Cp4.1LG04g05500 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG04g05500
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	LOB domain-containing protein
Location	Cp4.1LG04: 5794118 .. 5794627 (+)
RNA-Seq Expression	Cp4.1LG04g05500
Synteny	Cp4.1LG04g05500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTCTTCCACCTACTCCAATTCTCCTTGTGCAGCCTGCAAGTTCCTACGTCGAAAATGTCTTCCGGGCTGCGTTTTCGCGCCCTATTTCCCGTCGGAGGAGCCACAAAAGTTCGCCAACGTCCACAAGATCTTCGGAGCTAGCAATGTCAGCAAATTACTAAACGAAGTCCAGCCACACCAACGGGAGGACGCCGTGAACTCGCTCGCTTACGAGGCCGAGGCGAGGATGAAAGACCCCGTCTACGGCTGCGTCGGCGCCATCTCGATCCTCCAAAGACAAGTCATCAAGCTTCAAAGAGAACTCGACGCTACCAACGCTAACCTCATTCGCTACGCCTGCAGTGAACTCCCCGCCCCGTCATCGTCGTCGCAGTATGCTCGGAGATCGTCATCGACAAGTCACGTCGGAAGCTCGTCGACCTCTAGCTATGGCCATTACTATTCTGGCCTCTACTTTTGTGGCCCTTGTGGAGATGACCATGACAAAGGAGAAGAACACAAGTAA

mRNA sequence

ATGTCTTCTTCCACCTACTCCAATTCTCCTTGTGCAGCCTGCAAGTTCCTACGTCGAAAATGTCTTCCGGGCTGCGTTTTCGCGCCCTATTTCCCGTCGGAGGAGCCACAAAAGTTCGCCAACGTCCACAAGATCTTCGGAGCTAGCAATGTCAGCAAATTACTAAACGAAGTCCAGCCACACCAACGGGAGGACGCCGTGAACTCGCTCGCTTACGAGGCCGAGGCGAGGATGAAAGACCCCGTCTACGGCTGCGTCGGCGCCATCTCGATCCTCCAAAGACAAGTCATCAAGCTTCAAAGAGAACTCGACGCTACCAACGCTAACCTCATTCGCTACGCCTGCAGTGAACTCCCCGCCCCGTCATCGTCGTCGCAGTATGCTCGGAGATCGTCATCGACAAGTCACGTCGGAAGCTCGTCGACCTCTAGCTATGGCCATTACTATTCTGGCCTCTACTTTTGTGGCCCTTGTGGAGATGACCATGACAAAGGAGAAGAACACAAGTAA

Coding sequence (CDS)

ATGTCTTCTTCCACCTACTCCAATTCTCCTTGTGCAGCCTGCAAGTTCCTACGTCGAAAATGTCTTCCGGGCTGCGTTTTCGCGCCCTATTTCCCGTCGGAGGAGCCACAAAAGTTCGCCAACGTCCACAAGATCTTCGGAGCTAGCAATGTCAGCAAATTACTAAACGAAGTCCAGCCACACCAACGGGAGGACGCCGTGAACTCGCTCGCTTACGAGGCCGAGGCGAGGATGAAAGACCCCGTCTACGGCTGCGTCGGCGCCATCTCGATCCTCCAAAGACAAGTCATCAAGCTTCAAAGAGAACTCGACGCTACCAACGCTAACCTCATTCGCTACGCCTGCAGTGAACTCCCCGCCCCGTCATCGTCGTCGCAGTATGCTCGGAGATCGTCATCGACAAGTCACGTCGGAAGCTCGTCGACCTCTAGCTATGGCCATTACTATTCTGGCCTCTACTTTTGTGGCCCTTGTGGAGATGACCATGACAAAGGAGAAGAACACAAGTAA

Protein sequence

MSSSTYSNSPCAACKFLRRKCLPGCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPAPSSSSQYARRSSSTSHVGSSSTSSYGHYYSGLYFCGPCGDDHDKGEEHK

Homology

[Close]

BLAST of Cp4.1LG04g05500 vs. ExPASy Swiss-Prot
Match: Q8L8Q3 (LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 SV=3)

HSP 1 Score: 197.2 bits (500), Expect = 1.5e-49
Identity = 92/111 (82.88%), Postives = 103/111 (92.79%), Query Frame = 0


Query: 4   STYSNSPCAACKFLRRKCLPGCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQPHQR 63
           S Y+NSPCAACKFLRRKC   CVFAPYFP EEP KFANVH+IFGASNVSK+L+EV PHQR
Sbjct: 33  SNYTNSPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQR 92

Query: 64  EDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYA 115
           EDAVNSLAYEAEAR+KDPVYGCVGAIS+LQRQV++LQREL+ TNA+L+RYA
Sbjct: 93  EDAVNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRYA 143

[Close]

BLAST of Cp4.1LG04g05500 vs. ExPASy Swiss-Prot
Match: Q9FML4 (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 4.3e-49
Identity = 93/115 (80.87%), Postives = 102/115 (88.70%), Query Frame = 0


Query: 2   SSSTYSNSPCAACKFLRRKCLPGCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQPH 61
           SSS   NSPCAACKFLRRKC+PGC+FAPYFP EEP KFANVHKIFGASNV+KLLNE+ PH
Sbjct: 3   SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62

Query: 62  QREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACS 117
           QREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV +LQ+ELDA NA+L  Y  S
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLS 117

[Close]

BLAST of Cp4.1LG04g05500 vs. ExPASy Swiss-Prot
Match: O04479 (Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 5.3e-39
Identity = 87/172 (50.58%), Postives = 116/172 (67.44%), Query Frame = 0


Query: 3   SSTYSNSPCAACKFLRRKCLPGCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQPHQ 62
           +S+ +NSPCAACKFLRRKC P CVFAPYFP ++PQKFANVHK+FGASNV+KLLNE+ P Q
Sbjct: 2   ASSSTNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQ 61

Query: 63  REDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPAPS 122
           REDAVNSLAYEA+ R++DPVYGCVG IS+LQ Q+ +LQ +L    + L +Y    L   +
Sbjct: 62  REDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKY--QSLGILA 121

Query: 123 SSSQYARRSSSTSHVGSSSTSSYGHYYSGLYFCG---------PCGDDHDKG 166
           ++ Q    +        ++T+   HY+   +F           P G+++D G
Sbjct: 122 ATHQSLGINLLAGAADGTATAVRDHYHHHQFFPREQMFGGLDVPAGNNYDGG 171

[Close]

BLAST of Cp4.1LG04g05500 vs. ExPASy Swiss-Prot
Match: A2WXT0 (LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 PE=3 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 7.6e-38
Identity = 74/119 (62.18%), Postives = 94/119 (78.99%), Query Frame = 0


Query: 7   SNSPCAACKFLRRKCLPGCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQPHQREDA 66
           + SPCAACKFLRRKC P CVFAPYFP + PQKF +VH++FGASNV+KLLNE+ P+QREDA
Sbjct: 35  TGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDA 94

Query: 67  VNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPAPSSSS 126
           VNSLAYEA+ R++DPVYGCV  ISILQR + +LQ++L      L +Y  +   A ++S+
Sbjct: 95  VNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQQAAAAAAAASA 153

[Close]

BLAST of Cp4.1LG04g05500 vs. ExPASy Swiss-Prot
Match: Q8LQH4 (LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=LBD6 PE=2 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 7.6e-38
Identity = 74/119 (62.18%), Postives = 94/119 (78.99%), Query Frame = 0


Query: 7   SNSPCAACKFLRRKCLPGCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQPHQREDA 66
           + SPCAACKFLRRKC P CVFAPYFP + PQKF +VH++FGASNV+KLLNE+ P+QREDA
Sbjct: 35  TGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDA 94

Query: 67  VNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPAPSSSS 126
           VNSLAYEA+ R++DPVYGCV  ISILQR + +LQ++L      L +Y  +   A ++S+
Sbjct: 95  VNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQQAAAAAAAASA 153

[Close]

BLAST of Cp4.1LG04g05500 vs. NCBI nr
Match: XP_023530211.1 (LOB domain-containing protein 25-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 340 bits (873), Expect = 5.27e-118
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MSSSTYSNSPCAACKFLRRKCLPGCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQP 60
           MSSSTYSNSPCAACKFLRRKCLPGCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MSSSTYSNSPCAACKFLRRKCLPGCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQP 60

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA
Sbjct: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA 120

Query: 121 PSSSSQYARRSSSTSHVGSSSTSSYGHYYSGLYFCGPCGDDHDKGEEHK 169
           PSSSSQYARRSSSTSHVGSSSTSSYGHYYSGLYFCGPCGDDHDKGEEHK
Sbjct: 121 PSSSSQYARRSSSTSHVGSSSTSSYGHYYSGLYFCGPCGDDHDKGEEHK 169

[Close]

BLAST of Cp4.1LG04g05500 vs. NCBI nr
Match: KAG7022712.1 (LOB domain-containing protein 25, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 333 bits (855), Expect = 3.03e-115
Identity = 168/170 (98.82%), Postives = 168/170 (98.82%), Query Frame = 0


Query: 1   MSSSTYSNSPCAACKFLRRKCLPGCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQP 60
           MSSSTYSNSPCAACKFLRRKCLP CVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MSSSTYSNSPCAACKFLRRKCLPNCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQP 60

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA
Sbjct: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA 120

Query: 121 PSSSS-QYARRSSSTSHVGSSSTSSYGHYYSGLYFCGPCGDDHDKGEEHK 169
           PSSSS QYARRSSSTSHVGSSSTSSYGHYYSGLYFCGPCGDDHDKGEEHK
Sbjct: 121 PSSSSSQYARRSSSTSHVGSSSTSSYGHYYSGLYFCGPCGDDHDKGEEHK 170

[Close]

BLAST of Cp4.1LG04g05500 vs. NCBI nr
Match: XP_022928544.1 (LOB domain-containing protein 25-like [Cucurbita moschata])

HSP 1 Score: 333 bits (853), Expect = 1.19e-114
Identity = 167/171 (97.66%), Postives = 168/171 (98.25%), Query Frame = 0


Query: 1   MSSSTYSNSPCAACKFLRRKCLPGCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQP 60
           MSSSTYSNSPCAACKFLRRKCLP CVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 19  MSSSTYSNSPCAACKFLRRKCLPNCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQP 78

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA
Sbjct: 79  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA 138

Query: 121 PSSSS--QYARRSSSTSHVGSSSTSSYGHYYSGLYFCGPCGDDHDKGEEHK 169
           PSSSS  QYARRSSSTSH+GSSSTSSYGHYYSGLYFCGPCGDDHDKGEEHK
Sbjct: 139 PSSSSSSQYARRSSSTSHIGSSSTSSYGHYYSGLYFCGPCGDDHDKGEEHK 189

[Close]

BLAST of Cp4.1LG04g05500 vs. NCBI nr
Match: KAG6588944.1 (LOB domain-containing protein 25, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 331 bits (849), Expect = 2.49e-114
Identity = 167/170 (98.24%), Postives = 167/170 (98.24%), Query Frame = 0


Query: 1   MSSSTYSNSPCAACKFLRRKCLPGCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQP 60
           MSSSTYSNSPCAACKFLRRKCLP CVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MSSSTYSNSPCAACKFLRRKCLPNCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQP 60

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA
Sbjct: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA 120

Query: 121 PSSSS-QYARRSSSTSHVGSSSTSSYGHYYSGLYFCGPCGDDHDKGEEHK 169
           PSSSS QYARRSSSTSHVGSS TSSYGHYYSGLYFCGPCGDDHDKGEEHK
Sbjct: 121 PSSSSSQYARRSSSTSHVGSSLTSSYGHYYSGLYFCGPCGDDHDKGEEHK 170

[Close]

BLAST of Cp4.1LG04g05500 vs. NCBI nr
Match: XP_022989224.1 (LOB domain-containing protein 25-like [Cucurbita maxima])

HSP 1 Score: 325 bits (834), Expect = 8.45e-112
Identity = 164/169 (97.04%), Postives = 165/169 (97.63%), Query Frame = 0


Query: 1   MSSSTYSNSPCAACKFLRRKCLPGCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQP 60
           MSSSTYSNSPCAACKFLRRKCLP CVFA YFPSEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 19  MSSSTYSNSPCAACKFLRRKCLPNCVFALYFPSEEPQKFANVHKIFGASNVSKLLNEVQP 78

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA
Sbjct: 79  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA 138

Query: 121 PSSSSQYARRSSSTSHVGSSSTSSYGHYYSGLYFCGPCGDDHDKGEEHK 169
           PSSS QYARRSSSTSH+GSSSTSSYGHYYSGLYFC PCGDDHDKGEEHK
Sbjct: 139 PSSS-QYARRSSSTSHIGSSSTSSYGHYYSGLYFCDPCGDDHDKGEEHK 186

[Close]

BLAST of Cp4.1LG04g05500 vs. ExPASy TrEMBL
Match: A0A6J1EL51 (LOB domain-containing protein 25-like OS=Cucurbita moschata OX=3662 GN=LOC111435322 PE=3 SV=1)

HSP 1 Score: 333 bits (853), Expect = 5.77e-115
Identity = 167/171 (97.66%), Postives = 168/171 (98.25%), Query Frame = 0


Query: 1   MSSSTYSNSPCAACKFLRRKCLPGCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQP 60
           MSSSTYSNSPCAACKFLRRKCLP CVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 19  MSSSTYSNSPCAACKFLRRKCLPNCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQP 78

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA
Sbjct: 79  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA 138

Query: 121 PSSSS--QYARRSSSTSHVGSSSTSSYGHYYSGLYFCGPCGDDHDKGEEHK 169
           PSSSS  QYARRSSSTSH+GSSSTSSYGHYYSGLYFCGPCGDDHDKGEEHK
Sbjct: 139 PSSSSSSQYARRSSSTSHIGSSSTSSYGHYYSGLYFCGPCGDDHDKGEEHK 189

[Close]

BLAST of Cp4.1LG04g05500 vs. ExPASy TrEMBL
Match: A0A6J1JNR8 (LOB domain-containing protein 25-like OS=Cucurbita maxima OX=3661 GN=LOC111486365 PE=3 SV=1)

HSP 1 Score: 325 bits (834), Expect = 4.09e-112
Identity = 164/169 (97.04%), Postives = 165/169 (97.63%), Query Frame = 0


Query: 1   MSSSTYSNSPCAACKFLRRKCLPGCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQP 60
           MSSSTYSNSPCAACKFLRRKCLP CVFA YFPSEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 19  MSSSTYSNSPCAACKFLRRKCLPNCVFALYFPSEEPQKFANVHKIFGASNVSKLLNEVQP 78

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA
Sbjct: 79  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA 138

Query: 121 PSSSSQYARRSSSTSHVGSSSTSSYGHYYSGLYFCGPCGDDHDKGEEHK 169
           PSSS QYARRSSSTSH+GSSSTSSYGHYYSGLYFC PCGDDHDKGEEHK
Sbjct: 139 PSSS-QYARRSSSTSHIGSSSTSSYGHYYSGLYFCDPCGDDHDKGEEHK 186

[Close]

BLAST of Cp4.1LG04g05500 vs. ExPASy TrEMBL
Match: A0A6J1DD95 (LOB domain-containing protein 25-like OS=Momordica charantia OX=3673 GN=LOC111019975 PE=3 SV=1)

HSP 1 Score: 304 bits (779), Expect = 1.26e-103
Identity = 157/179 (87.71%), Postives = 163/179 (91.06%), Query Frame = 0


Query: 1   MSSSTYSNSPCAACKFLRRKCLPGCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQP 60
           M+SSTYSNSPCAACKFLRRKCLP CVFAPYFP EEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 15  MASSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 74

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQ+ELDATNANLIRYAC+E+PA
Sbjct: 75  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACNEIPA 134

Query: 121 PS----SSSQYARRSSSTSHVGSSSTSSYGHYYSGLYFC------GPCGDDHDKGEEHK 169
           PS    SSSQYARRSSST+H GSSSTSSYGHYYSGLYF       GPCGD HDKG E+K
Sbjct: 135 PSPSPSSSSQYARRSSSTNHEGSSSTSSYGHYYSGLYFSPWSNNNGPCGDGHDKGGEYK 193

[Close]

BLAST of Cp4.1LG04g05500 vs. ExPASy TrEMBL
Match: A0A5D3BPW0 (LOB domain-containing protein 25-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1545G00030 PE=3 SV=1)

HSP 1 Score: 303 bits (777), Expect = 1.46e-103
Identity = 157/175 (89.71%), Postives = 161/175 (92.00%), Query Frame = 0


Query: 1   MSSSTYSNSPCAACKFLRRKCLPGCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQP 60
           MSSSTYSNSPCAACKFLRRKCLP CVFAPYFP EEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQ+ELDATNA+LIRYACSE+PA
Sbjct: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEMPA 120

Query: 121 PS--SSSQYARRSSSTSHVGSSSTSSYGHYYSGLYFC-------GPCGDDHDKGE 166
           PS  SSSQYARRSSSTSH GSSSTSSYGHYY+GLYF        GPCGD HDKGE
Sbjct: 121 PSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNNNNGPCGDGHDKGE 175

[Close]

BLAST of Cp4.1LG04g05500 vs. ExPASy TrEMBL
Match: A0A1S3B938 (LOB domain-containing protein 25-like OS=Cucumis melo OX=3656 GN=LOC103487119 PE=3 SV=1)

HSP 1 Score: 303 bits (777), Expect = 1.46e-103
Identity = 157/175 (89.71%), Postives = 161/175 (92.00%), Query Frame = 0


Query: 1   MSSSTYSNSPCAACKFLRRKCLPGCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQP 60
           MSSSTYSNSPCAACKFLRRKCLP CVFAPYFP EEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQ+ELDATNA+LIRYACSE+PA
Sbjct: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEMPA 120

Query: 121 PS--SSSQYARRSSSTSHVGSSSTSSYGHYYSGLYFC-------GPCGDDHDKGE 166
           PS  SSSQYARRSSSTSH GSSSTSSYGHYY+GLYF        GPCGD HDKGE
Sbjct: 121 PSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNNNNGPCGDGHDKGE 175

[Close]

BLAST of Cp4.1LG04g05500 vs. TAIR 10
Match: AT3G27650.1 (LOB domain-containing protein 25 )

HSP 1 Score: 197.2 bits (500), Expect = 1.1e-50
Identity = 92/111 (82.88%), Postives = 103/111 (92.79%), Query Frame = 0


Query: 4   STYSNSPCAACKFLRRKCLPGCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQPHQR 63
           S Y+NSPCAACKFLRRKC   CVFAPYFP EEP KFANVH+IFGASNVSK+L+EV PHQR
Sbjct: 33  SNYTNSPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQR 92

Query: 64  EDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYA 115
           EDAVNSLAYEAEAR+KDPVYGCVGAIS+LQRQV++LQREL+ TNA+L+RYA
Sbjct: 93  EDAVNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRYA 143

[Close]

BLAST of Cp4.1LG04g05500 vs. TAIR 10
Match: AT5G63090.2 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 195.7 bits (496), Expect = 3.1e-50
Identity = 93/115 (80.87%), Postives = 102/115 (88.70%), Query Frame = 0


Query: 2   SSSTYSNSPCAACKFLRRKCLPGCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQPH 61
           SSS   NSPCAACKFLRRKC+PGC+FAPYFP EEP KFANVHKIFGASNV+KLLNE+ PH
Sbjct: 3   SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62

Query: 62  QREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACS 117
           QREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV +LQ+ELDA NA+L  Y  S
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLS 117

[Close]

BLAST of Cp4.1LG04g05500 vs. TAIR 10
Match: AT5G63090.3 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 195.7 bits (496), Expect = 3.1e-50
Identity = 93/115 (80.87%), Postives = 102/115 (88.70%), Query Frame = 0


Query: 2   SSSTYSNSPCAACKFLRRKCLPGCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQPH 61
           SSS   NSPCAACKFLRRKC+PGC+FAPYFP EEP KFANVHKIFGASNV+KLLNE+ PH
Sbjct: 3   SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62

Query: 62  QREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACS 117
           QREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV +LQ+ELDA NA+L  Y  S
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLS 117

[Close]

BLAST of Cp4.1LG04g05500 vs. TAIR 10
Match: AT5G63090.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 195.7 bits (496), Expect = 3.1e-50
Identity = 93/115 (80.87%), Postives = 102/115 (88.70%), Query Frame = 0


Query: 2   SSSTYSNSPCAACKFLRRKCLPGCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQPH 61
           SSS   NSPCAACKFLRRKC+PGC+FAPYFP EEP KFANVHKIFGASNV+KLLNE+ PH
Sbjct: 3   SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62

Query: 62  QREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACS 117
           QREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV +LQ+ELDA NA+L  Y  S
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLS 117

[Close]

BLAST of Cp4.1LG04g05500 vs. TAIR 10
Match: AT5G63090.4 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 195.7 bits (496), Expect = 3.1e-50
Identity = 93/115 (80.87%), Postives = 102/115 (88.70%), Query Frame = 0


Query: 2   SSSTYSNSPCAACKFLRRKCLPGCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQPH 61
           SSS   NSPCAACKFLRRKC+PGC+FAPYFP EEP KFANVHKIFGASNV+KLLNE+ PH
Sbjct: 3   SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62

Query: 62  QREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACS 117
           QREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV +LQ+ELDA NA+L  Y  S
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLS 117

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g05500 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L8Q3	1.5e-49	82.88	LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 S...	[more]
Q9FML4	4.3e-49	80.87	Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=...	[more]
O04479	5.3e-39	50.58	Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1	[more]
A2WXT0	7.6e-38	62.18	LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 P...	[more]
Q8LQH4	7.6e-38	62.18	LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=LBD6...	[more]

BLAST of Cp4.1LG04g05500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023530211.1	5.27e-118	100.00	LOB domain-containing protein 25-like [Cucurbita pepo subsp. pepo]	[more]
KAG7022712.1	3.03e-115	98.82	LOB domain-containing protein 25, partial [Cucurbita argyrosperma subsp. argyros...	[more]
XP_022928544.1	1.19e-114	97.66	LOB domain-containing protein 25-like [Cucurbita moschata]	[more]
KAG6588944.1	2.49e-114	98.24	LOB domain-containing protein 25, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_022989224.1	8.45e-112	97.04	LOB domain-containing protein 25-like [Cucurbita maxima]	[more]

BLAST of Cp4.1LG04g05500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EL51	5.77e-115	97.66	LOB domain-containing protein 25-like OS=Cucurbita moschata OX=3662 GN=LOC111435...	[more]
A0A6J1JNR8	4.09e-112	97.04	LOB domain-containing protein 25-like OS=Cucurbita maxima OX=3661 GN=LOC11148636...	[more]
A0A6J1DD95	1.26e-103	87.71	LOB domain-containing protein 25-like OS=Momordica charantia OX=3673 GN=LOC11101...	[more]
A0A5D3BPW0	1.46e-103	89.71	LOB domain-containing protein 25-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3B938	1.46e-103	89.71	LOB domain-containing protein 25-like OS=Cucumis melo OX=3656 GN=LOC103487119 PE...	[more]

BLAST of Cp4.1LG04g05500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G27650.1	1.1e-50	82.88	LOB domain-containing protein 25	[more]
AT5G63090.2	3.1e-50	80.87	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.3	3.1e-50	80.87	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.1	3.1e-50	80.87	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.4	3.1e-50	80.87	Lateral organ boundaries (LOB) domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 89..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..142
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 1..140
None	No IPR available	PANTHER	PTHR31301:SF12	LOB DOMAIN-CONTAINING PROTEIN 25	coord: 1..140
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 10..106 e-value: 3.5E-42 score: 143.0
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 9..110 score: 27.455753

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g05500.1	Cp4.1LG04g05500.1	mRNA