Cp4.1LG04g03780 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG04g03780
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	chromatin remodeling protein EBS-like
Location	Cp4.1LG04: 7058959 .. 7062769 (+)
RNA-Seq Expression	Cp4.1LG04g03780
Synteny	Cp4.1LG04g03780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATGCCGCATCCCAACAAAATCCCCATTTCCCATTTTCTCCCTCTTCTCCTTCTTCGTCCTTCTTTCTCTCTCTTCAGTCTTCACCTTCTACGTTTAGGGTTTCTGGGTGTGGAACTCAGTCCACAGTGTTCTTAATTTTCTCGATTTGCGCTCAATAATCTCAATCCATGAGAGAAATCTAATCTCGTTTCAACTCGCATTCTCCTTCCGAGTCTGCTTTGCTCTGTTTTCTTTCTCAATCTCGTAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTAATCTTCTGTAGCGTTGCGACTCGAACAGTATCTTAGATTATTAGCGGGGTTAATTCATGGCCAAGACTAAACCAGGGAAGAAAGATCTTGATTCATACACCATCAAAGGCACCAACAAAATTGTTCGACGTATTGTCTCTTTGGGAACAAACATGATTTTTGTTCTTCCTCTTGTTCTTTGTCTTCTTCTTTTGTTTTTGTGTTCAAAGCGACACTTAATTGGTTTGCATTTTCTGCAATTGCTTTTGGTTGCTTCTGGTGAGTGTTCATTGATTTTTGGAATTGCATTTCTGTGGTTGTTGCAGCTGGTGATTGTGTGTTAATGAGACCGTCCGACTCCGACAAGCCTCCATACGTTGCTCGTGTTGAGAAAATTGAAGCTGATCATCGCAACAATGTGAAGGTTCGGGTTCGGTGGTATTATCGGCCGGAAGAATCAATTGGAGGACGAAGGCAGTTCCATGGTGCTAAAGAGCTTTTTCTCTCGGACCATTTTGATGTTCAGAGTGCTCACACTATAGAGGGAAAATGCACGGTGCACTCTTTTAAAAATTATACCAAACTTGATAATGTTGGTGCAGAGGACTACTTTTGCAGATTCGAGTACAAGGCTGCCACTGGCGGTTTCACACCAGACCGTGTAGCTGTGTGAGTTCTATGGTGTACCTTGTTCCTTACATGTTTCTACTAGCAATCTCATGTTGGTAATTATATAAGAAAATTTGTGGTTTATCTGTGTTTTGGGTTCTTTTTTTTAATTGCAGGTATTGTAAATGTGAGATGCCATACAACCCAGATGACCTTATGGTTCAGTGTGAGGGATGCAAAGATTGGTAATCTCAACCTACTTTTGCAGCTATGTGCTTTGTTTCCTGCAAATTTAGAGAGGATAATCTGATGCTTGCTTGTTTTATAACTTCGTTATGTAGCTTTTGTTTGGAGATAGTGTCGTGTCGTTCGCCTGTTGCAGGCTATTATATGTCGGTTTTTCTTGGAATTTTAAAGATAGGCACTCTGTTCAATAACTTGTTGTGCCATTGTTAGGGTGATGCACCAAAATGTGAACAAGAATGTGGAGATGAAAAGCCTTGTTTTTTCGTCCTCTCTAAACTAACATATATGTTTTGCAGGTTTCATCCATCATGCATGGGAATGACCATTGACGAAGCAAAGAAGTTGGATAACTTTTTGTGTTCAGATTGTTCCTCAGAAAATGATGCGAAAAGGTCCTCGAATGCATTTCCAGTATCACCTTCTGCTGAGGCTAAGGTAAGGGATGTTGATTCATCTTTACATGTGAGCAATACTGCTAAAATCGTATGACTTATGATAAAATGTAGAGGAGCTGTACATCATTTGGATTTTATGGCAGAATTACTTGAGAACATTATGTGCCTCTTCTGGTGAAACCATTAGAAATTCAATAACTGGTAGCAAAGTGATGATGTTGGCAAGAAATGCCAATAAAAGAAATCTAACATTTTATGCTTTCACTAAATTTTATTATCATGGAGATTTTTTGTGTAGACTACTGAATTCTCGTTATGTGCTGGGCTGAAGTTTGAAGTCCTATTAGGGTAATTCTTGTACGCATTCTGTGAGATCCCACATCGGTTGGAGAGAAGCATTCTTTTAAGGATGCGGAAACCTACCCCTAGTAGATGCGTTTTAAAAACTTTGAGGGGAGCCTGAAAAGGAAAACTCAAAGAGGACAATATTTGTTAGTGGTGGGCTTGGGCCGTTACACATTCTATGAAACTTGCTCCGTGAAACTCGTTGCATAATATAGGTCTTGAACACAATTTGGTTTAGGTTGATTGATAACTTCATTTTAGTCGGTACTCCTTTGTCTCTAACTGGATAGTGGTACTGTATTTATGTTTATTTGGTTAGGTTGCAATCAATAAAATATGTAATGACACATAATTGAAGTTGAATAATTGATGTGCACTAGAAGGCACATTCAAACCTTTTGTTTTGCCTAGGAATACTCTTCCCTCCCGGACTTCCCTTTGTGCACGAGTAGTTCACATTTGGTGCTACATTTTCTTCTTGACGACTTTGGTTGTATTGGAGCTCTAAAGTTTGTCGTTTTTAAGCAACTCGGAGTCGACTATTGGAGCTCTAAAGTTACCATGTTGTTTTAAGTTTTTAAGCAACTCTTGACGACTTTGTTTTAAGTTTCTCTGAGTCGACTATTGGAACTCTGAGTCGGCTCTGAATTGAACATAGTGTAGTATTAGTGAACAACTGATTTGGGACAAGCCCCAATGTTTGTGTAAAAGGGTCAGAGGCAGTGTAACACACTGAATTTCTGTCTCGTGCTCTCTGGTTTTTATTTATTTTGAAAGGATTTAGGCAATGAAACAGAAATATGGATTCTCATGTTGAATTCTCATGCTAGGTGGAACCAAAGCGTCGGAAGAGATGATTGGCTGATGAAGGTTCATGGAAGTGACAAGGAGGTGCGATTTCCTGCGCCTTTAGTTTCTGTTAATGTTGATGTTGTGGAAATGTACAGTGAAGATAAGATATTGTGCTCGCACAAACCAGAGGTTCTTTTTTTTAAAACTACAATGTTCAAATACATTTACGTGTGCTAAACCAGCGGGGCAATACTGTGATCTGTGTTTGTAGTCGTGGCTGCACGATGCGAAAAACTGCGGTTAATTTATTTAAGTGCTTAACTTTGAGAAACATTTGCACGGAAGTAGAAAGACGTAGGACAGAAAGTGTCTGGATTTGTTGTAATTTGCTTAGTTCTGGCTTTTCTTCAGAGTATATTGAACTGTTCCAAGCTCCCCTTCATTATTATTTTTTCTAGTTTCGCCTTTTTGGTGAAGAGAAAGGACAATGATGGGTTGTTTGGAGCGAGCTCGGTCTAGCAGTGGCATCTTTTTACAGCCGCATCCATGAAAGAATGTTAGATTGCTGCTATGCTTCTTATATTGCAGGTGGTGCTTGGATCTTGAAGCCAGAAGAGTATGGAGGTTGGTTGGTTCGTCCATGGCAGCTATAAAGTGTTGCTAACTTTGTGATTTGTGTTTGGACAATGCACAAAAGCTTGCTCCTTCCTTCTGATCTGATCACATTGTTCCTCTTCTAGATAAGATTGGCCATGGTCATGAAGCATTTTCTAGGTAAAATGGTGCACTGGACAGATTTGATTATGTTGTTGACTTCCATTTCCAGGCAATGCAGCCGTTATATAGCCGCCATTGAGCTCTGAAATTCCTCACCAACTTTGATAGCACATTCTCATTCTCTATTTATGATCTCTCATCCCCAATTCTCACCATCCAAAGAAACTTGGTGAATATTCGAGTAAGAACATGAATTTAATTCGTTCTTCTATGGGTAAATTTTATATATACATTCATGTGCCTTTTATCTGTGTCCACGTTCTCTTTCTATTACTGATCTACTGGTAAACTCGAGACGACCCTTATCATCGGAATTAAGAAAAATGGTCGAAACTACCACA

mRNA sequence

CATGCCGCATCCCAACAAAATCCCCATTTCCCATTTTCTCCCTCTTCTCCTTCTTCGTCCTTCTTTCTCTCTCTTCAGTCTTCACCTTCTACGTTTAGGGTTTCTGGGTGTGGAACTCAGTCCACAGTGTTCTTAATTTTCTCGATTTGCGCTCAATAATCTCAATCCATGAGAGAAATCTAATCTCGTTTCAACTCGCATTCTCCTTCCGAGTCTGCTTTGCTCTGTTTTCTTTCTCAATCTCGTAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTAATCTTCTGTAGCGTTGCGACTCGAACAGTATCTTAGATTATTAGCGGGGTTAATTCATGGCCAAGACTAAACCAGGGAAGAAAGATCTTGATTCATACACCATCAAAGGCACCAACAAAATTGTTCGACCTGGTGATTGTGTGTTAATGAGACCGTCCGACTCCGACAAGCCTCCATACGTTGCTCGTGTTGAGAAAATTGAAGCTGATCATCGCAACAATGTGAAGGTTCGGGTTCGGTGGTATTATCGGCCGGAAGAATCAATTGGAGGACGAAGGCAGTTCCATGGTGCTAAAGAGCTTTTTCTCTCGGACCATTTTGATGTTCAGAGTGCTCACACTATAGAGGGAAAATGCACGGTGCACTCTTTTAAAAATTATACCAAACTTGATAATGTTGGTGCAGAGGACTACTTTTGCAGATTCGAGTACAAGGCTGCCACTGGCGGTTTCACACCAGACCGTGTAGCTGTGTATTGTAAATGTGAGATGCCATACAACCCAGATGACCTTATGGTTCAGTGTGAGGGATGCAAAGATTGGTTTCATCCATCATGCATGGGAATGACCATTGACGAAGCAAAGAAGTTGGATAACTTTTTGTGTTCAGATTGTTCCTCAGAAAATGATGCGAAAAGGTCCTCGAATGCATTTCCAGTATCACCTTCTGCTGAGGCTAAGGAATACTCTTCCCTCCCGGACTTCCCTTTGTGCACGAGTAGTTCACATTTGGTGCTACATTTTCTTCTTGACGACTTTGGTTGTATTGGAGCTCTAAAGTGGAACCAAAGCGTCGGAAGAGATGATTGGCTGATGAAGGTTCATGGAAGTGACAAGGAGGTGCGATTTCCTGCGCCTTTAGTTTCTGTTAATGTTGATGTTGTGGAAATGTACAGTGAAGATAAGATATTGTGCTCGCACAAACCAGAGTCGTGGCTGCACGATGCGAAAAACTGCGGTGGTGCTTGGATCTTGAAGCCAGAAGAGTATGGAGGTTGGTTGATAAGATTGGCCATGGTCATGAAGCATTTTCTAGGTAAAATGGTGCACTGGACAGATTTGATTATGTTGTTGACTTCCATTTCCAGGCAATGCAGCCGTTATATAGCCGCCATTGAGCTCTGAAATTCCTCACCAACTTTGATAGCACATTCTCATTCTCTATTTATGATCTCTCATCCCCAATTCTCACCATCCAAAGAAACTTGGTGAATATTCGAGTAAGAACATGAATTTAATTCGTTCTTCTATGGGTAAATTTTATATATACATTCATGTGCCTTTTATCTGTGTCCACGTTCTCTTTCTATTACTGATCTACTGGTAAACTCGAGACGACCCTTATCATCGGAATTAAGAAAAATGGTCGAAACTACCACA

Coding sequence (CDS)

ATGGCCAAGACTAAACCAGGGAAGAAAGATCTTGATTCATACACCATCAAAGGCACCAACAAAATTGTTCGACCTGGTGATTGTGTGTTAATGAGACCGTCCGACTCCGACAAGCCTCCATACGTTGCTCGTGTTGAGAAAATTGAAGCTGATCATCGCAACAATGTGAAGGTTCGGGTTCGGTGGTATTATCGGCCGGAAGAATCAATTGGAGGACGAAGGCAGTTCCATGGTGCTAAAGAGCTTTTTCTCTCGGACCATTTTGATGTTCAGAGTGCTCACACTATAGAGGGAAAATGCACGGTGCACTCTTTTAAAAATTATACCAAACTTGATAATGTTGGTGCAGAGGACTACTTTTGCAGATTCGAGTACAAGGCTGCCACTGGCGGTTTCACACCAGACCGTGTAGCTGTGTATTGTAAATGTGAGATGCCATACAACCCAGATGACCTTATGGTTCAGTGTGAGGGATGCAAAGATTGGTTTCATCCATCATGCATGGGAATGACCATTGACGAAGCAAAGAAGTTGGATAACTTTTTGTGTTCAGATTGTTCCTCAGAAAATGATGCGAAAAGGTCCTCGAATGCATTTCCAGTATCACCTTCTGCTGAGGCTAAGGAATACTCTTCCCTCCCGGACTTCCCTTTGTGCACGAGTAGTTCACATTTGGTGCTACATTTTCTTCTTGACGACTTTGGTTGTATTGGAGCTCTAAAGTGGAACCAAAGCGTCGGAAGAGATGATTGGCTGATGAAGGTTCATGGAAGTGACAAGGAGGTGCGATTTCCTGCGCCTTTAGTTTCTGTTAATGTTGATGTTGTGGAAATGTACAGTGAAGATAAGATATTGTGCTCGCACAAACCAGAGTCGTGGCTGCACGATGCGAAAAACTGCGGTGGTGCTTGGATCTTGAAGCCAGAAGAGTATGGAGGTTGGTTGATAAGATTGGCCATGGTCATGAAGCATTTTCTAGGTAAAATGGTGCACTGGACAGATTTGATTATGTTGTTGACTTCCATTTCCAGGCAATGCAGCCGTTATATAGCCGCCATTGAGCTCTGA

Protein sequence

MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHFDVQSAHTIEGKCTVHSFKNYTKLDNVGAEDYFCRFEYKAATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIDEAKKLDNFLCSDCSSENDAKRSSNAFPVSPSAEAKEYSSLPDFPLCTSSSHLVLHFLLDDFGCIGALKWNQSVGRDDWLMKVHGSDKEVRFPAPLVSVNVDVVEMYSEDKILCSHKPESWLHDAKNCGGAWILKPEEYGGWLIRLAMVMKHFLGKMVHWTDLIMLLTSISRQCSRYIAAIEL

Homology

[Close]

BLAST of Cp4.1LG04g03780 vs. ExPASy Swiss-Prot
Match: F4JL28 (Chromatin remodeling protein EBS OS=Arabidopsis thaliana OX=3702 GN=EBS PE=1 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 4.9e-103
Identity = 170/212 (80.19%), Postives = 193/212 (91.04%), Query Frame = 0


Query: 2   AKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVR 61
           +K K G+K+LDSYTIKGTNK+VR GDCVLMRPSD+ KPPYVARVEKIEAD RNNVKV  R
Sbjct: 10  SKIKTGRKELDSYTIKGTNKVVRAGDCVLMRPSDAGKPPYVARVEKIEADARNNVKVHCR 69

Query: 62  WYYRPEESIGGRRQFHGAKELFLSDHFDVQSAHTIEGKCTVHSFKNYTKLDNVGAEDYFC 121
           WYYRPEES+GGRRQFHGAKELFLSDHFDVQSAHTIEGKC VH+FKNYT+L+NVGAEDY+C
Sbjct: 70  WYYRPEESLGGRRQFHGAKELFLSDHFDVQSAHTIEGKCIVHTFKNYTRLENVGAEDYYC 129

Query: 122 RFEYKAATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIDEAKKLDNF 181
           RFEYKAATG FTPDRVAVYCKCEMPYNPDDLMVQCEGCKDW+HP+C+GMTI+EAKKLD+F
Sbjct: 130 RFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDHF 189

Query: 182 LCSDCSSENDAKRSSNAFPVSPSAEAKEYSSL 214
           +C++CSS++D K+S N F  SP+ + K   SL
Sbjct: 190 VCAECSSDDDVKKSQNGFTSSPADDVKVRLSL 221

[Close]

BLAST of Cp4.1LG04g03780 vs. ExPASy Swiss-Prot
Match: Q9FEN9 (Chromatin remodeling protein SHL OS=Arabidopsis thaliana OX=3702 GN=SHL PE=1 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 2.7e-77
Identity = 138/214 (64.49%), Postives = 161/214 (75.23%), Query Frame = 0


Query: 1   MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHR-NNVKVR 60
           M K K  +K L SY +K  NK ++ GD VLMR S+  KP YVARVE IE D R ++ KVR
Sbjct: 1   MPKQKAPRKQLKSYKLKHINKSIQEGDAVLMRSSEPGKPSYVARVEAIETDARGSHAKVR 60

Query: 61  VRWYYRPEESIGGRRQFHGAKELFLSDHFDVQSAHTIEGKCTVHSFKNYTKLDNVGAEDY 120
           VRWYYRPEESIGGRRQFHGAKE+FLSDHFD QSA TIEGKC VHSF +YTKLD+VG +D+
Sbjct: 61  VRWYYRPEESIGGRRQFHGAKEVFLSDHFDFQSADTIEGKCKVHSFSSYTKLDSVGNDDF 120

Query: 121 FCRFEYKAATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIDEAKKLD 180
           FCRFEY + TG F PDRV V+CKCEMPYNPDDLMVQCE C +WFHPSC+G TI+EAKK D
Sbjct: 121 FCRFEYNSTTGAFDPDRVTVFCKCEMPYNPDDLMVQCEECSEWFHPSCIGTTIEEAKKPD 180

Query: 181 NFLCSDCSSENDAKRSSNAFPVSPSAEAKEYSSL 214
           NF C +CS +     +SN+   +  A+     SL
Sbjct: 181 NFYCEECSPQQQNLHNSNSTSNNRDAKVNGKRSL 214

[Close]

BLAST of Cp4.1LG04g03780 vs. ExPASy Swiss-Prot
Match: F4JGB7 (Chromatin remodeling protein At4g04260 OS=Arabidopsis thaliana OX=3702 GN=At4g04260 PE=3 SV=2)

HSP 1 Score: 268.1 bits (684), Expect = 1.4e-70
Identity = 140/215 (65.12%), Postives = 161/215 (74.88%), Query Frame = 0


Query: 2   AKTKPGKKDLD--SYTIKGTNKIVR-----PGDCVLMRPSDSDKPPYVARVEKIEADHRN 61
           +K K GKKD+      I   N IV       GDCVLMRPSD+ K PYVARVEKIEAD RN
Sbjct: 12  SKIKLGKKDIKILGREILLGNVIVEVGFFTVGDCVLMRPSDAGKAPYVARVEKIEADARN 71

Query: 62  NVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHFDVQSAHTIEGKCTVHSFKNYTKLDNV 121
           NVKV  RWYY PEES GGRRQ HGAKELFLSDHFDVQSAHTIEGKC VH+FKNYT+L+NV
Sbjct: 72  NVKVHCRWYYCPEESHGGRRQLHGAKELFLSDHFDVQSAHTIEGKCIVHTFKNYTRLENV 131

Query: 122 GAEDYFCRFEYKAATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIDE 181
           G EDY+C F+YKAATG FTPDRVAVY KCEMPYN D+LM +   C    H +C+G+TI+E
Sbjct: 132 GVEDYYCIFDYKAATGAFTPDRVAVYYKCEMPYNSDELM-ELLLCHYRVHLACVGVTIEE 191

Query: 182 AKKLDNFLCSDCSSEND-AKRSSNAFPVSPSAEAK 209
           AKKL++F+C +CSS+ D  KR  N F  S + + K
Sbjct: 192 AKKLEHFVCVECSSDEDGVKRFQNGFASSTTNDLK 225

[Close]

BLAST of Cp4.1LG04g03780 vs. ExPASy Swiss-Prot
Match: Q6P949 (Lysine-specific demethylase phf2 OS=Danio rerio OX=7955 GN=phf2 PE=2 SV=3)

HSP 1 Score: 66.2 bits (160), Expect = 8.3e-10
Identity = 35/115 (30.43%), Postives = 57/115 (49.57%), Query Frame = 0


Query: 137 VAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIDEAKKLDNFLCSDCS--------- 196
           V VYC C +PY+    M++C+ CKDWFH SC+G+  DEA  +D + C +C          
Sbjct: 4   VPVYCICRLPYDVTQFMIECDACKDWFHGSCVGVDEDEAPDIDIYHCPNCEKTHGKSTLK 63

Query: 197 -----SENDAKRSSNAFPVSPSAE-------AKEYSSLPDFPLCTSSSHLVLHFL 231
                +++D  +S +  PV   ++       ++ + S  D  +  S S L L +L
Sbjct: 64  KKKSWNKHDTGQSGDVRPVQNGSQVFIKELRSRTFPSSEDVVVKLSGSQLTLEYL 118

[Close]

BLAST of Cp4.1LG04g03780 vs. ExPASy Swiss-Prot
Match: Q9P281 (BAH and coiled-coil domain-containing protein 1 OS=Homo sapiens OX=9606 GN=BAHCC1 PE=1 SV=4)

HSP 1 Score: 65.9 bits (159), Expect = 1.1e-09
Identity = 38/125 (30.40%), Postives = 59/125 (47.20%), Query Frame = 0


Query: 23   VRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKEL 82
            +R GDC +   +     PY+ R+E +     +N+ V+V+W+Y PEE+  G+RQ  G   L
Sbjct: 2515 LRVGDCAVFLSAGRPNLPYIGRIESMWESWGSNMVVKVKWFYHPEETKLGKRQCDGKNAL 2574

Query: 83   FLSDHFDVQSAHTIEGKCTVHSFKNYTKLDNV-----GAEDYFCRFEYKAATGGF-TPDR 142
            + S H D     TI  KC V + + Y ++          + Y+    Y   TG   T D 
Sbjct: 2575 YQSCHEDENDVQTISHKCQVVAREQYEQMARSRKCQDRQDLYYLAGTYDPTTGRLVTADG 2634

[Close]

BLAST of Cp4.1LG04g03780 vs. NCBI nr
Match: KAA0040219.1 (chromatin remodeling protein EBS-like isoform X1 [Cucumis melo var. makuwa] >TYK07129.1 chromatin remodeling protein EBS-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 505 bits (1301), Expect = 2.40e-177
Identity = 254/326 (77.91%), Postives = 273/326 (83.74%), Query Frame = 0


Query: 1   MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRV 60
           MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRV
Sbjct: 1   MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRV 60

Query: 61  RWYYRPEESIGGRRQFHGAKELFLSDHFDVQSAHTIEGKCTVHSFKNYTKLDNVGAEDYF 120
           RWYYRPEESIGGRRQFHGAKELFLSDHFDVQSAHTIEGKCTVHSFKNYTKL+NVGAEDYF
Sbjct: 61  RWYYRPEESIGGRRQFHGAKELFLSDHFDVQSAHTIEGKCTVHSFKNYTKLENVGAEDYF 120

Query: 121 CRFEYKAATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIDEAKKLDN 180
           CRFEYKAATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTI+EAKKLD+
Sbjct: 121 CRFEYKAATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDH 180

Query: 181 FLCSDCSSENDAKRSSNAFPVSPSAEAKEYSSLPDFPLCTSSSHLVLH--FLLDDFGCIG 240
           FLCSDCSSEN+AKRS NAFPVSPSAEAK +       +     +      ++L +   I 
Sbjct: 181 FLCSDCSSENEAKRSLNAFPVSPSAEAKVFQDHLSSQIIVRIKYQKKRSEWILLNETDIR 240

Query: 241 AL------KWNQSVGRDDWLMKVHGSDKEVRFPAPLVSVNVDVVEMYSEDKILCSHKPES 300
            L      +W+QS GRDD L+++HGSDKEVRFP P VSVNVDV EMYSEDKILCSHKPE 
Sbjct: 241 ILVLNSHARWSQSAGRDDGLIRIHGSDKEVRFPGPFVSVNVDV-EMYSEDKILCSHKPEV 300

Query: 301 ----WLHDAKNCGGAWI-LKPEEYGG 313
               W+         W+ ++ EEYGG
Sbjct: 301 DFVLWMQ--------WLDIEAEEYGG 317

[Close]

BLAST of Cp4.1LG04g03780 vs. NCBI nr
Match: XP_022930734.1 (chromatin remodeling protein EBS-like [Cucurbita moschata] >XP_022930735.1 chromatin remodeling protein EBS-like [Cucurbita moschata] >XP_022988944.1 chromatin remodeling protein EBS-like [Cucurbita maxima] >XP_022988945.1 chromatin remodeling protein EBS-like [Cucurbita maxima] >XP_023530935.1 chromatin remodeling protein EBS-like [Cucurbita pepo subsp. pepo] >KAG6589146.1 Chromatin remodeling protein EBS, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 442 bits (1136), Expect = 3.59e-154
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0


Query: 1   MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRV 60
           MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRV
Sbjct: 1   MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRV 60

Query: 61  RWYYRPEESIGGRRQFHGAKELFLSDHFDVQSAHTIEGKCTVHSFKNYTKLDNVGAEDYF 120
           RWYYRPEESIGGRRQFHGAKELFLSDHFDVQSAHTIEGKCTVHSFKNYTKLDNVGAEDYF
Sbjct: 61  RWYYRPEESIGGRRQFHGAKELFLSDHFDVQSAHTIEGKCTVHSFKNYTKLDNVGAEDYF 120

Query: 121 CRFEYKAATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIDEAKKLDN 180
           CRFEYKAATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIDEAKKLDN
Sbjct: 121 CRFEYKAATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIDEAKKLDN 180

Query: 181 FLCSDCSSENDAKRSSNAFPVSPSAEAK 208
           FLCSDCSSENDAKRSSNAFPVSPSAEAK
Sbjct: 181 FLCSDCSSENDAKRSSNAFPVSPSAEAK 208

[Close]

BLAST of Cp4.1LG04g03780 vs. NCBI nr
Match: XP_038888817.1 (chromatin remodeling protein EBS-like isoform X2 [Benincasa hispida])

HSP 1 Score: 434 bits (1115), Expect = 4.38e-151
Identity = 203/208 (97.60%), Postives = 207/208 (99.52%), Query Frame = 0


Query: 1   MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRV 60
           MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRV
Sbjct: 1   MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRV 60

Query: 61  RWYYRPEESIGGRRQFHGAKELFLSDHFDVQSAHTIEGKCTVHSFKNYTKLDNVGAEDYF 120
           RWYYRPEESIGGRRQFHGAKELFLSDHFDVQSAHTIEGKCTVHSFKNYTKL+NVGAEDYF
Sbjct: 61  RWYYRPEESIGGRRQFHGAKELFLSDHFDVQSAHTIEGKCTVHSFKNYTKLENVGAEDYF 120

Query: 121 CRFEYKAATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIDEAKKLDN 180
           CRFEYKAATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTI+EAKKLD+
Sbjct: 121 CRFEYKAATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDH 180

Query: 181 FLCSDCSSENDAKRSSNAFPVSPSAEAK 208
           FLCSDCSSEN+AKRSSNAFPVSPSAE K
Sbjct: 181 FLCSDCSSENEAKRSSNAFPVSPSAEVK 208

[Close]

BLAST of Cp4.1LG04g03780 vs. NCBI nr
Match: XP_038888815.1 (chromatin remodeling protein EBS-like isoform X1 [Benincasa hispida] >XP_038888816.1 chromatin remodeling protein EBS-like isoform X1 [Benincasa hispida])

HSP 1 Score: 434 bits (1115), Expect = 5.64e-151
Identity = 203/208 (97.60%), Postives = 207/208 (99.52%), Query Frame = 0


Query: 1   MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRV 60
           MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRV
Sbjct: 1   MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRV 60

Query: 61  RWYYRPEESIGGRRQFHGAKELFLSDHFDVQSAHTIEGKCTVHSFKNYTKLDNVGAEDYF 120
           RWYYRPEESIGGRRQFHGAKELFLSDHFDVQSAHTIEGKCTVHSFKNYTKL+NVGAEDYF
Sbjct: 61  RWYYRPEESIGGRRQFHGAKELFLSDHFDVQSAHTIEGKCTVHSFKNYTKLENVGAEDYF 120

Query: 121 CRFEYKAATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIDEAKKLDN 180
           CRFEYKAATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTI+EAKKLD+
Sbjct: 121 CRFEYKAATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDH 180

Query: 181 FLCSDCSSENDAKRSSNAFPVSPSAEAK 208
           FLCSDCSSEN+AKRSSNAFPVSPSAE K
Sbjct: 181 FLCSDCSSENEAKRSSNAFPVSPSAEVK 208

[Close]

BLAST of Cp4.1LG04g03780 vs. NCBI nr
Match: XP_022136260.1 (chromatin remodeling protein EBS-like [Momordica charantia])

HSP 1 Score: 433 bits (1113), Expect = 1.14e-150
Identity = 203/208 (97.60%), Postives = 207/208 (99.52%), Query Frame = 0


Query: 1   MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRV 60
           MAKTKPGKKDLDSYTIKGTNKIVRPG+CVLMRPSDSDKPPYVARVEKIEADHRNNVKVRV
Sbjct: 1   MAKTKPGKKDLDSYTIKGTNKIVRPGECVLMRPSDSDKPPYVARVEKIEADHRNNVKVRV 60

Query: 61  RWYYRPEESIGGRRQFHGAKELFLSDHFDVQSAHTIEGKCTVHSFKNYTKLDNVGAEDYF 120
           RWYYRPEESIGGRRQFHGAKELFLSDHFDVQSAHTIEGKCTVHSFKNYTKL+NVGAEDYF
Sbjct: 61  RWYYRPEESIGGRRQFHGAKELFLSDHFDVQSAHTIEGKCTVHSFKNYTKLENVGAEDYF 120

Query: 121 CRFEYKAATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIDEAKKLDN 180
           CRFEYKAATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTI+EAKKLD+
Sbjct: 121 CRFEYKAATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDH 180

Query: 181 FLCSDCSSENDAKRSSNAFPVSPSAEAK 208
           FLCSDCSSENDAKRS NAFPVSPSAEAK
Sbjct: 181 FLCSDCSSENDAKRSLNAFPVSPSAEAK 208

[Close]

BLAST of Cp4.1LG04g03780 vs. ExPASy TrEMBL
Match: A0A5D3C9X7 (Chromatin remodeling protein EBS-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G004500 PE=4 SV=1)

HSP 1 Score: 505 bits (1301), Expect = 1.16e-177
Identity = 254/326 (77.91%), Postives = 273/326 (83.74%), Query Frame = 0


Query: 1   MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRV 60
           MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRV
Sbjct: 1   MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRV 60

Query: 61  RWYYRPEESIGGRRQFHGAKELFLSDHFDVQSAHTIEGKCTVHSFKNYTKLDNVGAEDYF 120
           RWYYRPEESIGGRRQFHGAKELFLSDHFDVQSAHTIEGKCTVHSFKNYTKL+NVGAEDYF
Sbjct: 61  RWYYRPEESIGGRRQFHGAKELFLSDHFDVQSAHTIEGKCTVHSFKNYTKLENVGAEDYF 120

Query: 121 CRFEYKAATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIDEAKKLDN 180
           CRFEYKAATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTI+EAKKLD+
Sbjct: 121 CRFEYKAATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDH 180

Query: 181 FLCSDCSSENDAKRSSNAFPVSPSAEAKEYSSLPDFPLCTSSSHLVLH--FLLDDFGCIG 240
           FLCSDCSSEN+AKRS NAFPVSPSAEAK +       +     +      ++L +   I 
Sbjct: 181 FLCSDCSSENEAKRSLNAFPVSPSAEAKVFQDHLSSQIIVRIKYQKKRSEWILLNETDIR 240

Query: 241 AL------KWNQSVGRDDWLMKVHGSDKEVRFPAPLVSVNVDVVEMYSEDKILCSHKPES 300
            L      +W+QS GRDD L+++HGSDKEVRFP P VSVNVDV EMYSEDKILCSHKPE 
Sbjct: 241 ILVLNSHARWSQSAGRDDGLIRIHGSDKEVRFPGPFVSVNVDV-EMYSEDKILCSHKPEV 300

Query: 301 ----WLHDAKNCGGAWI-LKPEEYGG 313
               W+         W+ ++ EEYGG
Sbjct: 301 DFVLWMQ--------WLDIEAEEYGG 317

[Close]

BLAST of Cp4.1LG04g03780 vs. ExPASy TrEMBL
Match: A0A6J1JN00 (chromatin remodeling protein EBS-like OS=Cucurbita maxima OX=3661 GN=LOC111486148 PE=4 SV=1)

HSP 1 Score: 442 bits (1136), Expect = 1.74e-154
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0


Query: 1   MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRV 60
           MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRV
Sbjct: 1   MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRV 60

Query: 61  RWYYRPEESIGGRRQFHGAKELFLSDHFDVQSAHTIEGKCTVHSFKNYTKLDNVGAEDYF 120
           RWYYRPEESIGGRRQFHGAKELFLSDHFDVQSAHTIEGKCTVHSFKNYTKLDNVGAEDYF
Sbjct: 61  RWYYRPEESIGGRRQFHGAKELFLSDHFDVQSAHTIEGKCTVHSFKNYTKLDNVGAEDYF 120

Query: 121 CRFEYKAATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIDEAKKLDN 180
           CRFEYKAATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIDEAKKLDN
Sbjct: 121 CRFEYKAATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIDEAKKLDN 180

Query: 181 FLCSDCSSENDAKRSSNAFPVSPSAEAK 208
           FLCSDCSSENDAKRSSNAFPVSPSAEAK
Sbjct: 181 FLCSDCSSENDAKRSSNAFPVSPSAEAK 208

[Close]

BLAST of Cp4.1LG04g03780 vs. ExPASy TrEMBL
Match: A0A6J1ESB9 (chromatin remodeling protein EBS-like OS=Cucurbita moschata OX=3662 GN=LOC111437125 PE=4 SV=1)

HSP 1 Score: 442 bits (1136), Expect = 1.74e-154
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0


Query: 1   MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRV 60
           MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRV
Sbjct: 1   MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRV 60

Query: 61  RWYYRPEESIGGRRQFHGAKELFLSDHFDVQSAHTIEGKCTVHSFKNYTKLDNVGAEDYF 120
           RWYYRPEESIGGRRQFHGAKELFLSDHFDVQSAHTIEGKCTVHSFKNYTKLDNVGAEDYF
Sbjct: 61  RWYYRPEESIGGRRQFHGAKELFLSDHFDVQSAHTIEGKCTVHSFKNYTKLDNVGAEDYF 120

Query: 121 CRFEYKAATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIDEAKKLDN 180
           CRFEYKAATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIDEAKKLDN
Sbjct: 121 CRFEYKAATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIDEAKKLDN 180

Query: 181 FLCSDCSSENDAKRSSNAFPVSPSAEAK 208
           FLCSDCSSENDAKRSSNAFPVSPSAEAK
Sbjct: 181 FLCSDCSSENDAKRSSNAFPVSPSAEAK 208

[Close]

BLAST of Cp4.1LG04g03780 vs. ExPASy TrEMBL
Match: A0A6J1C3E6 (chromatin remodeling protein EBS-like OS=Momordica charantia OX=3673 GN=LOC111007999 PE=4 SV=1)

HSP 1 Score: 433 bits (1113), Expect = 5.51e-151
Identity = 203/208 (97.60%), Postives = 207/208 (99.52%), Query Frame = 0


Query: 1   MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRV 60
           MAKTKPGKKDLDSYTIKGTNKIVRPG+CVLMRPSDSDKPPYVARVEKIEADHRNNVKVRV
Sbjct: 1   MAKTKPGKKDLDSYTIKGTNKIVRPGECVLMRPSDSDKPPYVARVEKIEADHRNNVKVRV 60

Query: 61  RWYYRPEESIGGRRQFHGAKELFLSDHFDVQSAHTIEGKCTVHSFKNYTKLDNVGAEDYF 120
           RWYYRPEESIGGRRQFHGAKELFLSDHFDVQSAHTIEGKCTVHSFKNYTKL+NVGAEDYF
Sbjct: 61  RWYYRPEESIGGRRQFHGAKELFLSDHFDVQSAHTIEGKCTVHSFKNYTKLENVGAEDYF 120

Query: 121 CRFEYKAATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIDEAKKLDN 180
           CRFEYKAATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTI+EAKKLD+
Sbjct: 121 CRFEYKAATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDH 180

Query: 181 FLCSDCSSENDAKRSSNAFPVSPSAEAK 208
           FLCSDCSSENDAKRS NAFPVSPSAEAK
Sbjct: 181 FLCSDCSSENDAKRSLNAFPVSPSAEAK 208

[Close]

BLAST of Cp4.1LG04g03780 vs. ExPASy TrEMBL
Match: A0A1S3C280 (chromatin remodeling protein EBS-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495624 PE=4 SV=1)

HSP 1 Score: 433 bits (1113), Expect = 5.51e-151
Identity = 203/208 (97.60%), Postives = 207/208 (99.52%), Query Frame = 0


Query: 1   MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRV 60
           MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRV
Sbjct: 1   MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRV 60

Query: 61  RWYYRPEESIGGRRQFHGAKELFLSDHFDVQSAHTIEGKCTVHSFKNYTKLDNVGAEDYF 120
           RWYYRPEESIGGRRQFHGAKELFLSDHFDVQSAHTIEGKCTVHSFKNYTKL+NVGAEDYF
Sbjct: 61  RWYYRPEESIGGRRQFHGAKELFLSDHFDVQSAHTIEGKCTVHSFKNYTKLENVGAEDYF 120

Query: 121 CRFEYKAATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIDEAKKLDN 180
           CRFEYKAATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTI+EAKKLD+
Sbjct: 121 CRFEYKAATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDH 180

Query: 181 FLCSDCSSENDAKRSSNAFPVSPSAEAK 208
           FLCSDCSSEN+AKRS NAFPVSPSAEAK
Sbjct: 181 FLCSDCSSENEAKRSLNAFPVSPSAEAK 208

[Close]

BLAST of Cp4.1LG04g03780 vs. TAIR 10
Match: AT4G22140.1 (PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein )

HSP 1 Score: 375.9 bits (964), Expect = 3.5e-104
Identity = 170/212 (80.19%), Postives = 193/212 (91.04%), Query Frame = 0


Query: 2   AKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVR 61
           +K K G+K+LDSYTIKGTNK+VR GDCVLMRPSD+ KPPYVARVEKIEAD RNNVKV  R
Sbjct: 10  SKIKTGRKELDSYTIKGTNKVVRAGDCVLMRPSDAGKPPYVARVEKIEADARNNVKVHCR 69

Query: 62  WYYRPEESIGGRRQFHGAKELFLSDHFDVQSAHTIEGKCTVHSFKNYTKLDNVGAEDYFC 121
           WYYRPEES+GGRRQFHGAKELFLSDHFDVQSAHTIEGKC VH+FKNYT+L+NVGAEDY+C
Sbjct: 70  WYYRPEESLGGRRQFHGAKELFLSDHFDVQSAHTIEGKCIVHTFKNYTRLENVGAEDYYC 129

Query: 122 RFEYKAATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIDEAKKLDNF 181
           RFEYKAATG FTPDRVAVYCKCEMPYNPDDLMVQCEGCKDW+HP+C+GMTI+EAKKLD+F
Sbjct: 130 RFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDHF 189

Query: 182 LCSDCSSENDAKRSSNAFPVSPSAEAKEYSSL 214
           +C++CSS++D K+S N F  SP+ + K   SL
Sbjct: 190 VCAECSSDDDVKKSQNGFTSSPADDVKVRLSL 221

[Close]

BLAST of Cp4.1LG04g03780 vs. TAIR 10
Match: AT4G22140.2 (PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein )

HSP 1 Score: 375.6 bits (963), Expect = 4.5e-104
Identity = 168/207 (81.16%), Postives = 191/207 (92.27%), Query Frame = 0


Query: 2   AKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHRNNVKVRVR 61
           +K K G+K+LDSYTIKGTNK+VR GDCVLMRPSD+ KPPYVARVEKIEAD RNNVKV  R
Sbjct: 10  SKIKTGRKELDSYTIKGTNKVVRAGDCVLMRPSDAGKPPYVARVEKIEADARNNVKVHCR 69

Query: 62  WYYRPEESIGGRRQFHGAKELFLSDHFDVQSAHTIEGKCTVHSFKNYTKLDNVGAEDYFC 121
           WYYRPEES+GGRRQFHGAKELFLSDHFDVQSAHTIEGKC VH+FKNYT+L+NVGAEDY+C
Sbjct: 70  WYYRPEESLGGRRQFHGAKELFLSDHFDVQSAHTIEGKCIVHTFKNYTRLENVGAEDYYC 129

Query: 122 RFEYKAATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIDEAKKLDNF 181
           RFEYKAATG FTPDRVAVYCKCEMPYNPDDLMVQCEGCKDW+HP+C+GMTI+EAKKLD+F
Sbjct: 130 RFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDHF 189

Query: 182 LCSDCSSENDAKRSSNAFPVSPSAEAK 209
           +C++CSS++D K+S N F  SP+ + K
Sbjct: 190 VCAECSSDDDVKKSQNGFTSSPADDVK 216

[Close]

BLAST of Cp4.1LG04g03780 vs. TAIR 10
Match: AT4G39100.1 (PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein )

HSP 1 Score: 290.4 bits (742), Expect = 1.9e-78
Identity = 138/214 (64.49%), Postives = 161/214 (75.23%), Query Frame = 0


Query: 1   MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHR-NNVKVR 60
           M K K  +K L SY +K  NK ++ GD VLMR S+  KP YVARVE IE D R ++ KVR
Sbjct: 1   MPKQKAPRKQLKSYKLKHINKSIQEGDAVLMRSSEPGKPSYVARVEAIETDARGSHAKVR 60

Query: 61  VRWYYRPEESIGGRRQFHGAKELFLSDHFDVQSAHTIEGKCTVHSFKNYTKLDNVGAEDY 120
           VRWYYRPEESIGGRRQFHGAKE+FLSDHFD QSA TIEGKC VHSF +YTKLD+VG +D+
Sbjct: 61  VRWYYRPEESIGGRRQFHGAKEVFLSDHFDFQSADTIEGKCKVHSFSSYTKLDSVGNDDF 120

Query: 121 FCRFEYKAATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIDEAKKLD 180
           FCRFEY + TG F PDRV V+CKCEMPYNPDDLMVQCE C +WFHPSC+G TI+EAKK D
Sbjct: 121 FCRFEYNSTTGAFDPDRVTVFCKCEMPYNPDDLMVQCEECSEWFHPSCIGTTIEEAKKPD 180

Query: 181 NFLCSDCSSENDAKRSSNAFPVSPSAEAKEYSSL 214
           NF C +CS +     +SN+   +  A+     SL
Sbjct: 181 NFYCEECSPQQQNLHNSNSTSNNRDAKVNGKRSL 214

[Close]

BLAST of Cp4.1LG04g03780 vs. TAIR 10
Match: AT4G04260.1 (Bromo-adjacent homology (BAH) domain-containing protein )

HSP 1 Score: 255.4 bits (651), Expect = 6.9e-68
Identity = 125/179 (69.83%), Postives = 144/179 (80.45%), Query Frame = 0


Query: 31  MRPSDSDKPPYVARVEKIEADHRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHFDV 90
           MRPSD+ K PYVARVEKIEAD RNNVKV  RWYY PEES GGRRQ HGAKELFLSDHFDV
Sbjct: 1   MRPSDAGKAPYVARVEKIEADARNNVKVHCRWYYCPEESHGGRRQLHGAKELFLSDHFDV 60

Query: 91  QSAHTIEGKCTVHSFKNYTKLDNVGAEDYFCRFEYKAATGGFTPDRVAVYCKCEMPYNPD 150
           QSAHTIEGKC VH+FKNYT+L+NVG EDY+C F+YKAATG FTPDRVAVY KCEMPYN D
Sbjct: 61  QSAHTIEGKCIVHTFKNYTRLENVGVEDYYCIFDYKAATGAFTPDRVAVYYKCEMPYNSD 120

Query: 151 DLMVQCEGCKDWFHPSCMGMTIDEAKKLDNFLCSDCSSEND-AKRSSNAFPVSPSAEAK 209
           +LM +   C    H +C+G+TI+EAKKL++F+C +CSS+ D  KR  N F  S + + K
Sbjct: 121 ELM-ELLLCHYRVHLACVGVTIEEAKKLEHFVCVECSSDEDGVKRFQNGFASSTTNDLK 178

[Close]

BLAST of Cp4.1LG04g03780 vs. TAIR 10
Match: AT4G39100.2 (PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein )

HSP 1 Score: 247.7 bits (631), Expect = 1.4e-65
Identity = 115/163 (70.55%), Postives = 130/163 (79.75%), Query Frame = 0


Query: 1   MAKTKPGKKDLDSYTIKGTNKIVRPGDCVLMRPSDSDKPPYVARVEKIEADHR-NNVKVR 60
           M K K  +K L SY +K  NK ++ GD VLMR S+  KP YVARVE IE D R ++ KVR
Sbjct: 1   MPKQKAPRKQLKSYKLKHINKSIQEGDAVLMRSSEPGKPSYVARVEAIETDARGSHAKVR 60

Query: 61  VRWYYRPEESIGGRRQFHGAKELFLSDHFDVQSAHTIEGKCTVHSFKNYTKLDNVGAEDY 120
           VRWYYRPEESIGGRRQFHGAKE+FLSDHFD QSA TIEGKC VHSF +YTKLD+VG +D+
Sbjct: 61  VRWYYRPEESIGGRRQFHGAKEVFLSDHFDFQSADTIEGKCKVHSFSSYTKLDSVGNDDF 120

Query: 121 FCRFEYKAATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDW 163
           FCRFEY + TG F PDRV V+CKCEMPYNPDDLMVQCE C +W
Sbjct: 121 FCRFEYNSTTGAFDPDRVTVFCKCEMPYNPDDLMVQCEECSEW 163

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g03780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JL28	4.9e-103	80.19	Chromatin remodeling protein EBS OS=Arabidopsis thaliana OX=3702 GN=EBS PE=1 SV=...	[more]
Q9FEN9	2.7e-77	64.49	Chromatin remodeling protein SHL OS=Arabidopsis thaliana OX=3702 GN=SHL PE=1 SV=...	[more]
F4JGB7	1.4e-70	65.12	Chromatin remodeling protein At4g04260 OS=Arabidopsis thaliana OX=3702 GN=At4g04...	[more]
Q6P949	8.3e-10	30.43	Lysine-specific demethylase phf2 OS=Danio rerio OX=7955 GN=phf2 PE=2 SV=3	[more]
Q9P281	1.1e-09	30.40	BAH and coiled-coil domain-containing protein 1 OS=Homo sapiens OX=9606 GN=BAHCC...	[more]

BLAST of Cp4.1LG04g03780 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0040219.1	2.40e-177	77.91	chromatin remodeling protein EBS-like isoform X1 [Cucumis melo var. makuwa] >TYK...	[more]
XP_022930734.1	3.59e-154	100.00	chromatin remodeling protein EBS-like [Cucurbita moschata] >XP_022930735.1 chrom...	[more]
XP_038888817.1	4.38e-151	97.60	chromatin remodeling protein EBS-like isoform X2 [Benincasa hispida]	[more]
XP_038888815.1	5.64e-151	97.60	chromatin remodeling protein EBS-like isoform X1 [Benincasa hispida] >XP_0388888...	[more]
XP_022136260.1	1.14e-150	97.60	chromatin remodeling protein EBS-like [Momordica charantia]	[more]

BLAST of Cp4.1LG04g03780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C9X7	1.16e-177	77.91	Chromatin remodeling protein EBS-like isoform X1 OS=Cucumis melo var. makuwa OX=...	[more]
A0A6J1JN00	1.74e-154	100.00	chromatin remodeling protein EBS-like OS=Cucurbita maxima OX=3661 GN=LOC11148614...	[more]
A0A6J1ESB9	1.74e-154	100.00	chromatin remodeling protein EBS-like OS=Cucurbita moschata OX=3662 GN=LOC111437...	[more]
A0A6J1C3E6	5.51e-151	97.60	chromatin remodeling protein EBS-like OS=Momordica charantia OX=3673 GN=LOC11100...	[more]
A0A1S3C280	5.51e-151	97.60	chromatin remodeling protein EBS-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC1...	[more]

BLAST of Cp4.1LG04g03780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G22140.1	3.5e-104	80.19	PHD finger family protein / bromo-adjacent homology (BAH) domain-containing prot...	[more]
AT4G22140.2	4.5e-104	81.16	PHD finger family protein / bromo-adjacent homology (BAH) domain-containing prot...	[more]
AT4G39100.1	1.9e-78	64.49	PHD finger family protein / bromo-adjacent homology (BAH) domain-containing prot...	[more]
AT4G04260.1	6.9e-68	69.83	Bromo-adjacent homology (BAH) domain-containing protein	[more]
AT4G39100.2	1.4e-65	70.55	PHD finger family protein / bromo-adjacent homology (BAH) domain-containing prot...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001965	Zinc finger, PHD-type	SMART	SM00249	PHD_3	coord: 140..187 e-value: 4.7E-10 score: 49.4
IPR001025	Bromo adjacent homology (BAH) domain	SMART	SM00439	BAH_4	coord: 21..136 e-value: 2.5E-42 score: 156.6
IPR001025	Bromo adjacent homology (BAH) domain	PFAM	PF01426	BAH	coord: 23..135 e-value: 1.1E-22 score: 80.1
IPR001025	Bromo adjacent homology (BAH) domain	PROSITE	PS51038	BAH	coord: 21..136 score: 23.482244
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 134..201 e-value: 2.0E-20 score: 73.9
IPR043151	Bromo adjacent homology (BAH) domain superfamily	GENE3D	2.30.30.490		coord: 1..133 e-value: 9.0E-31 score: 108.9
IPR019787	Zinc finger, PHD-finger	PFAM	PF00628	PHD	coord: 140..188 e-value: 2.8E-10 score: 39.9
IPR019787	Zinc finger, PHD-finger	PROSITE	PS50016	ZF_PHD_2	coord: 138..189 score: 9.2497
None	No IPR available	PANTHER	PTHR46364:SF12	SUBFAMILY NOT NAMED	coord: 1..208
None	No IPR available	PANTHER	PTHR46364	OS08G0421900 PROTEIN	coord: 1..208
None	No IPR available	CDD	cd04714	BAH_BAHCC1	coord: 22..156 e-value: 9.65417E-59 score: 184.142
IPR019786	Zinc finger, PHD-type, conserved site	PROSITE	PS01359	ZF_PHD_1	coord: 141..186
IPR011011	Zinc finger, FYVE/PHD-type	SUPERFAMILY	57903	FYVE/PHD zinc finger	coord: 131..190

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g03780.1	Cp4.1LG04g03780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006325	chromatin organization
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0046872	metal ion binding