Cp4.1LG04g05110 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG04g05110
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Auxin-responsive protein
Location	Cp4.1LG04: 6109489 .. 6109812 (-)
RNA-Seq Expression	Cp4.1LG04g05110
Synteny	Cp4.1LG04g05110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCATTCGAAAACCGGCGATTCACACGGCGGCGCTCAAGCAGATTGTGAAGCGCTGCTCCAGCCTAGGGCGGAAGCAAGAGGCCGCCGCCGCCGCCGCCGCCGCCGAGGCTGGATTTGACGATGTTCCCAAGGGACATTTCGCCGTCTACGTCGGCGAGAATCGGAGCCGATATGTCGTCCCGATTTCGCTCTTGACTCACCCCGATTTTCAATGCCTCCTCCGCCTTGCCGAGGAGGAATTCGGTTTCCACCACCACATGGGCCTCACTATCCCTTGTGAAGAGGTGGTTTTCCGCTCACTCACCGCCGCTCTCAAATGA

mRNA sequence

ATGGCCATTCGAAAACCGGCGATTCACACGGCGGCGCTCAAGCAGATTGTGAAGCGCTGCTCCAGCCTAGGGCGGAAGCAAGAGGCCGCCGCCGCCGCCGCCGCCGCCGAGGCTGGATTTGACGATGTTCCCAAGGGACATTTCGCCGTCTACGTCGGCGAGAATCGGAGCCGATATGTCGTCCCGATTTCGCTCTTGACTCACCCCGATTTTCAATGCCTCCTCCGCCTTGCCGAGGAGGAATTCGGTTTCCACCACCACATGGGCCTCACTATCCCTTGTGAAGAGGTGGTTTTCCGCTCACTCACCGCCGCTCTCAAATGA

Coding sequence (CDS)

ATGGCCATTCGAAAACCGGCGATTCACACGGCGGCGCTCAAGCAGATTGTGAAGCGCTGCTCCAGCCTAGGGCGGAAGCAAGAGGCCGCCGCCGCCGCCGCCGCCGCCGAGGCTGGATTTGACGATGTTCCCAAGGGACATTTCGCCGTCTACGTCGGCGAGAATCGGAGCCGATATGTCGTCCCGATTTCGCTCTTGACTCACCCCGATTTTCAATGCCTCCTCCGCCTTGCCGAGGAGGAATTCGGTTTCCACCACCACATGGGCCTCACTATCCCTTGTGAAGAGGTGGTTTTCCGCTCACTCACCGCCGCTCTCAAATGA

Protein sequence

MAIRKPAIHTAALKQIVKRCSSLGRKQEAAAAAAAAEAGFDDVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK

Homology

[Close]

BLAST of Cp4.1LG04g05110 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.8e-29
Identity = 69/116 (59.48%), Postives = 82/116 (70.69%), Query Frame = 0


Query: 1   MAIRKPA---IHTAALKQIVKRCSSLGRKQEAAAAAAAAEAGFD------DVPKGHFAVY 60
           MAI K       TA LKQI+KRCSSLG+K            G+D      DVPKGHF VY
Sbjct: 1   MAIMKKTSKLTQTAMLKQILKRCSSLGKKN---------GGGYDEDCLPLDVPKGHFPVY 60

Query: 61  VGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 108
           VGENRSRY+VPIS LTHP+FQ LL+ AEEEFGF H MGLTIPC+E+VF++LT+ ++
Sbjct: 61  VGENRSRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMIR 107

[Close]

BLAST of Cp4.1LG04g05110 vs. ExPASy Swiss-Prot
Match: Q9SL45 (Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR10 PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 7.2e-26
Identity = 65/112 (58.04%), Postives = 77/112 (68.75%), Query Frame = 0


Query: 1   MAIRKPAIHT----AALKQIVKRCSSLGRKQEAAAAAAAAEAGF-DDVPKGHFAVYVGEN 60
           MAI++ +  T    A++KQIVKRCSSL + +         E     DVPKGHF VYVG N
Sbjct: 1   MAIKRSSKATSSQAASIKQIVKRCSSLRKMKNVNGCYYNQEDDLPQDVPKGHFPVYVGPN 60

Query: 61  RSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 108
           RSRY+VPIS L H +FQ LLRLAEEEFGF H MGLTIPC+EV FRSL +  +
Sbjct: 61  RSRYIVPISWLHHSEFQTLLRLAEEEFGFDHDMGLTIPCDEVFFRSLISMFR 112

[Close]

BLAST of Cp4.1LG04g05110 vs. ExPASy Swiss-Prot
Match: P0DKL1 (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 2.9e-22
Identity = 55/101 (54.46%), Postives = 69/101 (68.32%), Query Frame = 0


Query: 3   IRKPAIHTAAL--KQIVKRCSSLGRKQEAAAAAAAAEAGFDDVPKGHFAVYVGENRSRYV 62
           IRK    T AL  K+I+K+CSS G+  + +          +DVPKGHF VYVGE R+RY+
Sbjct: 4   IRKSHKQTQALAIKKIIKKCSSFGKNNDDSGLP-------NDVPKGHFVVYVGERRNRYI 63

Query: 63  VPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRS 102
           VPIS L HP FQ LL+ +EEEFGF+H MG+ IPC+EV F S
Sbjct: 64  VPISCLDHPTFQDLLQRSEEEFGFNHDMGIIIPCQEVDFLS 97

[Close]

BLAST of Cp4.1LG04g05110 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.0e-15
Identity = 39/66 (59.09%), Postives = 47/66 (71.21%), Query Frame = 0


Query: 42  DVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHM-GLTIPCEEVVFR 101
           D PKG+ AVYVGE   R+V+P+S L  P FQ LL  AEEEFG+ H M GLTIPC E VF+
Sbjct: 16  DAPKGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQ 75

Query: 102 SLTAAL 107
            +T+ L
Sbjct: 76  CITSCL 81

[Close]

BLAST of Cp4.1LG04g05110 vs. ExPASy Swiss-Prot
Match: P33082 (Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.6e-15
Identity = 38/66 (57.58%), Postives = 46/66 (69.70%), Query Frame = 0


Query: 42  DVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHM-GLTIPCEEVVFR 101
           D PKG+ AVYVGE   R+V+P+S +  P FQ LL  AEEEFG+ H M GLTIPC E VF+
Sbjct: 16  DAPKGYLAVYVGEKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPCSEEVFQ 75

Query: 102 SLTAAL 107
            +T  L
Sbjct: 76  RITCCL 81

[Close]

BLAST of Cp4.1LG04g05110 vs. NCBI nr
Match: XP_023529815.1 (auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 214 bits (546), Expect = 1.12e-69
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0


Query: 1   MAIRKPAIHTAALKQIVKRCSSLGRKQEAAAAAAAAEAGFDDVPKGHFAVYVGENRSRYV 60
           MAIRKPAIHTAALKQIVKRCSSLGRKQEAAAAAAAAEAGFDDVPKGHFAVYVGENRSRYV
Sbjct: 34  MAIRKPAIHTAALKQIVKRCSSLGRKQEAAAAAAAAEAGFDDVPKGHFAVYVGENRSRYV 93

Query: 61  VPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 107
           VPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
Sbjct: 94  VPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 140

[Close]

BLAST of Cp4.1LG04g05110 vs. NCBI nr
Match: XP_022989149.1 (auxin-responsive protein SAUR50-like [Cucurbita maxima])

HSP 1 Score: 203 bits (517), Expect = 9.84e-66
Identity = 103/107 (96.26%), Postives = 103/107 (96.26%), Query Frame = 0


Query: 1   MAIRKPAIHTAALKQIVKRCSSLGRKQEAAAAAAAAEAGFDDVPKGHFAVYVGENRSRYV 60
           MAIRKPAIHTAALKQIVKRCSSLGRKQEAA AA A  AGFDDVPKGHFAVYVGENRSRYV
Sbjct: 1   MAIRKPAIHTAALKQIVKRCSSLGRKQEAAVAATAT-AGFDDVPKGHFAVYVGENRSRYV 60

Query: 61  VPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 107
           VPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
Sbjct: 61  VPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 106

[Close]

BLAST of Cp4.1LG04g05110 vs. NCBI nr
Match: KAG6588978.1 (Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 200 bits (509), Expect = 1.40e-64
Identity = 101/107 (94.39%), Postives = 101/107 (94.39%), Query Frame = 0


Query: 1   MAIRKPAIHTAALKQIVKRCSSLGRKQEAAAAAAAAEAGFDDVPKGHFAVYVGENRSRYV 60
           MAIRKPAIHTAALKQIVKRCSSLGRKQEAAAA      GFDDVPKGHFAVYVGENRSRYV
Sbjct: 1   MAIRKPAIHTAALKQIVKRCSSLGRKQEAAAA------GFDDVPKGHFAVYVGENRSRYV 60

Query: 61  VPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 107
           VPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
Sbjct: 61  VPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 101

[Close]

BLAST of Cp4.1LG04g05110 vs. NCBI nr
Match: XP_022928516.1 (auxin-responsive protein SAUR50-like [Cucurbita moschata])

HSP 1 Score: 199 bits (505), Expect = 1.64e-63
Identity = 100/107 (93.46%), Postives = 101/107 (94.39%), Query Frame = 0


Query: 1   MAIRKPAIHTAALKQIVKRCSSLGRKQEAAAAAAAAEAGFDDVPKGHFAVYVGENRSRYV 60
           MAIRKPAIHTAALKQIVKRCSSLGRKQEAAAA      GFDDVPKGHFAVYVGENRSRYV
Sbjct: 34  MAIRKPAIHTAALKQIVKRCSSLGRKQEAAAA------GFDDVPKGHFAVYVGENRSRYV 93

Query: 61  VPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 107
           VPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAAL+
Sbjct: 94  VPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALQ 134

[Close]

BLAST of Cp4.1LG04g05110 vs. NCBI nr
Match: XP_038887253.1 (auxin-responsive protein SAUR50-like [Benincasa hispida])

HSP 1 Score: 178 bits (451), Expect = 9.52e-56
Identity = 93/107 (86.92%), Postives = 95/107 (88.79%), Query Frame = 0


Query: 1   MAIRKPAIHTAALKQIVKRCSSLGRKQEAAAAAAAAEAGFDDVPKGHFAVYVGENRSRYV 60
           MAI KPA     LKQIVKRCSSLGRKQ+A AAAA A   +D VPKGHFAVYVGENRSRYV
Sbjct: 1   MAIPKPAT----LKQIVKRCSSLGRKQDATAAAAPA---YDGVPKGHFAVYVGENRSRYV 60

Query: 61  VPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 107
           VPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
Sbjct: 61  VPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 100

[Close]

BLAST of Cp4.1LG04g05110 vs. ExPASy TrEMBL
Match: A0A6J1JNJ6 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111486307 PE=3 SV=1)

HSP 1 Score: 203 bits (517), Expect = 4.77e-66
Identity = 103/107 (96.26%), Postives = 103/107 (96.26%), Query Frame = 0


Query: 1   MAIRKPAIHTAALKQIVKRCSSLGRKQEAAAAAAAAEAGFDDVPKGHFAVYVGENRSRYV 60
           MAIRKPAIHTAALKQIVKRCSSLGRKQEAA AA A  AGFDDVPKGHFAVYVGENRSRYV
Sbjct: 1   MAIRKPAIHTAALKQIVKRCSSLGRKQEAAVAATAT-AGFDDVPKGHFAVYVGENRSRYV 60

Query: 61  VPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 107
           VPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
Sbjct: 61  VPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 106

[Close]

BLAST of Cp4.1LG04g05110 vs. ExPASy TrEMBL
Match: A0A6J1EKI0 (auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC111435304 PE=3 SV=1)

HSP 1 Score: 199 bits (505), Expect = 7.96e-64
Identity = 100/107 (93.46%), Postives = 101/107 (94.39%), Query Frame = 0


Query: 1   MAIRKPAIHTAALKQIVKRCSSLGRKQEAAAAAAAAEAGFDDVPKGHFAVYVGENRSRYV 60
           MAIRKPAIHTAALKQIVKRCSSLGRKQEAAAA      GFDDVPKGHFAVYVGENRSRYV
Sbjct: 34  MAIRKPAIHTAALKQIVKRCSSLGRKQEAAAA------GFDDVPKGHFAVYVGENRSRYV 93

Query: 61  VPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 107
           VPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAAL+
Sbjct: 94  VPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALQ 134

[Close]

BLAST of Cp4.1LG04g05110 vs. ExPASy TrEMBL
Match: A0A6J1GME7 (auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC111455291 PE=3 SV=1)

HSP 1 Score: 174 bits (442), Expect = 1.05e-54
Identity = 91/107 (85.05%), Postives = 93/107 (86.92%), Query Frame = 0


Query: 1   MAIRKPAIHTAALKQIVKRCSSLGRKQEAAAAAAAAEAGFDDVPKGHFAVYVGENRSRYV 60
           M I KPA    ALK IVKRCSSLGRKQ+AAA A A    +D VPKGHFAVYVGENRSRYV
Sbjct: 1   MPIPKPA----ALKHIVKRCSSLGRKQDAAATATA----YDGVPKGHFAVYVGENRSRYV 60

Query: 61  VPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 107
           VPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
Sbjct: 61  VPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 99

[Close]

BLAST of Cp4.1LG04g05110 vs. ExPASy TrEMBL
Match: A0A6J1I2G2 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111468411 PE=3 SV=1)

HSP 1 Score: 172 bits (435), Expect = 1.23e-53
Identity = 89/107 (83.18%), Postives = 92/107 (85.98%), Query Frame = 0


Query: 1   MAIRKPAIHTAALKQIVKRCSSLGRKQEAAAAAAAAEAGFDDVPKGHFAVYVGENRSRYV 60
           M I KPA    ALK IVKRCSSLGRKQ+A A A A    +D VPKGHFAVYVG+NRSRYV
Sbjct: 1   MPIPKPA----ALKHIVKRCSSLGRKQDATATATA----YDGVPKGHFAVYVGQNRSRYV 60

Query: 61  VPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 107
           VPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
Sbjct: 61  VPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 99

[Close]

BLAST of Cp4.1LG04g05110 vs. ExPASy TrEMBL
Match: A0A0A0K5S8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G008430 PE=3 SV=1)

HSP 1 Score: 167 bits (422), Expect = 1.18e-51
Identity = 87/107 (81.31%), Postives = 90/107 (84.11%), Query Frame = 0


Query: 1   MAIRKPAIHTAALKQIVKRCSSLGRKQEAAAAAAAAEAGFDDVPKGHFAVYVGENRSRYV 60
           MAI KP     ALKQIVKRCSSLGRKQ+  A   A    +D VPKGHFAVYVG+NRSRYV
Sbjct: 1   MAIPKPT----ALKQIVKRCSSLGRKQDPTATPPA----YDGVPKGHFAVYVGQNRSRYV 60

Query: 61  VPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 107
           VPISLLTHPDFQCLLRLAEEEFGF HHMGLTIPCEEVVFRSLTAALK
Sbjct: 61  VPISLLTHPDFQCLLRLAEEEFGFRHHMGLTIPCEEVVFRSLTAALK 99

[Close]

BLAST of Cp4.1LG04g05110 vs. TAIR 10
Match: AT4G34760.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 129.8 bits (325), Expect = 1.3e-30
Identity = 69/116 (59.48%), Postives = 82/116 (70.69%), Query Frame = 0


Query: 1   MAIRKPA---IHTAALKQIVKRCSSLGRKQEAAAAAAAAEAGFD------DVPKGHFAVY 60
           MAI K       TA LKQI+KRCSSLG+K            G+D      DVPKGHF VY
Sbjct: 1   MAIMKKTSKLTQTAMLKQILKRCSSLGKKN---------GGGYDEDCLPLDVPKGHFPVY 60

Query: 61  VGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 108
           VGENRSRY+VPIS LTHP+FQ LL+ AEEEFGF H MGLTIPC+E+VF++LT+ ++
Sbjct: 61  VGENRSRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMIR 107

[Close]

BLAST of Cp4.1LG04g05110 vs. TAIR 10
Match: AT1G75580.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 127.5 bits (319), Expect = 6.5e-30
Identity = 69/109 (63.30%), Postives = 80/109 (73.39%), Query Frame = 0


Query: 1   MAIRK--PAIHTAALKQIVKRCSSLGRKQEAAAAAAAAEAGFDDVPKGHFAVYVGENRSR 60
           MA++K      TA +KQI+KRCSSLG+KQ          +   +VPKGHF VYVGENR R
Sbjct: 1   MAMKKANKLTQTAMIKQILKRCSSLGKKQSNVYGEDENGSPL-NVPKGHFVVYVGENRVR 60

Query: 61  YVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 108
           YVVPIS LT P+FQ LL+ AEEEFGF H MGLTIPCEEVVFRSLT+ L+
Sbjct: 61  YVVPISFLTRPEFQLLLQQAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 108

[Close]

BLAST of Cp4.1LG04g05110 vs. TAIR 10
Match: AT4G36110.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 127.5 bits (319), Expect = 6.5e-30
Identity = 67/111 (60.36%), Postives = 80/111 (72.07%), Query Frame = 0


Query: 1   MAIRK----PAIHTAALKQIVKRCSSLGRKQEAAAAAAAAEAGFDDVPKGHFAVYVGENR 60
           MAI+K         A+LKQI+KRCSSLG+K +           F+DVPKGHF VYVG++R
Sbjct: 1   MAIKKSNKAALSQAASLKQILKRCSSLGKKNQ-------GNCYFNDVPKGHFPVYVGQHR 60

Query: 61  SRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK 108
           SRYVVPIS L H +FQ LL+LAEEEFGF H MGLTIPC+EVVFRSL +  +
Sbjct: 61  SRYVVPISWLDHHEFQSLLQLAEEEFGFEHEMGLTIPCDEVVFRSLISMFR 104

[Close]

BLAST of Cp4.1LG04g05110 vs. TAIR 10
Match: AT2G21220.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 126.7 bits (317), Expect = 1.1e-29
Identity = 68/109 (62.39%), Postives = 80/109 (73.39%), Query Frame = 0


Query: 1   MAIRKPA--IHTAALKQIVKRCSSLGRKQEAAAAAAAAEAGFD-DVPKGHFAVYVGENRS 60
           MA+++ +    TA LKQI+KRCSSL + Q         E G   DVPKGHF VYVGE RS
Sbjct: 1   MAVKRSSKLTQTAMLKQILKRCSSLAKNQ------CYDEDGLPVDVPKGHFPVYVGEKRS 60

Query: 61  RYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAAL 107
           RY+VPIS LTHP F+ LL+ AEEEFGF+H MGLTIPCEEVVFRSLT+ +
Sbjct: 61  RYIVPISFLTHPKFKSLLQQAEEEFGFNHDMGLTIPCEEVVFRSLTSMI 103

[Close]

BLAST of Cp4.1LG04g05110 vs. TAIR 10
Match: AT4G38860.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 123.2 bits (308), Expect = 1.2e-28
Identity = 68/111 (61.26%), Postives = 81/111 (72.97%), Query Frame = 0


Query: 1   MAIRKPA--IHTAALKQIVKRCSSLGRKQEAAAAAAAAEAGFD-DVPKGHFAVYVGENRS 60
           MA+++ +    TA LKQI+KRCSSLG+KQ         E G   DVPKGHF VYVGE R+
Sbjct: 1   MAVKRSSKLTQTAMLKQILKRCSSLGKKQ------CYDEEGLPLDVPKGHFPVYVGEKRT 60

Query: 61  RYVVPISLLTHPDFQCLLRLAEEEFGFHHHM-GLTIPCEEVVFRSLTAALK 108
           RY+VPIS LTHP+F  LL+ AEEEFGF H M GLTIPCEEVVF SLT+ ++
Sbjct: 61  RYIVPISFLTHPEFLILLQQAEEEFGFRHDMGGLTIPCEEVVFLSLTSMIR 105

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g05110 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65695	1.8e-29	59.48	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S...	[more]
Q9SL45	7.2e-26	58.04	Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR1...	[more]
P0DKL1	2.9e-22	54.46	Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1	[more]
P33081	2.0e-15	59.09	Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1	[more]
P33082	2.6e-15	57.58	Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of Cp4.1LG04g05110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023529815.1	1.12e-69	100.00	auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo]	[more]
XP_022989149.1	9.84e-66	96.26	auxin-responsive protein SAUR50-like [Cucurbita maxima]	[more]
KAG6588978.1	1.40e-64	94.39	Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022928516.1	1.64e-63	93.46	auxin-responsive protein SAUR50-like [Cucurbita moschata]	[more]
XP_038887253.1	9.52e-56	86.92	auxin-responsive protein SAUR50-like [Benincasa hispida]	[more]

BLAST of Cp4.1LG04g05110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JNJ6	4.77e-66	96.26	auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111486307...	[more]
A0A6J1EKI0	7.96e-64	93.46	auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC1114353...	[more]
A0A6J1GME7	1.05e-54	85.05	auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC1114552...	[more]
A0A6J1I2G2	1.23e-53	83.18	auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111468411...	[more]
A0A0A0K5S8	1.18e-51	81.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G008430 PE=3 SV=1	[more]

BLAST of Cp4.1LG04g05110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34760.1	1.3e-30	59.48	SAUR-like auxin-responsive protein family	[more]
AT1G75580.1	6.5e-30	63.30	SAUR-like auxin-responsive protein family	[more]
AT4G36110.1	6.5e-30	60.36	SAUR-like auxin-responsive protein family	[more]
AT2G21220.1	1.1e-29	62.39	SAUR-like auxin-responsive protein family	[more]
AT4G38860.1	1.2e-28	61.26	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 14..105 e-value: 2.9E-28 score: 97.9
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 8..107
None	No IPR available	PANTHER	PTHR31374:SF325	AUXIN-INDUCED PROTEIN 15A-LIKE	coord: 8..107

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g05110.1	Cp4.1LG04g05110.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin