAGGTGAAAAGTTTCGAATTCGTCTCGGAAGTTTGTAAGAAAGTGGTAGGATATTCAATCTTTTCTGATCTTTGATTACTTTTTTTCTCATCCACCATTTCAATGAGTGTATGTCATGTAAGTTTATCATCAACAAATTTTAACATTAATCAACAGTGGGGAAAAGCCTGCAGGTGTGCAAGGTGCTGTCTTCACCTTATTTTCCTCAAGTGAGGGATGAAAAGGAAGGCTTGTTCCTATCTGCATCTTCGCTCGAGTCTTTTCGGTACCAACCTATAAGCTATCGCCATCAAAGGACTCTGAACCCATCTACACAATCCTCCTCCATGGTATTATCTGCTTTTCTCATTCTTTTTCCTTTCTCCCAGTTCTCACTCTGAAAGTTGAATCAGAACAAACAGGTTAGCCTTTTTGTTTGATTTAATTACTCATCTTTGTAACATTAATCATTTATTATGACAAAATAAGAAAGATTTCTTATTTCTCATGACTTTTCTGTATCTTTAATGTCAAAACACTTCAATTTTGTTTGATAAGTGATATTTTAGACTTACATTCTTCTGCACCTCGGTACATGTTGCACTTTTTAAGAAGATTGCTATATAGTAAAGCTGTGTTGTTCCATAGAAAAGGTAGGAGAGTAAATGGTTTGATCCTTATGAACTTTTTTCTTGGAATAAGCAACTACGTAGAAGAACCAAAATGGAATTTAAGGCCATTATTTACATGCAATAGTGAAATAGATTACAAGAGAGCTCTGTAATCTACCTGTGTTCTTATCTGTTTAGCTTTTAGGGATGCAAGAACAAAAAAGAGTCCAGCATTGCATTTACATCTAATTTTTGGAGTGACAATGGTATGGCTGGTTTTAACTTGATCATGTTTTTTTTTTTTTTCAGTTGACCAGCTTTAGTTCGATGGTCGTTTTGAATTTTCTTTTTGTCGAACTGTCGTGGACTCTTCGAGTTAGTTTTTGCTATGGAGTCAACCAAAAGTCTAGCACCCATTCTACCTTTTATTCCCCTGAATTCTGTGTTTAGAAAGCTAACTCAAGAAGATTAGCAACATGTTTTCTATGATTCACAATTTGGCTGCTGGTTGATGGCTCACACAGATTGAAATCTTTCTTTGAATCTTGTGATGGCATTGCCATTGTGATTCAAACACTAGAAAATTGTAACAGTCCCTACCAAATGAAACATTCACTGATTTTCTGGCCCATTGGCAGTGATTCCTCAACTTAAACCTTACACCCTAATGCGCCATATAACATATCTACTGCAGTCCTAGTGGTGATACCATGCTCATGGTGACATTGCTAAGAGAAGATCTTAAAGGCAAAAATAAACTTTAGGCAGCAATCCCTTCCGACCAGAAGAGTTGAATACAAGGCATTTTCAATCAAAGCTTCGTTCAGGTTCTTCCATCAATAGCCTTGCTTAACTCCTTGTTCGGTAAACTAGTCGCTCGTTGTCAACTTTCTGTTGTCTTTCAATCCATTAATGGTGTGCCAAGGTTACACATCCTTATGTTCAAGACATTTTTTAATTGTTATACATCCTTTACAATTCCTCTTGGTGATAAAATTTTATCTGCTAAGCATATTGAAAATTTAAGTAGACTAGTCCCCTTTGAATCATGGACTTCCATTTATGCACAATTTGCTACC

Coding sequence (CDS)

ATGGCTCCGACGAGCAGCAGAAGCGACGATCCTTCATCTGTGGAGCTCAAGAGTCTTCTTAATGGCAACAAGAACAGCGAGTTTTGTGGCCCTCTAACCTCCTTTGACTGGAACGATGCTGAGCCAAAGCGCATCGGGACCTCCAGTATCGACACGACCTGCACCATTTGGGATATTGAACGCGAGACCGTCGACACGCAACTCATCGCTCATGATAAGGAGGTTTATGACATCGCTTGGGGCGGTGTTGGTGTATTTGCTTCCGTTTCCGCCGATGGTTCTGTCCGCGTCTTCGATTTGCGTGACAAGGAGCACTCTACCATCATCTACGAGAGTTCTGAGCCTGACACTCCATTGGTTCGGCTAGGCTGGAACAAGCAGGACCCGAGATATATGGCCACGATTATCATGGACAGCGCCAAGGTTGTCGTGCTTGACATTCGCTTCCCGACGCTCCCCGTCGTCGAGTTACAGAGGCACCAAGCTAGTGCGAACGCCATTGCATGGGCGCCTCATACAACACCTAGCTTTGGTTCTTCACCTACACAGATAGTCATGTCTGAGAACCATCATATGTAA

Protein sequence

MAPTSSRSDDPSSVELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHTTPSFGSSPTQIVMSENHHM

Homology

[Close]

BLAST of Cp4.1LG04g06560 vs. ExPASy Swiss-Prot
Match: Q9LPV9 (WD repeat-containing protein LWD1 OS=Arabidopsis thaliana OX=3702 GN=LWD1 PE=2 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 8.6e-86
Identity = 153/167 (91.62%), Postives = 159/167 (95.21%), Query Frame = 0


Query: 8   SDDPSSVELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQ 67
           +DD S VELKS LN NKNSEFCGPLTSFDWN+AEP+RIGTSS DTTCTIWDIERE VDTQ
Sbjct: 114 ADDHSRVELKSCLNSNKNSEFCGPLTSFDWNEAEPRRIGTSSTDTTCTIWDIEREAVDTQ 173

Query: 68  LIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQ 127
           LIAHDKEV+DIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQ
Sbjct: 174 LIAHDKEVFDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQ 233

Query: 128 DPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHTT 175
           DPRYMATIIMDSAKVVVLDIRFP LPVVELQRHQAS NAIAWAPH++
Sbjct: 234 DPRYMATIIMDSAKVVVLDIRFPALPVVELQRHQASVNAIAWAPHSS 280

[Close]

BLAST of Cp4.1LG04g06560 vs. ExPASy Swiss-Prot
Match: Q38960 (WD repeat-containing protein LWD2 OS=Arabidopsis thaliana OX=3702 GN=LWD2 PE=2 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 2.9e-81
Identity = 145/167 (86.83%), Postives = 154/167 (92.22%), Query Frame = 0


Query: 8   SDDPSSVELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQ 67
           SDD S VELKS L+ +KNSEF GP+TSFDWN+AEP+RIGTSSIDTTCTIWDIERE VDTQ
Sbjct: 114 SDDESRVELKSCLSSDKNSEFSGPITSFDWNEAEPRRIGTSSIDTTCTIWDIEREVVDTQ 173

Query: 68  LIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQ 127
           LIAHDKEVYDIAWGGVGVFASVS DGSVRVFDLRDKEHSTIIYES EP TPLVRL WNKQ
Sbjct: 174 LIAHDKEVYDIAWGGVGVFASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQ 233

Query: 128 DPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHTT 175
           DPRYMAT+IM SAK+VVLDIRFP LPVVELQRHQAS NAIAWAPH++
Sbjct: 234 DPRYMATVIMGSAKIVVLDIRFPALPVVELQRHQASVNAIAWAPHSS 280

[Close]

BLAST of Cp4.1LG04g06560 vs. ExPASy Swiss-Prot
Match: Q9XGN1 (Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana OX=3702 GN=TTG1 PE=1 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 5.4e-72
Identity = 132/183 (72.13%), Postives = 151/183 (82.51%), Query Frame = 0


Query: 8   SDDPSSVELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQ 67
           ++D S+VE  S+LN +K SEFC PLTSFDWND EPKR+GT SIDTTCTIWDIE+  V+TQ
Sbjct: 111 NEDSSTVEPISVLNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQ 170

Query: 68  LIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQ 127
           LIAHDKEV+DIAWG   VFASVSADGSVR+FDLRDKEHSTIIYES +PDTPL+RL WNKQ
Sbjct: 171 LIAHDKEVHDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQ 230

Query: 128 DPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHTTPSF--GSSPTQIV 187
           D RYMATI+MDS KVV+LDIR PT+PV EL+RHQAS NAIAWAP +      G   TQ +
Sbjct: 231 DLRYMATILMDSNKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQAL 290

Query: 188 MSE 189
           + E
Sbjct: 291 IWE 293

[Close]

BLAST of Cp4.1LG04g06560 vs. ExPASy Swiss-Prot
Match: P61962 (DDB1- and CUL4-associated factor 7 OS=Homo sapiens OX=9606 GN=DCAF7 PE=1 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 6.2e-52
Identity = 104/178 (58.43%), Postives = 124/178 (69.66%), Query Frame = 0


Query: 12  SSVELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERET-------- 71
           +   L+ LLN NKNS+FC PLTSFDWN+ +P  +GTSSIDTTCTIW +E           
Sbjct: 103 TETRLECLLNNNKNSDFCAPLTSFDWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLV 162

Query: 72  ---VDTQLIAHDKEVYDIAW----GGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPD 131
              V TQLIAHDKEVYDIA+    GG  +FASV ADGSVR+FDLR  EHSTIIYE  +  
Sbjct: 163 SGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQ-H 222

Query: 132 TPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHTT 175
            PL+RL WNKQDP Y+AT+ MD  +VV+LD+R P  PV  L  H+A  N IAWAPH++
Sbjct: 223 HPLLRLCWNKQDPNYLATMAMDGMEVVILDVRVPCTPVARLNNHRACVNGIAWAPHSS 279

[Close]

BLAST of Cp4.1LG04g06560 vs. ExPASy Swiss-Prot
Match: P61963 (DDB1- and CUL4-associated factor 7 OS=Mus musculus OX=10090 GN=Dcaf7 PE=1 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 6.2e-52
Identity = 104/178 (58.43%), Postives = 124/178 (69.66%), Query Frame = 0


Query: 12  SSVELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERET-------- 71
           +   L+ LLN NKNS+FC PLTSFDWN+ +P  +GTSSIDTTCTIW +E           
Sbjct: 103 TETRLECLLNNNKNSDFCAPLTSFDWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLV 162

Query: 72  ---VDTQLIAHDKEVYDIAW----GGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPD 131
              V TQLIAHDKEVYDIA+    GG  +FASV ADGSVR+FDLR  EHSTIIYE  +  
Sbjct: 163 SGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQ-H 222

Query: 132 TPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHTT 175
            PL+RL WNKQDP Y+AT+ MD  +VV+LD+R P  PV  L  H+A  N IAWAPH++
Sbjct: 223 HPLLRLCWNKQDPNYLATMAMDGMEVVILDVRVPCTPVARLNNHRACVNGIAWAPHSS 279

[Close]

BLAST of Cp4.1LG04g06560 vs. NCBI nr
Match: XP_022928340.1 (WD repeat-containing protein LWD1 isoform X2 [Cucurbita moschata] >XP_022989681.1 WD repeat-containing protein LWD1 isoform X2 [Cucurbita maxima] >XP_023529991.1 WD repeat-containing protein LWD1 isoform X2 [Cucurbita pepo subsp. pepo] >KAG7022601.1 WD repeat-containing protein LWD1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 338 bits (867), Expect = 4.95e-114
Identity = 165/167 (98.80%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 8   SDDPSSVELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQ 67
           SDDPSSVELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQ
Sbjct: 114 SDDPSSVELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQ 173

Query: 68  LIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQ 127
           LIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQ
Sbjct: 174 LIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQ 233

Query: 128 DPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHTT 174
           DPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPH++
Sbjct: 234 DPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHSS 280

[Close]

BLAST of Cp4.1LG04g06560 vs. NCBI nr
Match: XP_022928339.1 (WD repeat-containing protein LWD1 isoform X1 [Cucurbita moschata] >XP_022989680.1 WD repeat-containing protein LWD1 isoform X1 [Cucurbita maxima] >XP_023529990.1 WD repeat-containing protein LWD1 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 338 bits (867), Expect = 6.90e-114
Identity = 165/167 (98.80%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 8   SDDPSSVELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQ 67
           SDDPSSVELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQ
Sbjct: 114 SDDPSSVELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQ 173

Query: 68  LIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQ 127
           LIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQ
Sbjct: 174 LIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQ 233

Query: 128 DPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHTT 174
           DPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPH++
Sbjct: 234 DPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHSS 280

[Close]

BLAST of Cp4.1LG04g06560 vs. NCBI nr
Match: XP_022148224.1 (WD repeat-containing protein LWD1 [Momordica charantia])

HSP 1 Score: 337 bits (863), Expect = 2.01e-113
Identity = 164/167 (98.20%), Postives = 166/167 (99.40%), Query Frame = 0


Query: 8   SDDPSSVELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQ 67
           SDDPSSVELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQ
Sbjct: 114 SDDPSSVELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQ 173

Query: 68  LIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQ 127
           LIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQ
Sbjct: 174 LIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQ 233

Query: 128 DPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHTT 174
           DPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQAS NAIAWAPH++
Sbjct: 234 DPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSS 280

[Close]

BLAST of Cp4.1LG04g06560 vs. NCBI nr
Match: XP_004145624.1 (WD repeat-containing protein LWD1 [Cucumis sativus] >XP_016900859.1 PREDICTED: WD repeat-containing protein LWD1 [Cucumis melo] >XP_038901329.1 WD repeat-containing protein LWD1 isoform X2 [Benincasa hispida] >KAA0048529.1 WD repeat-containing protein LWD1-like [Cucumis melo var. makuwa] >KGN57691.1 hypothetical protein Csa_009653 [Cucumis sativus] >TYK28332.1 WD repeat-containing protein LWD1-like [Cucumis melo var. makuwa])

HSP 1 Score: 337 bits (863), Expect = 2.01e-113
Identity = 164/167 (98.20%), Postives = 166/167 (99.40%), Query Frame = 0


Query: 8   SDDPSSVELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQ 67
           SDDPSSVELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQ
Sbjct: 114 SDDPSSVELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQ 173

Query: 68  LIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQ 127
           LIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQ
Sbjct: 174 LIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQ 233

Query: 128 DPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHTT 174
           DPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQAS NAIAWAPH++
Sbjct: 234 DPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSS 280

[Close]

BLAST of Cp4.1LG04g06560 vs. NCBI nr
Match: XP_038901322.1 (WD repeat-containing protein LWD1 isoform X1 [Benincasa hispida])

HSP 1 Score: 337 bits (863), Expect = 2.79e-113
Identity = 164/167 (98.20%), Postives = 166/167 (99.40%), Query Frame = 0


Query: 8   SDDPSSVELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQ 67
           SDDPSSVELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQ
Sbjct: 114 SDDPSSVELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQ 173

Query: 68  LIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQ 127
           LIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQ
Sbjct: 174 LIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQ 233

Query: 128 DPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHTT 174
           DPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQAS NAIAWAPH++
Sbjct: 234 DPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSS 280

[Close]

BLAST of Cp4.1LG04g06560 vs. ExPASy TrEMBL
Match: A0A6J1JKU2 (WD repeat-containing protein LWD1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111486692 PE=4 SV=1)

HSP 1 Score: 338 bits (867), Expect = 2.40e-114
Identity = 165/167 (98.80%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 8   SDDPSSVELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQ 67
           SDDPSSVELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQ
Sbjct: 114 SDDPSSVELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQ 173

Query: 68  LIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQ 127
           LIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQ
Sbjct: 174 LIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQ 233

Query: 128 DPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHTT 174
           DPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPH++
Sbjct: 234 DPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHSS 280

[Close]

BLAST of Cp4.1LG04g06560 vs. ExPASy TrEMBL
Match: A0A6J1ERG2 (WD repeat-containing protein LWD1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111435197 PE=4 SV=1)

HSP 1 Score: 338 bits (867), Expect = 2.40e-114
Identity = 165/167 (98.80%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 8   SDDPSSVELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQ 67
           SDDPSSVELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQ
Sbjct: 114 SDDPSSVELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQ 173

Query: 68  LIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQ 127
           LIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQ
Sbjct: 174 LIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQ 233

Query: 128 DPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHTT 174
           DPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPH++
Sbjct: 234 DPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHSS 280

[Close]

BLAST of Cp4.1LG04g06560 vs. ExPASy TrEMBL
Match: A0A6J1JN20 (WD repeat-containing protein LWD1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111486692 PE=4 SV=1)

HSP 1 Score: 338 bits (867), Expect = 3.34e-114
Identity = 165/167 (98.80%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 8   SDDPSSVELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQ 67
           SDDPSSVELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQ
Sbjct: 114 SDDPSSVELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQ 173

Query: 68  LIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQ 127
           LIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQ
Sbjct: 174 LIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQ 233

Query: 128 DPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHTT 174
           DPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPH++
Sbjct: 234 DPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHSS 280

[Close]

BLAST of Cp4.1LG04g06560 vs. ExPASy TrEMBL
Match: A0A6J1EKJ7 (WD repeat-containing protein LWD1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435197 PE=4 SV=1)

HSP 1 Score: 338 bits (867), Expect = 3.34e-114
Identity = 165/167 (98.80%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 8   SDDPSSVELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQ 67
           SDDPSSVELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQ
Sbjct: 114 SDDPSSVELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQ 173

Query: 68  LIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQ 127
           LIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQ
Sbjct: 174 LIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQ 233

Query: 128 DPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHTT 174
           DPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPH++
Sbjct: 234 DPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHSS 280

[Close]

BLAST of Cp4.1LG04g06560 vs. ExPASy TrEMBL
Match: A0A5D3DXS6 (WD repeat-containing protein LWD1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001620 PE=4 SV=1)

HSP 1 Score: 337 bits (863), Expect = 9.72e-114
Identity = 164/167 (98.20%), Postives = 166/167 (99.40%), Query Frame = 0


Query: 8   SDDPSSVELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQ 67
           SDDPSSVELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQ
Sbjct: 114 SDDPSSVELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQ 173

Query: 68  LIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQ 127
           LIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQ
Sbjct: 174 LIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQ 233

Query: 128 DPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHTT 174
           DPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQAS NAIAWAPH++
Sbjct: 234 DPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSS 280

[Close]

BLAST of Cp4.1LG04g06560 vs. TAIR 10
Match: AT1G12910.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 317.8 bits (813), Expect = 6.1e-87
Identity = 153/167 (91.62%), Postives = 159/167 (95.21%), Query Frame = 0


Query: 8   SDDPSSVELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQ 67
           +DD S VELKS LN NKNSEFCGPLTSFDWN+AEP+RIGTSS DTTCTIWDIERE VDTQ
Sbjct: 114 ADDHSRVELKSCLNSNKNSEFCGPLTSFDWNEAEPRRIGTSSTDTTCTIWDIEREAVDTQ 173

Query: 68  LIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQ 127
           LIAHDKEV+DIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQ
Sbjct: 174 LIAHDKEVFDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQ 233

Query: 128 DPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHTT 175
           DPRYMATIIMDSAKVVVLDIRFP LPVVELQRHQAS NAIAWAPH++
Sbjct: 234 DPRYMATIIMDSAKVVVLDIRFPALPVVELQRHQASVNAIAWAPHSS 280

[Close]

BLAST of Cp4.1LG04g06560 vs. TAIR 10
Match: AT3G26640.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 302.8 bits (774), Expect = 2.0e-82
Identity = 145/167 (86.83%), Postives = 154/167 (92.22%), Query Frame = 0


Query: 8   SDDPSSVELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQ 67
           SDD S VELKS L+ +KNSEF GP+TSFDWN+AEP+RIGTSSIDTTCTIWDIERE VDTQ
Sbjct: 114 SDDESRVELKSCLSSDKNSEFSGPITSFDWNEAEPRRIGTSSIDTTCTIWDIEREVVDTQ 173

Query: 68  LIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQ 127
           LIAHDKEVYDIAWGGVGVFASVS DGSVRVFDLRDKEHSTIIYES EP TPLVRL WNKQ
Sbjct: 174 LIAHDKEVYDIAWGGVGVFASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQ 233

Query: 128 DPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHTT 175
           DPRYMAT+IM SAK+VVLDIRFP LPVVELQRHQAS NAIAWAPH++
Sbjct: 234 DPRYMATVIMGSAKIVVLDIRFPALPVVELQRHQASVNAIAWAPHSS 280

[Close]

BLAST of Cp4.1LG04g06560 vs. TAIR 10
Match: AT5G24520.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 271.9 bits (694), Expect = 3.8e-73
Identity = 132/183 (72.13%), Postives = 151/183 (82.51%), Query Frame = 0


Query: 8   SDDPSSVELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQ 67
           ++D S+VE  S+LN +K SEFC PLTSFDWND EPKR+GT SIDTTCTIWDIE+  V+TQ
Sbjct: 111 NEDSSTVEPISVLNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQ 170

Query: 68  LIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQ 127
           LIAHDKEV+DIAWG   VFASVSADGSVR+FDLRDKEHSTIIYES +PDTPL+RL WNKQ
Sbjct: 171 LIAHDKEVHDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQ 230

Query: 128 DPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHTTPSF--GSSPTQIV 187
           D RYMATI+MDS KVV+LDIR PT+PV EL+RHQAS NAIAWAP +      G   TQ +
Sbjct: 231 DLRYMATILMDSNKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQAL 290

Query: 188 MSE 189
           + E
Sbjct: 291 IWE 293

[Close]

BLAST of Cp4.1LG04g06560 vs. TAIR 10
Match: AT5G24520.3 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 271.9 bits (694), Expect = 3.8e-73
Identity = 132/183 (72.13%), Postives = 151/183 (82.51%), Query Frame = 0


Query: 8   SDDPSSVELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQ 67
           ++D S+VE  S+LN +K SEFC PLTSFDWND EPKR+GT SIDTTCTIWDIE+  V+TQ
Sbjct: 111 NEDSSTVEPISVLNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQ 170

Query: 68  LIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQ 127
           LIAHDKEV+DIAWG   VFASVSADGSVR+FDLRDKEHSTIIYES +PDTPL+RL WNKQ
Sbjct: 171 LIAHDKEVHDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQ 230

Query: 128 DPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHTTPSF--GSSPTQIV 187
           D RYMATI+MDS KVV+LDIR PT+PV EL+RHQAS NAIAWAP +      G   TQ +
Sbjct: 231 DLRYMATILMDSNKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQAL 290

Query: 188 MSE 189
           + E
Sbjct: 291 IWE 293

[Close]

BLAST of Cp4.1LG04g06560 vs. TAIR 10
Match: AT5G24520.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 271.9 bits (694), Expect = 3.8e-73
Identity = 132/183 (72.13%), Postives = 151/183 (82.51%), Query Frame = 0


Query: 8   SDDPSSVELKSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQ 67
           ++D S+VE  S+LN +K SEFC PLTSFDWND EPKR+GT SIDTTCTIWDIE+  V+TQ
Sbjct: 111 NEDSSTVEPISVLNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQ 170

Query: 68  LIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQ 127
           LIAHDKEV+DIAWG   VFASVSADGSVR+FDLRDKEHSTIIYES +PDTPL+RL WNKQ
Sbjct: 171 LIAHDKEVHDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQ 230

Query: 128 DPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASANAIAWAPHTTPSF--GSSPTQIV 187
           D RYMATI+MDS KVV+LDIR PT+PV EL+RHQAS NAIAWAP +      G   TQ +
Sbjct: 231 DLRYMATILMDSNKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQAL 290

Query: 188 MSE 189
           + E
Sbjct: 291 IWE 293

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g06560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LPV9	8.6e-86	91.62	WD repeat-containing protein LWD1 OS=Arabidopsis thaliana OX=3702 GN=LWD1 PE=2 S...	[more]
Q38960	2.9e-81	86.83	WD repeat-containing protein LWD2 OS=Arabidopsis thaliana OX=3702 GN=LWD2 PE=2 S...	[more]
Q9XGN1	5.4e-72	72.13	Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana OX=3702 GN=TTG1 PE=1 ...	[more]
P61962	6.2e-52	58.43	DDB1- and CUL4-associated factor 7 OS=Homo sapiens OX=9606 GN=DCAF7 PE=1 SV=1	[more]
P61963	6.2e-52	58.43	DDB1- and CUL4-associated factor 7 OS=Mus musculus OX=10090 GN=Dcaf7 PE=1 SV=1	[more]

BLAST of Cp4.1LG04g06560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928340.1	4.95e-114	98.80	WD repeat-containing protein LWD1 isoform X2 [Cucurbita moschata] >XP_022989681....	[more]
XP_022928339.1	6.90e-114	98.80	WD repeat-containing protein LWD1 isoform X1 [Cucurbita moschata] >XP_022989680....	[more]
XP_022148224.1	2.01e-113	98.20	WD repeat-containing protein LWD1 [Momordica charantia]	[more]
XP_004145624.1	2.01e-113	98.20	WD repeat-containing protein LWD1 [Cucumis sativus] >XP_016900859.1 PREDICTED: W...	[more]
XP_038901322.1	2.79e-113	98.20	WD repeat-containing protein LWD1 isoform X1 [Benincasa hispida]	[more]

BLAST of Cp4.1LG04g06560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JKU2	2.40e-114	98.80	WD repeat-containing protein LWD1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1ERG2	2.40e-114	98.80	WD repeat-containing protein LWD1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1JN20	3.34e-114	98.80	WD repeat-containing protein LWD1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1EKJ7	3.34e-114	98.80	WD repeat-containing protein LWD1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A5D3DXS6	9.72e-114	98.20	WD repeat-containing protein LWD1-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]

BLAST of Cp4.1LG04g06560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12910.1	6.1e-87	91.62	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G26640.1	2.0e-82	86.83	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G24520.1	3.8e-73	72.13	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G24520.3	3.8e-73	72.13	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G24520.2	3.8e-73	72.13	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 13..58 e-value: 0.57 score: 18.5 coord: 61..99 e-value: 2.6E-4 score: 30.4
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 6..191 e-value: 2.8E-24 score: 87.9
None	No IPR available	PANTHER	PTHR19919	WD REPEAT CONTAINING PROTEIN	coord: 12..174
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 17..172

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g06560.1	Cp4.1LG04g06560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090376	seed trichome differentiation
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding