Cp4.1LG04g03710 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG04g03710
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	fasciclin-like arabinogalactan protein 13
Location	Cp4.1LG04: 7025066 .. 7026078 (-)
RNA-Seq Expression	Cp4.1LG04g03710
Synteny	Cp4.1LG04g03710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAGAGACGCGTACCAAAATACGCCTATTTTCCAATTATTCTCTCCTCCATTCCCTCAAGCTATGAGTTGTCGCCATTAAATCCAGCTCACATCCAACCCCACTTTCACCTCCTCCACTTCCCCCATCTCCCTTATAAAATCATCATTCCTCCTCCACTAACTCCACCGTCGCCACCGCCGCCGCCCCTCCGCCATGGCCTCCACCGCTCTCCTCCTCCTCCTCCTCCCCTTCCTTCTCTTCTCTGTTACCACTCTGGCCCAAACCCCGGCGGCTCCCGCTCCTTCCTCGCCGGGGCCACTCAACATAACCGGCATTCTCGAAAAGGGCGGCCAATTCACGACGTTCATCCGCCTCCTCAACGAAACCAAAATCAACACCCAGCTCGACAATCAGCTCAACAACACTCCTCAGGGGATGACCATTCTTGCCCCCACTGATAATGCCTTCAATTCCCTTAAGCCAGGCGCCCTCAATGGCCTCAACGACCAAGAAAAAACCCAATTATTGCTTTACCATGTCTTGACTAAGGTAATTTCATCTTCAATTTCTCAATTTTAAGGAACAATATTAATTGGGTTTTTCTTGATTTTTTATTTCAATTTGGTTTCGATCCAGTTCTACACCTTGACGGACCTCCAGACCGTCAGTAACCCAGTCAGGACACTCGCCGGCGACTGGGGGTTGAACTTCACCGGCCAAGCAAACCAAGTCAACGTGTCCACCGGCGTCGTCATGGTGGCTGTCAACAACAAGCTCAGAGAGCAGTCTCCGTTGTCTATTTACGCAGTGGAGAAAGTTTTGTTGCCGGAGGCTCTTTTCGGCGACCACCCCGCTGCCCCTCCTCCGAAAGCTTCGGGTCCGGCGAGCGAAAAATCGCCGGCCGATAGCGAAACACCGCCGAAATCTGATGCTGCCCACTCGCCGGCGGATCATAAGGATGCGGCTCCGAGAAACGGCGTCGGTTTGGGATTGGTTTTGGGATTTGGTTTGATTGCCTTTAGTGTTCTTTNT

mRNA sequence

TAAGAGACGCGTACCAAAATACGCCTATTTTCCAATTATTCTCTCCTCCATTCCCTCAAGCTATGAGTTGTCGCCATTAAATCCAGCTCACATCCAACCCCACTTTCACCTCCTCCACTTCCCCCATCTCCCTTATAAAATCATCATTCCTCCTCCACTAACTCCACCGTCGCCACCGCCGCCGCCCCTCCGCCATGGCCTCCACCGCTCTCCTCCTCCTCCTCCTCCCCTTCCTTCTCTTCTCTGTTACCACTCTGGCCCAAACCCCGGCGGCTCCCGCTCCTTCCTCGCCGGGGCCACTCAACATAACCGGCATTCTCGAAAAGGGCGGCCAATTCACGACGTTCATCCGCCTCCTCAACGAAACCAAAATCAACACCCAGCTCGACAATCAGCTCAACAACACTCCTCAGGGGATGACCATTCTTGCCCCCACTGATAATGCCTTCAATTCCCTTAAGCCAGGCGCCCTCAATGGCCTCAACGACCAAGAAAAAACCCAATTATTGCTTTACCATGTCTTGACTAAGTTCTACACCTTGACGGACCTCCAGACCGTCAGTAACCCAGTCAGGACACTCGCCGGCGACTGGGGGTTGAACTTCACCGGCCAAGCAAACCAAGTCAACGTGTCCACCGGCGTCGTCATGGTGGCTGTCAACAACAAGCTCAGAGAGCAGTCTCCGTTGTCTATTTACGCAGTGGAGAAAGTTTTGTTGCCGGAGGCTCTTTTCGGCGACCACCCCGCTGCCCCTCCTCCGAAAGCTTCGGGTCCGGCGAGCGAAAAATCGCCGGCCGATAGCGAAACACCGCCGAAATCTGATGCTGCCCACTCGCCGGCGGATCATAAGGATGCGGCTCCGAGAAACGGCGTCGGTTTGGGATTGGTTTTGGGATTTGGTTTGATTGCCTTTAGTGTTCTTTNT

Coding sequence (CDS)

ATGGCCTCCACCGCTCTCCTCCTCCTCCTCCTCCCCTTCCTTCTCTTCTCTGTTACCACTCTGGCCCAAACCCCGGCGGCTCCCGCTCCTTCCTCGCCGGGGCCACTCAACATAACCGGCATTCTCGAAAAGGGCGGCCAATTCACGACGTTCATCCGCCTCCTCAACGAAACCAAAATCAACACCCAGCTCGACAATCAGCTCAACAACACTCCTCAGGGGATGACCATTCTTGCCCCCACTGATAATGCCTTCAATTCCCTTAAGCCAGGCGCCCTCAATGGCCTCAACGACCAAGAAAAAACCCAATTATTGCTTTACCATGTCTTGACTAAGTTCTACACCTTGACGGACCTCCAGACCGTCAGTAACCCAGTCAGGACACTCGCCGGCGACTGGGGGTTGAACTTCACCGGCCAAGCAAACCAAGTCAACGTGTCCACCGGCGTCGTCATGGTGGCTGTCAACAACAAGCTCAGAGAGCAGTCTCCGTTGTCTATTTACGCAGTGGAGAAAGTTTTGTTGCCGGAGGCTCTTTTCGGCGACCACCCCGCTGCCCCTCCTCCGAAAGCTTCGGGTCCGGCGAGCGAAAAATCGCCGGCCGATAGCGAAACACCGCCGAAATCTGATGCTGCCCACTCGCCGGCGGATCATAAGGATGCGGCTCCGAGAAACGGCGTCGGTTTGGGATTGGTTTTGGGATTTGGTTTGATTGCCTTTAGTGTTCTTTNT

Protein sequence

MASTALLLLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETKINTQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDLQTVSNPVRTLAGDWGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVEKVLLPEALFGDHPAAPPPKASGPASEKSPADSETPPKSDAAHSPADHKDAAPRNGVGLGLVLGFGLIAFSVLX

Homology

[Close]

BLAST of Cp4.1LG04g03710 vs. ExPASy Swiss-Prot
Match: Q9FFH6 (Fasciclin-like arabinogalactan protein 13 OS=Arabidopsis thaliana OX=3702 GN=FLA13 PE=1 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 1.3e-54
Identity = 131/253 (51.78%), Postives = 167/253 (66.01%), Query Frame = 0


Query: 1   MASTALLLLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETKI 60
           MA+T LLLLLL  +  S    AQ  AAPAP   GP+NIT ILEKGGQF T IRLLN T+I
Sbjct: 1   MATTPLLLLLLTAVFLSTEITAQR-AAPAPGPAGPINITAILEKGGQFVTLIRLLNTTQI 60

Query: 61  NTQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDLQ 120
             Q++ Q+N++ +GMT+LAPTDNAF +LKPG LN L+  ++ +L+LYHV  KFYTL DL 
Sbjct: 61  GNQINIQINSSSEGMTVLAPTDNAFQNLKPGTLNKLSPDDQVKLILYHVSPKFYTLEDLL 120

Query: 121 TVSNPVRTLA------GDWGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVEKVL 180
           +VSNPVRT A      G +GLNFTGQ NQVNVSTGVV   ++  LR++ PL++Y V+ VL
Sbjct: 121 SVSNPVRTQASGRDVGGVYGLNFTGQGNQVNVSTGVVETRLSTSLRQERPLAVYVVDMVL 180

Query: 181 LPEALFGDH---PAAPPPKASGPASEKSPADSETPPKSDAAHSPAD-HKDAAPRNGVGLG 240
           LPE +FG+    P APPPK+      KSP  S+    S  A +P++  K  +     GLG
Sbjct: 181 LPEEMFGERKISPMAPPPKS------KSPDVSDDSESSKKAAAPSESEKSGSGEMNTGLG 240

Query: 241 LVLGFGLIAFSVL 244
           L LG  ++    L
Sbjct: 241 LGLGLVVLCLKFL 246

[Close]

BLAST of Cp4.1LG04g03710 vs. ExPASy Swiss-Prot
Match: Q9ZWA8 (Fasciclin-like arabinogalactan protein 9 OS=Arabidopsis thaliana OX=3702 GN=FLA9 PE=2 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 8.7e-51
Identity = 123/254 (48.43%), Postives = 167/254 (65.75%), Query Frame = 0


Query: 1   MASTALL---LLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNE 60
           MA+T L    LLL+  +L +    AQ PAAPAP   GP+N+T ILEKGGQFTTFI LLN 
Sbjct: 1   MATTRLTLAPLLLIAAVLLATKATAQ-PAAPAPEPAGPINLTAILEKGGQFTTFIHLLNI 60

Query: 61  TKINTQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLT 120
           T++ +Q++ Q+N++ +GMT+ APTDNAF +LKPG LN L+  ++ +L+LYHV  K+Y++ 
Sbjct: 61  TQVGSQVNIQVNSSSEGMTVFAPTDNAFQNLKPGTLNQLSPDDQVKLILYHVSPKYYSMD 120

Query: 121 DLQTVSNPVRTLA-----GDWGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVEK 180
           DL +VSNPVRT A     G +GLNFTGQ NQ+NVSTG V   ++N LR+Q PL++Y V+ 
Sbjct: 121 DLLSVSNPVRTQASGRDNGVYGLNFTGQTNQINVSTGYVETRISNSLRQQRPLAVYVVDM 180

Query: 181 VLLPEALFGDH---PAAPPPKASGPASEKSPADSETPPKSDAAHSPADHKDAAPRNGVGL 240
           VLLP  +FG+H   P AP PK+      KS   ++    +  A SP+D K  +    VGL
Sbjct: 181 VLLPGEMFGEHKLSPIAPAPKS------KSGGVTDDSGSTKKAASPSD-KSGSGEKKVGL 240

Query: 241 GLVLGFGLIAFSVL 244
           G  LG  ++    L
Sbjct: 241 GFGLGLIVLCLKFL 246

[Close]

BLAST of Cp4.1LG04g03710 vs. ExPASy Swiss-Prot
Match: Q9SIL7 (Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana OX=3702 GN=FLA6 PE=2 SV=2)

HSP 1 Score: 198.0 bits (502), Expect = 1.3e-49
Identity = 122/252 (48.41%), Postives = 161/252 (63.89%), Query Frame = 0


Query: 1   MASTALLLLLLPFLLFSVTTLAQTPAAPAPSS-PGPLNITGILEKGGQFTTFIRLLNETK 60
           M+S+    ++L   LF++  +   P APAP++   P+N+T ILE G QFTT I+LLN T+
Sbjct: 1   MSSSLFSYVVLLIFLFTIPYIQSQPTAPAPTTEKSPINLTAILEAGHQFTTLIQLLNTTQ 60

Query: 61  INTQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDL 120
           +  Q+  QLN++ QGMTI APTDNAFN LKPG LN L  Q++ QL+LYH++ K+Y+L+DL
Sbjct: 61  VGFQVSVQLNSSDQGMTIFAPTDNAFNKLKPGTLNSLTYQQQIQLMLYHIIPKYYSLSDL 120

Query: 121 QTVSNPVRTLA-----GDWGLNFTGQA--NQVNVSTGVVMVAVNNKLREQSPLSIYAVEK 180
              SNPVRT A     G +GLNFTGQA  NQVNVSTGVV   +NN LR+Q PL++Y V+ 
Sbjct: 121 LLASNPVRTQATGQDGGVFGLNFTGQAQSNQVNVSTGVVETRINNALRQQFPLAVYVVDS 180

Query: 181 VLLPEALFGDHPAAPPPKASGPASEKSPADSETPPKSDAAHSPADHKDAAPR-NGVGLGL 240
           VLLPE LFG      P  A  P S  S +D+++P   D      +HK A        LG+
Sbjct: 181 VLLPEELFG--TKTTPTGAPAPKSSTSSSDADSPAADD------EHKSAGSSVKRTSLGI 240

Query: 241 VLGFGLIAFSVL 244
           V+ F L   SV+
Sbjct: 241 VVSFALFCCSVI 244

[Close]

BLAST of Cp4.1LG04g03710 vs. ExPASy Swiss-Prot
Match: Q8LEJ6 (Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana OX=3702 GN=FLA11 PE=2 SV=2)

HSP 1 Score: 169.1 bits (427), Expect = 6.3e-41
Identity = 108/229 (47.16%), Postives = 135/229 (58.95%), Query Frame = 0


Query: 10  LLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETKINTQLDNQLN 69
           L  F L   TT  Q   APAP   GP NIT ILEK GQFT FIRLL  T+ + Q++ QLN
Sbjct: 12  LFIFFLVIATTYGQ---APAPGPSGPTNITAILEKAGQFTLFIRLLKSTQASDQINTQLN 71

Query: 70  -NTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDLQTVSNPVRT 129
            ++  G+T+ APTDNAFNSLK G LN L+DQ+K QL+ +HVL    T+   QTVSNP+RT
Sbjct: 72  SSSSNGLTVFAPTDNAFNSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVSNPLRT 131

Query: 130 LAGD-----WGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVEKVLLPEALFGDH 189
            AGD     + LN T   NQVN++TGVV   V N +     L++Y V++VLLP A+FG  
Sbjct: 132 QAGDGQNGKFPLNITSSGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLLPLAMFGSS 191

Query: 190 PA-APPPKASGPASEKSPADSETPPKSDAAHSPADHKDAAPRNGVGLGL 232
            A AP P+  G  S+ S +        D      D  D A R G G G+
Sbjct: 192 VAPAPAPEKGGSVSKGSASG------GDDGGDSTDSSD-AERTGFGFGI 230

[Close]

BLAST of Cp4.1LG04g03710 vs. ExPASy Swiss-Prot
Match: Q8LEE9 (Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana OX=3702 GN=FLA12 PE=2 SV=2)

HSP 1 Score: 160.6 bits (405), Expect = 2.2e-38
Identity = 96/221 (43.44%), Postives = 135/221 (61.09%), Query Frame = 0


Query: 5   ALLLLLLPFLLFSVTT---LAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETKIN 64
           +L++LL   LL   TT   L+Q   A AP+ PGP N+T ILEK GQFT FIRLL  T + 
Sbjct: 4   SLIILLFTVLLLLTTTPGILSQPSPAVAPAPPGPTNVTKILEKAGQFTVFIRLLKSTGVA 63

Query: 65  TQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDLQT 124
            QL  QLNN+  G+TI AP+D++F  LK G LN L D+++ +L+ +HV+  + + ++ QT
Sbjct: 64  NQLYGQLNNSDNGITIFAPSDSSFTGLKAGTLNSLTDEQQVELIQFHVIPSYVSSSNFQT 123

Query: 125 VSNPVRTLAGD-----WGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVEKVLLP 184
           +SNP+RT AGD     + LN T   N VN+++GV    V+  +     L++Y V+KVLLP
Sbjct: 124 ISNPLRTQAGDSADGHFPLNVTTSGNTVNITSGVTNTTVSGNVYSDGQLAVYQVDKVLLP 183

Query: 185 EALFGDHPAAPPPKASGPASEKSPADSETPPKSDAAHSPAD 218
           + +F   P AP P  S   S+K   DS+    S +  SPAD
Sbjct: 184 QQVFDPRPPAPAPAPSVSKSKKKKDDSD----SSSDDSPAD 220

[Close]

BLAST of Cp4.1LG04g03710 vs. NCBI nr
Match: XP_023530327.1 (fasciclin-like arabinogalactan protein 13 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 462 bits (1189), Expect = 1.16e-163
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 1   MASTALLLLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETKI 60
           MASTALLLLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETKI
Sbjct: 1   MASTALLLLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETKI 60

Query: 61  NTQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDLQ 120
           NTQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDLQ
Sbjct: 61  NTQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDLQ 120

Query: 121 TVSNPVRTLAGDWGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVEKVLLPEALF 180
           TVSNPVRTLAGDWGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVEKVLLPEALF
Sbjct: 121 TVSNPVRTLAGDWGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVEKVLLPEALF 180

Query: 181 GDHPAAPPPKASGPASEKSPADSETPPKSDAAHSPADHKDAAPRNGVGLGLVLGFGLIAF 240
           GDHPAAPPPKASGPASEKSPADSETPPKSDAAHSPADHKDAAPRNGVGLGLVLGFGLIAF
Sbjct: 181 GDHPAAPPPKASGPASEKSPADSETPPKSDAAHSPADHKDAAPRNGVGLGLVLGFGLIAF 240

Query: 241 SVL 243
           SVL
Sbjct: 241 SVL 243

[Close]

BLAST of Cp4.1LG04g03710 vs. NCBI nr
Match: XP_022930821.1 (fasciclin-like arabinogalactan protein 13 [Cucurbita moschata] >KAG6589141.1 Fasciclin-like arabinogalactan protein 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 454 bits (1169), Expect = 1.25e-160
Identity = 241/244 (98.77%), Postives = 242/244 (99.18%), Query Frame = 0


Query: 1   MASTALLLLLL-PFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETK 60
           MASTALLLLLL PFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETK
Sbjct: 1   MASTALLLLLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETK 60

Query: 61  INTQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDL 120
           INTQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDL
Sbjct: 61  INTQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDL 120

Query: 121 QTVSNPVRTLAGDWGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVEKVLLPEAL 180
           QTVSNPVRTLAGDWGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVE+VLLPEAL
Sbjct: 121 QTVSNPVRTLAGDWGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVEQVLLPEAL 180

Query: 181 FGDHPAAPPPKASGPASEKSPADSETPPKSDAAHSPADHKDAAPRNGVGLGLVLGFGLIA 240
           FGDHPAAPPPKASGPASEKSPAD ETPPKSDAAHSPADHKDAAPRNGVGLGLVLGFGLIA
Sbjct: 181 FGDHPAAPPPKASGPASEKSPADGETPPKSDAAHSPADHKDAAPRNGVGLGLVLGFGLIA 240

Query: 241 FSVL 243
           FSVL
Sbjct: 241 FSVL 244

[Close]

BLAST of Cp4.1LG04g03710 vs. NCBI nr
Match: KAG7022841.1 (Fasciclin-like arabinogalactan protein 6 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 452 bits (1163), Expect = 1.02e-159
Identity = 240/244 (98.36%), Postives = 241/244 (98.77%), Query Frame = 0


Query: 1   MASTALLLLLL-PFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETK 60
           MASTALLLLLL PFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETK
Sbjct: 1   MASTALLLLLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETK 60

Query: 61  INTQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDL 120
           IN QLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDL
Sbjct: 61  INIQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDL 120

Query: 121 QTVSNPVRTLAGDWGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVEKVLLPEAL 180
           QTVSNPVRTLAGDWGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVE+VLLPEAL
Sbjct: 121 QTVSNPVRTLAGDWGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVEQVLLPEAL 180

Query: 181 FGDHPAAPPPKASGPASEKSPADSETPPKSDAAHSPADHKDAAPRNGVGLGLVLGFGLIA 240
           FGDHPAAPPPKASGPASEKSPAD ETPPKSDAAHSPADHKDAAPRNGVGLGLVLGFGLIA
Sbjct: 181 FGDHPAAPPPKASGPASEKSPADGETPPKSDAAHSPADHKDAAPRNGVGLGLVLGFGLIA 240

Query: 241 FSVL 243
           FSVL
Sbjct: 241 FSVL 244

[Close]

BLAST of Cp4.1LG04g03710 vs. NCBI nr
Match: XP_022988922.1 (fasciclin-like arabinogalactan protein 13 [Cucurbita maxima])

HSP 1 Score: 447 bits (1150), Expect = 9.12e-158
Identity = 237/243 (97.53%), Postives = 239/243 (98.35%), Query Frame = 0


Query: 1   MASTALLLLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETKI 60
           MASTAL LLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTT IRLLNETKI
Sbjct: 1   MASTAL-LLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTLIRLLNETKI 60

Query: 61  NTQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDLQ 120
           NTQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDLQ
Sbjct: 61  NTQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDLQ 120

Query: 121 TVSNPVRTLAGDWGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVEKVLLPEALF 180
           TVSNPVRTLAGDWGLNFTGQANQVNVSTGVVMVAVNNK+REQSPLSIYAVE+VLLPEALF
Sbjct: 121 TVSNPVRTLAGDWGLNFTGQANQVNVSTGVVMVAVNNKVREQSPLSIYAVEQVLLPEALF 180

Query: 181 GDHPAAPPPKASGPASEKSPADSETPPKSDAAHSPADHKDAAPRNGVGLGLVLGFGLIAF 240
           GDHPAAPPPKASGPASEKSPAD ETPPKSDAAHSPADHKDAAPRNGVGL LVLGFGLIAF
Sbjct: 181 GDHPAAPPPKASGPASEKSPADGETPPKSDAAHSPADHKDAAPRNGVGLELVLGFGLIAF 240

Query: 241 SVL 243
           SVL
Sbjct: 241 SVL 242

[Close]

BLAST of Cp4.1LG04g03710 vs. NCBI nr
Match: XP_008455488.1 (PREDICTED: fasciclin-like arabinogalactan protein 6 [Cucumis melo])

HSP 1 Score: 338 bits (866), Expect = 1.89e-114
Identity = 183/246 (74.39%), Postives = 211/246 (85.77%), Query Frame = 0


Query: 1   MASTALLLLLL-PFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETK 60
           MAS ALLLLLL PF LFS  TLAQTPAAPAPS PGP+N+TGIL +GGQF+TFIRLLN+++
Sbjct: 1   MASPALLLLLLLPFALFS-QTLAQTPAAPAPSPPGPINLTGILSQGGQFSTFIRLLNQSR 60

Query: 61  INTQLDNQLNNTP-QGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTD 120
           +  QLDNQLNN+  +G+TILAPTDN FN+L+ GALN L+DQ+K+QLLLYHVL KFYTLT+
Sbjct: 61  LIIQLDNQLNNSQGEGLTILAPTDNGFNALESGALNSLDDQQKSQLLLYHVLPKFYTLTE 120

Query: 121 LQTVSNPVRTLAGDWGLNFTGQAN--QVNVSTGVVMVAVNNKLREQSPLSIYAVEKVLLP 180
           LQT+SNPVRT AGDWGLNFTGQAN  QVNVSTGVV V +NNKLREQSPLS++ V+KVLLP
Sbjct: 121 LQTISNPVRTQAGDWGLNFTGQANSNQVNVSTGVVTVPINNKLREQSPLSVFVVDKVLLP 180

Query: 181 EALFGDHPAAPPPKASGPASEKSPADSETPPKSDAAHSPADHKDAAPRNGVGLGLVLGFG 240
           EALFG+H AAPPPKA  P ++K+P D ETPPKSDAA  PA+ K AA RNGVGLGL+L FG
Sbjct: 181 EALFGNHTAAPPPKAPAPGADKAPVDGETPPKSDAAKPPANDKGAAARNGVGLGLILSFG 240

Query: 241 LIAFSV 242
           LI  SV
Sbjct: 241 LIVISV 245

[Close]

BLAST of Cp4.1LG04g03710 vs. ExPASy TrEMBL
Match: A0A6J1ES00 (fasciclin-like arabinogalactan protein 13 OS=Cucurbita moschata OX=3662 GN=LOC111437189 PE=3 SV=1)

HSP 1 Score: 454 bits (1169), Expect = 6.03e-161
Identity = 241/244 (98.77%), Postives = 242/244 (99.18%), Query Frame = 0


Query: 1   MASTALLLLLL-PFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETK 60
           MASTALLLLLL PFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETK
Sbjct: 1   MASTALLLLLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETK 60

Query: 61  INTQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDL 120
           INTQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDL
Sbjct: 61  INTQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDL 120

Query: 121 QTVSNPVRTLAGDWGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVEKVLLPEAL 180
           QTVSNPVRTLAGDWGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVE+VLLPEAL
Sbjct: 121 QTVSNPVRTLAGDWGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVEQVLLPEAL 180

Query: 181 FGDHPAAPPPKASGPASEKSPADSETPPKSDAAHSPADHKDAAPRNGVGLGLVLGFGLIA 240
           FGDHPAAPPPKASGPASEKSPAD ETPPKSDAAHSPADHKDAAPRNGVGLGLVLGFGLIA
Sbjct: 181 FGDHPAAPPPKASGPASEKSPADGETPPKSDAAHSPADHKDAAPRNGVGLGLVLGFGLIA 240

Query: 241 FSVL 243
           FSVL
Sbjct: 241 FSVL 244

[Close]

BLAST of Cp4.1LG04g03710 vs. ExPASy TrEMBL
Match: A0A6J1JED4 (fasciclin-like arabinogalactan protein 13 OS=Cucurbita maxima OX=3661 GN=LOC111486132 PE=3 SV=1)

HSP 1 Score: 447 bits (1150), Expect = 4.42e-158
Identity = 237/243 (97.53%), Postives = 239/243 (98.35%), Query Frame = 0


Query: 1   MASTALLLLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETKI 60
           MASTAL LLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTT IRLLNETKI
Sbjct: 1   MASTAL-LLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTLIRLLNETKI 60

Query: 61  NTQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDLQ 120
           NTQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDLQ
Sbjct: 61  NTQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDLQ 120

Query: 121 TVSNPVRTLAGDWGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVEKVLLPEALF 180
           TVSNPVRTLAGDWGLNFTGQANQVNVSTGVVMVAVNNK+REQSPLSIYAVE+VLLPEALF
Sbjct: 121 TVSNPVRTLAGDWGLNFTGQANQVNVSTGVVMVAVNNKVREQSPLSIYAVEQVLLPEALF 180

Query: 181 GDHPAAPPPKASGPASEKSPADSETPPKSDAAHSPADHKDAAPRNGVGLGLVLGFGLIAF 240
           GDHPAAPPPKASGPASEKSPAD ETPPKSDAAHSPADHKDAAPRNGVGL LVLGFGLIAF
Sbjct: 181 GDHPAAPPPKASGPASEKSPADGETPPKSDAAHSPADHKDAAPRNGVGLELVLGFGLIAF 240

Query: 241 SVL 243
           SVL
Sbjct: 241 SVL 242

[Close]

BLAST of Cp4.1LG04g03710 vs. ExPASy TrEMBL
Match: A0A1S3C1R5 (fasciclin-like arabinogalactan protein 6 OS=Cucumis melo OX=3656 GN=LOC103495639 PE=3 SV=1)

HSP 1 Score: 338 bits (866), Expect = 9.15e-115
Identity = 183/246 (74.39%), Postives = 211/246 (85.77%), Query Frame = 0


Query: 1   MASTALLLLLL-PFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETK 60
           MAS ALLLLLL PF LFS  TLAQTPAAPAPS PGP+N+TGIL +GGQF+TFIRLLN+++
Sbjct: 1   MASPALLLLLLLPFALFS-QTLAQTPAAPAPSPPGPINLTGILSQGGQFSTFIRLLNQSR 60

Query: 61  INTQLDNQLNNTP-QGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTD 120
           +  QLDNQLNN+  +G+TILAPTDN FN+L+ GALN L+DQ+K+QLLLYHVL KFYTLT+
Sbjct: 61  LIIQLDNQLNNSQGEGLTILAPTDNGFNALESGALNSLDDQQKSQLLLYHVLPKFYTLTE 120

Query: 121 LQTVSNPVRTLAGDWGLNFTGQAN--QVNVSTGVVMVAVNNKLREQSPLSIYAVEKVLLP 180
           LQT+SNPVRT AGDWGLNFTGQAN  QVNVSTGVV V +NNKLREQSPLS++ V+KVLLP
Sbjct: 121 LQTISNPVRTQAGDWGLNFTGQANSNQVNVSTGVVTVPINNKLREQSPLSVFVVDKVLLP 180

Query: 181 EALFGDHPAAPPPKASGPASEKSPADSETPPKSDAAHSPADHKDAAPRNGVGLGLVLGFG 240
           EALFG+H AAPPPKA  P ++K+P D ETPPKSDAA  PA+ K AA RNGVGLGL+L FG
Sbjct: 181 EALFGNHTAAPPPKAPAPGADKAPVDGETPPKSDAAKPPANDKGAAARNGVGLGLILSFG 240

Query: 241 LIAFSV 242
           LI  SV
Sbjct: 241 LIVISV 245

[Close]

BLAST of Cp4.1LG04g03710 vs. ExPASy TrEMBL
Match: A0A6J1C293 (fasciclin-like arabinogalactan protein 13 OS=Momordica charantia OX=3673 GN=LOC111007613 PE=3 SV=1)

HSP 1 Score: 333 bits (855), Expect = 4.32e-113
Identity = 180/243 (74.07%), Postives = 205/243 (84.36%), Query Frame = 0


Query: 2   ASTALLLLLLP-FLLFSVTTLAQ-TPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETK 61
           ++ A +LLLLP FLLFS TT+AQ +PAAPAPS  GP+NIT +L +GGQFTT IRLLNE+K
Sbjct: 3   SAAATVLLLLPLFLLFSQTTVAQPSPAAPAPSPAGPINITAVLAQGGQFTTLIRLLNESK 62

Query: 62  INTQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDL 121
           + TQL+NQLNNTPQGMTILAPTDNAFN+LKPGALNGLNDQ+KTQLLLYHVLT+FYT T+L
Sbjct: 63  LITQLENQLNNTPQGMTILAPTDNAFNNLKPGALNGLNDQQKTQLLLYHVLTQFYTSTEL 122

Query: 122 QTVSNPVRTLAGDWGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVEKVLLPEAL 181
            TVSNPVRTLAGDWGLNFTGQ NQVNVSTGVV V +NNKLREQSPLS++ V++VLLPEAL
Sbjct: 123 LTVSNPVRTLAGDWGLNFTGQGNQVNVSTGVVTVPINNKLREQSPLSVFEVDQVLLPEAL 182

Query: 182 FGDHPAAPPPKASGPASEKSPADSETPPKSDAAHSPADHKDAAPRNGVGLGLVLGFGLIA 241
           FG+  AAP PKA  P ++K+PAD E  PKSDAA  P+  K AA RNGVGLG V GF  I 
Sbjct: 183 FGNKTAAPAPKAPAPGADKAPADGEPQPKSDAAKPPSGDKGAAVRNGVGLGFVSGFVFIV 242

[Close]

BLAST of Cp4.1LG04g03710 vs. ExPASy TrEMBL
Match: A0A0A0K1Z9 (FAS1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G039260 PE=3 SV=1)

HSP 1 Score: 330 bits (847), Expect = 6.64e-112
Identity = 178/245 (72.65%), Postives = 206/245 (84.08%), Query Frame = 0


Query: 1   MASTALLLLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETKI 60
           MAS ALLLLLLPF LF   TLAQTPAAP PS PGP+N+TGIL +GGQF+TFIRLLNE+++
Sbjct: 1   MASAALLLLLLPFALFC-QTLAQTPAAPGPSPPGPINLTGILSEGGQFSTFIRLLNESRL 60

Query: 61  NTQLDNQLNNTPQG-MTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDL 120
            TQLDNQLNN+  G +TILAPTDN FNSL+PGALN L+DQ+K+QLLLYHVL KFYTL +L
Sbjct: 61  ITQLDNQLNNSQGGGLTILAPTDNGFNSLRPGALNALDDQQKSQLLLYHVLPKFYTLIEL 120

Query: 121 QTVSNPVRTLAGDWGLNFTGQAN--QVNVSTGVVMVAVNNKLREQSPLSIYAVEKVLLPE 180
           QTVSNPVRT AGDWGLNFTGQAN  QVNVSTG++   +NNKLREQSPLSI+ V++VLLP+
Sbjct: 121 QTVSNPVRTQAGDWGLNFTGQANSNQVNVSTGIITAPINNKLREQSPLSIFVVDQVLLPD 180

Query: 181 ALFGDHPAAPPPKASGPASEKSPADSETPPKSDAAHSPADHKDAAPRNGVGLGLVLGFGL 240
           ALFG+H AAPP KA  P ++K+P D ETPPKSDAA  PA+ K A  +NGVGLGL+L FGL
Sbjct: 181 ALFGNHTAAPP-KAPAPGTDKAPVDGETPPKSDAAKPPANDKSAVTKNGVGLGLILSFGL 240

Query: 241 IAFSV 242
           I  SV
Sbjct: 241 IVISV 243

[Close]

BLAST of Cp4.1LG04g03710 vs. TAIR 10
Match: AT5G44130.1 (FASCICLIN-like arabinogalactan protein 13 precursor )

HSP 1 Score: 214.5 bits (545), Expect = 9.2e-56
Identity = 131/253 (51.78%), Postives = 167/253 (66.01%), Query Frame = 0


Query: 1   MASTALLLLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETKI 60
           MA+T LLLLLL  +  S    AQ  AAPAP   GP+NIT ILEKGGQF T IRLLN T+I
Sbjct: 1   MATTPLLLLLLTAVFLSTEITAQR-AAPAPGPAGPINITAILEKGGQFVTLIRLLNTTQI 60

Query: 61  NTQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDLQ 120
             Q++ Q+N++ +GMT+LAPTDNAF +LKPG LN L+  ++ +L+LYHV  KFYTL DL 
Sbjct: 61  GNQINIQINSSSEGMTVLAPTDNAFQNLKPGTLNKLSPDDQVKLILYHVSPKFYTLEDLL 120

Query: 121 TVSNPVRTLA------GDWGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVEKVL 180
           +VSNPVRT A      G +GLNFTGQ NQVNVSTGVV   ++  LR++ PL++Y V+ VL
Sbjct: 121 SVSNPVRTQASGRDVGGVYGLNFTGQGNQVNVSTGVVETRLSTSLRQERPLAVYVVDMVL 180

Query: 181 LPEALFGDH---PAAPPPKASGPASEKSPADSETPPKSDAAHSPAD-HKDAAPRNGVGLG 240
           LPE +FG+    P APPPK+      KSP  S+    S  A +P++  K  +     GLG
Sbjct: 181 LPEEMFGERKISPMAPPPKS------KSPDVSDDSESSKKAAAPSESEKSGSGEMNTGLG 240

Query: 241 LVLGFGLIAFSVL 244
           L LG  ++    L
Sbjct: 241 LGLGLVVLCLKFL 246

[Close]

BLAST of Cp4.1LG04g03710 vs. TAIR 10
Match: AT1G03870.1 (FASCICLIN-like arabinoogalactan 9 )

HSP 1 Score: 201.8 bits (512), Expect = 6.2e-52
Identity = 123/254 (48.43%), Postives = 167/254 (65.75%), Query Frame = 0


Query: 1   MASTALL---LLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNE 60
           MA+T L    LLL+  +L +    AQ PAAPAP   GP+N+T ILEKGGQFTTFI LLN 
Sbjct: 1   MATTRLTLAPLLLIAAVLLATKATAQ-PAAPAPEPAGPINLTAILEKGGQFTTFIHLLNI 60

Query: 61  TKINTQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLT 120
           T++ +Q++ Q+N++ +GMT+ APTDNAF +LKPG LN L+  ++ +L+LYHV  K+Y++ 
Sbjct: 61  TQVGSQVNIQVNSSSEGMTVFAPTDNAFQNLKPGTLNQLSPDDQVKLILYHVSPKYYSMD 120

Query: 121 DLQTVSNPVRTLA-----GDWGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVEK 180
           DL +VSNPVRT A     G +GLNFTGQ NQ+NVSTG V   ++N LR+Q PL++Y V+ 
Sbjct: 121 DLLSVSNPVRTQASGRDNGVYGLNFTGQTNQINVSTGYVETRISNSLRQQRPLAVYVVDM 180

Query: 181 VLLPEALFGDH---PAAPPPKASGPASEKSPADSETPPKSDAAHSPADHKDAAPRNGVGL 240
           VLLP  +FG+H   P AP PK+      KS   ++    +  A SP+D K  +    VGL
Sbjct: 181 VLLPGEMFGEHKLSPIAPAPKS------KSGGVTDDSGSTKKAASPSD-KSGSGEKKVGL 240

Query: 241 GLVLGFGLIAFSVL 244
           G  LG  ++    L
Sbjct: 241 GFGLGLIVLCLKFL 246

[Close]

BLAST of Cp4.1LG04g03710 vs. TAIR 10
Match: AT2G20520.1 (FASCICLIN-like arabinogalactan 6 )

HSP 1 Score: 198.0 bits (502), Expect = 8.9e-51
Identity = 122/252 (48.41%), Postives = 161/252 (63.89%), Query Frame = 0


Query: 1   MASTALLLLLLPFLLFSVTTLAQTPAAPAPSS-PGPLNITGILEKGGQFTTFIRLLNETK 60
           M+S+    ++L   LF++  +   P APAP++   P+N+T ILE G QFTT I+LLN T+
Sbjct: 1   MSSSLFSYVVLLIFLFTIPYIQSQPTAPAPTTEKSPINLTAILEAGHQFTTLIQLLNTTQ 60

Query: 61  INTQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDL 120
           +  Q+  QLN++ QGMTI APTDNAFN LKPG LN L  Q++ QL+LYH++ K+Y+L+DL
Sbjct: 61  VGFQVSVQLNSSDQGMTIFAPTDNAFNKLKPGTLNSLTYQQQIQLMLYHIIPKYYSLSDL 120

Query: 121 QTVSNPVRTLA-----GDWGLNFTGQA--NQVNVSTGVVMVAVNNKLREQSPLSIYAVEK 180
              SNPVRT A     G +GLNFTGQA  NQVNVSTGVV   +NN LR+Q PL++Y V+ 
Sbjct: 121 LLASNPVRTQATGQDGGVFGLNFTGQAQSNQVNVSTGVVETRINNALRQQFPLAVYVVDS 180

Query: 181 VLLPEALFGDHPAAPPPKASGPASEKSPADSETPPKSDAAHSPADHKDAAPR-NGVGLGL 240
           VLLPE LFG      P  A  P S  S +D+++P   D      +HK A        LG+
Sbjct: 181 VLLPEELFG--TKTTPTGAPAPKSSTSSSDADSPAADD------EHKSAGSSVKRTSLGI 240

Query: 241 VLGFGLIAFSVL 244
           V+ F L   SV+
Sbjct: 241 VVSFALFCCSVI 244

[Close]

BLAST of Cp4.1LG04g03710 vs. TAIR 10
Match: AT5G03170.1 (FASCICLIN-like arabinogalactan-protein 11 )

HSP 1 Score: 169.1 bits (427), Expect = 4.4e-42
Identity = 108/229 (47.16%), Postives = 135/229 (58.95%), Query Frame = 0


Query: 10  LLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETKINTQLDNQLN 69
           L  F L   TT  Q   APAP   GP NIT ILEK GQFT FIRLL  T+ + Q++ QLN
Sbjct: 12  LFIFFLVIATTYGQ---APAPGPSGPTNITAILEKAGQFTLFIRLLKSTQASDQINTQLN 71

Query: 70  -NTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDLQTVSNPVRT 129
            ++  G+T+ APTDNAFNSLK G LN L+DQ+K QL+ +HVL    T+   QTVSNP+RT
Sbjct: 72  SSSSNGLTVFAPTDNAFNSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVSNPLRT 131

Query: 130 LAGD-----WGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVEKVLLPEALFGDH 189
            AGD     + LN T   NQVN++TGVV   V N +     L++Y V++VLLP A+FG  
Sbjct: 132 QAGDGQNGKFPLNITSSGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLLPLAMFGSS 191

Query: 190 PA-APPPKASGPASEKSPADSETPPKSDAAHSPADHKDAAPRNGVGLGL 232
            A AP P+  G  S+ S +        D      D  D A R G G G+
Sbjct: 192 VAPAPAPEKGGSVSKGSASG------GDDGGDSTDSSD-AERTGFGFGI 230

[Close]

BLAST of Cp4.1LG04g03710 vs. TAIR 10
Match: AT5G60490.1 (FASCICLIN-like arabinogalactan-protein 12 )

HSP 1 Score: 160.6 bits (405), Expect = 1.6e-39
Identity = 96/221 (43.44%), Postives = 135/221 (61.09%), Query Frame = 0


Query: 5   ALLLLLLPFLLFSVTT---LAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETKIN 64
           +L++LL   LL   TT   L+Q   A AP+ PGP N+T ILEK GQFT FIRLL  T + 
Sbjct: 4   SLIILLFTVLLLLTTTPGILSQPSPAVAPAPPGPTNVTKILEKAGQFTVFIRLLKSTGVA 63

Query: 65  TQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDLQT 124
            QL  QLNN+  G+TI AP+D++F  LK G LN L D+++ +L+ +HV+  + + ++ QT
Sbjct: 64  NQLYGQLNNSDNGITIFAPSDSSFTGLKAGTLNSLTDEQQVELIQFHVIPSYVSSSNFQT 123

Query: 125 VSNPVRTLAGD-----WGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVEKVLLP 184
           +SNP+RT AGD     + LN T   N VN+++GV    V+  +     L++Y V+KVLLP
Sbjct: 124 ISNPLRTQAGDSADGHFPLNVTTSGNTVNITSGVTNTTVSGNVYSDGQLAVYQVDKVLLP 183

Query: 185 EALFGDHPAAPPPKASGPASEKSPADSETPPKSDAAHSPAD 218
           + +F   P AP P  S   S+K   DS+    S +  SPAD
Sbjct: 184 QQVFDPRPPAPAPAPSVSKSKKKKDDSD----SSSDDSPAD 220

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g03710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFH6	1.3e-54	51.78	Fasciclin-like arabinogalactan protein 13 OS=Arabidopsis thaliana OX=3702 GN=FLA...	[more]
Q9ZWA8	8.7e-51	48.43	Fasciclin-like arabinogalactan protein 9 OS=Arabidopsis thaliana OX=3702 GN=FLA9...	[more]
Q9SIL7	1.3e-49	48.41	Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana OX=3702 GN=FLA6...	[more]
Q8LEJ6	6.3e-41	47.16	Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana OX=3702 GN=FLA...	[more]
Q8LEE9	2.2e-38	43.44	Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana OX=3702 GN=FLA...	[more]

BLAST of Cp4.1LG04g03710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023530327.1	1.16e-163	100.00	fasciclin-like arabinogalactan protein 13 [Cucurbita pepo subsp. pepo]	[more]
XP_022930821.1	1.25e-160	98.77	fasciclin-like arabinogalactan protein 13 [Cucurbita moschata] >KAG6589141.1 Fas...	[more]
KAG7022841.1	1.02e-159	98.36	Fasciclin-like arabinogalactan protein 6 [Cucurbita argyrosperma subsp. argyrosp...	[more]
XP_022988922.1	9.12e-158	97.53	fasciclin-like arabinogalactan protein 13 [Cucurbita maxima]	[more]
XP_008455488.1	1.89e-114	74.39	PREDICTED: fasciclin-like arabinogalactan protein 6 [Cucumis melo]	[more]

BLAST of Cp4.1LG04g03710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ES00	6.03e-161	98.77	fasciclin-like arabinogalactan protein 13 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1JED4	4.42e-158	97.53	fasciclin-like arabinogalactan protein 13 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A1S3C1R5	9.15e-115	74.39	fasciclin-like arabinogalactan protein 6 OS=Cucumis melo OX=3656 GN=LOC103495639...	[more]
A0A6J1C293	4.32e-113	74.07	fasciclin-like arabinogalactan protein 13 OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A0A0K1Z9	6.64e-112	72.65	FAS1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G039260 PE=3 S...	[more]

BLAST of Cp4.1LG04g03710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G44130.1	9.2e-56	51.78	FASCICLIN-like arabinogalactan protein 13 precursor	[more]
AT1G03870.1	6.2e-52	48.43	FASCICLIN-like arabinoogalactan 9	[more]
AT2G20520.1	8.9e-51	48.41	FASCICLIN-like arabinogalactan 6	[more]
AT5G03170.1	4.4e-42	47.16	FASCICLIN-like arabinogalactan-protein 11	[more]
AT5G60490.1	1.6e-39	43.44	FASCICLIN-like arabinogalactan-protein 12	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000782	FAS1 domain	SMART	SM00554	fasc_3	coord: 76..177 e-value: 5.9E-19 score: 79.0
IPR000782	FAS1 domain	PFAM	PF02469	Fasciclin	coord: 47..176 e-value: 1.6E-20 score: 73.6
IPR000782	FAS1 domain	PROSITE	PS50213	FAS1	coord: 35..174 score: 19.104607
IPR036378	FAS1 domain superfamily	GENE3D	2.30.180.10	FAS1 domain	coord: 18..177 e-value: 4.4E-21 score: 77.7
IPR036378	FAS1 domain superfamily	SUPERFAMILY	82153	FAS1 domain	coord: 30..177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 181..223
None	No IPR available	PANTHER	PTHR32077:SF54	FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 6	coord: 6..242
IPR045003	Fasciclin-like arabinogalactan protein, group A	PANTHER	PTHR32077	FASCICLIN-LIKE ARABINOGALACTAN PROTEIN	coord: 6..242

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g03710.1	Cp4.1LG04g03710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009834	plant-type secondary cell wall biogenesis
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane