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Cp4.1LG04g03420 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGCAGCTAAGTGGAATTTGATGCCTGTGCAACAGCATCGCGTCGTAGGCATTTCTGCGAAGAGTCTGAAATTGAATCGAGTATATATTTCCCTTGCCGGTGTGCACTGCTCATAATTTCCTGTCCGAGAGAGAAGATGAGCGAGGCAAGGCCTGTGAAAAGGAGGGAAAGTCCATGGGGGATGCCTGAGGGCGAGGATCGCCAGCCTAAGGCTCACAGATGCAACGACAGAGCGGAGGATGTCATTCAAGTAAACTTCCATTTCTTCGTGGTTTCTATGTTCATCAGCATTGCTTGCTTCTTTTTCCACATGATTTCATCTAGTCTTCTTCTTGCTCTTTAATTTCTTGTTTATTCCGATTTCGATTTGTTTCTAATGAACTGATTTGAGAAATGAATATCGAAATGATTCCGGAGTTTGTCGTCGCTAGGTAGGATGCGATTTATTTCAACGATCGTTTGAGTCGATAATGAAGCATTTTCTTCGATGTTCAGTTTCCTGATGGATTTGGATTATTACGTGTTTTTCCTGGGGGTTTTGGTTGTACATGGTATCGTTGATAAGTTTGGGAGTAAATTTGAGAAGTCGGAAGCAGGATGGATTTAGCGACTAGTATCTTAGAAATTATGGCTCTTAGGAACTAGGAGCATAAGAGCATCTCGTTTATGTTGACAGCAAAATTTCCGGAAGATAATTGCAGTATTTTGGATAGCAGTGAGGTTTACTTGTTAAATCTTTGGACGAAGCGAATGGCCAAGGAGATCGAAACGTGTGCGATGACTGGAAATAGTTATTCTGTTGGATTTTGTTTTGTCATTCGAACACTCTATGAATTTTATTCTTCAAAGTAAAGCTTTCAACGCAATGTTCCTCTTAGGTCTTCCTACAATTAGTTATATATTCTGGAAGAAAAGGAGAAATTAGAACTCCCGTTCGCCTCACGCATGTGCTTTCACCTCCAACAGGAAAGTACACAAATGTATTTGGTTGGAGAATATGACCTCCAATACTAGCGTTTGGTTTTCGTTTTTTGTAGTGCATGGAAATGTAAAAGATGATTATAGAGTTAAGGATTTCATGTATGGTTTAGATCGGATATTCAATAACTAAAACTATAATGTTCTCTGGAATTTCATTAGCATTTAATTCATCCTTGCTACAATAGTCTATCGTATTGCCAAGTAAGTTACTATGTCAAGTAGTTTTGAGTTTTGAATCGACTGTAATTTTTCAATATTTGTCTGTCTTCAATTATTTATTGTTGGAGGTTCTGGAGAAAAAAGAAAAAAACAATAGCTCTCACGAGGAAAATGTTTACTGAAATTCTTTACTTTTCCTTTGTCAATTGTTGTATTTCCTCATGTTCATTTTTTCCTGTTGTAACGGTGTTTTGGCAAGACAAGAGCCTTGTCTTGCTAAAACACCTTAGCCAGCTTGATTCGTAAGCGTTAGTTCCCTACTATTCTCAAGAACTTGACTACAAACAAAGATTCAATGCACATAGGTTTACCTCATAAGAAGAGAACTAACTATTTTAAAAGGGAAACACGCCTTTTGCATCCCTGCAGATCCACAATCTTAAATTTTCCACTAGGATACTAGTTAAACCCAAAACCCTTCTCTTAGGAAGATTGATTGGAAAACCAGACGACAGTGCAAAAGGCTTGACTAGGTTTAGAAGATTCATCACTTTTAGATTTGTTTTGTGGAGAATAAGAGGAAATTTTTTTTAATGGAATAATAGGATTTAAGATCTACTTTGGAAACTAGTTCTTTCTCTTGTCACCTTTTCTTGCCAACAACTTCATTAGTTATGAGAATAACGATTGACAATTGGTCTACCATAGATAAATGCTGATTTCGTAACTAACTTGGTGCAAGTGTTGATTTCTTTCAATCCCTCTTTTAACGCTTTAGCAAAAATGTCATTGACACGAGTGGTTAAGCTGATTGGTTGGCTTGGTAACAGTAATATATACAATATTGTCTCTTCTGGTGACCATACTTAAGATGTTTCATAAAAAGCTAATTGTAACACTAGCAATTCCCATAACAATTAACATTTGGAACACTCCACAAATCAGAAATGTTTCACTTCCTTTTTTGCAGACTTGAACCGAAAAACCATCAAATTTGAACTCATATAAGAAAATGCAGCACTAGCTTCCTCTTCTAAGTATGATATTTCTTATCAATTTTTGTTGAGCTAGAGCGCCACTGCCACTTTAATGGTCTAACCCAGTAGACATGAATCTGGAACCCTGTTTAGAGGAGAATAGCCTCCCATGAAAGAGATAAGCTCATAGGTAATTGCACTCTCATTCACAAGGCTTGATTAGATTCGTTTGAGGGGATATAAAAAATAAGGTTCTTCCTCCGGTTAATAACGTTATGGAATAAAGCATAGTTTATTTATTTCGGCTTGCATTTCTGTAGCCAAATCATAGTTTATTTCGGTTTGAAGAAGTTGAGAAAGAAGAAAGAGGGAGTATGATAAAACTTTTTTTTGTTTTTTTTTTTTTTTGTTGAATTTCTCAACCTAGGTACATGCCAGTTCAGTGAGGTTATCTCGCATGTACAAGAATGACCCCAACAATAGATTATATTCCAATGAAATGTATCCTCTTCAAGTTTTTGATTCTTTTTATTTTTTTTGGTGGAGGGTGTGTGAAGGTGGTGGAATATCCTGGATGACACTGATTATTGTTTTGTTCTTATTGTAGGCTTGTTTTGAGGGGAACCCATTTAAGACTGTTCCAGGGCCATTCAAGCTATTCTGGCGATGCATGCGTTCGAAACCTGGGTATGATTGCACCTTATCAGTTCTCTTTTGTTTATTTTCAAGATAGATTCATTCATTCGTCAGTATGAGGACTTAGCTTTACTTTTCAAGAAACCTCGCTGTGGAATTGGAAGAATGATCAAATCTTTCACCCGCTGGGTTTGAGTGTAGATAATTGAGACCCATAAGGATGAAATCTTGATCTTGAGTACCTTGCCCTTTCTGTTCGTATCCTTCATTCATGCCCTGCCATGTCTGAAATGTTGTGAGCTAATGGAGTCGCTTCTTTTCAACCGTTTTGAACTCATCAAATTTGTAAGAACAGTTTCTGAAAATAGTTTTTAGTAGAATCGAGAATAGAAACGACACGTTAAGCATAGTAGTGATAAACGAAAAGGCACGTGAATTTGATCAAGAAATGATTGTTTTATTTTCCATCATCAGAACTTTCTTTTTAGTTATCTCATAAATTGAACACTATTCCTACGTTTTAAGCCTGATAAACTAAGGAAGTTGGAGAAAATTCATTTGGCGTTGATAATAATCTTAATAAAATGCTACTCTCATATGTTATGGGGACCATGTGATTTCGTTTTGCAGGGAGGAACCAACGGAGCCATATACATATTTGGATTTGGATCCTCCAAAGAGAGAGGTGAAACTCGAGTAAGAACTCACTACGCATACTTTTAATTCATGAATGTTAGATTTTCAGTTTTGATATTTGTCTCTTCTTGTGAATTTTAAATCAGAACTCAGACGGTAGGTCATGCATTTAAATGGTTGATAGGAAAACGGCAATAATGATTACCGTGAAATAGCTCTGTGAGCTTTTCAACATTATTGAATATGACAGAATTGGGTACTGAGTGTTTTTATTTTTTGTCACATCGTACGACATTTTACGGCTAGCATAATAAATAGCTACTAACCTTGATAAGAA CGCAGCTAAGTGGAATTTGATGCCTGTGCAACAGCATCGCGTCGTAGGCATTTCTGCGAAGAGTCTGAAATTGAATCGAGTATATATTTCCCTTGCCGGTGTGCACTGCTCATAATTTCCTGTCCGAGAGAGAAGATGAGCGAGGCAAGGCCTGTGAAAAGGAGGGAAAGTCCATGGGGGATGCCTGAGGGCGAGGATCGCCAGCCTAAGGCTCACAGATGCAACGACAGAGCGGAGGATGTCATTCAAGCTTGTTTTGAGGGGAACCCATTTAAGACTGTTCCAGGGCCATTCAAGCTATTCTGGCGATGCATGCGTTCGAAACCTGGGGAGGAACCAACGGAGCCATATACATATTTGGATTTGGATCCTCCAAAGAGAGAGGTGAAACTCGAGTAAGAACTCACTACGCATACTTTTAATTCATGAATGTTAGATTTTCAGTTTTGATATTTGTCTCTTCTTGTGAATTTTAAATCAGAACTCAGACGGTAGGTCATGCATTTAAATGGTTGATAGGAAAACGGCAATAATGATTACCGTGAAATAGCTCTGTGAGCTTTTCAACATTATTGAATATGACAGAATTGGGTACTGAGTGTTTTTATTTTTTGTCACATCGTACGACATTTTACGGCTAGCATAATAAATAGCTACTAACCTTGATAAGAA ATGAGCGAGGCAAGGCCTGTGAAAAGGAGGGAAAGTCCATGGGGGATGCCTGAGGGCGAGGATCGCCAGCCTAAGGCTCACAGATGCAACGACAGAGCGGAGGATGTCATTCAAGCTTGTTTTGAGGGGAACCCATTTAAGACTGTTCCAGGGCCATTCAAGCTATTCTGGCGATGCATGCGTTCGAAACCTGGGGAGGAACCAACGGAGCCATATACATATTTGGATTTGGATCCTCCAAAGAGAGAGGTGAAACTCGAGTAA MSEARPVKRRESPWGMPEGEDRQPKAHRCNDRAEDVIQACFEGNPFKTVPGPFKLFWRCMRSKPGEEPTEPYTYLDLDPPKREVKLE Homology
BLAST of Cp4.1LG04g03420 vs. NCBI nr
Match: XP_023530195.1 (uncharacterized protein LOC111792833 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 190 bits (483), Expect = 3.64e-61 Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0
BLAST of Cp4.1LG04g03420 vs. NCBI nr
Match: XP_022930654.1 (uncharacterized protein LOC111437056 [Cucurbita moschata] >KAG7022871.1 hypothetical protein SDJN02_16607 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 189 bits (479), Expect = 1.48e-60 Identity = 86/87 (98.85%), Postives = 87/87 (100.00%), Query Frame = 0
BLAST of Cp4.1LG04g03420 vs. NCBI nr
Match: XP_022989030.1 (uncharacterized protein LOC111486214 [Cucurbita maxima]) HSP 1 Score: 186 bits (473), Expect = 1.22e-59 Identity = 84/87 (96.55%), Postives = 86/87 (98.85%), Query Frame = 0
BLAST of Cp4.1LG04g03420 vs. NCBI nr
Match: KAE8645744.1 (hypothetical protein Csa_020305 [Cucumis sativus]) HSP 1 Score: 184 bits (467), Expect = 1.01e-58 Identity = 83/87 (95.40%), Postives = 85/87 (97.70%), Query Frame = 0
BLAST of Cp4.1LG04g03420 vs. NCBI nr
Match: XP_031744505.1 (uncharacterized protein LOC105436076 [Cucumis sativus] >XP_031744506.1 uncharacterized protein LOC105436076 [Cucumis sativus]) HSP 1 Score: 184 bits (467), Expect = 1.10e-58 Identity = 83/87 (95.40%), Postives = 85/87 (97.70%), Query Frame = 0
BLAST of Cp4.1LG04g03420 vs. ExPASy TrEMBL
Match: A0A6J1ES33 (uncharacterized protein LOC111437056 OS=Cucurbita moschata OX=3662 GN=LOC111437056 PE=4 SV=1) HSP 1 Score: 189 bits (479), Expect = 7.19e-61 Identity = 86/87 (98.85%), Postives = 87/87 (100.00%), Query Frame = 0
BLAST of Cp4.1LG04g03420 vs. ExPASy TrEMBL
Match: A0A6J1JL87 (uncharacterized protein LOC111486214 OS=Cucurbita maxima OX=3661 GN=LOC111486214 PE=4 SV=1) HSP 1 Score: 186 bits (473), Expect = 5.92e-60 Identity = 84/87 (96.55%), Postives = 86/87 (98.85%), Query Frame = 0
BLAST of Cp4.1LG04g03420 vs. ExPASy TrEMBL
Match: A0A0A0K6V3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G044220 PE=4 SV=1) HSP 1 Score: 184 bits (467), Expect = 5.35e-59 Identity = 83/87 (95.40%), Postives = 85/87 (97.70%), Query Frame = 0
BLAST of Cp4.1LG04g03420 vs. ExPASy TrEMBL
Match: A0A1S3C116 (uncharacterized protein LOC103495588 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103495588 PE=4 SV=1) HSP 1 Score: 181 bits (459), Expect = 8.62e-58 Identity = 82/87 (94.25%), Postives = 84/87 (96.55%), Query Frame = 0
BLAST of Cp4.1LG04g03420 vs. ExPASy TrEMBL
Match: A0A6J1C410 (uncharacterized protein LOC111008041 OS=Momordica charantia OX=3673 GN=LOC111008041 PE=4 SV=1) HSP 1 Score: 180 bits (457), Expect = 1.64e-57 Identity = 82/87 (94.25%), Postives = 85/87 (97.70%), Query Frame = 0
BLAST of Cp4.1LG04g03420 vs. TAIR 10
Match: AT1G05205.1 (unknown protein; Has 44 Blast hits to 44 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 162.9 bits (411), Expect = 1.1e-40 Identity = 75/87 (86.21%), Postives = 80/87 (91.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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