Cp4.1LG04g03620 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GGCAACCAGTACGGGTGAAAAAAATTATTGAGCTGACAACTGAATGTGGTGACCCAATTTAATAGCTAATAATCTTGTAATTGTAATTTCGATTCCCAATACCCTTTGGAAGCCTCTGATGCACTTCTTACCCTCACCGACATAGCCTACAATTTCGTCCAAAGGCAGTCAAGAAAGCTCAAAGCCAGAGATTCCATGGCCTAAAAGAAACCTTAGCGACTAAGTACTAACCCCATAGCTTTTCAAAGATAAAGGGCAATCGCAATCCCCATTTCTTGGACTTTTGTTCCATTTCTTCACTCCCACGCAGCCCTGTTTCAAGAGAGAATGAGAGGGATCGGATTCTTCTGGTCATTCACTTTCTTGTTCTTGGTTTTGAGCTTGAGCTGCATCAATGGCGAGGACCCATATAGGTTTTATACATGGAATGTCACCTATGGTGACATTTGGCCTCTTGGAGTGAAGCAACAGGTATCATTTCTGTATCAATGTGGTACCCATTTCTTGTTTGGCTTGGAGATGTATGATACAAGAATCTTTGGTTGTGTTCTTGCTTTCTTTTTTTCAGGGTATTTTGATTAATGGGCAATTTCCAGGGCCACAGATTGAATCGGTTACCAATGAGAACTTGATTATCAATGTCTTCAATAGCTTGGATGAGCCTTTCCTGATCTCTTGGTTGGTTTTCTTTTGTTTACACTCTTCCATTTTTTGCTCATAACTTGTATGATGAAATGCCCACTTCCCTTTCTTGTTTGATTCATAGTTCTTTCATTGAACATCTAGGTGTTAATCCATAGTCTTCTTGTAACAACCCAAGTCTAAGCGTATCGCTAATAGATATTGTCCTCTTTGGTTCTTTAAAATACGTCTACTAGGCAGATGTTTCCACACCTCGAGTGTTTCGTTCTCCACCCCAATCGACGTGGGCTTTGTAATCGATCAGGTTTGAATCTTGAAAAGGGCTGACATGTTTGAAAAACGAAGCGTAGAATTGAATTGATCATTAATAGACTTGCACATTATTCTACAGAGTTTTTCGTGCAGTGAAATTATTACAACAGGAAATGAAAATTTGCCCAAGTGGGGATCAGGGGGAACACAGAACGGTGTCGTTTAGAGTCATTTGTTTTTACTGTAATAATTTAATGTTGGAAATATTTCATTTTTTTTTGTCCTGGGTTTTCCCAAAGTTAAAGTTGCTTAGTTCTGGACGTTTGTGACTTTGGGTTTGAACATTCTCGTTCTAATTACCTTTTGGGAGATCCCACGTCGGTTGGGCAGGAGAACAAAGCATTCTTTATAAGGGTGTGGAAACCTCTCTCCAACAGATGCGTTATGAAACCGTGAGGCTGACGGCGATACGTAATGGGCTGAAACAAACATGGAGCGGTGTGCCAGCGAGGACGCTGGGCCCCTAAGGGGAGTGGATTGTGAGATCTCACATCGGTTGGAGAGAAGAACGAAGCATTCTTTATAAGGATGCGGAAACCTCTCCCTAGTAGACGCGTTTTAAAAATGTGAGGCTGACGGTGATACGTAATGGGCTGAAACAGACATCGAGCGGTGTGCCAGCGAGGACGCTGGGCCCCCAAGGGGAGTGGATTGTGAGATCTCACATCGGTTGGAGAGAAGAACGAAGCATTCCTTATAAGGATACGAAAACCTCTCCCTAGTAGATGCGTTTTAAAGATGTGAGGCTGACGGTGATACATAATGGGTAACGAGTCAAAGCAGATAACAAATTTGTAGCTACTTTAGACCTTTGTCTTTACTTGCTATTCTGTGTAAACTGAATAGGAATGGGATTCAACAGAGAAGAAACTCTTGGCAGGATGGAGTTTATGGCACGAACTGCCCCATCCCACCGGGGAGGAATTTCACTTATGTTCTGCAAGTGAAAGATCAGATTGGTAGCTACTTCTACTTCCCTTCTTTGGCCTTCCACAAGGCTGCTGGTGCCTTTGGTGGCTTCAAAATTCAGAGCCGTTCTATAATTCCTGTCCCATTTGCTACTCCTGCTGGAGAATTTACTGTTCTGGCTGGCGATTGGTACTCAAAAAACCACACTGTAAGCTTTGTTTCCTGATTAAACAGTTTGAAGGTTATGCTGGAATGTCTTTTTCAATGGCTGTTTGAACATATGCTTGCAGGATTTGAGAGCCATTTTAGATGGTGGTAGTGATCTTCCTTTCCCTGATGGACTTCTCATCAATGGTCGTGGTCTAAATGGAAACACTTTCACTGTTGAACAAGGTACATTGTTATTAAGAATATAAACACGGTAACCGTTAACTGTAACAGTCCAAGCCCACCGCTAGTAGATATTGTTCTCTTTGAGCTTTCGCTCAAGGTTTTTAAAACGCGTCTTCTAGGAAGATGTTTTTACACCCATCCGATGTGGGATCTCATAATCCACTCCCTTGGGGCCTAGCGTCCTTGCTGGCACTCGTTCTCTTCTCCAATCGATGTGAAACCCCCCAATCCACCCCCCTTCAAGGCCAAGCGTCCTTGAGGGCATACCACCTCGTGTCCACCCTCTTTGGGCTCAGCCTCCTCACTGGCACATCGCCCGGTGCCTGGCTCTGATACCATTTGTAACAGTCCAAGCCTACAGCTAGCAGATACTGTTTTCATATTGTCTTCTTTGGCTTTTCCTTTCGGGCTTCTCCTCAGAGTTTTTAAAACGCGTTTGCTAGGGAGAGGTTTCCACACCCTTATAAGGATGTTTCGTTTTCCTCTCCAACCGATGTGGTATCTCATACTAACTGTTGCATAAATTGTCTTGCAGGCAAGACTTACAGGTTTCGGATATCGAATGTGGGGCTTATAACTGCTATTAATTTCAGAATACAAGGCCACAAAATGCTTCTGGTTGAGGTTGAAGGAACTCATACCCTCCAGAACACTTATGAATCCCTTGATATTCATCTTGGGCAATCCTACTCTGTCTTGGTTACAGCTGACCAGCCGCCACAAGATTACTACATTGTCGTATCTACGCGTTTTACGTCCCAAATTCTCACAACCACCTCCACTCTTCATTACAGTAATGCGGCAGCTAGTGTCTCTGGACCTCCTCCCGGTGGACCGACAATTCAAACTGATTGGTCACTCGAACAAGCCCGGTCTCTCAGGTATCTGCCTCTGTTTTAATGTTGTCTCCATTGCATTCTTGTAGTTAGCATGATGTATGCTGCTTCATTAGTTTTCTCAAATTAGATGTTTTGTTCTGTTTTCATAAGAGCGTGGCGTCTCCTTAGTAGATGCATTTTAAAATCTTGAGGGGAAGCCTAGAATGGAAAGCCCAAAGAGGACAATATATGTAGCGGTAGACTTGAACTGTTACAAATGGTATCAGAGCCAGGCACCAAGCGGTGTATCAGCGAGGACGCTGGACCTCCAAGGAGAGTGGATTATGAGATCCCACATTGGTTGGAGAGGGGAATGAAGCATTCCTTATAAGAATGTGGAATCCTCTCCCTAGTAGACGCGTTTTAGAACCTTGAGGGAAAGCCCAGAAAGAAAAGCCTAAAGAGGACAATATTTGTTAGCGGTGGACTTAGGCTATTACACTTTTACTCTGTTGTGCCATACTTACTCTGACTCGTCCTTAATTGAACCAGGCGTAATCTGACAGCAAACGGTCCAAGACCGAATCCCCAAGGTTCTTATCATTACGGATTAATCAATGTCACTCATACAATAAGGCTTCAAAGCACTGCTCCAATCATCAATGGCAAGCAAAGATATGCTGTCAACAGTGCGTCCTTCATTCCAGCTGATACTCCTCTTAAACTTGCTGACTATTACAAGATCTCTGGTGTGTTCTCTCTTGGAAGTATCCCTGACTATCCCACTGGTAGTGGTGCCTACCTTCAGACTTCTGTCATAGCTGCTGATTTTCGAGGCTACGCTGAGGTTGTATTTGAGAATCCTGAAGATACCGAGCAGTCATGGCACGTCGATGGACACAACTTCTTCGTCGTGGGGTACGTTTTTTTTTTTATGTTCATAATCCAACTTCGTTGAAAACCCGATTTCTTAAGCCAATTTGGTTCATATGTTTCAACGCTCATCAGGATGGACGGAGGAGAATGGACACCAGCCAGCAGATTGACTTACAATTTACGAGACACGATCTCTCGATGTACCGTTCAGGTAGCAGCCTAG GGCAACCAGTACGGGTGAAAAAAATTATTGAGCTGACAACTGAATGTGGTGACCCAATTTAATAGCTAATAATCTTGTAATTGTAATTTCGATTCCCAATACCCTTTGGAAGCCTCTGATGCACTTCTTACCCTCACCGACATAGCCTACAATTTCGTCCAAAGGCAGTCAAGAAAGCTCAAAGCCAGAGATTCCATGGCCTAAAAGAAACCTTAGCGACTAAGTACTAACCCCATAGCTTTTCAAAGATAAAGGGCAATCGCAATCCCCATTTCTTGGACTTTTGTTCCATTTCTTCACTCCCACGCAGCCCTGTTTCAAGAGAGAATGAGAGGGATCGGATTCTTCTGGTCATTCACTTTCTTGTTCTTGGTTTTGAGCTTGAGCTGCATCAATGGCGAGGACCCATATAGGTTTTATACATGGAATGTCACCTATGGTGACATTTGGCCTCTTGGAGTGAAGCAACAGGGTATTTTGATTAATGGGCAATTTCCAGGGCCACAGATTGAATCGGTTACCAATGAGAACTTGATTATCAATGTCTTCAATAGCTTGGATGAGCCTTTCCTGATCTCTTGGCGTAATCTGACAGCAAACGGTCCAAGACCGAATCCCCAAGGTTCTTATCATTACGGATTAATCAATGTCACTCATACAATAAGGCTTCAAAGCACTGCTCCAATCATCAATGGCAAGCAAAGATATGCTGTCAACAGTGCGTCCTTCATTCCAGCTGATACTCCTCTTAAACTTGCTGACTATTACAAGATCTCTGGTGTGTTCTCTCTTGGAAGTATCCCTGACTATCCCACTGGTAGTGGTGCCTACCTTCAGACTTCTGTCATAGCTGCTGATTTTCGAGGCTACGCTGAGGTTGTATTTGAGAATCCTGAAGATACCGAGCAGTCATGGCACGTCGATGGACACAACTTCTTCGTCGTGGGGATGGACGGAGGAGAATGGACACCAGCCAGCAGATTGACTTACAATTTACGAGACACGATCTCTCGATGTACCGTTCAGGTAGCAGCCTAG ATGAGAGGGATCGGATTCTTCTGGTCATTCACTTTCTTGTTCTTGGTTTTGAGCTTGAGCTGCATCAATGGCGAGGACCCATATAGGTTTTATACATGGAATGTCACCTATGGTGACATTTGGCCTCTTGGAGTGAAGCAACAGGGTATTTTGATTAATGGGCAATTTCCAGGGCCACAGATTGAATCGGTTACCAATGAGAACTTGATTATCAATGTCTTCAATAGCTTGGATGAGCCTTTCCTGATCTCTTGGCGTAATCTGACAGCAAACGGTCCAAGACCGAATCCCCAAGGTTCTTATCATTACGGATTAATCAATGTCACTCATACAATAAGGCTTCAAAGCACTGCTCCAATCATCAATGGCAAGCAAAGATATGCTGTCAACAGTGCGTCCTTCATTCCAGCTGATACTCCTCTTAAACTTGCTGACTATTACAAGATCTCTGGTGTGTTCTCTCTTGGAAGTATCCCTGACTATCCCACTGGTAGTGGTGCCTACCTTCAGACTTCTGTCATAGCTGCTGATTTTCGAGGCTACGCTGAGGTTGTATTTGAGAATCCTGAAGATACCGAGCAGTCATGGCACGTCGATGGACACAACTTCTTCGTCGTGGGGATGGACGGAGGAGAATGGACACCAGCCAGCAGATTGACTTACAATTTACGAGACACGATCTCTCGATGTACCGTTCAGGTAGCAGCCTAG MRGIGFFWSFTFLFLVLSLSCINGEDPYRFYTWNVTYGDIWPLGVKQQGILINGQFPGPQIESVTNENLIINVFNSLDEPFLISWRNLTANGPRPNPQGSYHYGLINVTHTIRLQSTAPIINGKQRYAVNSASFIPADTPLKLADYYKISGVFSLGSIPDYPTGSGAYLQTSVIAADFRGYAEVVFENPEDTEQSWHVDGHNFFVVGMDGGEWTPASRLTYNLRDTISRCTVQVAA Homology
BLAST of Cp4.1LG04g03620 vs. ExPASy Swiss-Prot
Match: Q00624 (L-ascorbate oxidase homolog OS=Brassica napus OX=3708 GN=Bp10 PE=2 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 2.2e-35 Identity = 76/152 (50.00%), Postives = 100/152 (65.79%), Query Frame = 0
HSP 2 Score: 100.9 bits (250), Expect = 2.0e-20 Identity = 47/88 (53.41%), Postives = 61/88 (69.32%), Query Frame = 0
BLAST of Cp4.1LG04g03620 vs. ExPASy Swiss-Prot
Match: Q8VXX5 (Monocopper oxidase-like protein SKS1 OS=Arabidopsis thaliana OX=3702 GN=SKS1 PE=2 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 1.6e-33 Identity = 76/184 (41.30%), Postives = 115/184 (62.50%), Query Frame = 0
HSP 2 Score: 77.8 bits (190), Expect = 1.8e-13 Identity = 37/77 (48.05%), Postives = 49/77 (63.64%), Query Frame = 0
BLAST of Cp4.1LG04g03620 vs. ExPASy Swiss-Prot
Match: Q9SU40 (Monocopper oxidase-like protein SKU5 OS=Arabidopsis thaliana OX=3702 GN=SKU5 PE=1 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 2.3e-32 Identity = 79/179 (44.13%), Postives = 108/179 (60.34%), Query Frame = 0
HSP 2 Score: 79.7 bits (195), Expect = 4.8e-14 Identity = 40/81 (49.38%), Postives = 50/81 (61.73%), Query Frame = 0
BLAST of Cp4.1LG04g03620 vs. ExPASy Swiss-Prot
Match: Q9FHN6 (Monocopper oxidase-like protein SKS2 OS=Arabidopsis thaliana OX=3702 GN=SKS2 PE=2 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 2.5e-31 Identity = 74/183 (40.44%), Postives = 113/183 (61.75%), Query Frame = 0
BLAST of Cp4.1LG04g03620 vs. ExPASy Swiss-Prot
Match: P29162 (L-ascorbate oxidase homolog OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 2.2e-30 Identity = 111/476 (23.32%), Postives = 153/476 (32.14%), Query Frame = 0
BLAST of Cp4.1LG04g03620 vs. NCBI nr
Match: KZM96521.1 (hypothetical protein DCAR_019763 [Daucus carota subsp. sativus]) HSP 1 Score: 391 bits (1005), Expect = 5.19e-135 Identity = 180/227 (79.30%), Postives = 205/227 (90.31%), Query Frame = 0
BLAST of Cp4.1LG04g03620 vs. NCBI nr
Match: XP_023531945.1 (L-ascorbate oxidase homolog [Cucurbita pepo subsp. pepo]) HSP 1 Score: 398 bits (1022), Expect = 4.41e-134 Identity = 234/474 (49.37%), Postives = 234/474 (49.37%), Query Frame = 0
BLAST of Cp4.1LG04g03620 vs. NCBI nr
Match: KAG6589160.1 (L-ascorbate oxidase-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 398 bits (1022), Expect = 4.41e-134 Identity = 234/474 (49.37%), Postives = 234/474 (49.37%), Query Frame = 0
BLAST of Cp4.1LG04g03620 vs. NCBI nr
Match: XP_022988735.1 (L-ascorbate oxidase homolog [Cucurbita maxima]) HSP 1 Score: 397 bits (1019), Expect = 1.26e-133 Identity = 233/474 (49.16%), Postives = 234/474 (49.37%), Query Frame = 0
BLAST of Cp4.1LG04g03620 vs. NCBI nr
Match: XP_022930723.1 (L-ascorbate oxidase homolog [Cucurbita moschata]) HSP 1 Score: 395 bits (1016), Expect = 3.57e-133 Identity = 233/474 (49.16%), Postives = 233/474 (49.16%), Query Frame = 0
BLAST of Cp4.1LG04g03620 vs. ExPASy TrEMBL
Match: A0A164ZWH5 (Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_019763 PE=3 SV=1) HSP 1 Score: 391 bits (1005), Expect = 2.51e-135 Identity = 180/227 (79.30%), Postives = 205/227 (90.31%), Query Frame = 0
BLAST of Cp4.1LG04g03620 vs. ExPASy TrEMBL
Match: A0A6J1JKE6 (L-ascorbate oxidase homolog OS=Cucurbita maxima OX=3661 GN=LOC111485985 PE=3 SV=1) HSP 1 Score: 397 bits (1019), Expect = 6.08e-134 Identity = 233/474 (49.16%), Postives = 234/474 (49.37%), Query Frame = 0
BLAST of Cp4.1LG04g03620 vs. ExPASy TrEMBL
Match: A0A6J1EW63 (L-ascorbate oxidase homolog OS=Cucurbita moschata OX=3662 GN=LOC111437116 PE=3 SV=1) HSP 1 Score: 395 bits (1016), Expect = 1.73e-133 Identity = 233/474 (49.16%), Postives = 233/474 (49.16%), Query Frame = 0
BLAST of Cp4.1LG04g03620 vs. ExPASy TrEMBL
Match: A0A0A0K1K9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G043570 PE=3 SV=1) HSP 1 Score: 380 bits (975), Expect = 1.89e-128 Identity = 210/384 (54.69%), Postives = 215/384 (55.99%), Query Frame = 0
BLAST of Cp4.1LG04g03620 vs. ExPASy TrEMBL
Match: A0A1S3C0H2 (L-ascorbate oxidase homolog OS=Cucumis melo OX=3656 GN=LOC103495602 PE=3 SV=1) HSP 1 Score: 358 bits (918), Expect = 1.30e-118 Identity = 213/469 (45.42%), Postives = 221/469 (47.12%), Query Frame = 0
BLAST of Cp4.1LG04g03620 vs. TAIR 10
Match: AT1G76160.1 (SKU5 similar 5 ) HSP 1 Score: 241.9 bits (616), Expect = 5.2e-64 Identity = 156/473 (32.98%), Postives = 188/473 (39.75%), Query Frame = 0
BLAST of Cp4.1LG04g03620 vs. TAIR 10
Match: AT4G22010.1 (SKU5 similar 4 ) HSP 1 Score: 238.0 bits (606), Expect = 7.5e-63 Identity = 154/465 (33.12%), Postives = 191/465 (41.08%), Query Frame = 0
BLAST of Cp4.1LG04g03620 vs. TAIR 10
Match: AT1G41830.1 (SKU5-similar 6 ) HSP 1 Score: 226.9 bits (577), Expect = 1.7e-59 Identity = 152/473 (32.14%), Postives = 180/473 (38.05%), Query Frame = 0
BLAST of Cp4.1LG04g03620 vs. TAIR 10
Match: AT1G21860.1 (SKU5 similar 7 ) HSP 1 Score: 224.2 bits (570), Expect = 1.1e-58 Identity = 150/462 (32.47%), Postives = 176/462 (38.10%), Query Frame = 0
BLAST of Cp4.1LG04g03620 vs. TAIR 10
Match: AT1G21850.1 (SKU5 similar 8 ) HSP 1 Score: 220.7 bits (561), Expect = 1.2e-57 Identity = 147/460 (31.96%), Postives = 177/460 (38.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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