Cp4.1LG04g05420 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG04g05420
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptionzinc finger CCCH domain-containing protein 41-like
LocationCp4.1LG04: 5818866 .. 5829564 (-)
RNA-Seq ExpressionCp4.1LG04g05420
SyntenyCp4.1LG04g05420
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATGGTACAATCGTCGTCTCCTCTCTCTCTCTCTCTATCTTTCTCTCGGTCTAGAATCCTGGTTGCTGTTAACAACTCCGAAGGGGCCTCATACGAGCTCAGGGTTGCAGAGAAACCCTCGTGCTCTCTCTCTCTCTCTCTCGCCGGACCGCCGTTGAATCGCTAAACGACGGCGGTGTTTTCGTTAAACGATCTTGTCTCTTCCGTCGCTTCTGTTCCTCTTCTAATGCCCTTCGTTTTCTCTTCTTGCTTTGCTCGCCGCTAATTCCAGAGCCGAGTATCCTCGCTCTGACTAATTCAAGCATTCCATGGCGCTTTCTTGATCAATTCGTCCGAGAATACTCGGTAACCTATTCGTTTGTTGCTTCTTTACTGCTTTGTGTTTGTTTGTTTGTTCCTTTCCCTCCCTAGTTTCTGCGACTTCGTTTTGTTGTGCACCTGGAGAATTTTGAATTGTTGTGGTTTAGGTTAATTTAGTTTGTCATTGAAGTGATGTATTGTTGAGATTTATTGGACCTATTCGATGCTGAATCATTTGAAGTATGTTATTAAGTTGTTAAGTAGCGTGGGTTTGAATTTCATTAGGGAATAGATGATTAACGAATGCGGCTGAGTTAATTCCGTTTGTTTTTGGTTCTCGTTGTTTGAGGTAATTGATTTATTTCTTTCTTTGTTTCATTAGGTTAAAATAACTCAATATAGTGTTTCAAGTTCTGGATACAAGACCGTAGCTACTTCTAAGGAATAAGGGATTGTTCTGTTTATTGCTGGGAGTCAAATGGAACTGAAAGTTTCATATCCTAAGCCAGACATTTCTTCCTCTGAGTATGTTAGTGACCCGGAGGAAAAGGATATTAGTGATGATGAAGATGATGATCGCAACCATAAGCATAGGAGGCGGGAGACACACTCTCAGTCTTTGGAAACAGATACACGTGAACATGATTTGAGGCCATATGGAAAGCGCAGTAAACCTTTTGAAAATGGACGTAGTTTTAGGGACAACGATTCTCAAGCGAATGAAGCTTGGAAATCCTTCAATTCTTCCACTCTTGAGAAAGACATCCCTGGGAAGTTTGATAAAAGACGCCTAGGTGGAGTGCCAGGTTCTCGAGTGGCTGGGGATTTCAATCAAAGGATCAGGGCAAACCAGGCGTTTTCTAGTGACCTAAGTTTTGGTAGGGGAAGAGGCAGGGAGTCTGCTCCTTGGAACCAGTTTGATTCAAGGTTTAGTCCTGTTGATATTGCTTCCCAAATTGTTCACCATGGGCCTTTTCCTCCGAGGCTATTTGCTGGAAGGGGTTTACCAAGTGTTTCTACTTCACAAACTGCACCATGGAATACATTTGGATTAATACCAGGAATTCCGAATGGTGGGCTAGAACCGATGCACTCTATTGGTTTTCAGGGAACACTTAGGCCTCCGATCAACCCTTCTCTGAACATTGGCATGCCTCGTCAGAGATGTAGAGATTTTGAGGAACGTGGATTCTGTCTTAGAGGAGACATGTGTCCAATGGAGCATGGAACTAATCGCATTGTAGTTGAGGATGTCCAGGTATGTATATCACCCATTTTACTGTATTTTACTGAGCATGATGTTTGATTAGAATGAAACCATAATCTGTTTGGCCTCCCATACAAGGGACACCCAGGTTATATTACATCTTTGAAGGACATTTTTTCTAACATCATCTTGATAATATATTTTTCATTTTTTTCCTGACATTATTTAGAACATAACTTAAGGTGTTGTGGCTATATATCTACTTGGCACTGCCAATTATTGAAAGCATCAATTTTGGTGTCCTTAAATTCCAAGTTTGCTTCGTTAGAATGATATTGTTATCTTTGGTCCAAACTTCAAAGATGAAATTCTTAATCCAACTCTTCCATGAGATTCCTTGATAAACCTCAATCAATTTTATTTATGCACAGAGCTACAAGCCAAGTGGATATTTTAGAGCTCCCTACTCGCCCTTAACAGAGAATTCCAATGATAATTTCCAATAAGATACCCACCCCCATAACAAACTTCCTATACATCCCTCCACACTGATCGTTTCTAGCCTTGGCCCTTTCTAACTAACAAAATGCCATTGGGCTCACACACTACGTATTCCTCCCTCACATGGATCCCCTTTTCTTCACATGCTTTTGCACATACACTTTAGAAATTTGCGGTCTATTTTTAACCCTTCCTCCCTTCTTTCAAAGAAAAATATGCGAAGTGAATTATTTTCAGGATTAATTTTTGGAAACTTATGTTTCTGTTTACTCTCTCTTTGTCTATCTTTTAAACACATCCCAAATTAAAGTATATGATGAAACATATAGATACAATTGTATTTCTATTATTGCTTTAGAAATCCAAGATGTCATTTATTCATGAAAGTGTAGTGTGTGCATGCGCTGGAATAGTTTGAAAACAACTAGCCGTTCAAGTTGTCTTTTCCTTTTCCCCTTTCTTTTGTATTCAAGGAGAGGAGTTGACAGTTACTCGCTTCGATTTGTTATTCATTTTTTTTCAATTTATCGTTCCTTCTGTTAATTAGTATTATCGTTTTCATTGTAATAATATAAAGAACTTGTATATTTTTTTTCATAAATTTAAATGTCCCATTAATTATTCTTTTCTCTTAAAATTAGAAGTTCCATAAATAATTTCATTTGCTATAATTTTTTCGTCGGGGAAGTAAGTGTCGTACGTAAGGAACTTTGTTAAACTACCAAATATTAAGTCATATCTATAAGTTACTTGATAGCAGATGGAAATTTTAAGAGAAAAATATAATTTCCTTCCCATTTACAATTTTTATTTGGTTGAACCTTATTGTATTTTGTGTATAAGCAATAATCTTACCACAGCATTGCTTTTGGGTTGTTTCCGGCCTATGTTTTACCTGAAAAGAGATTTCTTTATGCTTTTGTATGTTATAACTGGTAACTGTATATCTAGTTCTAATGAATTGTATGATCTTGCTATGCAGAGTCTTTCTCAATTTAATCTTCCTCTGTCGCTTCCAAATGCACAATTAATGGGGAAAACTACTGGATCTCTGCCAACAGTTAGCACATCTTCCACGACAGTAATGTGTGGCAAAGGGTTACTTGGAAAAAATACCAAGCCTGGTGTAGGAGATGATTCATTGGCCTTCCATGGTGTATATTCAGGTTCTGGTAATGCAGCTGAAGCTGACTTGTACGATCCTGATCAACCTCTATGGAACAATAACTGTCCTGAGAAACAAAATGCACTCTCGGGTATGCATTCATCAAAGATTGATGAAGTTGAAACCTTGGTAGGAGATGATCCTTCTGATAGGAATCAGGTTAGGAAATGTGATGCTGCTGATAATGGATGCACTAGTAGAATTACTGTAACTAGTGGTCAACAGGTTACTAGTTCGTTTGCCGGGGGTAGAGGTGGGTCTAGAAATAGACATGATATGAAAGGTAAACTTGATCCAGTTGTAAGTTCCTCTGGCTATCACGAGAATGAAGTGAAGGAACACAATGAAGTTTTGACTAGTGTCCAAGGAAATTCTCATCAAGAAAAACACACGGCTCAGGATGATGCTCGCACGAAAGCTGGAGATTCATCTCTCAAGGCACATAGTGATGCCATGCGTACTTTGCGGAAACCTTCTCAGAAAGCAATGCGTACTTTGTTTGTCAATGGGATTCCACAACAGAGTAACAATACAGAGGCACTTCTTTCTCATTTTAAAAAATATGGCGAGGTCATTGACATCTATATTCCAGCAAATAGCCAACGAGCTTTTGTCCAGTTCTCAAAAAGGGAGGAGGCAGAAGCTGCTCTAAAGTCACCTGATGCTGTTATGGGCAATCGTTTTATCAAACTTTGGTGGGCTAATCGTGACAGCATTCCTGATGATGGTGTAAGCAGTAATAATGGTATTCATGTACTTCCACATCATATTGCAGCTGCTTCACTTCCTTCTATTGCTGTCAAAGGAAAGAACTGTGTCCAGGTTTCTACTTCAAAAGGCGGCATTTCCCATCCATTGGAATCTTCTTTAGCTGCCCCAGATCACTCTCATGCTTTCAATAGCCCGAAGAAACCTCCTTTGCAAAAGAAATTAGAGAATCTGGAACAGTTAAAGGAGCAACTCCGGAAGAAGCAAGAAATGCTAGACATGAAGCGGAATGATTTCAGACGCCAGTTGGATAAACTTGAAAAACAGGTATCATTTATAAATTTCTGTTACCTTACATGTTTGATCAAAGAACTGTTTTAAATAAGACATCACCTCTACTGTTGGAGGAATACGGGAGAAAATAAATAGAGGTTGAGAAAGAAAATCCATGCCAGGAAGATTGCATTTGGAGGTTCATATCACGTCATCTCATTTAATTACCCCTCAACTCTTGGCTTTAATTTCCATGTATTTTCTCATTTAATTATCCCTAAACCCTCTTGTGGAAGTGCAATTCTAGGCTCGTGTTACATACTGCAAACCAATCTACCGTTTGTCTTATTTTCTCATTTTGTTCTCAATACAGACCTCAGGAAGCAAAGCCGATGCAATCACTGGGTTTTCTGCAAAGCGGCTTAAAGTGGGAGTAGAAGCTGACACTAGTAAGCTTGTTTCTCCAAAAGCCAGCGAATCAAGTATTCCTTTGGCGTCACCACATACTGAGGTTAATGGGGAGAATGTTGAGCACTCCACATGTACTGTACAACAGGAATCCTCAAAGTTTGAGCCTGATCATCCATTGGCACCCGAAGCACCTTTTGACATTGGATTTAGAATTCTTCCTCCTTTACCAGCCGAATTTGCCAATGTATGTTTTACCATCCCTCTATATCAAGATCATTCATGGTAGTTTAATTACAAAATTTCTGGAATCTCTTAGATGATGATGATATCGATTCATTAGATTATATTTTCTTTGGAATGTTGTTACATAGCTTGACCATGTGAGGTAACTACTATTGTTTTTATATTTGTTCAGAGGATTACTATTAGTAAATTGCTATGCCCTTGAAGGATGTTCTGAAATATTAGACCACTAGTTGATGCAAAGGACTAAACAAAAAAGGAATGTGATTGATATTCAGTTGAGAACTATCCAAAGTGGTCTTGTTTAATTTTTATTTCCTTGCTGAATGATAGTGGCTCTTGGCAGGAAAAAAATCAGTCTTGTGTCTTACTTATCTGTTTTAATTCGTTAGTTGTACTTCAATAGCAAAATTATGTGAAGCTTGCGTGGGCTCTTTTAATTTTATGGTCTGAGGTTAACAAATTTCTCTTCAGTTCTTGAAGTAGTGTACTTGCTTCCACTTTAACACAGAATCTCTAGAGTTTTTAGAAGATAAGTATTTGGTTGGCAGGAAATAGGCGAAATCCCTCCCCTTTTCCCAGGATTCTTCAGAACCCTTAAAAACCTCCAATTATATATATCAACAAATACCAAAACAAGGCTTGCCACTAAATCTTCCCTCTGCCACTGAATGGTGGGTGCAAAAGTGTCTCCTCCAATTTGAATGAACCCTTATGTGAAACAAGCCAGCACCAAAAGAGGTTAACAACTTGCAAGTGTTGCCTTTTGGTTGGTCCAAGTTCCAGCCCATTCTTTTTTCTAGCTAGTTAAACCTATGATTTTCATTAACTTACTGCATCATACTAAGATCTGTGGGGGAAAAAAGGAAAAGAAACACATTTAACATTTGTATTGAAAAGGGAAGGATACCCAAAAATGGCATGGAGAGATGGAATCTGGGGTTTCTTTGTCATTTACAGTTACATGTATTGATACTTTTTTGACAAGGAAACATAATTGTTCATTGAAAAGAAAAGTTTTATGGAAGTTTTTGAATGGAAGTCTTAAAAACTTCCAAAAATAGAATAAACGTAGCTCAACCAGCTACCTCAAACCAGAAAATACAAAATCCACTCAACGCCCAACCAAAATTAGGGAGATAACATATATCACTCCAGAAATCGACACTCGAAACCTTGAATAGCTACCTGACCTACTACACAACCAAAAAACCGTAGAATTTGATCCTTTTTGGGGTATATATCCCGCGAAATAACTCTAGCCAAAGATTTCTCTTAGAGAAAAGTTGAGCCCATATTAGATAATAAGGATTTTGTGGAGAAGAGCCCTCTAGGATGAGGAATCCATCTCCAAGAATTCTTGGTTTGTGAGAGAGTGACCAAGGCAAGGTCAAGGTTAAGATTCGCCCACTAAAGTGCCTCTCCATCTTTCAAATTTCGCCCAAGTTTAAGGTCACAAAGCTGTTGTTGGTGTTCCAAACCTCTCTAACCGTGGCCTCTTAACAATGAGAAAGCCTATATAAGAGGGTATAACACTAGGCTAATGGGGGAATACCCAAGGATCCTTCCAAAAGAGGTTGTGGCACCACCACCGAATTGGTGATAAAATCTTGCTTTTTATTAATATTTTTTTCGAGGGTCTTGGGGCTAAGGTAGCCCAATTTAGATAGATAGAATCACCATACTTTTCCTTGATAGATTACTTAGGGGAGTTGAGAGGGGCCTTTCTAAGGTGTAGTTCCTAGTGAGGTTGAATGTGTAATGGTTCAATTTAAAAAAAAATAATAATATTCAATTCCACCGGAAATCTCGCGATTTCTGGCAAGGCATTTATTTTCGCAATTGAAACCGTCCCATAACCCCTTAAAATACTCTACCCTCTCACGCCCTTCATCATCAACTCAAAAGTCCTCCCATTCTGCAGTCTACCCTCATAACTGATTTCTTTGAAAGGGAAAGTTGGTTGTGGAGATCTAAAAATTACAAGAAAGAGTTTTGGGGGTTTAAGCACAAAGAAGTACCGTGAAGTTGTTGTATAAATTTCTTAAGGTTGAACTGTAGCGGAAACGGCGTCGGAATCGTTGGAGTTCCATTGGAAAAAGAAAGGCAATAGGCGAGGGTTCCAAACTTTTTTTGGGCGAAAAAGACAGATCGTCGCCAACACTCTCGGATCTTGGCACAACCCACGAATAAACCCTTCAGCTCATTTACCCAATGTGGCCCAAACAATTAGTCTGCGTTCACTTGGCCTAGCTCAACTAACAGTGCACTGACCTGACAACGACCCGTATATCCGTGCCTTCTTCAGCCACACGTTTTCGCCACGTGACCATTCCAGCCACGGCTCGGCTTCGTCATGTGTGACGGCTCAATTGGCTTGGCTCACGACTCCGTTGGCTCAGTTTCGTGGCTTGGCTTCTCAGCTTAGGCTACTCGGTATACAAATAATATATTGCTTTCCTATAGGTTTTCGACCCTCTTGAAGCCATTTTTTACCTTATTTAAGGCATTTGAGGTTAGTATGACTCCTATTTACCCAAGTTTAGTTAGTTTTAGGACTTACGTTAGAAATTATCGCCATGTTTAGTTAAGCTAGAATATTAATGTCCCGTATATGTCATCTGAATTTATATAGGTGAGACCTAAGCGTTCGAAGCATAGTTTAAAAGCAACTACCGGGTAATTAGTAACTAAAGCCAAGGCCAACCATATAAATGACCGGAGTTAGCTAATTGGTTGATGTATGATGGTGCATGCCCTGTGGCTTGTACATCAGCATTACATGACAACCATCATACATCAATCAATTAGCTAACTCCAACATTAAGGTCACTTGTTGGCCTTGGTTGAAGTTACTAATTACTTGGTAGTTGCTTCTAAACGATGCTTCCAGCATTCAATTCTCACCTATAACATTTCACGACATTAATATTTTAGCTTAACTAAACTTGGCAATTATTTCCAACCTAAGTCCTAAAACTAACTAAATTTGGGTAAATAGGAGTCTTACTGACCTCAAGTGCCTTAAATAAGGTCGAAAATGGCTTCAGGAGGGTCGGAAACCTAGGAAACAATATATTATTTGTATACCAAGCCGAGTCGGAGTGAGCCACGAAACCGAGCCGACGGAGCTGTGATCGAGCCGTCACACACGCTGATGCCGAGCCGCAGCTGGAATGGTCACGTGGCGTAAACGTGTGCAGCCGAAGAAGGCACGGGTTGAAGTCGGGTCGGGCGCAGGTATACGGATTTGTGCACCGTTGGTTGAGCTAGGCCAAGTGGACGCAGATTGATTATTTAGGCTGAGACGTGACTGGGCTGGGCTGTACGTATTGTGCCGCACTGGGTAAATGAGCCAAAGGGTTTATTCGTGGGTTGTGCCCAGATCCGAGAGTGTTGGCAACGATCCATCTTCTTCGCCGAAAACACAGACTTTAACCCTCGCCTCTTCCCTTTCTTTTTCCGTTGTTTCCACTACGGTTCGACCTTCGGAAATTTATACAACTCCACGGTACTACTTTGTTCTTAAACCCAAAAACTCTTTCTTGTAATTTTCAGATCTCCACCACCAACTTTCCCCTCAAATCTTTCGATTTCTCTCTCTACTGCAGAATGGGAGGACTTTTGAGTTGAGGATGAAGGGCATGAGAGGGTAGAGTCTTTTAAGGGGTTATGGGACGGTTTCAATTGCGAAAATAAATGCCTAGCCGGAAATCTTACGATTTCCAGTGGAATTGAATATATATATATATATATATTTTAAATCAAACTGTTACAAGTTAACATCTTAGATAGGGTGGTGCCTTGGCATGGCGTTCTTTGCAGGAGAAAGGTTGGGGATCACGTTCCTGTTTTCTGGAGTTGGGATGTGGCTTCTATTGTTTGGAACTGGTTCTTTACAAACTTTGGTCTTGCTCTAACTAGGCCAAGGGATTGTAGGGAGATGATCGTGGAGTTCCTTCATTCTTCATGCTCCTTATCATAAGAAAGGAAAGTTTTGCTATCTTGTGGGGACTTTGAGGAGGCTTTGGAGATCTCTATATGACAATTAGTTCTATGCTATATTCTATATTTTTCTTTGGGCTTCTGTGTCGAAGCCATTTTGTAATTATCCCTCAGGACTTTTTCTTGATTGGAGGCCCTTGTAGTTGGCTTCCTTTTTTTTTTTTTACTCGATGAAAGTTCGGTTACTTATTGTAGAAAACATGGAAGGTGTCGATTTCTTAAGAAGTCGGTCTCCCTGTGGTCAATGATTTCCAAAAGCATAAACACAACCGAGAGACTGCAATGACATTTTCCTTTCTGGTTTCTGTCCCCTTCTCTCTGTTGCTTGTGTTCAAACGCTGATCTTTCATTTTGAAAGAATTTGGGCTTTCCATTTGTTGTTGGAAGCTTTGATGGGAACATAATGTCAATTAAGAATTTTTCCCTTGGAGGTGTGCAGGCTTTGTGTTATTGGTTGAATTCTTTTTAACTACCATCTTCTTTGTGTTATTGTCTGAACTTTTGCCTTTGGAGCATCTTTACCTGATTCTAATTTCATGTTATTAATTGTTGTAGGAGAATGTGATAAAGGAGCATTTCTCAGCCTTCGGTGACGTTCGTACCGTCGAACTTGTTTCGGAAAATAGCAGCAGCATTTCAAATGCATCCAGTATCTACTCGGCTAATGTCACCTTTTTAACCCGTCATTCAGCTGAAATGGCATTTGAAAATGGCAAATGTAGGCAAGGTCAAGACTTGAAATTTGTATGGCTATCTAGTGGCAAAGACCCTGATGACAAGTCTTCCGAGGCATCTCGAGATGTCAACATGGACCCTAAAAACGAATCAGAAATCATCCTCTTTATAGAAACCTCAAGAGACGGAGAATTCGAGAATTCAACACGAGACAGTTGTGTCGAGCCTTCGGAAACAGGTAAAGTTTCCCCAGTGATTGAAAGAGACATGAATTGAAGCATTTTTATGGTTTAGGAGGCGTTTTTTTTCTTTCTTTTCGAGCATTTTTCATACCGAGTTAAAATGTAAAATTAATGGAGTTTTTCTTCTCTTCTGTTCTTTTTTTATTTAGTTCAGGAAAACCTGTTTAGCAAATGTGAAAATTTGTTTTCCATTTTCAACCCCCTCTTACTACATTCATGTATAAAGAAAAGGAGTCTCTAATTCTCCAGACTAATTGATTGATACAGTTATTGAATCAAATATTATTTTTTAGGTTCGTTATTATCAGGATTCAAAAATAAATTTAATGTACTTTTGTAACTTCAAATCTAAGATCTTCCATCCAAAATTTGAGCTGTTCGGCAATATGTTCAACAAAATTTGGTGATCAAATTTCAAAATCAGCCTCTTTGCTGAGTGATGATATTCATGTTTGCAAGCCTAAGCTGCTCCTCCAATGGCAAGAAGTCCTTCAAAGAAACGCAGGTATTATGCATCACATGTAACAGAGAAATAGCTGTATCAGTTTCGCTTTCATCAATAGGTTGGGAGCTATGTATACTGTTCGCATTTAGAATCCGTTCGGTCGAGGCGAGGAGATGGGAAGCGATGGGCTCTGCAATGTAACCCCAGCCAGATGTGGATATAAGAGAATTGAGGGTCACAGGTAGATCCTTCAGCACGGCATGAGGCTCCAAAATCAGTAGAGGCATGTATTTGGAGAAGCTACCTGATAGTAAACCAAGAAAATGCAGTGCCTGCAGAAGAAAGCACCAAAACGTTTTACAAAGTGTTCTCTAATTTTGTGAGGCAGGTAGTTTGAACCCCGACCCCGACCTTTTGATAGAAGATATATACCTTAACTAGTTGCACTATTTTCAAGTGGACAGAATGTTCTAACATATGCATTATAAATTTGATTCTTTCCATTTTCAGCGTAGAATGACAAC

mRNA sequence

TATGGTACAATCGTCGTCTCCTCTCTCTCTCTCTCTATCTTTCTCTCGGTCTAGAATCCTGGTTGCTGTTAACAACTCCGAAGGGGCCTCATACGAGCTCAGGGTTGCAGAGAAACCCTCGTGCTCTCTCTCTCTCTCTCTCGCCGGACCGCCGTTGAATCGCTAAACGACGGCGGTGTTTTCGTTAAACGATCTTGTCTCTTCCGTCGCTTCTGTTCCTCTTCTAATGCCCTTCGTTTTCTCTTCTTGCTTTGCTCGCCGCTAATTCCAGAGCCGAGTATCCTCGCTCTGACTAATTCAAGCATTCCATGGCGCTTTCTTGATCAATTCGTCCGAGAATACTCGGTTAAAATAACTCAATATAGTGTTTCAAGTTCTGGATACAAGACCGTAGCTACTTCTAAGGAATAAGGGATTGTTCTGTTTATTGCTGGGAGTCAAATGGAACTGAAAGTTTCATATCCTAAGCCAGACATTTCTTCCTCTGAGTATGTTAGTGACCCGGAGGAAAAGGATATTAGTGATGATGAAGATGATGATCGCAACCATAAGCATAGGAGGCGGGAGACACACTCTCAGTCTTTGGAAACAGATACACGTGAACATGATTTGAGGCCATATGGAAAGCGCAGTAAACCTTTTGAAAATGGACGTAGTTTTAGGGACAACGATTCTCAAGCGAATGAAGCTTGGAAATCCTTCAATTCTTCCACTCTTGAGAAAGACATCCCTGGGAAGTTTGATAAAAGACGCCTAGGTGGAGTGCCAGGTTCTCGAGTGGCTGGGGATTTCAATCAAAGGATCAGGGCAAACCAGGCGTTTTCTAGTGACCTAAGTTTTGGTAGGGGAAGAGGCAGGGAGTCTGCTCCTTGGAACCAGTTTGATTCAAGGTTTAGTCCTGTTGATATTGCTTCCCAAATTGTTCACCATGGGCCTTTTCCTCCGAGGCTATTTGCTGGAAGGGGTTTACCAAGTGTTTCTACTTCACAAACTGCACCATGGAATACATTTGGATTAATACCAGGAATTCCGAATGGTGGGCTAGAACCGATGCACTCTATTGGTTTTCAGGGAACACTTAGGCCTCCGATCAACCCTTCTCTGAACATTGGCATGCCTCGTCAGAGATGTAGAGATTTTGAGGAACGTGGATTCTGTCTTAGAGGAGACATGTGTCCAATGGAGCATGGAACTAATCGCATTGTAGTTGAGGATGTCCAGAGTCTTTCTCAATTTAATCTTCCTCTGTCGCTTCCAAATGCACAATTAATGGGGAAAACTACTGGATCTCTGCCAACAGTTAGCACATCTTCCACGACAGTAATGTGTGGCAAAGGGTTACTTGGAAAAAATACCAAGCCTGGTGTAGGAGATGATTCATTGGCCTTCCATGGTGTATATTCAGGTTCTGGTAATGCAGCTGAAGCTGACTTGTACGATCCTGATCAACCTCTATGGAACAATAACTGTCCTGAGAAACAAAATGCACTCTCGGGTATGCATTCATCAAAGATTGATGAAGTTGAAACCTTGGTAGGAGATGATCCTTCTGATAGGAATCAGGTTAGGAAATGTGATGCTGCTGATAATGGATGCACTAGTAGAATTACTGTAACTAGTGGTCAACAGGTTACTAGTTCGTTTGCCGGGGGTAGAGGTGGGTCTAGAAATAGACATGATATGAAAGGTAAACTTGATCCAGTTGTAAGTTCCTCTGGCTATCACGAGAATGAAGTGAAGGAACACAATGAAGTTTTGACTAGTGTCCAAGGAAATTCTCATCAAGAAAAACACACGGCTCAGGATGATGCTCGCACGAAAGCTGGAGATTCATCTCTCAAGGCACATAGTGATGCCATGCGTACTTTGCGGAAACCTTCTCAGAAAGCAATGCGTACTTTGTTTGTCAATGGGATTCCACAACAGAGTAACAATACAGAGGCACTTCTTTCTCATTTTAAAAAATATGGCGAGGTCATTGACATCTATATTCCAGCAAATAGCCAACGAGCTTTTGTCCAGTTCTCAAAAAGGGAGGAGGCAGAAGCTGCTCTAAAGTCACCTGATGCTGTTATGGGCAATCGTTTTATCAAACTTTGGTGGGCTAATCGTGACAGCATTCCTGATGATGGTGTAAGCAGTAATAATGGTATTCATGTACTTCCACATCATATTGCAGCTGCTTCACTTCCTTCTATTGCTGTCAAAGGAAAGAACTGTGTCCAGGTTTCTACTTCAAAAGGCGGCATTTCCCATCCATTGGAATCTTCTTTAGCTGCCCCAGATCACTCTCATGCTTTCAATAGCCCGAAGAAACCTCCTTTGCAAAAGAAATTAGAGAATCTGGAACAGTTAAAGGAGCAACTCCGGAAGAAGCAAGAAATGCTAGACATGAAGCGGAATGATTTCAGACGCCAGTTGGATAAACTTGAAAAACAGACCTCAGGAAGCAAAGCCGATGCAATCACTGGGTTTTCTGCAAAGCGGCTTAAAGTGGGAGTAGAAGCTGACACTAGTAAGCTTGTTTCTCCAAAAGCCAGCGAATCAAGTATTCCTTTGGCGTCACCACATACTGAGGTTAATGGGGAGAATGTTGAGCACTCCACATGTACTGTACAACAGGAATCCTCAAAGTTTGAGCCTGATCATCCATTGGCACCCGAAGCACCTTTTGACATTGGATTTAGAATTCTTCCTCCTTTACCAGCCGAATTTGCCAATGAGAATGTGATAAAGGAGCATTTCTCAGCCTTCGGTGACGTTCGTACCGTCGAACTTGTTTCGGAAAATAGCAGCAGCATTTCAAATGCATCCAGTATCTACTCGGCTAATGTCACCTTTTTAACCCGTCATTCAGCTGAAATGGCATTTGAAAATGGCAAATGTAGGCAAGGTCAAGACTTGAAATTTGTATGGCTATCTAGTGGCAAAGACCCTGATGACAAGTCTTCCGAGGCATCTCGAGATGTCAACATGGACCCTAAAAACGAATCAGAAATCATCCTCTTTATAGAAACCTCAAGAGACGGAGAATTCGAGAATTCAACACGAGACAGTTGTGTCGAGCCTTCGGAAACAGGTAAAGTTTCCCCAGTGATTGAAAGAGACATGAATTGAAGCATTTTTATGGTTTAGGAGGCGTTTTTTTTCTTTCTTTTCGAGCATTTTTCATACCGAGTTAAAATGTAAAATTAATGGAGTTTTTCTTCTCTTCTGTTCTTTTTTTATTTAGTTCAGGAAAACCTGTTTAGCAAATGTGAAAATTTGTTTTCCATTTTCAACCCCCTCTTACTACATTCATGTATAAAGAAAAGGAGTCTCTAATTCTCCAGACTAATTGATTGATACAGTTATTGAATCAAATATTATTTTTTAGGTTCGTTATTATCAGGATTCAAAAATAAATTTAATGTACTTTTGTAACTTCAAATCTAAGATCTTCCATCCAAAATTTGAGCTGTTCGGCAATATGTTCAACAAAATTTGGTGATCAAATTTCAAAATCAGCCTCTTTGCTGAGTGATGATATTCATGTTTGCAAGCCTAAGCTGCTCCTCCAATGGCAAGAAGTCCTTCAAAGAAACGCAGGTATTATGCATCACATGTAACAGAGAAATAGCTGTATCAGTTTCGCTTTCATCAATAGGTTGGGAGCTATGTATACTGTTCGCATTTAGAATCCGTTCGGTCGAGGCGAGGAGATGGGAAGCGATGGGCTCTGCAATGTAACCCCAGCCAGATGTGGATATAAGAGAATTGAGGGTCACAGGTAGATCCTTCAGCACGGCATGAGGCTCCAAAATCAGTAGAGGCATGTATTTGGAGAAGCTACCTGATAGTAAACCAAGAAAATGCAGTGCCTGCAGAAGAAAGCACCAAAACGTTTTACAAAGTGTTCTCTAATTTTGTGAGGCAGGTAGTTTGAACCCCGACCCCGACCTTTTGATAGAAGATATATACCTTAACTAGTTGCACTATTTTCAAGTGGACAGAATGTTCTAACATATGCATTATAAATTTGATTCTTTCCATTTTCAGCGTAGAATGACAAC

Coding sequence (CDS)

ATGGAACTGAAAGTTTCATATCCTAAGCCAGACATTTCTTCCTCTGAGTATGTTAGTGACCCGGAGGAAAAGGATATTAGTGATGATGAAGATGATGATCGCAACCATAAGCATAGGAGGCGGGAGACACACTCTCAGTCTTTGGAAACAGATACACGTGAACATGATTTGAGGCCATATGGAAAGCGCAGTAAACCTTTTGAAAATGGACGTAGTTTTAGGGACAACGATTCTCAAGCGAATGAAGCTTGGAAATCCTTCAATTCTTCCACTCTTGAGAAAGACATCCCTGGGAAGTTTGATAAAAGACGCCTAGGTGGAGTGCCAGGTTCTCGAGTGGCTGGGGATTTCAATCAAAGGATCAGGGCAAACCAGGCGTTTTCTAGTGACCTAAGTTTTGGTAGGGGAAGAGGCAGGGAGTCTGCTCCTTGGAACCAGTTTGATTCAAGGTTTAGTCCTGTTGATATTGCTTCCCAAATTGTTCACCATGGGCCTTTTCCTCCGAGGCTATTTGCTGGAAGGGGTTTACCAAGTGTTTCTACTTCACAAACTGCACCATGGAATACATTTGGATTAATACCAGGAATTCCGAATGGTGGGCTAGAACCGATGCACTCTATTGGTTTTCAGGGAACACTTAGGCCTCCGATCAACCCTTCTCTGAACATTGGCATGCCTCGTCAGAGATGTAGAGATTTTGAGGAACGTGGATTCTGTCTTAGAGGAGACATGTGTCCAATGGAGCATGGAACTAATCGCATTGTAGTTGAGGATGTCCAGAGTCTTTCTCAATTTAATCTTCCTCTGTCGCTTCCAAATGCACAATTAATGGGGAAAACTACTGGATCTCTGCCAACAGTTAGCACATCTTCCACGACAGTAATGTGTGGCAAAGGGTTACTTGGAAAAAATACCAAGCCTGGTGTAGGAGATGATTCATTGGCCTTCCATGGTGTATATTCAGGTTCTGGTAATGCAGCTGAAGCTGACTTGTACGATCCTGATCAACCTCTATGGAACAATAACTGTCCTGAGAAACAAAATGCACTCTCGGGTATGCATTCATCAAAGATTGATGAAGTTGAAACCTTGGTAGGAGATGATCCTTCTGATAGGAATCAGGTTAGGAAATGTGATGCTGCTGATAATGGATGCACTAGTAGAATTACTGTAACTAGTGGTCAACAGGTTACTAGTTCGTTTGCCGGGGGTAGAGGTGGGTCTAGAAATAGACATGATATGAAAGGTAAACTTGATCCAGTTGTAAGTTCCTCTGGCTATCACGAGAATGAAGTGAAGGAACACAATGAAGTTTTGACTAGTGTCCAAGGAAATTCTCATCAAGAAAAACACACGGCTCAGGATGATGCTCGCACGAAAGCTGGAGATTCATCTCTCAAGGCACATAGTGATGCCATGCGTACTTTGCGGAAACCTTCTCAGAAAGCAATGCGTACTTTGTTTGTCAATGGGATTCCACAACAGAGTAACAATACAGAGGCACTTCTTTCTCATTTTAAAAAATATGGCGAGGTCATTGACATCTATATTCCAGCAAATAGCCAACGAGCTTTTGTCCAGTTCTCAAAAAGGGAGGAGGCAGAAGCTGCTCTAAAGTCACCTGATGCTGTTATGGGCAATCGTTTTATCAAACTTTGGTGGGCTAATCGTGACAGCATTCCTGATGATGGTGTAAGCAGTAATAATGGTATTCATGTACTTCCACATCATATTGCAGCTGCTTCACTTCCTTCTATTGCTGTCAAAGGAAAGAACTGTGTCCAGGTTTCTACTTCAAAAGGCGGCATTTCCCATCCATTGGAATCTTCTTTAGCTGCCCCAGATCACTCTCATGCTTTCAATAGCCCGAAGAAACCTCCTTTGCAAAAGAAATTAGAGAATCTGGAACAGTTAAAGGAGCAACTCCGGAAGAAGCAAGAAATGCTAGACATGAAGCGGAATGATTTCAGACGCCAGTTGGATAAACTTGAAAAACAGACCTCAGGAAGCAAAGCCGATGCAATCACTGGGTTTTCTGCAAAGCGGCTTAAAGTGGGAGTAGAAGCTGACACTAGTAAGCTTGTTTCTCCAAAAGCCAGCGAATCAAGTATTCCTTTGGCGTCACCACATACTGAGGTTAATGGGGAGAATGTTGAGCACTCCACATGTACTGTACAACAGGAATCCTCAAAGTTTGAGCCTGATCATCCATTGGCACCCGAAGCACCTTTTGACATTGGATTTAGAATTCTTCCTCCTTTACCAGCCGAATTTGCCAATGAGAATGTGATAAAGGAGCATTTCTCAGCCTTCGGTGACGTTCGTACCGTCGAACTTGTTTCGGAAAATAGCAGCAGCATTTCAAATGCATCCAGTATCTACTCGGCTAATGTCACCTTTTTAACCCGTCATTCAGCTGAAATGGCATTTGAAAATGGCAAATGTAGGCAAGGTCAAGACTTGAAATTTGTATGGCTATCTAGTGGCAAAGACCCTGATGACAAGTCTTCCGAGGCATCTCGAGATGTCAACATGGACCCTAAAAACGAATCAGAAATCATCCTCTTTATAGAAACCTCAAGAGACGGAGAATTCGAGAATTCAACACGAGACAGTTGTGTCGAGCCTTCGGAAACAGGTAAAGTTTCCCCAGTGATTGAAAGAGACATGAATTGA

Protein sequence

MELKVSYPKPDISSSEYVSDPEEKDISDDEDDDRNHKHRRRETHSQSLETDTREHDLRPYGKRSKPFENGRSFRDNDSQANEAWKSFNSSTLEKDIPGKFDKRRLGGVPGSRVAGDFNQRIRANQAFSSDLSFGRGRGRESAPWNQFDSRFSPVDIASQIVHHGPFPPRLFAGRGLPSVSTSQTAPWNTFGLIPGIPNGGLEPMHSIGFQGTLRPPINPSLNIGMPRQRCRDFEERGFCLRGDMCPMEHGTNRIVVEDVQSLSQFNLPLSLPNAQLMGKTTGSLPTVSTSSTTVMCGKGLLGKNTKPGVGDDSLAFHGVYSGSGNAAEADLYDPDQPLWNNNCPEKQNALSGMHSSKIDEVETLVGDDPSDRNQVRKCDAADNGCTSRITVTSGQQVTSSFAGGRGGSRNRHDMKGKLDPVVSSSGYHENEVKEHNEVLTSVQGNSHQEKHTAQDDARTKAGDSSLKAHSDAMRTLRKPSQKAMRTLFVNGIPQQSNNTEALLSHFKKYGEVIDIYIPANSQRAFVQFSKREEAEAALKSPDAVMGNRFIKLWWANRDSIPDDGVSSNNGIHVLPHHIAAASLPSIAVKGKNCVQVSTSKGGISHPLESSLAAPDHSHAFNSPKKPPLQKKLENLEQLKEQLRKKQEMLDMKRNDFRRQLDKLEKQTSGSKADAITGFSAKRLKVGVEADTSKLVSPKASESSIPLASPHTEVNGENVEHSTCTVQQESSKFEPDHPLAPEAPFDIGFRILPPLPAEFANENVIKEHFSAFGDVRTVELVSENSSSISNASSIYSANVTFLTRHSAEMAFENGKCRQGQDLKFVWLSSGKDPDDKSSEASRDVNMDPKNESEIILFIETSRDGEFENSTRDSCVEPSETGKVSPVIERDMN
Homology
[Close]
BLAST of Cp4.1LG04g05420 vs. ExPASy Swiss-Prot
Match: Q9LVX1 (Zinc finger CCCH domain-containing protein 41 OS=Arabidopsis thaliana OX=3702 GN=At3g27700 PE=1 SV=1)

HSP 1 Score: 562.4 bits (1448), Expect = 9.3e-159
Identity = 391/935 (41.82%), Postives = 539/935 (57.65%), Query Frame = 0 

Query: 1   MELKVSYPKPDI-SSSEYVSDPEEK-DISDDEDDDRNHKHRRR-ETHSQSLETDTREHDL 60
           MEL VS PK  + S  + +SDPEE+ +IS++EDDDRNHKHRR+ ET SQSLE D+ +   
Sbjct: 1   MELSVSSPKQSVLSPPDCMSDPEEEHEISEEEDDDRNHKHRRKEETRSQSLEQDSSDQAF 60

Query: 61  -RPYGKRSKPFENGRSFRDNDSQANEAWKSFNSSTLEKDIPGKFDKRRLGGVPGSRVAGD 120
            RPY K  + +ENG SF ++                        +KR  G   G RV  D
Sbjct: 61  SRPYRKNYRHYENGNSFSEH------------------------EKRSFGTGSGQRVQFD 120

Query: 121 FNQRIRANQAFSSDLSFGRGRGRESAPWNQFDSRFSPVDIASQIVHHGPFPPRLFAGRGL 180
            NQR+R+N  FS D   GRGRG   + W Q DSRF+PVD++S +V  G     +F GRGL
Sbjct: 121 -NQRMRSNPMFSRDSGPGRGRGNYGS-WAQRDSRFNPVDLSSHMVQVGSMGQGMFGGRGL 180

Query: 181 PSVSTSQTAPWNTFGLIPGIPNGGLEPMHSIGFQGTLRPPINPSLNIGMPRQRCRDFEER 240
             VS +Q+APW  FG+IPG+PNGGL+  H +  QG+LRPP+N  LN+G+PRQRCRDFEER
Sbjct: 181 AGVSAAQSAPWPPFGMIPGVPNGGLDGFHHL--QGSLRPPLNAPLNMGIPRQRCRDFEER 240

Query: 241 GFCLRGDMCPMEHGTNRIVVEDVQSLSQFNLPLSLPNAQLMGKTTGSLPTVSTSSTTVMC 300
           GFCLRGDMCPMEHG NRIVV+DVQSLSQFNLP+S+P A  +  ++  +P       + M 
Sbjct: 241 GFCLRGDMCPMEHGMNRIVVDDVQSLSQFNLPVSVPGAPHLAASSKQVP-AQFGGASFMN 300

Query: 301 GKGLLGKNTKPGVGDDSLAFHGVYSGSGNAAEADLYDPDQPLWNNNCPEKQNALSGMHSS 360
            KG  G+  + G+  D L +   Y  +G     D YDPDQPLWNN+  E   A+S ++S 
Sbjct: 301 PKGAHGRTNEGGMAVDGLGYGDAYPSAGG---TDFYDPDQPLWNNSTGETSGAISTLNSH 360

Query: 361 KIDEVETLVGDDPSDRNQVRKCDAADNGCTSRITVTSGQQVTSSFAGGRGGSRNRHDMKG 420
            +DE    +     D NQ    DAA+NGC  R + ++ Q V     G   GS ++ + K 
Sbjct: 361 GVDENVAPL----DDSNQ----DAAENGCGIRDSRSTSQSVW----GRMKGSNSQANSKE 420

Query: 421 KLDPVVSSSGYHENEVKEHNEVLTSVQGNSH-QEKHTAQDDARTKAGDSSLKAHSDAMRT 480
           K D V++SS   E+++KE      SV  + H ++ H  +  A  K  DSS    +D M  
Sbjct: 421 KADAVLNSSAVPEDQLKE-----VSVNSSRHGKQNHVGESVA--KVVDSS-NISNDMMNN 480

Query: 481 LRKPSQKAMRTLFVNGIPQQSNNTEALLSHFKKYGEVIDIYIPANSQRAFVQFSKREEAE 540
            RKP+QKAMRTLFVN +P +SN  + +L+HF+K+G+VIDI+IP NS+RAFVQFSKREEAE
Sbjct: 481 TRKPTQKAMRTLFVNYVPHESNRRDLILAHFQKFGKVIDIHIPVNSERAFVQFSKREEAE 540

Query: 541 AALKSPDAVMGNRFIKLWWANRDSIPDDGVSSNNGIHVLPHHIAAASLPS---IAVKGKN 600
           +AL++PDAVMGNRFIKLWWANRDSIPD+G+S+ +G  +    + A+   +   IA   K+
Sbjct: 541 SALRAPDAVMGNRFIKLWWANRDSIPDNGLSTGSGASMKGRSMTASGAQNQFPIAAASKS 600

Query: 601 CVQVSTSKGGISHPLESSLAAPDHSH-------AFNSPKKPPL-QKKLENLEQLKEQLRK 660
               S +K     P   +  AP  S          + PK  PL QKK + LE+LKE LRK
Sbjct: 601 NHVSSIAK----VPTFQTGGAPSSSEQPKPVVVTTSGPKVTPLQQKKADTLERLKETLRK 660

Query: 661 KQEMLDMKRNDFRRQLDKLEKQTSGSKADAITGFSAKRLKVGVEADTSKLVSPKASESS- 720
           KQEML+ KRN++R++L  LEKQ +  K +      AKR+K+   +D+   ++   +ESS 
Sbjct: 661 KQEMLEQKRNEYRKKLATLEKQGTVVKREEADEPDAKRVKLDTASDSGAAIASPKTESST 720

Query: 721 ---IPLASPHTEVNGENVEHSTCTVQQESSKFEP---------DHPLAPEAPFD---IGF 780
              +P+  P +       + ST T   +S  F+          + P+      D      
Sbjct: 721 DKKVPILKPLS-----TAKLSTETPSPDSKNFKQRPYSFTTSLNAPMVNRYKLDNRTTTI 780

Query: 781 RILPPLPAEFANENVIKEHFSAFGDVRTVELVSENSSSISNASSIYSAN------VTFLT 840
           +++PPLP   A+  V+KEHFS++G+V  VEL  E+++SI +     + N      VTF+ 
Sbjct: 781 KVVPPLPTGLADVAVVKEHFSSYGEVSKVEL--EDNASIDSGKDHETQNESRAACVTFVK 840

Query: 841 RHSAEMAFENGKCRQGQDLKFVWL-------SSGKDPDDKSSEASRDVNMDPKNESEII- 880
           R +AE AF N KC Q   L+ VW+       S+  + +  S   SRD N+  KN+   + 
Sbjct: 841 RSAAEKAFANAKCWQEHTLQLVWVTRQSNRESNNNNNNSNSLSVSRD-NLSSKNKCASVS 871

[Close]
BLAST of Cp4.1LG04g05420 vs. ExPASy Swiss-Prot
Match: Q0JDM0 (Zinc finger CCCH domain-containing protein 27 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0394300 PE=2 SV=2)

HSP 1 Score: 475.3 bits (1222), Expect = 1.5e-132
Identity = 358/920 (38.91%), Postives = 493/920 (53.59%), Query Frame = 0 

Query: 4   KVSYPKP----DISSSEYVSDPEEKDISDDEDDDRNHKHRRRETHSQSLETDTREHDLRP 63
           K+  P P    + S+SE  +D E+ +ISDD+DDDRNHKHR+RE   QS + +T +    P
Sbjct: 14  KIEVPSPKDENNSSNSEAATDNEDFEISDDDDDDRNHKHRKREARPQSFDENTEQSPGGP 73

Query: 64  YGKRSKPFENGRSFRDNDSQANEAWKSFNSSTLEKDIPGKFDKRRLGGVPGSRVAGDFNQ 123
             KR K    G    D+  +A            +KD   KF KRR G    SR A   N 
Sbjct: 74  LKKRHK-ISGG---ADSHGEA------------QKDFFPKF-KRRPGAGAHSR-APRVNP 133

Query: 124 RIRANQA-FSSDLSFGRGRGRESAPWNQFDSRFSP---VDIASQIVHHG-PFPPRLFAGR 183
             R + A  ++     RGRGR  APW Q + RF+    +D ASQ+   G P  P LF G 
Sbjct: 134 SFRDSSASVAARAPMTRGRGRNGAPWAQHEPRFNTLEMIDFASQMASQGPPTHPSLFMGP 193

Query: 184 GLPSVSTSQTAPWNTFGLIPGIPNGGLEPMHSIGFQGTLRPPINPSLNIGMPRQRCRDFE 243
            LPS  ++Q   W  +G +PG+PNG L+P+H +G QG ++P I+P +++GMPRQRCRDFE
Sbjct: 194 ALPSGGSAQNGSWGPYGFMPGMPNGMLDPIHPLGMQGPIQPAISPLIDLGMPRQRCRDFE 253

Query: 244 ERGFCLRGDMCPMEHGTNRIVVEDVQSLSQFNLPLSLPNAQLMG--KTTGSLPTVSTSST 303
           ERGFCLRGDMCPMEHG NRIVVED+QSLSQFNLP+++PN Q +G     G+ P V+TSS 
Sbjct: 254 ERGFCLRGDMCPMEHGLNRIVVEDMQSLSQFNLPVTVPNTQGLGIQNEPGTAP-VNTSS- 313

Query: 304 TVMCGKGLLGKNTKPGVGDDSLAFHGVYSGSGNAAEADLYDPDQPLWNNNCPEKQNALSG 363
            +   KG+  K+ K  V +D L  +G  + +   ++AD+YDPDQPLWNN  P+     + 
Sbjct: 314 -LGGSKGVPAKDIKSAVTNDVLKLNGTTALA--VSDADVYDPDQPLWNNEHPDASAGFA- 373

Query: 364 MHSSKIDEVETLVGDDPSDR-NQVRKCDAADNGCTSRITVTSGQQVTSSFAGGRGGSRNR 423
            H+  +   E+L  +   ++ NQV   D++ N              + S   GR  S+  
Sbjct: 374 -HTDGVWNAESLGYEAAREQGNQVLAADSSQN--------------SKSSVWGRIASKKL 433

Query: 424 HDMKGKLDPVVSSSGYHENEVKEHNEVLTSVQGNSHQEKHTAQDDARTKAGDSSLKAHSD 483
              K       S++G   NE   ++E+  S         H     A+   G S+ +   D
Sbjct: 434 GHGKTANATSTSATGNKRNE--SYDEMAPST-------VHVNPASAKDSNGQSNSRIFGD 493

Query: 484 AMRTLRKPSQKAMRTLFVNGIPQQSNNTEALLSHFKKYGEVIDIYIPANSQRAFVQFSKR 543
             R   + S KA RTL+VNGIP +SN  EALLSHF+K+G+VIDIYIP+NS++AFVQFSKR
Sbjct: 494 VGRQSNRASHKASRTLYVNGIPLESNRWEALLSHFQKFGQVIDIYIPSNSEKAFVQFSKR 553

Query: 544 EEAEAALKSPDAVMGNRFIKLWWANRDSIPD--DGVSSNNGIHVLPHHIAAASLPSIAVK 603
           EEAEAALK+PDAVMGNRFIKLWWANRD IPD  +G       H+      +   PS + +
Sbjct: 554 EEAEAALKAPDAVMGNRFIKLWWANRDRIPDEVEGRIPAKSSHMSAALANSVPQPSSSNR 613

Query: 604 GKNCVQVSTSKGGISHPLESSLAAPDHSH-AFNSPKK-PPLQKKLENLEQLKEQLRKKQE 663
           GK  +Q +T +       E+S     H     NS K  PP  K+ E+LE L E+LRKKQE
Sbjct: 614 GKENLQSATPRASSGSSAEASGPGTGHKMLPANSVKSLPPDTKRQESLE-LLEELRKKQE 673

Query: 664 MLDMKRNDFRRQLDKLEKQ----TSGSKADA------------ITGFSAKRLKVGVEADT 723
           +L  KR++FRRQL+KL KQ     S  +A+A            +T   +K +  G E   
Sbjct: 674 ILAQKRDEFRRQLEKLAKQKGLANSAKQAEAGGKEVASNDVHRVT--DSKSMNTGTEGPR 733

Query: 724 SKLVSPKASESSIPLASPHTEVNGENVEHSTCTVQQESSKFEPDHPLAPEAPFDIGFRIL 783
                   + +S  LAS   + +  + +      +Q S    P             FRIL
Sbjct: 734 D-AAGTLQNRTSGELASSSHKSSATSAQKPAVATKQTSPLLVPSQNRFKLDNRTTSFRIL 793

Query: 784 PPLPAEFANENVIKEHFSAFGDVRTVEL---VSENSSSISNASSIYSANVTFLTRHSAEM 843
           PPLP E A+E+V+K+HF +FG++ +V L    + N  +    S   SA VT+ TR SAE 
Sbjct: 794 PPLPPEIADESVLKDHFMSFGELSSVVLEDTEAYNHDATLKPSLSCSACVTYTTRQSAEK 853

Query: 844 AFENGKCRQGQDLKFVWLSSGKDPDDKSSEASRDVNMDPKNESEIILFIETSRDGEFENS 888
           AF  GK  +G  L+F+WL++     + S      +                +R   F + 
Sbjct: 854 AFIGGKSCKGHTLRFMWLTASPGSTNHSRFQKTSI---------------PARASSFSSQ 866

[Close]
BLAST of Cp4.1LG04g05420 vs. ExPASy Swiss-Prot
Match: Q6NZN0 (RNA-binding protein 26 OS=Mus musculus OX=10090 GN=Rbm26 PE=1 SV=2)

HSP 1 Score: 67.4 bits (163), Expect = 9.4e-10
Identity = 132/564 (23.40%), Postives = 220/564 (39.01%), Query Frame = 0 

Query: 22  EEKDISDDE---DDDRNHKHRRRETH----SQSLETDTREHDLRPYGKRSKPFENGR--- 81
           +EKDI  +E   +++R  K  RR  H    S S   D R  D R    RS+  +  R   
Sbjct: 101 QEKDIKKEELTKEEEREKKFSRRLNHSPPQSSSRYRDNRSRDERKKDDRSRKRDYDRNPP 160

Query: 82  ---SFRDNDSQANEAWKSFNSSTLEKDIPGKFDKRRLGGVPGSRVAGDFNQRIRANQAFS 141
              S+RD  ++     +S++ S         + K RL      R       R R+ +   
Sbjct: 161 RRDSYRDRYNRRRGRSRSYSRSRSR-----SWSKERLRDRDRDRSRTRSRSRTRSRERDL 220

Query: 142 SDLSFGRGRGRESAPWNQFDSRFSPVDIASQIVHHGPFPPRLFAGRGLPSVSTSQTAPWN 201
               +   R       +  ++ ++PV   S I   G +P        +P++S++ T    
Sbjct: 221 VKPKYDLDR------TDPLENNYTPVSSVSNI-SSGHYP--------VPTLSSTITVIAP 280

Query: 202 TFGLIPGIPNGGLEPMHSIGFQGTLRPPINPSLNIGMPRQRCRDFEERGFCLRGDMCPME 261
           T        +        +     +RPP        MP++RCRD++E+GFC+RGDMCP +
Sbjct: 281 THHGNNTTESWSEFHEDQVDHNSYVRPP--------MPKKRCRDYDEKGFCMRGDMCPFD 340

Query: 262 HGTNRIVVEDVQSLSQFNLPLSLPNAQLMGKTTGSLPTVSTSSTTVMCGKGLLGKNTKPG 321
           HG++ +VVEDV      NLP  LP         G  P        ++    +   N +P 
Sbjct: 341 HGSDPVVVEDV------NLPGMLPFPAQPPVVEGPPPPGLPPPPPILTPPPV---NLRPP 400

Query: 322 VGDDSLAFHGVYSGSGNAAEADLYDPDQPLWNNNCPEKQNALSGMHSSKIDEVETLV--- 381
           V            G    +   +  P  PL     P + + +    +S    V T+V   
Sbjct: 401 VPP---------PGPLPPSLPPVTGPPPPL----PPLQPSGMDAPPNSATSSVPTVVTTG 460

Query: 382 ---GDDPSDRNQVRKCDAADNGCTSRITVTSGQQVTSSFAGGRGGSRNR-HDMKGKLDPV 441
                 P+  +         +   +         +T++    R   R+R H  +  L  +
Sbjct: 461 IHHQPPPAPPSLFTAVFVLPDTYDTDGYNPEAPSITNT---SRPMYRHRVHAQRPNLIGL 520

Query: 442 VSSSGYHENEVKEHNEVLTSVQGNSHQEKHTAQDDARTKAGDSSLKAHSDA---MRTLRK 501
            S         K  N+    +  +S   K T       + G S+ K   D     RT   
Sbjct: 521 TSGDMDLPPREKPPNKSSMRIVVDSESRKRTI---GSGEPGVSTKKTWFDKPNFNRTNSP 580

Query: 502 PSQKAMR------TLFVNGIPQQSNNTEALLSHFKKYGEVIDIYIPANS--QRAFVQFSK 555
             QK ++       L +  +P + NN   L  HF ++G ++++ +  N   + A +QF+ 
Sbjct: 581 GFQKKVQFGNENTKLELRKVPPELNNISKLNEHFSRFGTLVNLQVAYNGDPEGALIQFAT 608

[Close]
BLAST of Cp4.1LG04g05420 vs. ExPASy Swiss-Prot
Match: Q5T8P6 (RNA-binding protein 26 OS=Homo sapiens OX=9606 GN=RBM26 PE=1 SV=3)

HSP 1 Score: 66.2 bits (160), Expect = 2.1e-09
Identity = 130/565 (23.01%), Postives = 214/565 (37.88%), Query Frame = 0 

Query: 22  EEKDISDDE---DDDRNHKHRRRETH----SQSLETDTREHDLRPYGKRSKPFENGR--- 81
           +EKDI  +E   +++R  K  RR  H    S S   + R  D R    RS+  +  R   
Sbjct: 101 QEKDIKKEEITKEEEREKKFSRRLNHSPPQSSSRYRENRSRDERKKDDRSRKRDYDRNPP 160

Query: 82  ---SFRDNDSQANEAWKSFNSSTLEKDIPGKFDKRRLGGVPGSRVAGDFNQRIRANQAFS 141
              S+RD  ++     +S++ S         + K RL      R       R R+ +   
Sbjct: 161 RRDSYRDRYNRRRGRSRSYSRSRSR-----SWSKERLRERDRDRSRTRSRSRTRSRERDL 220

Query: 142 SDLSFGRGRGRESAPWNQFDSRFSPVDIASQIVHHGPFPPRLFAGRGLPSVSTSQTAPWN 201
               +   R       +  ++ ++PV     I   G +P        +P++S++ T    
Sbjct: 221 VKPKYDLDR------TDPLENNYTPVSSVPSI-SSGHYP--------VPTLSSTITVIAP 280

Query: 202 TFGLIPGIPNGGLEPMHSIGFQGTLRPPINPSLNIGMPRQRCRDFEERGFCLRGDMCPME 261
           T        +        +     +RPP        MP++RCRD++E+GFC+RGDMCP +
Sbjct: 281 THHGNNTTESWSEFHEDQVDHNSYVRPP--------MPKKRCRDYDEKGFCMRGDMCPFD 340

Query: 262 HGTNRIVVEDVQSLSQFNLPLSLPNAQLMGKTTGSLPTVSTSSTTVMCGKGLLGKNTKPG 321
           HG++ +VVEDV      NLP  LP         G  P        ++    +   N +P 
Sbjct: 341 HGSDPVVVEDV------NLPGMLPFPAQPPVVEGPPPPGLPPPPPILTPPPV---NLRPP 400

Query: 322 VGDDSLAFHGVYSGSGNAAEADLYDPDQPLWNNNCPEKQNALSGMHSSKIDEVETLV--- 381
           V            G    +   +  P  PL     P + + +    +S    V T+V   
Sbjct: 401 VPP---------PGPLPPSLPPVTGPPPPL----PPLQPSGMDAPPNSATSSVPTVVTTG 460

Query: 382 --GDDPSDRNQVRKCDAADNGCTSRITVTSGQQVTSSFAGGRGGSRNR-HDMKGKLDPVV 441
                P     +   D  D       T     +  S     R   R+R H  +  L  + 
Sbjct: 461 IHHQPPPAPPSLFTADTYD-------TDGYNPEAPSITNTSRPMYRHRVHAQRPNLIGLT 520

Query: 442 SSSGYHENEVKEHNEVLTSVQGNSHQEKHTAQDDARTKAGDSSLKAHSDAMRTLRKPSQK 501
           S         K  N+    +  +S   K T            +     +  RT     QK
Sbjct: 521 SGDMDLPPREKPPNKSSMRIVVDSESRKRTIGSGEPGVPTKKTWFDKPNFNRTNSPGFQK 580

Query: 502 AMR------TLFVNGIPQQSNNTEALLSHFKKYGEVIDIYIPANS--QRAFVQFSKREEA 560
            ++       L +  +P + NN   L  HF ++G ++++ +  N   + A +QF+  EEA
Sbjct: 581 KVQFGNENTKLELRKVPPELNNISKLNEHFSRFGTLVNLQVAYNGDPEGALIQFATYEEA 608

[Close]
BLAST of Cp4.1LG04g05420 vs. ExPASy Swiss-Prot
Match: Q2T9I5 (RNA-binding protein 26 OS=Xenopus laevis OX=8355 GN=rbm26 PE=2 SV=2)

HSP 1 Score: 57.0 bits (136), Expect = 1.3e-06
Identity = 137/621 (22.06%), Postives = 223/621 (35.91%), Query Frame = 0 

Query: 8   PKPDISSSEYVS----DPEEKDISDDEDDDRNHKHRR--RETHSQSLETDTREHDLRPYG 67
           P+PD +S+  V     + +EK+I  DE +    K ++  R  +     + TR  D R   
Sbjct: 79  PQPDSTSTAVVKLDSFEHQEKEIKKDEVNKEEEKEKKAPRRLNQSPQPSSTRHKDTRENR 138

Query: 68  KRSKPFENGRSFRDNDSQANEAWKSFNSSTLEKD-----IPGKFDKRRLGGVPGSRVAGD 127
           KRS          ++D ++N    SF S   E+       P + +  ++     +R   D
Sbjct: 139 KRS----------NSDRESNSIQNSFRSGLPEQKQDVDAAPPRLNSNKVQNAKNTRSRDD 198

Query: 128 FNQ-------------------RIRANQAFSSDLSFGRGRGRESAPWNQFDSRFSPVDIA 187
             +                   R R N+      S+ R R R  +   Q D   S     
Sbjct: 199 RKRDDRFRKREYDRNVPRRDSYRDRYNRRRGRSRSYSRSRSRSWSKERQRDRDRSRSRTR 258

Query: 188 SQIVHHG----------PFPPRLFAGRGLPSVSTSQTAPWNTFGLIPGIPNGGLEPMHSI 247
           S+    G          P      +G  +P + ++   P  T      +    + P H  
Sbjct: 259 SRDKDSGKPKFDLDRPDPVDNSYASGSSVPHIGSAH-FPVPTLSSTITV----ITPSHHG 318

Query: 248 GFQGTLRPPINPSL-------NIGMPRQRCRDFEERGFCLRGDMCPMEHGTNRIVVEDVQ 307
                  P  +           + M ++RCRD++E+GFC+RGDMCP +HG++ +VVEDV 
Sbjct: 319 NSSAENWPEFHEDQVDHSSYGRLQMQKKRCRDYDEKGFCMRGDMCPFDHGSDPVVVEDVN 378

Query: 308 SLSQFNLPLSLPNAQLMGKTTGSLPTVSTSSTTVMCG--------KGLLGKNTKPGVGDD 367
                 LP   P   L G     LP   +  T              G L  +  P  G  
Sbjct: 379 LPG--ILPFPAPPPVLEGPPPPGLPPPPSLLTPPPVNLQPPPVPPPGPLPPSLPPVTGPP 438

Query: 368 SLAFHGVYSGSGNAAEADLYDPDQPLWNNNCPEKQNALSGMHSSKIDEVET--LVGDDPS 427
                                P  PL     P   +A     +S +  V T  ++   P 
Sbjct: 439 --------------------PPLPPLQ----PAGMDAPPNSATSSVPTVVTTGILHPPPV 498

Query: 428 DRNQVRKCDAADNGCTSRITVT-----SGQQVTSSFAGGRGGSRNR-HDMKGKLDPVVSS 487
             + +    AA  G       T        +  S     R   R+R H  +  L   ++S
Sbjct: 499 PPSSLFPSAAAAAGPIPLFPETYEADGYNPEAPSMTTTSRPLYRHRVHAQRPNLIG-LTS 558

Query: 488 SGYHENEVKEHNEVLTSVQGNSHQEKHTAQD---DARTKAGDSSLKAHSDAMRTLRKPSQ 547
                   +E N +   V   S +    + D    ++    D S   +       +KP  
Sbjct: 559 GDMDLPTPREKNNMRIVVDSESRKRNLGSGDCVLPSKKPWFDKSNFNNRMNPGFQKKPLF 618

Query: 548 KAMRT-LFVNGIPQQSNNTEALLSHFKKYGEVIDIYI--PANSQRAFVQFSKREEAEAAL 560
               T L +  IP + NN   L  HF K+G ++++ +    + + A +QF+   EA+ A+
Sbjct: 619 PNENTKLELRRIPPELNNISKLNEHFSKFGTIVNLQVAYKGDPEGALIQFATHGEAKKAI 657

[Close]
BLAST of Cp4.1LG04g05420 vs. NCBI nr
Match: XP_023529340.1 (zinc finger CCCH domain-containing protein 41-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1754 bits (4542), Expect = 0.0
Identity = 891/891 (100.00%), Postives = 891/891 (100.00%), Query Frame = 0 

Query: 1   MELKVSYPKPDISSSEYVSDPEEKDISDDEDDDRNHKHRRRETHSQSLETDTREHDLRPY 60
           MELKVSYPKPDISSSEYVSDPEEKDISDDEDDDRNHKHRRRETHSQSLETDTREHDLRPY
Sbjct: 1   MELKVSYPKPDISSSEYVSDPEEKDISDDEDDDRNHKHRRRETHSQSLETDTREHDLRPY 60

Query: 61  GKRSKPFENGRSFRDNDSQANEAWKSFNSSTLEKDIPGKFDKRRLGGVPGSRVAGDFNQR 120
           GKRSKPFENGRSFRDNDSQANEAWKSFNSSTLEKDIPGKFDKRRLGGVPGSRVAGDFNQR
Sbjct: 61  GKRSKPFENGRSFRDNDSQANEAWKSFNSSTLEKDIPGKFDKRRLGGVPGSRVAGDFNQR 120

Query: 121 IRANQAFSSDLSFGRGRGRESAPWNQFDSRFSPVDIASQIVHHGPFPPRLFAGRGLPSVS 180
           IRANQAFSSDLSFGRGRGRESAPWNQFDSRFSPVDIASQIVHHGPFPPRLFAGRGLPSVS
Sbjct: 121 IRANQAFSSDLSFGRGRGRESAPWNQFDSRFSPVDIASQIVHHGPFPPRLFAGRGLPSVS 180

Query: 181 TSQTAPWNTFGLIPGIPNGGLEPMHSIGFQGTLRPPINPSLNIGMPRQRCRDFEERGFCL 240
           TSQTAPWNTFGLIPGIPNGGLEPMHSIGFQGTLRPPINPSLNIGMPRQRCRDFEERGFCL
Sbjct: 181 TSQTAPWNTFGLIPGIPNGGLEPMHSIGFQGTLRPPINPSLNIGMPRQRCRDFEERGFCL 240

Query: 241 RGDMCPMEHGTNRIVVEDVQSLSQFNLPLSLPNAQLMGKTTGSLPTVSTSSTTVMCGKGL 300
           RGDMCPMEHGTNRIVVEDVQSLSQFNLPLSLPNAQLMGKTTGSLPTVSTSSTTVMCGKGL
Sbjct: 241 RGDMCPMEHGTNRIVVEDVQSLSQFNLPLSLPNAQLMGKTTGSLPTVSTSSTTVMCGKGL 300

Query: 301 LGKNTKPGVGDDSLAFHGVYSGSGNAAEADLYDPDQPLWNNNCPEKQNALSGMHSSKIDE 360
           LGKNTKPGVGDDSLAFHGVYSGSGNAAEADLYDPDQPLWNNNCPEKQNALSGMHSSKIDE
Sbjct: 301 LGKNTKPGVGDDSLAFHGVYSGSGNAAEADLYDPDQPLWNNNCPEKQNALSGMHSSKIDE 360

Query: 361 VETLVGDDPSDRNQVRKCDAADNGCTSRITVTSGQQVTSSFAGGRGGSRNRHDMKGKLDP 420
           VETLVGDDPSDRNQVRKCDAADNGCTSRITVTSGQQVTSSFAGGRGGSRNRHDMKGKLDP
Sbjct: 361 VETLVGDDPSDRNQVRKCDAADNGCTSRITVTSGQQVTSSFAGGRGGSRNRHDMKGKLDP 420

Query: 421 VVSSSGYHENEVKEHNEVLTSVQGNSHQEKHTAQDDARTKAGDSSLKAHSDAMRTLRKPS 480
           VVSSSGYHENEVKEHNEVLTSVQGNSHQEKHTAQDDARTKAGDSSLKAHSDAMRTLRKPS
Sbjct: 421 VVSSSGYHENEVKEHNEVLTSVQGNSHQEKHTAQDDARTKAGDSSLKAHSDAMRTLRKPS 480

Query: 481 QKAMRTLFVNGIPQQSNNTEALLSHFKKYGEVIDIYIPANSQRAFVQFSKREEAEAALKS 540
           QKAMRTLFVNGIPQQSNNTEALLSHFKKYGEVIDIYIPANSQRAFVQFSKREEAEAALKS
Sbjct: 481 QKAMRTLFVNGIPQQSNNTEALLSHFKKYGEVIDIYIPANSQRAFVQFSKREEAEAALKS 540

Query: 541 PDAVMGNRFIKLWWANRDSIPDDGVSSNNGIHVLPHHIAAASLPSIAVKGKNCVQVSTSK 600
           PDAVMGNRFIKLWWANRDSIPDDGVSSNNGIHVLPHHIAAASLPSIAVKGKNCVQVSTSK
Sbjct: 541 PDAVMGNRFIKLWWANRDSIPDDGVSSNNGIHVLPHHIAAASLPSIAVKGKNCVQVSTSK 600

Query: 601 GGISHPLESSLAAPDHSHAFNSPKKPPLQKKLENLEQLKEQLRKKQEMLDMKRNDFRRQL 660
           GGISHPLESSLAAPDHSHAFNSPKKPPLQKKLENLEQLKEQLRKKQEMLDMKRNDFRRQL
Sbjct: 601 GGISHPLESSLAAPDHSHAFNSPKKPPLQKKLENLEQLKEQLRKKQEMLDMKRNDFRRQL 660

Query: 661 DKLEKQTSGSKADAITGFSAKRLKVGVEADTSKLVSPKASESSIPLASPHTEVNGENVEH 720
           DKLEKQTSGSKADAITGFSAKRLKVGVEADTSKLVSPKASESSIPLASPHTEVNGENVEH
Sbjct: 661 DKLEKQTSGSKADAITGFSAKRLKVGVEADTSKLVSPKASESSIPLASPHTEVNGENVEH 720

Query: 721 STCTVQQESSKFEPDHPLAPEAPFDIGFRILPPLPAEFANENVIKEHFSAFGDVRTVELV 780
           STCTVQQESSKFEPDHPLAPEAPFDIGFRILPPLPAEFANENVIKEHFSAFGDVRTVELV
Sbjct: 721 STCTVQQESSKFEPDHPLAPEAPFDIGFRILPPLPAEFANENVIKEHFSAFGDVRTVELV 780

Query: 781 SENSSSISNASSIYSANVTFLTRHSAEMAFENGKCRQGQDLKFVWLSSGKDPDDKSSEAS 840
           SENSSSISNASSIYSANVTFLTRHSAEMAFENGKCRQGQDLKFVWLSSGKDPDDKSSEAS
Sbjct: 781 SENSSSISNASSIYSANVTFLTRHSAEMAFENGKCRQGQDLKFVWLSSGKDPDDKSSEAS 840

Query: 841 RDVNMDPKNESEIILFIETSRDGEFENSTRDSCVEPSETGKVSPVIERDMN 891
           RDVNMDPKNESEIILFIETSRDGEFENSTRDSCVEPSETGKVSPVIERDMN
Sbjct: 841 RDVNMDPKNESEIILFIETSRDGEFENSTRDSCVEPSETGKVSPVIERDMN 891

[Close]
BLAST of Cp4.1LG04g05420 vs. NCBI nr
Match: XP_022928251.1 (zinc finger CCCH domain-containing protein 41-like [Cucurbita moschata] >KAG6588947.1 Zinc finger CCCH domain-containing protein 41, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1738 bits (4502), Expect = 0.0
Identity = 882/891 (98.99%), Postives = 887/891 (99.55%), Query Frame = 0 

Query: 1   MELKVSYPKPDISSSEYVSDPEEKDISDDEDDDRNHKHRRRETHSQSLETDTREHDLRPY 60
           MELK+SYPKPDISSSEYVSDPEEKDISDDEDDDRNHKHRRRETHSQSLETDTREHDLRPY
Sbjct: 1   MELKISYPKPDISSSEYVSDPEEKDISDDEDDDRNHKHRRRETHSQSLETDTREHDLRPY 60

Query: 61  GKRSKPFENGRSFRDNDSQANEAWKSFNSSTLEKDIPGKFDKRRLGGVPGSRVAGDFNQR 120
           GKRSKPFENGRSFRDNDSQANEAWKSFNSSTLEKDIPGKFDKRRLGGVPGSRVAGDFNQR
Sbjct: 61  GKRSKPFENGRSFRDNDSQANEAWKSFNSSTLEKDIPGKFDKRRLGGVPGSRVAGDFNQR 120

Query: 121 IRANQAFSSDLSFGRGRGRESAPWNQFDSRFSPVDIASQIVHHGPFPPRLFAGRGLPSVS 180
           IRANQAFSSDLSFGRGRGRESAPWNQFDSRFSPVDIASQIVHHGPFPPRLFAGRGLPSVS
Sbjct: 121 IRANQAFSSDLSFGRGRGRESAPWNQFDSRFSPVDIASQIVHHGPFPPRLFAGRGLPSVS 180

Query: 181 TSQTAPWNTFGLIPGIPNGGLEPMHSIGFQGTLRPPINPSLNIGMPRQRCRDFEERGFCL 240
           TSQTAPWNTFGLIPGIPNGGLEPMHSIGFQGTLRPPINPSLNIGMPRQRCRDFEERGFCL
Sbjct: 181 TSQTAPWNTFGLIPGIPNGGLEPMHSIGFQGTLRPPINPSLNIGMPRQRCRDFEERGFCL 240

Query: 241 RGDMCPMEHGTNRIVVEDVQSLSQFNLPLSLPNAQLMGKTTGSLPTVSTSSTTVMCGKGL 300
           RGDMCPMEHGTNRIVVEDVQSLSQFNLPLSLPNAQLMGK+TGSLPTVSTSSTTVMCGKGL
Sbjct: 241 RGDMCPMEHGTNRIVVEDVQSLSQFNLPLSLPNAQLMGKSTGSLPTVSTSSTTVMCGKGL 300

Query: 301 LGKNTKPGVGDDSLAFHGVYSGSGNAAEADLYDPDQPLWNNNCPEKQNALSGMHSSKIDE 360
           LGKNTKPGVGDDSLAFHGVYSGSGNAAEADLYDPDQPLWNNNCPEKQNALSGMHSSKIDE
Sbjct: 301 LGKNTKPGVGDDSLAFHGVYSGSGNAAEADLYDPDQPLWNNNCPEKQNALSGMHSSKIDE 360

Query: 361 VETLVGDDPSDRNQVRKCDAADNGCTSRITVTSGQQVTSSFAGGRGGSRNRHDMKGKLDP 420
           VETLVGDDPSDRNQVRKCDAADNGCTSRITVTSGQQVTS FAGGRGGSRNRHDMKGKLDP
Sbjct: 361 VETLVGDDPSDRNQVRKCDAADNGCTSRITVTSGQQVTSLFAGGRGGSRNRHDMKGKLDP 420

Query: 421 VVSSSGYHENEVKEHNEVLTSVQGNSHQEKHTAQDDARTKAGDSSLKAHSDAMRTLRKPS 480
           VVSSSGYHENEVKEHNEVLTSVQGNSHQEKH AQDDARTKAGDSSLKAHSDAMRTLRKPS
Sbjct: 421 VVSSSGYHENEVKEHNEVLTSVQGNSHQEKHMAQDDARTKAGDSSLKAHSDAMRTLRKPS 480

Query: 481 QKAMRTLFVNGIPQQSNNTEALLSHFKKYGEVIDIYIPANSQRAFVQFSKREEAEAALKS 540
           QKAMRTLFVNGIPQQSNNTEALLSHFKKYGEVIDIYIPANSQRAFVQFSKREEAEAALKS
Sbjct: 481 QKAMRTLFVNGIPQQSNNTEALLSHFKKYGEVIDIYIPANSQRAFVQFSKREEAEAALKS 540

Query: 541 PDAVMGNRFIKLWWANRDSIPDDGVSSNNGIHVLPHHIAAASLPSIAVKGKNCVQVSTSK 600
           PDAVMGNRFIKLWWANRDSIPDDGVSSNNGIHVLPHHIAAASLPSIAVKGKNCVQVSTSK
Sbjct: 541 PDAVMGNRFIKLWWANRDSIPDDGVSSNNGIHVLPHHIAAASLPSIAVKGKNCVQVSTSK 600

Query: 601 GGISHPLESSLAAPDHSHAFNSPKKPPLQKKLENLEQLKEQLRKKQEMLDMKRNDFRRQL 660
           GGISHPLESSLAAPDHSHAFNSPKKPPLQKKLENLEQLKEQLRKKQEMLDMKRNDFRRQL
Sbjct: 601 GGISHPLESSLAAPDHSHAFNSPKKPPLQKKLENLEQLKEQLRKKQEMLDMKRNDFRRQL 660

Query: 661 DKLEKQTSGSKADAITGFSAKRLKVGVEADTSKLVSPKASESSIPLASPHTEVNGENVEH 720
           DKLEKQTSGSKADAITGFSAKRLKVGVEADTSKLVSPKASESSIPLASPHTEVNGENVEH
Sbjct: 661 DKLEKQTSGSKADAITGFSAKRLKVGVEADTSKLVSPKASESSIPLASPHTEVNGENVEH 720

Query: 721 STCTVQQESSKFEPDHPLAPEAPFDIGFRILPPLPAEFANENVIKEHFSAFGDVRTVELV 780
           STCTVQQESSKFEPDHPLAPEAPFDIGFRILPPLPAEFANENVI EHFSAFGDVRTVELV
Sbjct: 721 STCTVQQESSKFEPDHPLAPEAPFDIGFRILPPLPAEFANENVINEHFSAFGDVRTVELV 780

Query: 781 SENSSSISNASSIYSANVTFLTRHSAEMAFENGKCRQGQDLKFVWLSSGKDPDDKSSEAS 840
           SENSSSISNASSIYSANVTFLTRHSAEMAFENGKCRQGQDLKFVWLS+GKDPDDKSSEAS
Sbjct: 781 SENSSSISNASSIYSANVTFLTRHSAEMAFENGKCRQGQDLKFVWLSNGKDPDDKSSEAS 840

Query: 841 RDVNMDPKNESEIILFIETSRDGEFENSTRDSCVEPSETGKVSPVIERDMN 891
           RDV+MDPKNESEI LFIETSRDGEF+NSTRDSCVEPSETGKVSPVIERDMN
Sbjct: 841 RDVDMDPKNESEISLFIETSRDGEFKNSTRDSCVEPSETGKVSPVIERDMN 891

[Close]
BLAST of Cp4.1LG04g05420 vs. NCBI nr
Match: KAG7022715.1 (Zinc finger CCCH domain-containing protein 41, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1737 bits (4499), Expect = 0.0
Identity = 881/891 (98.88%), Postives = 887/891 (99.55%), Query Frame = 0 

Query: 1   MELKVSYPKPDISSSEYVSDPEEKDISDDEDDDRNHKHRRRETHSQSLETDTREHDLRPY 60
           MELK+SYPKPDISSSEYVSDPEEKDISDDEDDDRNHKHRRRETHSQSLETDTREHDLRPY
Sbjct: 1   MELKISYPKPDISSSEYVSDPEEKDISDDEDDDRNHKHRRRETHSQSLETDTREHDLRPY 60

Query: 61  GKRSKPFENGRSFRDNDSQANEAWKSFNSSTLEKDIPGKFDKRRLGGVPGSRVAGDFNQR 120
           GKRSKPFENGRSFRDNDSQANEAWKSFNSSTLEKDIPGKFDKRRLGGVPGSRVAGDFNQR
Sbjct: 61  GKRSKPFENGRSFRDNDSQANEAWKSFNSSTLEKDIPGKFDKRRLGGVPGSRVAGDFNQR 120

Query: 121 IRANQAFSSDLSFGRGRGRESAPWNQFDSRFSPVDIASQIVHHGPFPPRLFAGRGLPSVS 180
           IRANQAFSSDLSFGRGRGRESAPWNQFDSRFSPVDIASQIVHHGPFPPRLFAGRGLPSVS
Sbjct: 121 IRANQAFSSDLSFGRGRGRESAPWNQFDSRFSPVDIASQIVHHGPFPPRLFAGRGLPSVS 180

Query: 181 TSQTAPWNTFGLIPGIPNGGLEPMHSIGFQGTLRPPINPSLNIGMPRQRCRDFEERGFCL 240
           TSQTAPWNTFGLIPGIPNGGLEPMHSIGFQGTLRPPINPSLNIGMPRQRCRDFEERGFCL
Sbjct: 181 TSQTAPWNTFGLIPGIPNGGLEPMHSIGFQGTLRPPINPSLNIGMPRQRCRDFEERGFCL 240

Query: 241 RGDMCPMEHGTNRIVVEDVQSLSQFNLPLSLPNAQLMGKTTGSLPTVSTSSTTVMCGKGL 300
           RGDMCPMEHGTNRIVVEDVQSLSQFNLPLSLPNAQLMGK+TGSLPTVSTSSTTVMCGKGL
Sbjct: 241 RGDMCPMEHGTNRIVVEDVQSLSQFNLPLSLPNAQLMGKSTGSLPTVSTSSTTVMCGKGL 300

Query: 301 LGKNTKPGVGDDSLAFHGVYSGSGNAAEADLYDPDQPLWNNNCPEKQNALSGMHSSKIDE 360
           LGKNTKPGVGDDSLAFHGVYSGSGNAAEADLYDPDQPLWNNNCPEKQNALSGMHSSKIDE
Sbjct: 301 LGKNTKPGVGDDSLAFHGVYSGSGNAAEADLYDPDQPLWNNNCPEKQNALSGMHSSKIDE 360

Query: 361 VETLVGDDPSDRNQVRKCDAADNGCTSRITVTSGQQVTSSFAGGRGGSRNRHDMKGKLDP 420
           VETLVGDDPSDRNQVRKCDAADNGCTSRITVTSGQQVTS FAGGRGGSRNRHDMKGKLDP
Sbjct: 361 VETLVGDDPSDRNQVRKCDAADNGCTSRITVTSGQQVTSLFAGGRGGSRNRHDMKGKLDP 420

Query: 421 VVSSSGYHENEVKEHNEVLTSVQGNSHQEKHTAQDDARTKAGDSSLKAHSDAMRTLRKPS 480
           VVSSSGYHENEVKEHNEVLTSVQGNSHQEKH AQDDARTKAGDSSLKAHSDAMRTLRKPS
Sbjct: 421 VVSSSGYHENEVKEHNEVLTSVQGNSHQEKHMAQDDARTKAGDSSLKAHSDAMRTLRKPS 480

Query: 481 QKAMRTLFVNGIPQQSNNTEALLSHFKKYGEVIDIYIPANSQRAFVQFSKREEAEAALKS 540
           QKAMRTLFVNGIPQQSNNTEALLSHFK+YGEVIDIYIPANSQRAFVQFSKREEAEAALKS
Sbjct: 481 QKAMRTLFVNGIPQQSNNTEALLSHFKRYGEVIDIYIPANSQRAFVQFSKREEAEAALKS 540

Query: 541 PDAVMGNRFIKLWWANRDSIPDDGVSSNNGIHVLPHHIAAASLPSIAVKGKNCVQVSTSK 600
           PDAVMGNRFIKLWWANRDSIPDDGVSSNNGIHVLPHHIAAASLPSIAVKGKNCVQVSTSK
Sbjct: 541 PDAVMGNRFIKLWWANRDSIPDDGVSSNNGIHVLPHHIAAASLPSIAVKGKNCVQVSTSK 600

Query: 601 GGISHPLESSLAAPDHSHAFNSPKKPPLQKKLENLEQLKEQLRKKQEMLDMKRNDFRRQL 660
           GGISHPLESSLAAPDHSHAFNSPKKPPLQKKLENLEQLKEQLRKKQEMLDMKRNDFRRQL
Sbjct: 601 GGISHPLESSLAAPDHSHAFNSPKKPPLQKKLENLEQLKEQLRKKQEMLDMKRNDFRRQL 660

Query: 661 DKLEKQTSGSKADAITGFSAKRLKVGVEADTSKLVSPKASESSIPLASPHTEVNGENVEH 720
           DKLEKQTSGSKADAITGFSAKRLKVGVEADTSKLVSPKASESSIPLASPHTEVNGENVEH
Sbjct: 661 DKLEKQTSGSKADAITGFSAKRLKVGVEADTSKLVSPKASESSIPLASPHTEVNGENVEH 720

Query: 721 STCTVQQESSKFEPDHPLAPEAPFDIGFRILPPLPAEFANENVIKEHFSAFGDVRTVELV 780
           STCTVQQESSKFEPDHPLAPEAPFDIGFRILPPLPAEFANENVI EHFSAFGDVRTVELV
Sbjct: 721 STCTVQQESSKFEPDHPLAPEAPFDIGFRILPPLPAEFANENVINEHFSAFGDVRTVELV 780

Query: 781 SENSSSISNASSIYSANVTFLTRHSAEMAFENGKCRQGQDLKFVWLSSGKDPDDKSSEAS 840
           SENSSSISNASSIYSANVTFLTRHSAEMAFENGKCRQGQDLKFVWLS+GKDPDDKSSEAS
Sbjct: 781 SENSSSISNASSIYSANVTFLTRHSAEMAFENGKCRQGQDLKFVWLSNGKDPDDKSSEAS 840

Query: 841 RDVNMDPKNESEIILFIETSRDGEFENSTRDSCVEPSETGKVSPVIERDMN 891
           RDV+MDPKNESEI LFIETSRDGEF+NSTRDSCVEPSETGKVSPVIERDMN
Sbjct: 841 RDVDMDPKNESEISLFIETSRDGEFKNSTRDSCVEPSETGKVSPVIERDMN 891

[Close]
BLAST of Cp4.1LG04g05420 vs. NCBI nr
Match: XP_022989082.1 (zinc finger CCCH domain-containing protein 41-like [Cucurbita maxima])

HSP 1 Score: 1709 bits (4427), Expect = 0.0
Identity = 869/891 (97.53%), Postives = 879/891 (98.65%), Query Frame = 0 

Query: 1   MELKVSYPKPDISSSEYVSDPEEKDISDDEDDDRNHKHRRRETHSQSLETDTREHDLRPY 60
           MELKVSYPKPDISSSEYVSDPEEKDISDDEDDDRNHKHRRRETHSQSLETDTREHDLRPY
Sbjct: 1   MELKVSYPKPDISSSEYVSDPEEKDISDDEDDDRNHKHRRRETHSQSLETDTREHDLRPY 60

Query: 61  GKRSKPFENGRSFRDNDSQANEAWKSFNSSTLEKDIPGKFDKRRLGGVPGSRVAGDFNQR 120
           GKRSKPFENGRSFRDNDSQANEAWKSFNSSTLEKDIPGKFDKRRLGGVPGSRVAGDFNQR
Sbjct: 61  GKRSKPFENGRSFRDNDSQANEAWKSFNSSTLEKDIPGKFDKRRLGGVPGSRVAGDFNQR 120

Query: 121 IRANQAFSSDLSFGRGRGRESAPWNQFDSRFSPVDIASQIVHHGPFPPRLFAGRGLPSVS 180
           IRANQAFSSDLSFGRGRGRESAPWNQFDSRFSPVDIASQIVHHGPFPPRLFAGRGLPSVS
Sbjct: 121 IRANQAFSSDLSFGRGRGRESAPWNQFDSRFSPVDIASQIVHHGPFPPRLFAGRGLPSVS 180

Query: 181 TSQTAPWNTFGLIPGIPNGGLEPMHSIGFQGTLRPPINPSLNIGMPRQRCRDFEERGFCL 240
           TSQTAPWNTFGLIPGIPNGGLEPMHSIGFQGTLRPPINP LNIGMPRQRCRDFEERGFCL
Sbjct: 181 TSQTAPWNTFGLIPGIPNGGLEPMHSIGFQGTLRPPINPPLNIGMPRQRCRDFEERGFCL 240

Query: 241 RGDMCPMEHGTNRIVVEDVQSLSQFNLPLSLPNAQLMGKTTGSLPTVSTSSTTVMCGKGL 300
           RGDMCPMEHGTNRIVVEDVQSLSQFNLPLSLPNAQLMGKTTGSLPTVSTSSTTVMCGKGL
Sbjct: 241 RGDMCPMEHGTNRIVVEDVQSLSQFNLPLSLPNAQLMGKTTGSLPTVSTSSTTVMCGKGL 300

Query: 301 LGKNTKPGVGDDSLAFHGVYSGSGNAAEADLYDPDQPLWNNNCPEKQNALSGMHSSKIDE 360
           LGKNTKPGVGDDSLAFHGVYSGSGNAAEADLYDPDQPLWNNNCPEKQNALSGMHSSKIDE
Sbjct: 301 LGKNTKPGVGDDSLAFHGVYSGSGNAAEADLYDPDQPLWNNNCPEKQNALSGMHSSKIDE 360

Query: 361 VETLVGDDPSDRNQVRKCDAADNGCTSRITVTSGQQVTSSFAGGRGGSRNRHDMKGKLDP 420
           VETLVGDDPSDRNQVRKCDAADNGCTSRITVTSGQQVTSSFAGGRGGSRNRHDMKGKLD 
Sbjct: 361 VETLVGDDPSDRNQVRKCDAADNGCTSRITVTSGQQVTSSFAGGRGGSRNRHDMKGKLDT 420

Query: 421 VVSSSGYHENEVKEHNEVLTSVQGNSHQEKHTAQDDARTKAGDSSLKAHSDAMRTLRKPS 480
           VVSSSGYHENEVKEHNEVLTSVQGNSHQEKH AQDDARTKAGDSSLKAHSDAM TLRKPS
Sbjct: 421 VVSSSGYHENEVKEHNEVLTSVQGNSHQEKHMAQDDARTKAGDSSLKAHSDAMHTLRKPS 480

Query: 481 QKAMRTLFVNGIPQQSNNTEALLSHFKKYGEVIDIYIPANSQRAFVQFSKREEAEAALKS 540
           QKAMRTLFVNGIPQQSNNTEALLSHFKKYGEVIDIYIPANSQRAFVQFSKREEAEAALKS
Sbjct: 481 QKAMRTLFVNGIPQQSNNTEALLSHFKKYGEVIDIYIPANSQRAFVQFSKREEAEAALKS 540

Query: 541 PDAVMGNRFIKLWWANRDSIPDDGVSSNNGIHVLPHHIAAASLPSIAVKGKNCVQVSTSK 600
           PDAVMGNRFIKLWWANRDSIPDDGVSSNNGIHVLPHHIAAASLPSIAVKGKNCVQVSTSK
Sbjct: 541 PDAVMGNRFIKLWWANRDSIPDDGVSSNNGIHVLPHHIAAASLPSIAVKGKNCVQVSTSK 600

Query: 601 GGISHPLESSLAAPDHSHAFNSPKKPPLQKKLENLEQLKEQLRKKQEMLDMKRNDFRRQL 660
           GGISHPLESSLAAPD+SHAFNSPKKPPLQKKLENLEQLKEQLRKKQ+MLDMKRNDFRRQL
Sbjct: 601 GGISHPLESSLAAPDNSHAFNSPKKPPLQKKLENLEQLKEQLRKKQDMLDMKRNDFRRQL 660

Query: 661 DKLEKQTSGSKADAITGFSAKRLKVGVEADTSKLVSPKASESSIPLASPHTEVNGENVEH 720
           DKLEKQTSGSKADAITGFSAKRLKVGVEAD+SKLVSPKASESSIPLASPHTEVNGENVEH
Sbjct: 661 DKLEKQTSGSKADAITGFSAKRLKVGVEADSSKLVSPKASESSIPLASPHTEVNGENVEH 720

Query: 721 STCTVQQESSKFEPDHPLAPEAPFDIGFRILPPLPAEFANENVIKEHFSAFGDVRTVELV 780
           +TCTVQ+ESSKFEP HPLAPEAPFDIGFRILPPLPAEFANENVIKEHFSAFG+VRT+ELV
Sbjct: 721 TTCTVQEESSKFEPVHPLAPEAPFDIGFRILPPLPAEFANENVIKEHFSAFGNVRTIELV 780

Query: 781 SENSSSISNASSIYSANVTFLTRHSAEMAFENGKCRQGQDLKFVWLSSGKDPDDKSSEAS 840
           SEN SSISNAS+ YSANVTFLTRHSAE AFENGKCRQGQDLKFVWLSSGKDPDDKSSEAS
Sbjct: 781 SENCSSISNASNTYSANVTFLTRHSAERAFENGKCRQGQDLKFVWLSSGKDPDDKSSEAS 840

Query: 841 RDVNMDPKNESEIILFIETSRDGEFENSTRDSCVEPSETGKVSPVIERDMN 891
           RDV+M+PK ESEIILFIET RD E ENSTRDSCVEPSETGKVSPVIERDMN
Sbjct: 841 RDVDMEPKKESEIILFIETLRDRESENSTRDSCVEPSETGKVSPVIERDMN 891

[Close]
BLAST of Cp4.1LG04g05420 vs. NCBI nr
Match: XP_038903817.1 (zinc finger CCCH domain-containing protein 41 [Benincasa hispida] >XP_038903818.1 zinc finger CCCH domain-containing protein 41 [Benincasa hispida])

HSP 1 Score: 1392 bits (3604), Expect = 0.0
Identity = 734/907 (80.93%), Postives = 782/907 (86.22%), Query Frame = 0 

Query: 1   MELKVSYPKPDISSSEYVSDPEEKDISDDEDDDRNHKHRRRETHSQSLETDTREHDLRPY 60
           MELKVSY KP ISSS+YVSDPEEKDISDDEDDDRNHKHRRRET SQSLE DT EH LRPY
Sbjct: 1   MELKVSYSKPGISSSDYVSDPEEKDISDDEDDDRNHKHRRRETRSQSLERDTHEHVLRPY 60

Query: 61  GKRSKPFENGRSFRDNDSQANEAWKSFNSSTLEKDIPGKFDKRRLGGVPGSRVAGDFNQR 120
           GKRSKPFENGRSFRDNDSQANEAWKSFN+ TLEKD PGKFDKRRLG VPG RVAGDFNQR
Sbjct: 61  GKRSKPFENGRSFRDNDSQANEAWKSFNTPTLEKDTPGKFDKRRLGAVPGPRVAGDFNQR 120

Query: 121 IRANQAFSSDLSFGRGRGRESAPWNQFDSRFSPVDIASQIVHHGPFPPRLFAGRGLPSVS 180
           IRANQ F  DLS GRGRGRES  WNQFDSRFSPVDIASQIVHHG FPP LFAGRGLPSVS
Sbjct: 121 IRANQTFLGDLSSGRGRGRESGTWNQFDSRFSPVDIASQIVHHGSFPPSLFAGRGLPSVS 180

Query: 181 TSQTAPWNTFGLIPGIPNGGLEPMHSIGFQGTLRPPINPSLNIGMPRQRCRDFEERGFCL 240
           T+QT PWN FGLIPGIPN GLE +H IG QGTLRPPINP LNIGMPRQRCRDFEERGFCL
Sbjct: 181 TAQTTPWNAFGLIPGIPNSGLESIHPIGLQGTLRPPINPPLNIGMPRQRCRDFEERGFCL 240

Query: 241 RGDMCPMEHGTNRIVVEDVQSLSQFNLPLSLPNAQLMGKTTGSLPTVSTSSTTVMCGKGL 300
           RGDMCPMEHG NRIVVEDVQSLSQFNLPLSLPNA LMGKTTGSLP VSTSST+VM GKGL
Sbjct: 241 RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAHLMGKTTGSLPAVSTSSTSVMSGKGL 300

Query: 301 LGKNTKPGVGDDSLAFHGVYSGSGNAAEADLYDPDQPLWNNNCPEKQNALSGMHSSKIDE 360
           LGKN KP VGDDSL FHGVYSGS +AAEADLYDPDQPLWNNNCPEK NALSGMHSSKIDE
Sbjct: 301 LGKNIKPAVGDDSLPFHGVYSGSASAAEADLYDPDQPLWNNNCPEKPNALSGMHSSKIDE 360

Query: 361 VETLVGDDPSDRNQVRKCDAADNGCTSRITVTSGQQVTSSFAGGRGGSRNRHDMKGKLDP 420
           VE+L+GDDPSDRNQVRKCDA DNGCTSR+  TSG QVTSS   GR GSRNR D+KGK DP
Sbjct: 361 VESLMGDDPSDRNQVRKCDAGDNGCTSRVAATSGAQVTSSSVWGRVGSRNRQDVKGKPDP 420

Query: 421 VVSSSGYHENEVKEHNEVLTSVQGNSHQEKHTAQDDARTKAGDSSLKAHSDA--MRTLRK 480
           V ++SG  +NE KEH EVL SV GN HQ+KH AQ+DA TKAGD S+KA SDA  MRT+RK
Sbjct: 421 V-NASGCLDNETKEHTEVLASVPGNPHQQKHMAQNDAHTKAGDLSIKAQSDANAMRTMRK 480

Query: 481 PSQKAMRTLFVNGIPQQSNNTEALLSHFKKYGEVIDIYIPANSQRAFVQFSKREEAEAAL 540
           PSQKAMRTLFVNGIP QSN TE LLSHF KYGEVIDIYIPANSQRAFVQFSKREEAEAAL
Sbjct: 481 PSQKAMRTLFVNGIPLQSNKTETLLSHFNKYGEVIDIYIPANSQRAFVQFSKREEAEAAL 540

Query: 541 KSPDAVMGNRFIKLWWANRDSIPDDGVSSNNGIHVLPHHIAAASLPSIAVKGKNCVQVST 600
           KSPDAVMGNRFIKLWWANRDSIPDDGVSSNNGIHV P HIAAASLPS+AVKGKN VQVST
Sbjct: 541 KSPDAVMGNRFIKLWWANRDSIPDDGVSSNNGIHVPPRHIAAASLPSLAVKGKNSVQVST 600

Query: 601 SKGGISHPLESSLAAPDHSHAFNSPK-KPPLQKKLENLEQLKEQLRKKQEMLDMKRNDFR 660
           SKG ISHPLESS AAPDHSHAF+SPK   PLQKKLENLEQLKE+LRKKQEMLDMKRNDFR
Sbjct: 601 SKGSISHPLESSSAAPDHSHAFSSPKVSSPLQKKLENLEQLKEELRKKQEMLDMKRNDFR 660

Query: 661 RQLDKLEKQTSGSKADAITGFSAKRLKVGVEADTSKLVSPKASESSIPLASPHTEVNGEN 720
           RQLDKLEKQ +G+KA+A+TG SAKRLKVG+EAD SKLV+PKAS+S I LASPHTEVN E+
Sbjct: 661 RQLDKLEKQATGNKAEAVTGSSAKRLKVGIEADASKLVTPKASDSGIALASPHTEVNREH 720

Query: 721 VEH-----STCTVQQESSKFEPDHPLAPEAPFDI----------GFRILPPLPAEFANEN 780
           VE+     +T  VQQESSKFEP HPLA EAPFDI          GF+ILPPL  +FANE+
Sbjct: 721 VEYPCPEATTSIVQQESSKFEPVHPLATEAPFDIDGEKLGSCLTGFKILPPLSVDFANED 780

Query: 781 VIKEHFSAFGDVRTVELVSENSSSISNASSIYSANVTFLTRHSAEMAFENGKCRQGQDLK 840
           VIK+HFS+ GDV TVELVSE+ + ISNAS+  SANVTFLTRHSAE AFE+GK  QGQDLK
Sbjct: 781 VIKKHFSSLGDVCTVELVSEDGNRISNASNNCSANVTFLTRHSAERAFEDGKSWQGQDLK 840

Query: 841 FVWLSSGKDPDDKSSEASRDVNMDPKNESEIILFIETSRDGEFENSTRDSCVEPSETGKV 889
           F+WLS  +DP   SS ASRD +M+P++E EII F  T  D E +NSTRD   EPSETGKV
Sbjct: 841 FIWLSGDEDPGGASSNASRDADMEPESEPEIIPFKVTPCDTESQNSTRDDGDEPSETGKV 900

[Close]
BLAST of Cp4.1LG04g05420 vs. ExPASy TrEMBL
Match: A0A6J1EJT5 (zinc finger CCCH domain-containing protein 41-like OS=Cucurbita moschata OX=3662 GN=LOC111435142 PE=4 SV=1)

HSP 1 Score: 1738 bits (4502), Expect = 0.0
Identity = 882/891 (98.99%), Postives = 887/891 (99.55%), Query Frame = 0 

Query: 1   MELKVSYPKPDISSSEYVSDPEEKDISDDEDDDRNHKHRRRETHSQSLETDTREHDLRPY 60
           MELK+SYPKPDISSSEYVSDPEEKDISDDEDDDRNHKHRRRETHSQSLETDTREHDLRPY
Sbjct: 1   MELKISYPKPDISSSEYVSDPEEKDISDDEDDDRNHKHRRRETHSQSLETDTREHDLRPY 60

Query: 61  GKRSKPFENGRSFRDNDSQANEAWKSFNSSTLEKDIPGKFDKRRLGGVPGSRVAGDFNQR 120
           GKRSKPFENGRSFRDNDSQANEAWKSFNSSTLEKDIPGKFDKRRLGGVPGSRVAGDFNQR
Sbjct: 61  GKRSKPFENGRSFRDNDSQANEAWKSFNSSTLEKDIPGKFDKRRLGGVPGSRVAGDFNQR 120

Query: 121 IRANQAFSSDLSFGRGRGRESAPWNQFDSRFSPVDIASQIVHHGPFPPRLFAGRGLPSVS 180
           IRANQAFSSDLSFGRGRGRESAPWNQFDSRFSPVDIASQIVHHGPFPPRLFAGRGLPSVS
Sbjct: 121 IRANQAFSSDLSFGRGRGRESAPWNQFDSRFSPVDIASQIVHHGPFPPRLFAGRGLPSVS 180

Query: 181 TSQTAPWNTFGLIPGIPNGGLEPMHSIGFQGTLRPPINPSLNIGMPRQRCRDFEERGFCL 240
           TSQTAPWNTFGLIPGIPNGGLEPMHSIGFQGTLRPPINPSLNIGMPRQRCRDFEERGFCL
Sbjct: 181 TSQTAPWNTFGLIPGIPNGGLEPMHSIGFQGTLRPPINPSLNIGMPRQRCRDFEERGFCL 240

Query: 241 RGDMCPMEHGTNRIVVEDVQSLSQFNLPLSLPNAQLMGKTTGSLPTVSTSSTTVMCGKGL 300
           RGDMCPMEHGTNRIVVEDVQSLSQFNLPLSLPNAQLMGK+TGSLPTVSTSSTTVMCGKGL
Sbjct: 241 RGDMCPMEHGTNRIVVEDVQSLSQFNLPLSLPNAQLMGKSTGSLPTVSTSSTTVMCGKGL 300

Query: 301 LGKNTKPGVGDDSLAFHGVYSGSGNAAEADLYDPDQPLWNNNCPEKQNALSGMHSSKIDE 360
           LGKNTKPGVGDDSLAFHGVYSGSGNAAEADLYDPDQPLWNNNCPEKQNALSGMHSSKIDE
Sbjct: 301 LGKNTKPGVGDDSLAFHGVYSGSGNAAEADLYDPDQPLWNNNCPEKQNALSGMHSSKIDE 360

Query: 361 VETLVGDDPSDRNQVRKCDAADNGCTSRITVTSGQQVTSSFAGGRGGSRNRHDMKGKLDP 420
           VETLVGDDPSDRNQVRKCDAADNGCTSRITVTSGQQVTS FAGGRGGSRNRHDMKGKLDP
Sbjct: 361 VETLVGDDPSDRNQVRKCDAADNGCTSRITVTSGQQVTSLFAGGRGGSRNRHDMKGKLDP 420

Query: 421 VVSSSGYHENEVKEHNEVLTSVQGNSHQEKHTAQDDARTKAGDSSLKAHSDAMRTLRKPS 480
           VVSSSGYHENEVKEHNEVLTSVQGNSHQEKH AQDDARTKAGDSSLKAHSDAMRTLRKPS
Sbjct: 421 VVSSSGYHENEVKEHNEVLTSVQGNSHQEKHMAQDDARTKAGDSSLKAHSDAMRTLRKPS 480

Query: 481 QKAMRTLFVNGIPQQSNNTEALLSHFKKYGEVIDIYIPANSQRAFVQFSKREEAEAALKS 540
           QKAMRTLFVNGIPQQSNNTEALLSHFKKYGEVIDIYIPANSQRAFVQFSKREEAEAALKS
Sbjct: 481 QKAMRTLFVNGIPQQSNNTEALLSHFKKYGEVIDIYIPANSQRAFVQFSKREEAEAALKS 540

Query: 541 PDAVMGNRFIKLWWANRDSIPDDGVSSNNGIHVLPHHIAAASLPSIAVKGKNCVQVSTSK 600
           PDAVMGNRFIKLWWANRDSIPDDGVSSNNGIHVLPHHIAAASLPSIAVKGKNCVQVSTSK
Sbjct: 541 PDAVMGNRFIKLWWANRDSIPDDGVSSNNGIHVLPHHIAAASLPSIAVKGKNCVQVSTSK 600

Query: 601 GGISHPLESSLAAPDHSHAFNSPKKPPLQKKLENLEQLKEQLRKKQEMLDMKRNDFRRQL 660
           GGISHPLESSLAAPDHSHAFNSPKKPPLQKKLENLEQLKEQLRKKQEMLDMKRNDFRRQL
Sbjct: 601 GGISHPLESSLAAPDHSHAFNSPKKPPLQKKLENLEQLKEQLRKKQEMLDMKRNDFRRQL 660

Query: 661 DKLEKQTSGSKADAITGFSAKRLKVGVEADTSKLVSPKASESSIPLASPHTEVNGENVEH 720
           DKLEKQTSGSKADAITGFSAKRLKVGVEADTSKLVSPKASESSIPLASPHTEVNGENVEH
Sbjct: 661 DKLEKQTSGSKADAITGFSAKRLKVGVEADTSKLVSPKASESSIPLASPHTEVNGENVEH 720

Query: 721 STCTVQQESSKFEPDHPLAPEAPFDIGFRILPPLPAEFANENVIKEHFSAFGDVRTVELV 780
           STCTVQQESSKFEPDHPLAPEAPFDIGFRILPPLPAEFANENVI EHFSAFGDVRTVELV
Sbjct: 721 STCTVQQESSKFEPDHPLAPEAPFDIGFRILPPLPAEFANENVINEHFSAFGDVRTVELV 780

Query: 781 SENSSSISNASSIYSANVTFLTRHSAEMAFENGKCRQGQDLKFVWLSSGKDPDDKSSEAS 840
           SENSSSISNASSIYSANVTFLTRHSAEMAFENGKCRQGQDLKFVWLS+GKDPDDKSSEAS
Sbjct: 781 SENSSSISNASSIYSANVTFLTRHSAEMAFENGKCRQGQDLKFVWLSNGKDPDDKSSEAS 840

Query: 841 RDVNMDPKNESEIILFIETSRDGEFENSTRDSCVEPSETGKVSPVIERDMN 891
           RDV+MDPKNESEI LFIETSRDGEF+NSTRDSCVEPSETGKVSPVIERDMN
Sbjct: 841 RDVDMDPKNESEISLFIETSRDGEFKNSTRDSCVEPSETGKVSPVIERDMN 891

[Close]
BLAST of Cp4.1LG04g05420 vs. ExPASy TrEMBL
Match: A0A6J1JET1 (zinc finger CCCH domain-containing protein 41-like OS=Cucurbita maxima OX=3661 GN=LOC111486260 PE=4 SV=1)

HSP 1 Score: 1709 bits (4427), Expect = 0.0
Identity = 869/891 (97.53%), Postives = 879/891 (98.65%), Query Frame = 0 

Query: 1   MELKVSYPKPDISSSEYVSDPEEKDISDDEDDDRNHKHRRRETHSQSLETDTREHDLRPY 60
           MELKVSYPKPDISSSEYVSDPEEKDISDDEDDDRNHKHRRRETHSQSLETDTREHDLRPY
Sbjct: 1   MELKVSYPKPDISSSEYVSDPEEKDISDDEDDDRNHKHRRRETHSQSLETDTREHDLRPY 60

Query: 61  GKRSKPFENGRSFRDNDSQANEAWKSFNSSTLEKDIPGKFDKRRLGGVPGSRVAGDFNQR 120
           GKRSKPFENGRSFRDNDSQANEAWKSFNSSTLEKDIPGKFDKRRLGGVPGSRVAGDFNQR
Sbjct: 61  GKRSKPFENGRSFRDNDSQANEAWKSFNSSTLEKDIPGKFDKRRLGGVPGSRVAGDFNQR 120

Query: 121 IRANQAFSSDLSFGRGRGRESAPWNQFDSRFSPVDIASQIVHHGPFPPRLFAGRGLPSVS 180
           IRANQAFSSDLSFGRGRGRESAPWNQFDSRFSPVDIASQIVHHGPFPPRLFAGRGLPSVS
Sbjct: 121 IRANQAFSSDLSFGRGRGRESAPWNQFDSRFSPVDIASQIVHHGPFPPRLFAGRGLPSVS 180

Query: 181 TSQTAPWNTFGLIPGIPNGGLEPMHSIGFQGTLRPPINPSLNIGMPRQRCRDFEERGFCL 240
           TSQTAPWNTFGLIPGIPNGGLEPMHSIGFQGTLRPPINP LNIGMPRQRCRDFEERGFCL
Sbjct: 181 TSQTAPWNTFGLIPGIPNGGLEPMHSIGFQGTLRPPINPPLNIGMPRQRCRDFEERGFCL 240

Query: 241 RGDMCPMEHGTNRIVVEDVQSLSQFNLPLSLPNAQLMGKTTGSLPTVSTSSTTVMCGKGL 300
           RGDMCPMEHGTNRIVVEDVQSLSQFNLPLSLPNAQLMGKTTGSLPTVSTSSTTVMCGKGL
Sbjct: 241 RGDMCPMEHGTNRIVVEDVQSLSQFNLPLSLPNAQLMGKTTGSLPTVSTSSTTVMCGKGL 300

Query: 301 LGKNTKPGVGDDSLAFHGVYSGSGNAAEADLYDPDQPLWNNNCPEKQNALSGMHSSKIDE 360
           LGKNTKPGVGDDSLAFHGVYSGSGNAAEADLYDPDQPLWNNNCPEKQNALSGMHSSKIDE
Sbjct: 301 LGKNTKPGVGDDSLAFHGVYSGSGNAAEADLYDPDQPLWNNNCPEKQNALSGMHSSKIDE 360

Query: 361 VETLVGDDPSDRNQVRKCDAADNGCTSRITVTSGQQVTSSFAGGRGGSRNRHDMKGKLDP 420
           VETLVGDDPSDRNQVRKCDAADNGCTSRITVTSGQQVTSSFAGGRGGSRNRHDMKGKLD 
Sbjct: 361 VETLVGDDPSDRNQVRKCDAADNGCTSRITVTSGQQVTSSFAGGRGGSRNRHDMKGKLDT 420

Query: 421 VVSSSGYHENEVKEHNEVLTSVQGNSHQEKHTAQDDARTKAGDSSLKAHSDAMRTLRKPS 480
           VVSSSGYHENEVKEHNEVLTSVQGNSHQEKH AQDDARTKAGDSSLKAHSDAM TLRKPS
Sbjct: 421 VVSSSGYHENEVKEHNEVLTSVQGNSHQEKHMAQDDARTKAGDSSLKAHSDAMHTLRKPS 480

Query: 481 QKAMRTLFVNGIPQQSNNTEALLSHFKKYGEVIDIYIPANSQRAFVQFSKREEAEAALKS 540
           QKAMRTLFVNGIPQQSNNTEALLSHFKKYGEVIDIYIPANSQRAFVQFSKREEAEAALKS
Sbjct: 481 QKAMRTLFVNGIPQQSNNTEALLSHFKKYGEVIDIYIPANSQRAFVQFSKREEAEAALKS 540

Query: 541 PDAVMGNRFIKLWWANRDSIPDDGVSSNNGIHVLPHHIAAASLPSIAVKGKNCVQVSTSK 600
           PDAVMGNRFIKLWWANRDSIPDDGVSSNNGIHVLPHHIAAASLPSIAVKGKNCVQVSTSK
Sbjct: 541 PDAVMGNRFIKLWWANRDSIPDDGVSSNNGIHVLPHHIAAASLPSIAVKGKNCVQVSTSK 600

Query: 601 GGISHPLESSLAAPDHSHAFNSPKKPPLQKKLENLEQLKEQLRKKQEMLDMKRNDFRRQL 660
           GGISHPLESSLAAPD+SHAFNSPKKPPLQKKLENLEQLKEQLRKKQ+MLDMKRNDFRRQL
Sbjct: 601 GGISHPLESSLAAPDNSHAFNSPKKPPLQKKLENLEQLKEQLRKKQDMLDMKRNDFRRQL 660

Query: 661 DKLEKQTSGSKADAITGFSAKRLKVGVEADTSKLVSPKASESSIPLASPHTEVNGENVEH 720
           DKLEKQTSGSKADAITGFSAKRLKVGVEAD+SKLVSPKASESSIPLASPHTEVNGENVEH
Sbjct: 661 DKLEKQTSGSKADAITGFSAKRLKVGVEADSSKLVSPKASESSIPLASPHTEVNGENVEH 720

Query: 721 STCTVQQESSKFEPDHPLAPEAPFDIGFRILPPLPAEFANENVIKEHFSAFGDVRTVELV 780
           +TCTVQ+ESSKFEP HPLAPEAPFDIGFRILPPLPAEFANENVIKEHFSAFG+VRT+ELV
Sbjct: 721 TTCTVQEESSKFEPVHPLAPEAPFDIGFRILPPLPAEFANENVIKEHFSAFGNVRTIELV 780

Query: 781 SENSSSISNASSIYSANVTFLTRHSAEMAFENGKCRQGQDLKFVWLSSGKDPDDKSSEAS 840
           SEN SSISNAS+ YSANVTFLTRHSAE AFENGKCRQGQDLKFVWLSSGKDPDDKSSEAS
Sbjct: 781 SENCSSISNASNTYSANVTFLTRHSAERAFENGKCRQGQDLKFVWLSSGKDPDDKSSEAS 840

Query: 841 RDVNMDPKNESEIILFIETSRDGEFENSTRDSCVEPSETGKVSPVIERDMN 891
           RDV+M+PK ESEIILFIET RD E ENSTRDSCVEPSETGKVSPVIERDMN
Sbjct: 841 RDVDMEPKKESEIILFIETLRDRESENSTRDSCVEPSETGKVSPVIERDMN 891

[Close]
BLAST of Cp4.1LG04g05420 vs. ExPASy TrEMBL
Match: A0A1S3B8B1 (zinc finger CCCH domain-containing protein 41 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487115 PE=4 SV=1)

HSP 1 Score: 1379 bits (3570), Expect = 0.0
Identity = 727/902 (80.60%), Postives = 777/902 (86.14%), Query Frame = 0 

Query: 1   MELKVSYPKPDISSSEYVSDPEEKDISDDEDDDRNHKHRRRETHSQSLETDTREHDLRPY 60
           MELKVSYPKP ISSS+YVSDPEEKDISDDEDDDRNHKHRRRET SQSLE DTREH LRPY
Sbjct: 1   MELKVSYPKPGISSSDYVSDPEEKDISDDEDDDRNHKHRRRETRSQSLERDTREHVLRPY 60

Query: 61  GKRSKPFENGRSFRDNDSQANEAWKSFNSSTLEKDIPGKFDKRRLGGVPGSRVAGDFNQR 120
           GKR+KPFENGRSFRDNDSQANEAWKSFN+ TLEKD PGKFDKRRLGGVPG RV GDFNQR
Sbjct: 61  GKRNKPFENGRSFRDNDSQANEAWKSFNAPTLEKDTPGKFDKRRLGGVPGPRVVGDFNQR 120

Query: 121 IRANQAFSSDLSFGRGRGRESAPWNQFDSRFSPVDIASQIVHHGPFPPRLFAGRGLPSVS 180
           IR NQ FS DLS GRGRGR+S  WNQFDSRFSPVDIASQIVHHG FPP LFAGRGLPSVS
Sbjct: 121 IRGNQGFSGDLSSGRGRGRDSGAWNQFDSRFSPVDIASQIVHHGSFPPSLFAGRGLPSVS 180

Query: 181 TSQTAPWNTFGLIPGIPNGGLEPMHSIGFQGTLRPPINPSLNIGMPRQRCRDFEERGFCL 240
           T+QTAPWN FGLIPGIP  GLE MH IG QGTLRPPINP LNIG+PRQRCRDFEERGFCL
Sbjct: 181 TAQTAPWNAFGLIPGIPTSGLETMHPIGLQGTLRPPINPPLNIGIPRQRCRDFEERGFCL 240

Query: 241 RGDMCPMEHGTNRIVVEDVQSLSQFNLPLSLPNAQLMGKTTGSLPTVSTSSTTVMCGKGL 300
           RGDMCPMEHG NRIVVEDVQSLSQFNLPLSLPNA L+GKTTGSLP VSTSSTTVM GKGL
Sbjct: 241 RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAHLIGKTTGSLPAVSTSSTTVMSGKGL 300

Query: 301 LGKNTKPGVGDDSLAFHGVYSGSGNAAEADLYDPDQPLWNNNCPEKQNALSGMHSSKIDE 360
           LGKN KP VGDDSL FHGVYSGSG+AAEADLYDPDQPLWNN+CPEK NALSGMHSSKIDE
Sbjct: 301 LGKNIKPSVGDDSLPFHGVYSGSGSAAEADLYDPDQPLWNNSCPEKPNALSGMHSSKIDE 360

Query: 361 VETLVGDDPSDRNQVRKCDAADNGCTSRITVTSGQQVTSSFAGGRGGSRNRHDMKGKLDP 420
           VE+ +GDDPSDRNQVRKCDA DNGCTSRIT  SG QVTSS   GR GSRNR D+KGKLDP
Sbjct: 361 VESFMGDDPSDRNQVRKCDAGDNGCTSRITAPSGSQVTSSSVWGRVGSRNRQDVKGKLDP 420

Query: 421 VVSSSGYHENEVKEHNEVLTSVQGNSHQEKHTAQDDARTKAGDSSLKAHSDA--MRTLRK 480
           V ++SG  +NEVKE N VL SVQGNSHQ+KH AQDD   KAGD SLKA SDA  MRT+RK
Sbjct: 421 V-NASGCLDNEVKEQNVVLASVQGNSHQQKHMAQDDPHNKAGDLSLKAQSDANTMRTMRK 480

Query: 481 PSQKAMRTLFVNGIPQQSNNTEALLSHFKKYGEVIDIYIPANSQRAFVQFSKREEAEAAL 540
           PSQKA  TLFVNGIP QSN TE LLSHF KYGEVIDIYIPAN+QRAFVQFSKREEAEAAL
Sbjct: 481 PSQKATCTLFVNGIPLQSNKTETLLSHFNKYGEVIDIYIPANTQRAFVQFSKREEAEAAL 540

Query: 541 KSPDAVMGNRFIKLWWANRDSIPDDGVSSNNGIHVLPHHIAAASLPSIAVKGKNCVQVST 600
           KSPDAVMGNRFIKLWWANRDSIPDDGVSSNNGIHV P HIAAASLPSIAVKGKN V VST
Sbjct: 541 KSPDAVMGNRFIKLWWANRDSIPDDGVSSNNGIHVPPRHIAAASLPSIAVKGKNSVPVST 600

Query: 601 SKGGISHPLESSLAAPDHSHAFNSPK-KPPLQKKLENLEQLKEQLRKKQEMLDMKRNDFR 660
           SKG ISHPL+SSLAAPDHSHAF+SPK   PLQKKLENLEQLKE+LRKKQ+MLDMKRNDFR
Sbjct: 601 SKGSISHPLDSSLAAPDHSHAFSSPKVSSPLQKKLENLEQLKEELRKKQQMLDMKRNDFR 660

Query: 661 RQLDKLEKQTSGSKADAITGFSAKRLKVGVEADTSKLVSPKASESSIPLASPHTEVNGEN 720
           RQLDKLEKQ +G+KA+A+TG SAKRLKVG+EADTSKL  PKAS+SS+ LASPHTEVNGE+
Sbjct: 661 RQLDKLEKQATGNKAEAVTGSSAKRLKVGIEADTSKL-GPKASDSSVALASPHTEVNGEH 720

Query: 721 VEHSTCTVQQESSKFEPDHPLAPEAPFD----------IGFRILPPLPAEFANENVIKEH 780
            E +T  VQQESSKFEP   L  EAPFD           GF+I+PPLPA+FANE+VIK+H
Sbjct: 721 PEPTTSIVQQESSKFEPVDSLTTEAPFDNEGEKLGSCSTGFKIVPPLPADFANEDVIKQH 780

Query: 781 FSAFGDVRTVELVSENSSSISNASSIYSANVTFLTRHSAEMAFENGKCRQGQDLKFVWLS 840
           FSA GDV TVELVSE+   ISNAS+  SANVTFLTRHSAE AF +G+  QGQDLKF+WLS
Sbjct: 781 FSALGDVCTVELVSEDGVRISNASNNCSANVTFLTRHSAERAFVDGRSWQGQDLKFIWLS 840

Query: 841 SGKDPDDKSSEASRDVNMDPKNESEIILFIETSRDGEFENSTRDSCVEPSETGKVSPVIE 889
           S KDP   SS+ SRD +M+P+NE+EII   ET    E ++ T+D   EP ETGKVS VIE
Sbjct: 841 SDKDPHRTSSDTSRDADMEPENEAEIISLNETPCHKESQSPTQDDSDEPLETGKVSAVIE 900

[Close]
BLAST of Cp4.1LG04g05420 vs. ExPASy TrEMBL
Match: A0A6J1DF65 (zinc finger CCCH domain-containing protein 41 OS=Momordica charantia OX=3673 GN=LOC111019938 PE=4 SV=1)

HSP 1 Score: 1379 bits (3570), Expect = 0.0
Identity = 728/907 (80.26%), Postives = 781/907 (86.11%), Query Frame = 0 

Query: 1   MELKVSYPKPDISSSEYVSDPEEKDISDDEDDDRNHKHRRRETHSQSLETDTREHDLRPY 60
           MELKVSYPKP ISSS+YVSDPEEKDISDDEDDDRNHKHRRRET SQSLE DTREH LRPY
Sbjct: 1   MELKVSYPKPGISSSDYVSDPEEKDISDDEDDDRNHKHRRRETRSQSLERDTREHVLRPY 60

Query: 61  GKRSKPFENGRSFRDNDSQANEAWKSFNSSTLEKDIPGKFDKRRLGGVPGSRVAGDFNQR 120
           GKR+KPFENGRSFR+N+SQA+EAWKSFN+   EKDIPGKFDKRRLG VPG R+ GDFNQR
Sbjct: 61  GKRNKPFENGRSFRENESQASEAWKSFNTPNFEKDIPGKFDKRRLGAVPGPRLTGDFNQR 120

Query: 121 IRANQAFSSDLSFGRGRGRESAPWNQFDSRFSPVDIASQIVHHGPFPPRLFAGRGLPSVS 180
           IRANQ FS DLS GRGRGRE   WNQFDSRFSPVDIASQIVHHG FPP LFAGRGLP+VS
Sbjct: 121 IRANQTFSGDLSAGRGRGREPGTWNQFDSRFSPVDIASQIVHHGSFPPSLFAGRGLPNVS 180

Query: 181 TSQTAPWNTFGLIPGIPNGGLEPMHSIGFQGTLRPPINPSLNIGMPRQRCRDFEERGFCL 240
           T+QTAPWN FGL+PG+PN GLE +HSIG QGTLRPPINP LNIG+PRQRCRDFEERGFCL
Sbjct: 181 TAQTAPWNAFGLLPGMPNNGLETIHSIGLQGTLRPPINPPLNIGIPRQRCRDFEERGFCL 240

Query: 241 RGDMCPMEHGTNRIVVEDVQSLSQFNLPLSLPNAQLMGKTTGSLPTVSTSSTTVMCGKGL 300
           RGDMCPMEHG NRIVVEDVQSLSQFNLPLSLPNA LMGK TGSLP VSTSST+VM GKGL
Sbjct: 241 RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAHLMGKATGSLPAVSTSSTSVMSGKGL 300

Query: 301 LGKNTKPGVGDDSLAFHGVYSGSGNAAEADLYDPDQPLWNNNCPEKQNALSGMHSSKIDE 360
           LGKN+KPGVGDDSL F G YSGSG AAEADLYDPDQPLWNNNCPEK NALS MHSSKIDE
Sbjct: 301 LGKNSKPGVGDDSLGF-GAYSGSGCAAEADLYDPDQPLWNNNCPEKSNALSAMHSSKIDE 360

Query: 361 VETLVGDDPSDRNQVRKCDAADNGCTSRITVTSGQQVTSSFAGGRGGSRNRHDMKGKLDP 420
           VE+L+GDDPSDRNQVRKCDAADNGCTSR T  SG QVTSS   GR GSRNR D KGK+DP
Sbjct: 361 VESLMGDDPSDRNQVRKCDAADNGCTSRTTAASGSQVTSSSIWGRVGSRNRQDAKGKVDP 420

Query: 421 VVSSSGYHENEVKEHNEVLTSVQGNSHQEKHTAQDDARTKAGDSSLKAHSDAMRTLRKPS 480
           VVSSSG  ENEVKEHNEVLTSVQGNSHQ+KH  QDDA TKA        SD MRT+RKPS
Sbjct: 421 VVSSSGCLENEVKEHNEVLTSVQGNSHQQKHMVQDDAHTKA-------QSDTMRTMRKPS 480

Query: 481 QKAMRTLFVNGIPQQSNNTEALLSHFKKYGEVIDIYIPANSQRAFVQFSKREEAEAALKS 540
           QKA RTLFVNGIPQQSN TE LLSHFKKYGEVIDIYIPANSQRAFVQFSKREEAEAALKS
Sbjct: 481 QKATRTLFVNGIPQQSNKTETLLSHFKKYGEVIDIYIPANSQRAFVQFSKREEAEAALKS 540

Query: 541 PDAVMGNRFIKLWWANRDSIPDDGVSSNNGIHVLPHHIAAASLPSIAVKGKNCVQVSTSK 600
           PDAVMGNRFIKLWWANRDSIPDDGV SNNGIHV P HIAAASLPS+A+KGKN  QV TSK
Sbjct: 541 PDAVMGNRFIKLWWANRDSIPDDGVGSNNGIHVPPRHIAAASLPSLAIKGKNTGQVPTSK 600

Query: 601 GGISHPLESSLAAPDHSHAFNSPK-KPPLQKKLENLEQLKEQLRKKQEMLDMKRNDFRRQ 660
             I H L+SSLAA DHSHAFNSPK   PLQKKLENLEQLKE+LRKKQEML MKRNDFRRQ
Sbjct: 601 VSIPHSLDSSLAAVDHSHAFNSPKVSSPLQKKLENLEQLKEELRKKQEMLAMKRNDFRRQ 660

Query: 661 LDKLEKQTSGSKADAITGFSAKRLKVGVEADTSKLVSPKASESSIPLASPHTEVNGENVE 720
           LDKLEKQT+G+KA+A+ GFSAKRLKVGVEAD +KLV+PKAS+S I  ASPHTEVNGENVE
Sbjct: 661 LDKLEKQTTGNKAEAVIGFSAKRLKVGVEADVTKLVTPKASDSGIASASPHTEVNGENVE 720

Query: 721 -----HSTCTVQQESSKFEPDHPLAPEAPFDI----------GFRILPPLPAEFANENVI 780
                 +T T QQESSKF   HPLA ++ FDI          GFRI+PPLPAEF N +V+
Sbjct: 721 CPYPEPTTSTAQQESSKFGLVHPLASKSAFDIDTKKLDSCATGFRIVPPLPAEFTNVDVV 780

Query: 781 KEHFSAFGDVRTVELVSENSSSISNASSIYSANVTFLTRHSAEMAFENGKCRQGQDLKFV 840
           KEHFS+FGDV TVELVSE+ + +SNAS+  SANVTFLTRHSAE AFE+GKC QGQDLKF+
Sbjct: 781 KEHFSSFGDVCTVELVSEDDNRVSNASNNCSANVTFLTRHSAERAFEDGKCWQGQDLKFI 840

Query: 841 WLSS-GKDPDDKSSEASRDVNMDPKNESEIILFIETSRDGE-FENSTRDSCVEPSETGKV 889
           WLSS GK+PD  S EASRD +M+P++E+E I+F ET RD E  ENSTRD+ VEPSETGKV
Sbjct: 841 WLSSSGKNPDGASPEASRDADMEPESEAESIVFKETPRDEEESENSTRDNDVEPSETGKV 899

[Close]
BLAST of Cp4.1LG04g05420 vs. ExPASy TrEMBL
Match: A0A5A7UCY7 (Zinc finger CCCH domain-containing protein 41 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold135G00130 PE=4 SV=1)

HSP 1 Score: 1379 bits (3568), Expect = 0.0
Identity = 727/902 (80.60%), Postives = 776/902 (86.03%), Query Frame = 0 

Query: 1   MELKVSYPKPDISSSEYVSDPEEKDISDDEDDDRNHKHRRRETHSQSLETDTREHDLRPY 60
           MELKVSYPKP ISSS+YVSDPEEKDISDDEDDDRNHKHRRRET SQSLE DTREH LRPY
Sbjct: 1   MELKVSYPKPGISSSDYVSDPEEKDISDDEDDDRNHKHRRRETRSQSLERDTREHVLRPY 60

Query: 61  GKRSKPFENGRSFRDNDSQANEAWKSFNSSTLEKDIPGKFDKRRLGGVPGSRVAGDFNQR 120
           GKR+KPFENGRSFRDNDSQANEAWKSFN+ TLEKD PGKFDKRRLGGVPG RV GDFNQR
Sbjct: 61  GKRNKPFENGRSFRDNDSQANEAWKSFNAPTLEKDTPGKFDKRRLGGVPGPRVVGDFNQR 120

Query: 121 IRANQAFSSDLSFGRGRGRESAPWNQFDSRFSPVDIASQIVHHGPFPPRLFAGRGLPSVS 180
           IR NQ FS DLS GRGRGR+S  WNQFDSRFSPVDIASQIVHHG FPP LFAGRGLPSVS
Sbjct: 121 IRGNQGFSGDLSSGRGRGRDSGAWNQFDSRFSPVDIASQIVHHGSFPPSLFAGRGLPSVS 180

Query: 181 TSQTAPWNTFGLIPGIPNGGLEPMHSIGFQGTLRPPINPSLNIGMPRQRCRDFEERGFCL 240
           T+QTAPWN FGLIPGIP  GLE MH IG QGTLRPPINP LNIG+PRQRCRDFEERGFCL
Sbjct: 181 TAQTAPWNAFGLIPGIPTSGLETMHPIGLQGTLRPPINPPLNIGIPRQRCRDFEERGFCL 240

Query: 241 RGDMCPMEHGTNRIVVEDVQSLSQFNLPLSLPNAQLMGKTTGSLPTVSTSSTTVMCGKGL 300
           RGDMCPMEHG NRIVVEDVQSLSQFNLPLSLPNA L+GKTTGSLP VSTSSTTVM GKGL
Sbjct: 241 RGDMCPMEHGINRIVVEDVQSLSQFNLPLSLPNAHLIGKTTGSLPAVSTSSTTVMSGKGL 300

Query: 301 LGKNTKPGVGDDSLAFHGVYSGSGNAAEADLYDPDQPLWNNNCPEKQNALSGMHSSKIDE 360
           LGKN KP VGDDSL FHGVYSGSG+AAEADLYDPDQPLWNN+CPEK NALSGMHSSKIDE
Sbjct: 301 LGKNIKPSVGDDSLPFHGVYSGSGSAAEADLYDPDQPLWNNSCPEKPNALSGMHSSKIDE 360

Query: 361 VETLVGDDPSDRNQVRKCDAADNGCTSRITVTSGQQVTSSFAGGRGGSRNRHDMKGKLDP 420
           VE+ +GDDPSDRNQVRKCDA DNGCTSRIT  SG QVTSS   GR GSRNR D+KGKLDP
Sbjct: 361 VESFMGDDPSDRNQVRKCDAGDNGCTSRITAPSGSQVTSSSVWGRVGSRNRQDVKGKLDP 420

Query: 421 VVSSSGYHENEVKEHNEVLTSVQGNSHQEKHTAQDDARTKAGDSSLKAHSDA--MRTLRK 480
           V ++SG  +NEVKE N VL SVQGNSHQ+KH AQDD   KAGD SLKA SDA  MRT+RK
Sbjct: 421 V-NASGCLDNEVKEQNVVLASVQGNSHQQKHMAQDDPHNKAGDLSLKAQSDANTMRTMRK 480

Query: 481 PSQKAMRTLFVNGIPQQSNNTEALLSHFKKYGEVIDIYIPANSQRAFVQFSKREEAEAAL 540
           PSQKA  TLFVNGIP QSN TE LLSHF KYGEVIDIYIPANSQRAFVQFSKREEAEAAL
Sbjct: 481 PSQKATCTLFVNGIPLQSNKTETLLSHFNKYGEVIDIYIPANSQRAFVQFSKREEAEAAL 540

Query: 541 KSPDAVMGNRFIKLWWANRDSIPDDGVSSNNGIHVLPHHIAAASLPSIAVKGKNCVQVST 600
           KSPDAVMGNRFIKLWWANRDSIPDDGVSSNNGIHV P HIAAASLPSIAVKGKN V VST
Sbjct: 541 KSPDAVMGNRFIKLWWANRDSIPDDGVSSNNGIHVPPRHIAAASLPSIAVKGKNSVPVST 600

Query: 601 SKGGISHPLESSLAAPDHSHAFNSPK-KPPLQKKLENLEQLKEQLRKKQEMLDMKRNDFR 660
           SKG ISHPL+SSLAAPDHSHAF+SPK   PLQKKLENLEQLKE+LRKKQ+MLDMKRNDFR
Sbjct: 601 SKGSISHPLDSSLAAPDHSHAFSSPKVSSPLQKKLENLEQLKEELRKKQQMLDMKRNDFR 660

Query: 661 RQLDKLEKQTSGSKADAITGFSAKRLKVGVEADTSKLVSPKASESSIPLASPHTEVNGEN 720
           RQLDKLEKQ +G+KA+A+TG SAKRLKVG+EADTSKL  PKAS+S + LASPHTEVNGE+
Sbjct: 661 RQLDKLEKQATGNKAEAVTGSSAKRLKVGIEADTSKL-GPKASDSCVALASPHTEVNGEH 720

Query: 721 VEHSTCTVQQESSKFEPDHPLAPEAPFD----------IGFRILPPLPAEFANENVIKEH 780
            E +T  VQQESSKFEP   L  EAPFD           GF+I+PPLPA+FANE+VIK+H
Sbjct: 721 PEPTTSIVQQESSKFEPVDSLTTEAPFDNEGEKLGSCSTGFKIVPPLPADFANEDVIKQH 780

Query: 781 FSAFGDVRTVELVSENSSSISNASSIYSANVTFLTRHSAEMAFENGKCRQGQDLKFVWLS 840
           FSA GDV TVELVSE+   ISNAS+  SANVTFLTRHSAE AF +G+  QGQDLKF+WLS
Sbjct: 781 FSALGDVCTVELVSEDGVRISNASNNCSANVTFLTRHSAERAFVDGRSWQGQDLKFIWLS 840

Query: 841 SGKDPDDKSSEASRDVNMDPKNESEIILFIETSRDGEFENSTRDSCVEPSETGKVSPVIE 889
           S KDP   SS+ SRD +M+P+NE+EII   ET    E ++ T+D   EP ETGKVS VIE
Sbjct: 841 SDKDPHRTSSDTSRDADMEPENEAEIISLNETPCHKESQSPTQDDSDEPLETGKVSAVIE 900

[Close]
BLAST of Cp4.1LG04g05420 vs. TAIR 10
Match: AT3G27700.1 (zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein )

HSP 1 Score: 562.4 bits (1448), Expect = 6.6e-160
Identity = 391/935 (41.82%), Postives = 539/935 (57.65%), Query Frame = 0 

Query: 1   MELKVSYPKPDI-SSSEYVSDPEEK-DISDDEDDDRNHKHRRR-ETHSQSLETDTREHDL 60
           MEL VS PK  + S  + +SDPEE+ +IS++EDDDRNHKHRR+ ET SQSLE D+ +   
Sbjct: 1   MELSVSSPKQSVLSPPDCMSDPEEEHEISEEEDDDRNHKHRRKEETRSQSLEQDSSDQAF 60

Query: 61  -RPYGKRSKPFENGRSFRDNDSQANEAWKSFNSSTLEKDIPGKFDKRRLGGVPGSRVAGD 120
            RPY K  + +ENG SF ++                        +KR  G   G RV  D
Sbjct: 61  SRPYRKNYRHYENGNSFSEH------------------------EKRSFGTGSGQRVQFD 120

Query: 121 FNQRIRANQAFSSDLSFGRGRGRESAPWNQFDSRFSPVDIASQIVHHGPFPPRLFAGRGL 180
            NQR+R+N  FS D   GRGRG   + W Q DSRF+PVD++S +V  G     +F GRGL
Sbjct: 121 -NQRMRSNPMFSRDSGPGRGRGNYGS-WAQRDSRFNPVDLSSHMVQVGSMGQGMFGGRGL 180

Query: 181 PSVSTSQTAPWNTFGLIPGIPNGGLEPMHSIGFQGTLRPPINPSLNIGMPRQRCRDFEER 240
             VS +Q+APW  FG+IPG+PNGGL+  H +  QG+LRPP+N  LN+G+PRQRCRDFEER
Sbjct: 181 AGVSAAQSAPWPPFGMIPGVPNGGLDGFHHL--QGSLRPPLNAPLNMGIPRQRCRDFEER 240

Query: 241 GFCLRGDMCPMEHGTNRIVVEDVQSLSQFNLPLSLPNAQLMGKTTGSLPTVSTSSTTVMC 300
           GFCLRGDMCPMEHG NRIVV+DVQSLSQFNLP+S+P A  +  ++  +P       + M 
Sbjct: 241 GFCLRGDMCPMEHGMNRIVVDDVQSLSQFNLPVSVPGAPHLAASSKQVP-AQFGGASFMN 300

Query: 301 GKGLLGKNTKPGVGDDSLAFHGVYSGSGNAAEADLYDPDQPLWNNNCPEKQNALSGMHSS 360
            KG  G+  + G+  D L +   Y  +G     D YDPDQPLWNN+  E   A+S ++S 
Sbjct: 301 PKGAHGRTNEGGMAVDGLGYGDAYPSAGG---TDFYDPDQPLWNNSTGETSGAISTLNSH 360

Query: 361 KIDEVETLVGDDPSDRNQVRKCDAADNGCTSRITVTSGQQVTSSFAGGRGGSRNRHDMKG 420
            +DE    +     D NQ    DAA+NGC  R + ++ Q V     G   GS ++ + K 
Sbjct: 361 GVDENVAPL----DDSNQ----DAAENGCGIRDSRSTSQSVW----GRMKGSNSQANSKE 420

Query: 421 KLDPVVSSSGYHENEVKEHNEVLTSVQGNSH-QEKHTAQDDARTKAGDSSLKAHSDAMRT 480
           K D V++SS   E+++KE      SV  + H ++ H  +  A  K  DSS    +D M  
Sbjct: 421 KADAVLNSSAVPEDQLKE-----VSVNSSRHGKQNHVGESVA--KVVDSS-NISNDMMNN 480

Query: 481 LRKPSQKAMRTLFVNGIPQQSNNTEALLSHFKKYGEVIDIYIPANSQRAFVQFSKREEAE 540
            RKP+QKAMRTLFVN +P +SN  + +L+HF+K+G+VIDI+IP NS+RAFVQFSKREEAE
Sbjct: 481 TRKPTQKAMRTLFVNYVPHESNRRDLILAHFQKFGKVIDIHIPVNSERAFVQFSKREEAE 540

Query: 541 AALKSPDAVMGNRFIKLWWANRDSIPDDGVSSNNGIHVLPHHIAAASLPS---IAVKGKN 600
           +AL++PDAVMGNRFIKLWWANRDSIPD+G+S+ +G  +    + A+   +   IA   K+
Sbjct: 541 SALRAPDAVMGNRFIKLWWANRDSIPDNGLSTGSGASMKGRSMTASGAQNQFPIAAASKS 600

Query: 601 CVQVSTSKGGISHPLESSLAAPDHSH-------AFNSPKKPPL-QKKLENLEQLKEQLRK 660
               S +K     P   +  AP  S          + PK  PL QKK + LE+LKE LRK
Sbjct: 601 NHVSSIAK----VPTFQTGGAPSSSEQPKPVVVTTSGPKVTPLQQKKADTLERLKETLRK 660

Query: 661 KQEMLDMKRNDFRRQLDKLEKQTSGSKADAITGFSAKRLKVGVEADTSKLVSPKASESS- 720
           KQEML+ KRN++R++L  LEKQ +  K +      AKR+K+   +D+   ++   +ESS 
Sbjct: 661 KQEMLEQKRNEYRKKLATLEKQGTVVKREEADEPDAKRVKLDTASDSGAAIASPKTESST 720

Query: 721 ---IPLASPHTEVNGENVEHSTCTVQQESSKFEP---------DHPLAPEAPFD---IGF 780
              +P+  P +       + ST T   +S  F+          + P+      D      
Sbjct: 721 DKKVPILKPLS-----TAKLSTETPSPDSKNFKQRPYSFTTSLNAPMVNRYKLDNRTTTI 780

Query: 781 RILPPLPAEFANENVIKEHFSAFGDVRTVELVSENSSSISNASSIYSAN------VTFLT 840
           +++PPLP   A+  V+KEHFS++G+V  VEL  E+++SI +     + N      VTF+ 
Sbjct: 781 KVVPPLPTGLADVAVVKEHFSSYGEVSKVEL--EDNASIDSGKDHETQNESRAACVTFVK 840

Query: 841 RHSAEMAFENGKCRQGQDLKFVWL-------SSGKDPDDKSSEASRDVNMDPKNESEII- 880
           R +AE AF N KC Q   L+ VW+       S+  + +  S   SRD N+  KN+   + 
Sbjct: 841 RSAAEKAFANAKCWQEHTLQLVWVTRQSNRESNNNNNNSNSLSVSRD-NLSSKNKCASVS 871

[Close]
BLAST of Cp4.1LG04g05420 vs. TAIR 10
Match: AT3G27700.2 (zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein )

HSP 1 Score: 562.4 bits (1448), Expect = 6.6e-160
Identity = 391/935 (41.82%), Postives = 539/935 (57.65%), Query Frame = 0 

Query: 1   MELKVSYPKPDI-SSSEYVSDPEEK-DISDDEDDDRNHKHRRR-ETHSQSLETDTREHDL 60
           MEL VS PK  + S  + +SDPEE+ +IS++EDDDRNHKHRR+ ET SQSLE D+ +   
Sbjct: 1   MELSVSSPKQSVLSPPDCMSDPEEEHEISEEEDDDRNHKHRRKEETRSQSLEQDSSDQAF 60

Query: 61  -RPYGKRSKPFENGRSFRDNDSQANEAWKSFNSSTLEKDIPGKFDKRRLGGVPGSRVAGD 120
            RPY K  + +ENG SF ++                        +KR  G   G RV  D
Sbjct: 61  SRPYRKNYRHYENGNSFSEH------------------------EKRSFGTGSGQRVQFD 120

Query: 121 FNQRIRANQAFSSDLSFGRGRGRESAPWNQFDSRFSPVDIASQIVHHGPFPPRLFAGRGL 180
            NQR+R+N  FS D   GRGRG   + W Q DSRF+PVD++S +V  G     +F GRGL
Sbjct: 121 -NQRMRSNPMFSRDSGPGRGRGNYGS-WAQRDSRFNPVDLSSHMVQVGSMGQGMFGGRGL 180

Query: 181 PSVSTSQTAPWNTFGLIPGIPNGGLEPMHSIGFQGTLRPPINPSLNIGMPRQRCRDFEER 240
             VS +Q+APW  FG+IPG+PNGGL+  H +  QG+LRPP+N  LN+G+PRQRCRDFEER
Sbjct: 181 AGVSAAQSAPWPPFGMIPGVPNGGLDGFHHL--QGSLRPPLNAPLNMGIPRQRCRDFEER 240

Query: 241 GFCLRGDMCPMEHGTNRIVVEDVQSLSQFNLPLSLPNAQLMGKTTGSLPTVSTSSTTVMC 300
           GFCLRGDMCPMEHG NRIVV+DVQSLSQFNLP+S+P A  +  ++  +P       + M 
Sbjct: 241 GFCLRGDMCPMEHGMNRIVVDDVQSLSQFNLPVSVPGAPHLAASSKQVP-AQFGGASFMN 300

Query: 301 GKGLLGKNTKPGVGDDSLAFHGVYSGSGNAAEADLYDPDQPLWNNNCPEKQNALSGMHSS 360
            KG  G+  + G+  D L +   Y  +G     D YDPDQPLWNN+  E   A+S ++S 
Sbjct: 301 PKGAHGRTNEGGMAVDGLGYGDAYPSAGG---TDFYDPDQPLWNNSTGETSGAISTLNSH 360

Query: 361 KIDEVETLVGDDPSDRNQVRKCDAADNGCTSRITVTSGQQVTSSFAGGRGGSRNRHDMKG 420
            +DE    +     D NQ    DAA+NGC  R + ++ Q V     G   GS ++ + K 
Sbjct: 361 GVDENVAPL----DDSNQ----DAAENGCGIRDSRSTSQSVW----GRMKGSNSQANSKE 420

Query: 421 KLDPVVSSSGYHENEVKEHNEVLTSVQGNSH-QEKHTAQDDARTKAGDSSLKAHSDAMRT 480
           K D V++SS   E+++KE      SV  + H ++ H  +  A  K  DSS    +D M  
Sbjct: 421 KADAVLNSSAVPEDQLKE-----VSVNSSRHGKQNHVGESVA--KVVDSS-NISNDMMNN 480

Query: 481 LRKPSQKAMRTLFVNGIPQQSNNTEALLSHFKKYGEVIDIYIPANSQRAFVQFSKREEAE 540
            RKP+QKAMRTLFVN +P +SN  + +L+HF+K+G+VIDI+IP NS+RAFVQFSKREEAE
Sbjct: 481 TRKPTQKAMRTLFVNYVPHESNRRDLILAHFQKFGKVIDIHIPVNSERAFVQFSKREEAE 540

Query: 541 AALKSPDAVMGNRFIKLWWANRDSIPDDGVSSNNGIHVLPHHIAAASLPS---IAVKGKN 600
           +AL++PDAVMGNRFIKLWWANRDSIPD+G+S+ +G  +    + A+   +   IA   K+
Sbjct: 541 SALRAPDAVMGNRFIKLWWANRDSIPDNGLSTGSGASMKGRSMTASGAQNQFPIAAASKS 600

Query: 601 CVQVSTSKGGISHPLESSLAAPDHSH-------AFNSPKKPPL-QKKLENLEQLKEQLRK 660
               S +K     P   +  AP  S          + PK  PL QKK + LE+LKE LRK
Sbjct: 601 NHVSSIAK----VPTFQTGGAPSSSEQPKPVVVTTSGPKVTPLQQKKADTLERLKETLRK 660

Query: 661 KQEMLDMKRNDFRRQLDKLEKQTSGSKADAITGFSAKRLKVGVEADTSKLVSPKASESS- 720
           KQEML+ KRN++R++L  LEKQ +  K +      AKR+K+   +D+   ++   +ESS 
Sbjct: 661 KQEMLEQKRNEYRKKLATLEKQGTVVKREEADEPDAKRVKLDTASDSGAAIASPKTESST 720

Query: 721 ---IPLASPHTEVNGENVEHSTCTVQQESSKFEP---------DHPLAPEAPFD---IGF 780
              +P+  P +       + ST T   +S  F+          + P+      D      
Sbjct: 721 DKKVPILKPLS-----TAKLSTETPSPDSKNFKQRPYSFTTSLNAPMVNRYKLDNRTTTI 780

Query: 781 RILPPLPAEFANENVIKEHFSAFGDVRTVELVSENSSSISNASSIYSAN------VTFLT 840
           +++PPLP   A+  V+KEHFS++G+V  VEL  E+++SI +     + N      VTF+ 
Sbjct: 781 KVVPPLPTGLADVAVVKEHFSSYGEVSKVEL--EDNASIDSGKDHETQNESRAACVTFVK 840

Query: 841 RHSAEMAFENGKCRQGQDLKFVWL-------SSGKDPDDKSSEASRDVNMDPKNESEII- 880
           R +AE AF N KC Q   L+ VW+       S+  + +  S   SRD N+  KN+   + 
Sbjct: 841 RSAAEKAFANAKCWQEHTLQLVWVTRQSNRESNNNNNNSNSLSVSRD-NLSSKNKCASVS 871

[Close]
BLAST of Cp4.1LG04g05420 vs. TAIR 10
Match: AT1G11650.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 50.4 bits (119), Expect = 8.4e-06
Identity = 28/80 (35.00%), Postives = 44/80 (55.00%), Query Frame = 0 

Query: 486 TLFVNGIPQQSNNTEALLSHFKKYGEVIDIYIPANSQRAFVQFSKREEAEAALKSPDAV- 545
           T+FV G+   S   + L + F +YGE++ + IPA  +  FVQFS++  AE AL+  + V 
Sbjct: 262 TVFVGGL-DASVTDDHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGVQ 321

Query: 546 MGNRFIKLWWANRDSIPDDG 565
           +G   ++L W    S    G
Sbjct: 322 LGGTTVRLSWGRSPSNKQSG 340

[Close]
BLAST of Cp4.1LG04g05420 vs. TAIR 10
Match: AT1G49600.1 (RNA-binding protein 47A )

HSP 1 Score: 48.9 bits (115), Expect = 2.4e-05
Identity = 29/89 (32.58%), Postives = 44/89 (49.44%), Query Frame = 0 

Query: 486 TLFVNGIPQQSNNTEALLSHFKKYGEVIDIYIPANSQRAFVQFSKREEAEAALKSPD-AV 545
           T+FV G+       E L+  F  +GEV+ + IP      FVQF+ R+ AE A+ + +  V
Sbjct: 328 TIFVGGLDADVTE-EDLMQPFSDFGEVVSVKIPVGKGCGFVQFANRQSAEEAIGNLNGTV 387

Query: 546 MGNRFIKLWWA---NRDSIPDDGVSSNNG 571
           +G   ++L W    N+    D G   N G
Sbjct: 388 IGKNTVRLSWGRSPNKQWRSDSGNQWNGG 415

[Close]
BLAST of Cp4.1LG04g05420 vs. TAIR 10
Match: AT4G27000.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 47.4 bits (111), Expect = 7.1e-05
Identity = 30/90 (33.33%), Postives = 47/90 (52.22%), Query Frame = 0 

Query: 486 TLFVNGIPQQSNNTEALLSHFKKYGEVIDIYIPANSQRAFVQFSKREEAEAALKSPDAV- 545
           T+FV G   QS   + L S F ++GE++ + IPA  +  FVQ++ R  AE AL   +   
Sbjct: 279 TIFV-GAVDQSVTEDDLKSVFGQFGELVHVKIPAGKRCGFVQYANRACAEQALSVLNGTQ 338

Query: 546 MGNRFIKLWW----ANRDSIPDDGVSSNNG 571
           +G + I+L W    +N+ + PD       G
Sbjct: 339 LGGQSIRLSWGRSPSNKQTQPDQAQYGGGG 367

The following BLAST results are available for this feature:
BLAST of Cp4.1LG04g05420 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LVX19.3e-15941.82Zinc finger CCCH domain-containing protein 41 OS=Arabidopsis thaliana OX=3702 GN... [more]
Q0JDM01.5e-13238.91Zinc finger CCCH domain-containing protein 27 OS=Oryza sativa subsp. japonica OX... [more]
Q6NZN09.4e-1023.40RNA-binding protein 26 OS=Mus musculus OX=10090 GN=Rbm26 PE=1 SV=2[more]
Q5T8P62.1e-0923.01RNA-binding protein 26 OS=Homo sapiens OX=9606 GN=RBM26 PE=1 SV=3[more]
Q2T9I51.3e-0622.06RNA-binding protein 26 OS=Xenopus laevis OX=8355 GN=rbm26 PE=2 SV=2[more]
BLAST of Cp4.1LG04g05420 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023529340.10.0100.00zinc finger CCCH domain-containing protein 41-like [Cucurbita pepo subsp. pepo][more]
XP_022928251.10.098.99zinc finger CCCH domain-containing protein 41-like [Cucurbita moschata] >KAG6588... [more]
KAG7022715.10.098.88Zinc finger CCCH domain-containing protein 41, partial [Cucurbita argyrosperma s... [more]
XP_022989082.10.097.53zinc finger CCCH domain-containing protein 41-like [Cucurbita maxima][more]
XP_038903817.10.080.93zinc finger CCCH domain-containing protein 41 [Benincasa hispida] >XP_038903818.... [more]
BLAST of Cp4.1LG04g05420 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1EJT50.098.99zinc finger CCCH domain-containing protein 41-like OS=Cucurbita moschata OX=3662... [more]
A0A6J1JET10.097.53zinc finger CCCH domain-containing protein 41-like OS=Cucurbita maxima OX=3661 G... [more]
A0A1S3B8B10.080.60zinc finger CCCH domain-containing protein 41 isoform X1 OS=Cucumis melo OX=3656... [more]
A0A6J1DF650.080.26zinc finger CCCH domain-containing protein 41 OS=Momordica charantia OX=3673 GN=... [more]
A0A5A7UCY70.080.60Zinc finger CCCH domain-containing protein 41 isoform X1 OS=Cucumis melo var. ma... [more]
BLAST of Cp4.1LG04g05420 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G27700.16.6e-16041.82zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing ... [more]
AT3G27700.26.6e-16041.82zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing ... [more]
AT1G11650.28.4e-0635.00RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT1G49600.12.4e-0532.58RNA-binding protein 47A [more]
AT4G27000.17.1e-0533.33RNA-binding (RRM/RBD/RNP motifs) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 625..666
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 827..848
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 449..473
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..72
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 441..473
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 395..429
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..81
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 863..891
NoneNo IPR availablePANTHERPTHR14398:SF0ZINC FINGER PROTEIN SWMcoord: 2..848
NoneNo IPR availableCDDcd12257RRM1_RBM26_likecoord: 484..555
e-value: 3.45916E-30
score: 111.87
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 486..553
e-value: 5.5E-9
score: 45.9
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 487..542
e-value: 2.1E-7
score: 30.7
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 485..557
score: 13.464272
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 225..251
e-value: 7.0E-5
score: 32.2
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 224..252
score: 13.084275
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 755..838
e-value: 1.6E-6
score: 29.6
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 423..561
e-value: 1.0E-13
score: 53.4
IPR045137RNA-binding protein 26/27PANTHERPTHR14398RNA RECOGNITION RRM/RNP DOMAINcoord: 2..848
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 484..820

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g05420.1Cp4.1LG04g05420.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding