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Cp4.1LG04g03370 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAATGAGCTCCTCAATTAGATCAGCTTGGGTTGTAGCTGCCAGTGTCGGCGTTGTTGAGGCCCTCAAGGATCAAGGGATTTGCCGGTGGAATAACGTCTTAAGATCGGCGCAATTCTACGCCAAAAACCATGTTGGGTCAGTTTCTCAGGCCAAGAAGTTTTCCTCCTCCGCCGCCGCCGCCGCCGTGGCTTCCGGCAAGCAGCAGAATCAGTCGGAGGAATCTCTGAGGACGGTCATGTACCTCAGCTGTTGGGGTCCTAATAATTGAACCGCCTCTGAGCTTCAAAGATACGCTTGAAAAACATTGAAATCGAGATTACGGCGGGACCGGCGGCGGTTCGAGCGGAGTGACACCGCCGGGCGCGGTGGTGGAGTTGTTGAGCTGATATAGATATTGATATGGTTTGGGGATGTTATTAATGGGATGCTTTGGGCGTTTGATTCGTATATGAACAATTGTAAAAGCAATTCCCCTTAGTTCTTGTTTCTTTATTAAATACAATTGATTCCTAATTTCTTTACATTACGACCTACCCGCTCGATCTAGATAACAATTTCAAAAGATTTGACCGATCCCATTCTCGGGGAGGGCTCAAATACACAAGGGGGCTCGAGTTTTTTTCTCGGGTTAGGGTTTCTTTCTCGATCTTTCCCTAATTCTAAATTCTAATCGTGTAGTGGATTCTACTTTAGTCAAGAGGTATGTGTAACGGAGGTAGGCCCTCTACGTTATTAATCCATTTAGGCTCGACTAGACACATGTGGATTTAGGAAACTTGGCTCGTGAATAGTTTCTTAATAATAGAATCTCTCTTGAAACACGGGAAAAAAATCATTGGCTTATCAAATTATCTATGAGCCATGAAAAAGATTCATCAAAAGACAGAAACAAGTCCATTATCTATTTTACGTCAAGTAATATGTGGAGTAACTCCCGATATAGCAGTAAAGGCAAGTCGTGTAAGTGGATCAACTCATCAAGTTCCGTAACCGCAAAGAACGGTTCGTTCTTTTTATTTCTCCTTATCCATAACCATAAGGGCTGGAAGTGGATTCATAAAACCTAGCTCGATTAGGAACACATGATCGAACTCGACAATAATTAATCTTAATTAATTTTAAATAAAATGAAAAAATGAGTGAGAAATGACAATAATACCCCTCCCGTACAATGTACCCTGTTTCACAAAGAGCGGCAGAATCCGCCAGTTTCAAGCCCAACTCCTCCGGTTTAGAAAGGCAGTTTCTCCTCAATAATTCCAACTTTACCCCTCACATTGCTGTCAAAAGAACCCGATTTCTAGGGGCAATCAAGTCCAAGAATCATTTACAACTTATTTATTATAATAATAACATAGCAAAGATTAGGATAAGAAATATAATCCTTGTCTCCATCGGTCACGTTTAGTTAATAAAGAAATTTCCTTTTCTACCCTTCTCTAGCTTCACTCGAGATAGGTATTACAAGGCCACGATCCAACAAATTAGATAGAAATCTCTAACTATTTCTACCCTTCGATATTACAAGGCCATGAACGACCCATATCCACTGCCACTAAATATTGTCTTCTTTGGATTTTCCCTTTCAAGCTCCCCTCAATGCTTTAAATCGCGTCTTCTAGAGGAGGTTTCCACACCCTTATAAATGGTGATTTGTTCCCCTCCCCAACCAATACCCGACCTCACAAAAGTAGACCCCACAAAATAAATAAATAAATAAATATATGGGAATTTAAAATAAAAAAGAAACCCATTTGAGAGGAGGAAATCAGCCGGTCGCGGCGGTTTACTCTCCTCGCTTCCCGGAATTCAAAACCACGTGCCCAGTGGAATTAAAGAAAAAAACCAGGGGCCTTTTTGGAATAATCTCTATAAAACTCTCAAAATATTCCAACATTTCAGAACAGAGACAGAACAGAGATGAGTTCATCAAGAACAGCTTGGGTTGTCGCCGCCAGTGTCGGAGTGGTGGAGGCTTTGAAAGATCAAGGGGTTTGCCGCTGGAATCATACAATTAGGTCGGTTCAGCAGTATGCTAAAAGCCATGCGAGATCTGCTTCGCAGGTCAAGAAGCTTTCTTCGCCGTCGTCTGCGGCGGTTTCCGACCAGAAATGGAAGCAGTCGCAGGAATCTCTGAGAACTGTCATGTTCTTGAGCTGTTGGGGTCCTAATAATTGACCCATCACCCCCAGATTGTTCTTCTTAGGAAAGCTTTTGATTGTATAAATTTCACTCAAAACATTTTTTATAAATTTTTATGAATAATTTTATTTTTTGTTTAAAATAATATTTAAAATTTTTAATATGATAAGTGTTGGTTGATAATTACATTTATAATGAGTAATTAATATCTTTTGTCTTCGTTGAATGGACCAACCTTATCCTCAAATTAAGAACGGGCCCACTTAATAGATTCGTTGTCGTGTCGCCATCTAATGGTCTAGATATTGTCATACGACAGAATTACTTCTCACTTCTAAGAGTAAAGACTATTCCCACCGACCAACACGAGTTATTCCATCATATTTTGTAAGAGATCACCCAACATAGAATTGATCCGAGTAAAGCACGTTCCGTTGTGGTATTTGATTCATTTATGTACCCCTCATTTACTCCGCACTATTTCTCGTGGGTACAAAAAGAATTCTCTTCTTTATAGATAATCTTTTTTGGGAGGAATAATATATATTATTTCTTTCTATATGCTCGACATAGTTAAGAACAGTAGGTTCTACCGTGCATATGCTGTAGTTCTTTTTGTTAAAAGAGAATTCATCGTATGATTCAGGATCTAAATCTGTTCTCTCGAGTAGCTCTTTCAGTGTAAGAGGATATTTTTAACTACACAATTATGAAATTTCGTCTTAGTTAAAAGTTTCGGGTTGAAGATTATAAAATATATGTGGTGCGGGTTCATCTCGCTCGACCAATTCGAGTGATGATGATGATGATGATTGTGAGATCCCACATCGATTGGAGGAGGAACGATGTATTCCTTATAAGGGTGCGGAAACCTCTCCATAGAAAACGCGTTTTAACACCTTAAGGCTGATGGCAATACTTAATAGGCCAAAACAGACAATATTTGCAGGCAGTAGACTTGGGGCTGTTACAAATGGTATCAGACAAGGTTCGAGCAGTGTGTCAGCGAGAACACTGGGGCTCAAGGGGAGTGGATTATGAGATCACACATCAGATCCTACATCAATTGAAGGGGGAACGAAACATTCTTTATAAGGGTGTGAGAATCTCTCCCTAGCCTACACATTTTAAAATCGTAAGACTAACAACAATACGTTACGGGCCAAAGCGGACAATATCTACTAGCGATGGGGTTCGGTTATTATAATGATGATGCTCGGAAATATGCTCACTGCTTGAGAGATTTCATTATAAAATGAAGACTCTCGAGTGAGTTTCACTCTCACGTCATAATCAAAAAGACGAGTAAAAGAAACATCAGATCTTATCCGAGGTGGAGTGTTTCGAAAATCGTTCAAATCGTTCAAATCGTTCAAATCGTTCAAATCGGTAGAGTTAGAGAAACACACAAACAAGACTACAAAATCAGTGGGTGAGAAGCGAGTGGTTTGCTTCTCATACTTTGGGCTCATCCTCAACCTAATTTCACAAAAATGATCCACATTTTCCCATTTTTACCCTCCACCCATCACCAACCTACACATCATCAACAAGGGCAATCCTGTCATTTCACATCAAGTGAAGAATCCACCACCTTGTACGAACTCAGTTTTTCAATGATTAGCCAGAGGTTTTCCCCATTCCACGTTCTCCAAAACACATCTATATAAACCAACCAAACCCTTTTAACCTTAATTTCATCAAACTGTACGACACAAACAAGAACAAGCAAAATGTGTAGCGGAAAATACTGGACGACGGCGGCGGCGGCGAGTATTGGGGCGGTGGAGGCGTTGAAAGACCAAGGCCATTTGTGCCGGTGGAATTCTGCTGTCCGGGCTCTGTCTCAGCCCAATAAACTTCCGCCGCCGCCCTCGTCGTCATCGTCGGCGGTTAGGGATTGTCGGGAAGAAGATCATAGTAAACCCAAGCAGTCCGAGGAATCTCTTAGAACTGTTATGTACTTGAGTTGTTGGGGTCCTTAT AAATGAGCTCCTCAATTAGATCAGCTTGGGTTGTAGCTGCCAGTGTCGGCGTTGTTGAGGCCCTCAAGGATCAAGGGATTTGCCGGTGGAATAACGTCTTAAGATCGGCGCAATTCTACGCCAAAAACCATGTTGGGTCAGTTTCTCAGGCCAAGAAGTTTTCCTCCTCCGCCGCCGCCGCCGCCGTGGCTTCCGGCAAGCAGCAGAATCAGTCGGAGGAATCTCTGAGGACGGTCATGTACCTCAGCTGTTGGGAGATGAGTTCATCAAGAACAGCTTGGGTTGTCGCCGCCAGTGTCGGAGTGGTGGAGGCTTTGAAAGATCAAGGGGTTTGCCGCTGGAATCATACAATTAGGTCGGTTCAGCAGTATGCTAAAAGCCATGCGAGATCTGCTTCGCAGGTCAAGAAGCTTTCTTCGCCGTCGTCTGCGGCGGTTTCCGACCAGAAATGGAAGCAGTCGCAGGAATCTCTGAGAACTGTCATCGGAAAATACTGGACGACGGCGGCGGCGGCGAGTATTGGGGCGGTGGAGGCGTTGAAAGACCAAGGCCATTTGTGCCGGTGGAATTCTGCTGTCCGGGCTCTGTCTCAGCCCAATAAACTTCCGCCGCCGCCCTCGTCGTCATCGTCGGCGGTTAGGGATTGTCGGGAAGAAGATCATAGTAAACCCAAGCAGTCCGAGGAATCTCTTAGAACTGTTATGTACTTGAGTTGTTGGGGTCCTTAT ATGAGCTCCTCAATTAGATCAGCTTGGGTTGTAGCTGCCAGTGTCGGCGTTGTTGAGGCCCTCAAGGATCAAGGGATTTGCCGGTGGAATAACGTCTTAAGATCGGCGCAATTCTACGCCAAAAACCATGTTGGGTCAGTTTCTCAGGCCAAGAAGTTTTCCTCCTCCGCCGCCGCCGCCGCCGTGGCTTCCGGCAAGCAGCAGAATCAGTCGGAGGAATCTCTGAGGACGGTCATGTACCTCAGCTGTTGGGAGATGAGTTCATCAAGAACAGCTTGGGTTGTCGCCGCCAGTGTCGGAGTGGTGGAGGCTTTGAAAGATCAAGGGGTTTGCCGCTGGAATCATACAATTAGGTCGGTTCAGCAGTATGCTAAAAGCCATGCGAGATCTGCTTCGCAGGTCAAGAAGCTTTCTTCGCCGTCGTCTGCGGCGGTTTCCGACCAGAAATGGAAGCAGTCGCAGGAATCTCTGAGAACTGTCATCGGAAAATACTGGACGACGGCGGCGGCGGCGAGTATTGGGGCGGTGGAGGCGTTGAAAGACCAAGGCCATTTGTGCCGGTGGAATTCTGCTGTCCGGGCTCTGTCTCAGCCCAATAAACTTCCGCCGCCGCCCTCGTCGTCATCGTCGGCGGTTAGGGATTGTCGGGAAGAAGATCATAGTAAACCCAAGCAGTCCGAGGAATCTCTTAGAACTGTTATGTACTTGAGTTGTTGGGGTCCTTAT MSSSIRSAWVVAASVGVVEALKDQGICRWNNVLRSAQFYAKNHVGSVSQAKKFSSSAAAAAVASGKQQNQSEESLRTVMYLSCWEMSSSRTAWVVAASVGVVEALKDQGVCRWNHTIRSVQQYAKSHARSASQVKKLSSPSSAAVSDQKWKQSQESLRTVIGKYWTTAAAASIGAVEALKDQGHLCRWNSAVRALSQPNKLPPPPSSSSSAVRDCREEDHSKPKQSEESLRTVMYLSCWGPY Homology
BLAST of Cp4.1LG04g03370 vs. NCBI nr
Match: KAG7022896.1 (hypothetical protein SDJN02_16632, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 439 bits (1130), Expect = 1.09e-154 Identity = 232/247 (93.93%), Postives = 239/247 (96.76%), Query Frame = 0
BLAST of Cp4.1LG04g03370 vs. NCBI nr
Match: KAE8645761.1 (hypothetical protein Csa_020242 [Cucumis sativus]) HSP 1 Score: 283 bits (724), Expect = 5.55e-93 Identity = 171/249 (68.67%), Postives = 188/249 (75.50%), Query Frame = 0
BLAST of Cp4.1LG04g03370 vs. NCBI nr
Match: KAG6738966.1 (hypothetical protein POTOM_058601 [Populus tomentosa]) HSP 1 Score: 223 bits (568), Expect = 1.41e-67 Identity = 149/272 (54.78%), Postives = 177/272 (65.07%), Query Frame = 0
BLAST of Cp4.1LG04g03370 vs. NCBI nr
Match: KAG6738967.1 (hypothetical protein POTOM_058602 [Populus tomentosa]) HSP 1 Score: 215 bits (547), Expect = 4.51e-65 Identity = 151/329 (45.90%), Postives = 183/329 (55.62%), Query Frame = 0
BLAST of Cp4.1LG04g03370 vs. NCBI nr
Match: KAF9661811.1 (hypothetical protein SADUNF_Sadunf19G0107700 [Salix dunnii]) HSP 1 Score: 202 bits (513), Expect = 4.96e-60 Identity = 146/318 (45.91%), Postives = 173/318 (54.40%), Query Frame = 0
BLAST of Cp4.1LG04g03370 vs. ExPASy TrEMBL
Match: A0A498IM36 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_003540 PE=4 SV=1) HSP 1 Score: 185 bits (469), Expect = 2.73e-54 Identity = 122/257 (47.47%), Postives = 160/257 (62.26%), Query Frame = 0
BLAST of Cp4.1LG04g03370 vs. ExPASy TrEMBL
Match: A0A1J7G8S9 (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_11743 PE=4 SV=1) HSP 1 Score: 181 bits (459), Expect = 4.30e-54 Identity = 104/166 (62.65%), Postives = 121/166 (72.89%), Query Frame = 0
BLAST of Cp4.1LG04g03370 vs. ExPASy TrEMBL
Match: A0A7J6HDV8 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_029428 PE=4 SV=1) HSP 1 Score: 183 bits (465), Expect = 3.01e-53 Identity = 130/313 (41.53%), Postives = 168/313 (53.67%), Query Frame = 0
BLAST of Cp4.1LG04g03370 vs. ExPASy TrEMBL
Match: A0A7J8UFF6 (Uncharacterized protein OS=Gossypium klotzschianum OX=34286 GN=Goklo_016724 PE=4 SV=1) HSP 1 Score: 178 bits (452), Expect = 1.38e-52 Identity = 106/196 (54.08%), Postives = 127/196 (64.80%), Query Frame = 0
BLAST of Cp4.1LG04g03370 vs. ExPASy TrEMBL
Match: A0A7J9FRS2 (Uncharacterized protein OS=Gossypium trilobum OX=34281 GN=Gotri_025581 PE=4 SV=1) HSP 1 Score: 176 bits (445), Expect = 5.62e-52 Identity = 105/165 (63.64%), Postives = 126/165 (76.36%), Query Frame = 0
BLAST of Cp4.1LG04g03370 vs. TAIR 10
Match: AT4G10270.1 (Wound-responsive family protein ) HSP 1 Score: 92.8 bits (229), Expect = 4.0e-19 Identity = 51/86 (59.30%), Postives = 64/86 (74.42%), Query Frame = 0
BLAST of Cp4.1LG04g03370 vs. TAIR 10
Match: AT4G10265.1 (Wound-responsive family protein ) HSP 1 Score: 90.1 bits (222), Expect = 2.6e-18 Identity = 50/83 (60.24%), Postives = 61/83 (73.49%), Query Frame = 0
BLAST of Cp4.1LG04g03370 vs. TAIR 10
Match: AT4G33560.1 (Wound-responsive family protein ) HSP 1 Score: 47.4 bits (111), Expect = 1.9e-05 Identity = 38/94 (40.43%), Postives = 49/94 (52.13%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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