Cp4.1LG04g03020 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG04g03020
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	expansin-B3-like
Location	Cp4.1LG04: 7401232 .. 7403104 (-)
RNA-Seq Expression	Cp4.1LG04g03020
Synteny	Cp4.1LG04g03020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACTGCCGGTGGGCCCATTTATTATTGATACCCATTGGCCCACCGTAATTAAACCAAAAAATGAGGGCAAAATCGTCATTTCGTACAAATAATATTATATTTACACACATTATAAAACCTTCTTTAATTCCAACTTCCTTGGCATCTCAAAAACTGTCGGCAGGGCGCTGTGGACCGACAACTACTTTTCCACTGTTTTTTTTCCCAACCTGGTAGTTCACGGCGTCGCCGCCGACTTACAACCACCGTCAACATGCAGCTCCGCCGTGGCCATGCTACATTTTCGTCTTGTGGGTACTTATGGAGTGGGATAATGTTGGTGAATATGGTCGTAATGGGGAAGTTTCTTCTCGTTGAATCAGCTCGGCCTCAAAACCGTACGTCAGCTTCTCATTGGCTCCCCGCCACCGCCACTTGGTACGGCAGCCCGGAAGGCGACGGCAGCGACGGTTGGTAAAATTAATTACTCAGTAATTTTTTAGAACCTAATTCAATTGCTAATTAAACTTTAATAGATTTTTACTCGAGAGAATTTTATTGATATTTTTTAGTCACGAACGTATGAATTTGAGTCGTAATTTTGGAGGCGTAATGGTTTCAGGTGGGGCATGTGGGTATGGTAGTTTGGTGGATGTGAAGCCATTTAAGGCAAGAGTTGGTGCAGTGAGCCCTGTCTTATTCAAGGACGGTGAAGGATGTGGCGCATGCTATAAAGTCCGTTGCTTGGACCGAACCATATGCTCCAAACGAGCCGTTACCATAATAGTCACCGACGAGTGTCCCGGTGGCTATTGCTCCAATGGTCGCACCCACTTTGATCTTAGTGGCGCCGCTTTCGGCCGCATGGCTGTCGCGGGTGCCCACAGCCGTCTTCGTGACCGAGGCAAACTCTCAGTCGCTTACCGACGGTAAAGTTCTAATCTTTTGATTAAAATTATAATATCTTAATTGAGCTATACTCATGTTGATACAAAATTTTTAACAGGACTCCATGTTTGTATCGTGGGAAGAACATAGCCTTCCATGTAAACGAAGGTTCTACCGATCATTGGCTCTCGCTTTTAGTCGAGTTCGAGGATGGTGATGGAGATATTGGTTCGATGCAAATCAAACAAGTAAGCTTTTAATATCTGATTATTTACGTGATTGTGATCTGTAACATTTATATTAAATCGTTTAATGTTTATACAAACATAATAAATGTAATAACTATAGTATAATAAACTATATATTATAATGGGGAGATGTATCCATGTGACAAAGGGGCCACAATAGAGAAAAAATATCAAATTCAAAAAAGGGTAAGAGACAACACATAGTGAGCACGTTGAAATATAATGATATAGTTTAATTTTGGGTTGTCGCCATCTCATTTTGACTTTAATATACTTAAAAACTATATATTAAAAAAAATACATTATAGTTTAATAACTTTAGCTCGATATGATATGATAACGATGTGCAGGCAAAGTCGAGCGAGTGGATGGAAATGGCACACGTGTGGGGGGCGACGTGGTGCATAAATGGAGGACCTTTAGAGGGGCCATTCTCGGTGAAGCTAACCACGTTATCCACTGCCAAGACTCTCTCGACTAGAGATGTTATCCCGAAGAATTGGTCACCAAAGGCTACTTATACTTCCCGCTTGAACTTTTTATAAGAAATTAATATTTTATTTTAAGAGAGAAAAAAAAATTAAATAATAGTAATAATAATGTTTGGGTATTATCGTTTAGAAGTGGTAGCCATCTCCAAAGGGAGAGAGAGCGTATGTATTTTTGTTTATGTCTGTGTTAATTTTACTATGCATTTATATATATATATATATTTAATTTTGTAATTATAGTTTCACTCGAGTACGTTGGTGTTGGCA

mRNA sequence

AACTGCCGGTGGGCCCATTTATTATTGATACCCATTGGCCCACCGTAATTAAACCAAAAAATGAGGGCAAAATCGTCATTTCGTACAAATAATATTATATTTACACACATTATAAAACCTTCTTTAATTCCAACTTCCTTGGCATCTCAAAAACTGTCGGCAGGGCGCTGTGGACCGACAACTACTTTTCCACTGTTTTTTTTCCCAACCTGGTAGTTCACGGCGTCGCCGCCGACTTACAACCACCGTCAACATGCAGCTCCGCCGTGGCCATGCTACATTTTCGTCTTGTGGGTACTTATGGAGTGGGATAATGTTGGTGAATATGGTCGTAATGGGGAAGTTTCTTCTCGTTGAATCAGCTCGGCCTCAAAACCGTACGTCAGCTTCTCATTGGCTCCCCGCCACCGCCACTTGGTACGGCAGCCCGGAAGGCGACGGCAGCGACGGTGGGGCATGTGGGTATGGTAGTTTGGTGGATGTGAAGCCATTTAAGGCAAGAGTTGGTGCAGTGAGCCCTGTCTTATTCAAGGACGGTGAAGGATGTGGCGCATGCTATAAAGTCCGTTGCTTGGACCGAACCATATGCTCCAAACGAGCCGTTACCATAATAGTCACCGACGAGTGTCCCGGTGGCTATTGCTCCAATGGTCGCACCCACTTTGATCTTAGTGGCGCCGCTTTCGGCCGCATGGCTGTCGCGGGTGCCCACAGCCGTCTTCGTGACCGAGGCAAACTCTCAGTCGCTTACCGACGGACTCCATGTTTGTATCGTGGGAAGAACATAGCCTTCCATGTAAACGAAGGTTCTACCGATCATTGGCTCTCGCTTTTAGTCGAGTTCGAGGATGGTGATGGAGATATTGGTTCGATGCAAATCAAACAAGCAAAGTCGAGCGAGTGGATGGAAATGGCACACGTGTGGGGGGCGACGTGGTGCATAAATGGAGGACCTTTAGAGGGGCCATTCTCGGTGAAGCTAACCACGTTATCCACTGCCAAGACTCTCTCGACTAGAGATGTTATCCCGAAGAATTGGTCACCAAAGGCTACTTATACTTCCCGCTTGAACTTTTTATAAGAAATTAATATTTTATTTTAAGAGAGAAAAAAAAATTAAATAATAGTAATAATAATGTTTGGGTATTATCGTTTAGAAGTGGTAGCCATCTCCAAAGGGAGAGAGAGCGTATGTATTTTTGTTTATGTCTGTGTTAATTTTACTATGCATTTATATATATATATATATTTAATTTTGTAATTATAGTTTCACTCGAGTACGTTGGTGTTGGCA

Coding sequence (CDS)

ATGCAGCTCCGCCGTGGCCATGCTACATTTTCGTCTTGTGGGTACTTATGGAGTGGGATAATGTTGGTGAATATGGTCGTAATGGGGAAGTTTCTTCTCGTTGAATCAGCTCGGCCTCAAAACCGTACGTCAGCTTCTCATTGGCTCCCCGCCACCGCCACTTGGTACGGCAGCCCGGAAGGCGACGGCAGCGACGGTGGGGCATGTGGGTATGGTAGTTTGGTGGATGTGAAGCCATTTAAGGCAAGAGTTGGTGCAGTGAGCCCTGTCTTATTCAAGGACGGTGAAGGATGTGGCGCATGCTATAAAGTCCGTTGCTTGGACCGAACCATATGCTCCAAACGAGCCGTTACCATAATAGTCACCGACGAGTGTCCCGGTGGCTATTGCTCCAATGGTCGCACCCACTTTGATCTTAGTGGCGCCGCTTTCGGCCGCATGGCTGTCGCGGGTGCCCACAGCCGTCTTCGTGACCGAGGCAAACTCTCAGTCGCTTACCGACGGACTCCATGTTTGTATCGTGGGAAGAACATAGCCTTCCATGTAAACGAAGGTTCTACCGATCATTGGCTCTCGCTTTTAGTCGAGTTCGAGGATGGTGATGGAGATATTGGTTCGATGCAAATCAAACAAGCAAAGTCGAGCGAGTGGATGGAAATGGCACACGTGTGGGGGGCGACGTGGTGCATAAATGGAGGACCTTTAGAGGGGCCATTCTCGGTGAAGCTAACCACGTTATCCACTGCCAAGACTCTCTCGACTAGAGATGTTATCCCGAAGAATTGGTCACCAAAGGCTACTTATACTTCCCGCTTGAACTTTTTATAA

Protein sequence

MQLRRGHATFSSCGYLWSGIMLVNMVVMGKFLLVESARPQNRTSASHWLPATATWYGSPEGDGSDGGACGYGSLVDVKPFKARVGAVSPVLFKDGEGCGACYKVRCLDRTICSKRAVTIIVTDECPGGYCSNGRTHFDLSGAAFGRMAVAGAHSRLRDRGKLSVAYRRTPCLYRGKNIAFHVNEGSTDHWLSLLVEFEDGDGDIGSMQIKQAKSSEWMEMAHVWGATWCINGGPLEGPFSVKLTTLSTAKTLSTRDVIPKNWSPKATYTSRLNFL

Homology

[Close]

BLAST of Cp4.1LG04g03020 vs. ExPASy Swiss-Prot
Match: Q9M0I2 (Expansin-B3 OS=Arabidopsis thaliana OX=3702 GN=EXPB3 PE=2 SV=2)

HSP 1 Score: 392.5 bits (1007), Expect = 3.9e-108
Identity = 182/257 (70.82%), Postives = 211/257 (82.10%), Query Frame = 0


Query: 20  IMLVNMVVMGKFLLVES--ARPQNRTSASHWLPATATWYGSPEGDGSDGGACGYGSLVDV 79
           +ML  + ++ + L+  S  A      S SHWLPA ATWYGSP GDGSDGGACGYG+LVDV
Sbjct: 6   VMLATLCIVLQLLIGSSALATTNRHVSNSHWLPAVATWYGSPNGDGSDGGACGYGTLVDV 65

Query: 80  KPFKARVGAVSPVLFKDGEGCGACYKVRCLDRTICSKRAVTIIVTDECPGGYCSNGRTHF 139
           KP  ARVGAV+P+LFK+GEGCGACYKVRCLD++ICS+RAVT+I+TDECPG  CS   THF
Sbjct: 66  KPLHARVGAVNPILFKNGEGCGACYKVRCLDKSICSRRAVTVIITDECPG--CSKTSTHF 125

Query: 140 DLSGAAFGRMAVAGAHSRLRDRGKLSVAYRRTPCLYRGKNIAFHVNEGSTDHWLSLLVEF 199
           DLSGA FGR+A+AG    LR+RG + V YRRT C YRGKNIAFHVNEGSTD WLSLLVEF
Sbjct: 126 DLSGAVFGRLAIAGESGPLRNRGLIPVIYRRTACKYRGKNIAFHVNEGSTDFWLSLLVEF 185

Query: 200 EDGDGDIGSMQIKQAKSSEWMEMAHVWGATWCINGGPLEGPFSVKLTTLSTAKTLSTRDV 259
           EDG+GDIGSM I+QA + EW+EM HVWGA WCI GGPL+GPFS+KLTTLS  KTLS  DV
Sbjct: 186 EDGEGDIGSMHIRQAGAREWLEMKHVWGANWCIIGGPLKGPFSIKLTTLSAGKTLSATDV 245

Query: 260 IPKNWSPKATYTSRLNF 275
           +P+NW+PKATY+SRLNF
Sbjct: 246 VPRNWAPKATYSSRLNF 260

[Close]

BLAST of Cp4.1LG04g03020 vs. ExPASy Swiss-Prot
Match: Q0DZ85 (Expansin-B16 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB16 PE=3 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 9.7e-107
Identity = 187/273 (68.50%), Postives = 213/273 (78.02%), Query Frame = 0


Query: 8   ATFSSCGYLWSGIMLVNMVVMGKFLLVESARPQNRTSASH------WLPATATWYGSPEG 67
           A FSS     S  ML+  V+    L            A+H      W PATATWYGS +G
Sbjct: 2   AAFSSSS---SAPMLIRSVLFVSLLSAAFVFDSGEAGAAHRVVDPEWHPATATWYGSADG 61

Query: 68  DGSDGGACGYGSLVDVKPFKARVGAVSPVLFKDGEGCGACYKVRCLDRTICSKRAVTIIV 127
           DGSDGGACGYG+LVDV P K RVGAVSPVLFK GEGCGACYKVRCLD +ICS+RAVT+IV
Sbjct: 62  DGSDGGACGYGTLVDVVPMKTRVGAVSPVLFKGGEGCGACYKVRCLDASICSRRAVTVIV 121

Query: 128 TDECPGGYCSNGRTHFDLSGAAFGRMAVAGAHSRLRDRGKLSVAYRRTPCLYRGKNIAFH 187
           TDECPGG C+ GRTHFDLSGAAF R+AVAG   +L++RG++SV YRRT C Y GKNIAFH
Sbjct: 122 TDECPGGVCAFGRTHFDLSGAAFARLAVAGHGGQLQNRGEISVVYRRTACKYGGKNIAFH 181

Query: 188 VNEGSTDHWLSLLVEFEDGDGDIGSMQIKQAKSSEWMEMAHVWGATWCINGGPLEGPFSV 247
           VNEGST  WLSLLVEFEDGDGDIGSMQ+KQA S++W +M H+WGATW +  GPL GPFSV
Sbjct: 182 VNEGSTTFWLSLLVEFEDGDGDIGSMQLKQANSAQWQDMKHIWGATWSLTPGPLVGPFSV 241

Query: 248 KLTTLSTAKTLSTRDVIPKNWSPKATYTSRLNF 275
           +LTTL+T +TLS +DVIPKNW+PKATYTSRLNF
Sbjct: 242 RLTTLTTRQTLSAQDVIPKNWTPKATYTSRLNF 271

[Close]

BLAST of Cp4.1LG04g03020 vs. ExPASy Swiss-Prot
Match: Q7X6J9 (Expansin-B17 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB17 PE=3 SV=2)

HSP 1 Score: 387.1 bits (993), Expect = 1.6e-106
Identity = 188/270 (69.63%), Postives = 212/270 (78.52%), Query Frame = 0


Query: 9   TFSSCGYLWSGIMLVNMVVMGKFLLVESARPQNRTSAS----HWLPATATWYGSPEGDGS 68
           +FS C  L   ++L+    +    L +  + ++  +A+     W PATATWYG  EGDGS
Sbjct: 8   SFSLCVLL---LLLLLAPPISASFLFDGGKSKSAAAAAAVDMEWRPATATWYGDAEGDGS 67

Query: 69  DGGACGYGSLVDVKPFKARVGAVSPVLFKDGEGCGACYKVRCLDRTICSKRAVTIIVTDE 128
            GGACGYGSLVDV P KARVG+VSPVLFKDGEGCGACYKV+CLD  ICS+RAVT+IVTDE
Sbjct: 68  TGGACGYGSLVDVVPMKARVGSVSPVLFKDGEGCGACYKVKCLDHGICSRRAVTVIVTDE 127

Query: 129 CPGGYCSNGRTHFDLSGAAFGRMAVAGAHSRLRDRGKLSVAYRRTPCLYRGKNIAFHVNE 188
           CPGG C+ GRTHFDLSGAAF RMAVAGA   LRDRG+LSV YRRT C Y GKNIAF VNE
Sbjct: 128 CPGGLCAFGRTHFDLSGAAFSRMAVAGAGGHLRDRGQLSVVYRRTACKYGGKNIAFRVNE 187

Query: 189 GSTDHWLSLLVEFEDGDGDIGSMQIKQAKSSEWMEMAHVWGATWCINGGPLEGPFSVKLT 248
           GST+ WLSLLVEFEDG GDIGSMQIKQA S EW++M HVWGATWC+  GPL GPFSV+LT
Sbjct: 188 GSTNFWLSLLVEFEDGQGDIGSMQIKQANSVEWLDMKHVWGATWCLVRGPLVGPFSVRLT 247

Query: 249 TLSTAKTLSTRDVIPKNWSPKATYTSRLNF 275
           TLS  K L+ RDVIP+NW P ATYTSRLNF
Sbjct: 248 TLSAQKALTARDVIPRNWKPTATYTSRLNF 274

[Close]

BLAST of Cp4.1LG04g03020 vs. ExPASy Swiss-Prot
Match: Q9SKU2 (Expansin-B1 OS=Arabidopsis thaliana OX=3702 GN=EXPB1 PE=2 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 2.9e-103
Identity = 176/255 (69.02%), Postives = 204/255 (80.00%), Query Frame = 0


Query: 21  MLVNMVVMGKFLLVESARPQNRTSASHWLPATATWYGSPEGDGSDGGACGYGSLVDVKPF 80
           + +++++ G            + +A+ WLPATATWYGS EGDGS GGACGYGSLVDVKPF
Sbjct: 13  VFLHLLISGSGSTPPLTHSNQQVAATRWLPATATWYGSAEGDGSSGGACGYGSLVDVKPF 72

Query: 81  KARVGAVSPVLFKDGEGCGACYKVRCLDRTICSKRAVTIIVTDECPGGYCSNGR-THFDL 140
           KARVGAVSP+LFK GEGCGACYKVRCLD+TICSKRAVTII TD+ P G  +  + THFDL
Sbjct: 73  KARVGAVSPILFKGGEGCGACYKVRCLDKTICSKRAVTIIATDQSPSGPSAKAKHTHFDL 132

Query: 141 SGAAFGRMAVAGAHSRLRDRGKLSVAYRRTPCLYRGKNIAFHVNEGSTDHWLSLLVEFED 200
           SGAAFG MA+ G +  +R+RG L++ YRRT C YRGKNIAFHVN GSTD+WLSLL+E+ED
Sbjct: 133 SGAAFGHMAIPGHNGVIRNRGLLNILYRRTACKYRGKNIAFHVNAGSTDYWLSLLIEYED 192

Query: 201 GDGDIGSMQIKQAKSSEWMEMAHVWGATWCINGGPLEGPFSVKLTTLSTAKTLSTRDVIP 260
           G+GDIGSM I+QA S EW+ M H+WGA WCI  GPL+GPFSVKLTTLS  KTLS  DVIP
Sbjct: 193 GEGDIGSMHIRQAGSKEWISMKHIWGANWCIVEGPLKGPFSVKLTTLSNNKTLSATDVIP 252

Query: 261 KNWSPKATYTSRLNF 275
            NW PKATYTSRLNF
Sbjct: 253 SNWVPKATYTSRLNF 267

[Close]

BLAST of Cp4.1LG04g03020 vs. ExPASy Swiss-Prot
Match: Q9SHY6 (Putative expansin-B2 OS=Arabidopsis thaliana OX=3702 GN=EXPB2 PE=3 SV=2)

HSP 1 Score: 244.2 bits (622), Expect = 1.7e-63
Identity = 113/234 (48.29%), Postives = 157/234 (67.09%), Query Frame = 0


Query: 43  TSASHWLPATATWYGSPEGDGSDGGACGYGSLVDVKPFKARVGAVSPVLFKDGEGCGACY 102
           TS S W  A +TWYG+P G GSDGGACGYG+ V   PF   V A  P LFK G+GCGACY
Sbjct: 42  TSDSDWSIAGSTWYGNPTGYGSDGGACGYGNAVAQPPFSKMVSAGGPSLFKSGKGCGACY 101

Query: 103 KVRCLDRTICSKRAVTIIVTDECPGGYCSNGRTHFDLSGAAFGRMAVAGAHSRLRDRGKL 162
           +V+C  ++ CSK  VT+++TDECPG  C     HFDLSG AFG MA++G  S+LR+ G+L
Sbjct: 102 QVKCTSKSACSKNPVTVVITDECPG--CVKESVHFDLSGTAFGAMAISGQDSQLRNVGEL 161

Query: 163 SVAYRRTPCLYRGKNIAFHVNEGSTDHWLSLLVEFEDGDGDIGSMQIKQA-KSSEWMEMA 222
            + Y++  C Y GK + F V++GS  +  ++LV + +GDG+IG +++KQA  S +W+ M+
Sbjct: 162 QILYKKVECNYIGKTVTFQVDKGSNANSFAVLVAYVNGDGEIGRIELKQALDSDKWLSMS 221

Query: 223 HVWGATWCIN-GGPLEGPFSVKLTTLSTAKTLSTRDVIPKNWSPKATYTSRLNF 275
             WGA W ++   PL  P S+++T+L + KT+   +VIP NW P A Y S +NF
Sbjct: 222 QSWGAVWKLDVSSPLRAPLSLRVTSLESGKTVVASNVIPANWQPGAIYKSNVNF 273

[Close]

BLAST of Cp4.1LG04g03020 vs. NCBI nr
Match: XP_023531295.1 (expansin-B3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 573 bits (1477), Expect = 1.46e-206
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0


Query: 1   MQLRRGHATFSSCGYLWSGIMLVNMVVMGKFLLVESARPQNRTSASHWLPATATWYGSPE 60
           MQLRRGHATFSSCGYLWSGIMLVNMVVMGKFLLVESARPQNRTSASHWLPATATWYGSPE
Sbjct: 1   MQLRRGHATFSSCGYLWSGIMLVNMVVMGKFLLVESARPQNRTSASHWLPATATWYGSPE 60

Query: 61  GDGSDGGACGYGSLVDVKPFKARVGAVSPVLFKDGEGCGACYKVRCLDRTICSKRAVTII 120
           GDGSDGGACGYGSLVDVKPFKARVGAVSPVLFKDGEGCGACYKVRCLDRTICSKRAVTII
Sbjct: 61  GDGSDGGACGYGSLVDVKPFKARVGAVSPVLFKDGEGCGACYKVRCLDRTICSKRAVTII 120

Query: 121 VTDECPGGYCSNGRTHFDLSGAAFGRMAVAGAHSRLRDRGKLSVAYRRTPCLYRGKNIAF 180
           VTDECPGGYCSNGRTHFDLSGAAFGRMAVAGAHSRLRDRGKLSVAYRRTPCLYRGKNIAF
Sbjct: 121 VTDECPGGYCSNGRTHFDLSGAAFGRMAVAGAHSRLRDRGKLSVAYRRTPCLYRGKNIAF 180

Query: 181 HVNEGSTDHWLSLLVEFEDGDGDIGSMQIKQAKSSEWMEMAHVWGATWCINGGPLEGPFS 240
           HVNEGSTDHWLSLLVEFEDGDGDIGSMQIKQAKSSEWMEMAHVWGATWCINGGPLEGPFS
Sbjct: 181 HVNEGSTDHWLSLLVEFEDGDGDIGSMQIKQAKSSEWMEMAHVWGATWCINGGPLEGPFS 240

Query: 241 VKLTTLSTAKTLSTRDVIPKNWSPKATYTSRLNFL 275
           VKLTTLSTAKTLSTRDVIPKNWSPKATYTSRLNFL
Sbjct: 241 VKLTTLSTAKTLSTRDVIPKNWSPKATYTSRLNFL 275

[Close]

BLAST of Cp4.1LG04g03020 vs. NCBI nr
Match: XP_022930751.1 (expansin-B3-like [Cucurbita moschata])

HSP 1 Score: 572 bits (1473), Expect = 5.93e-206
Identity = 274/275 (99.64%), Postives = 275/275 (100.00%), Query Frame = 0


Query: 1   MQLRRGHATFSSCGYLWSGIMLVNMVVMGKFLLVESARPQNRTSASHWLPATATWYGSPE 60
           MQLRRGHATFSSCGYLWSGIMLVNMVVMGKFLLVESARPQNRTSASHWLPATATWYGSPE
Sbjct: 1   MQLRRGHATFSSCGYLWSGIMLVNMVVMGKFLLVESARPQNRTSASHWLPATATWYGSPE 60

Query: 61  GDGSDGGACGYGSLVDVKPFKARVGAVSPVLFKDGEGCGACYKVRCLDRTICSKRAVTII 120
           GDGSDGGACGYGSLVDVKPFKARVGAVSPVLFKDGEGCGACYKVRCLDRTICSKRAVTII
Sbjct: 61  GDGSDGGACGYGSLVDVKPFKARVGAVSPVLFKDGEGCGACYKVRCLDRTICSKRAVTII 120

Query: 121 VTDECPGGYCSNGRTHFDLSGAAFGRMAVAGAHSRLRDRGKLSVAYRRTPCLYRGKNIAF 180
           VTDECPGGYCSNGRTHFDLSGAAFGRMAVAGAHSRLRDRG+LSVAYRRTPCLYRGKNIAF
Sbjct: 121 VTDECPGGYCSNGRTHFDLSGAAFGRMAVAGAHSRLRDRGELSVAYRRTPCLYRGKNIAF 180

Query: 181 HVNEGSTDHWLSLLVEFEDGDGDIGSMQIKQAKSSEWMEMAHVWGATWCINGGPLEGPFS 240
           HVNEGSTDHWLSLLVEFEDGDGDIGSMQIKQAKSSEWMEMAHVWGATWCINGGPLEGPFS
Sbjct: 181 HVNEGSTDHWLSLLVEFEDGDGDIGSMQIKQAKSSEWMEMAHVWGATWCINGGPLEGPFS 240

Query: 241 VKLTTLSTAKTLSTRDVIPKNWSPKATYTSRLNFL 275
           VKLTTLSTAKTLSTRDVIPKNWSPKATYTSRLNFL
Sbjct: 241 VKLTTLSTAKTLSTRDVIPKNWSPKATYTSRLNFL 275

[Close]

BLAST of Cp4.1LG04g03020 vs. NCBI nr
Match: XP_022988885.1 (expansin-B3-like [Cucurbita maxima])

HSP 1 Score: 558 bits (1439), Expect = 9.06e-201
Identity = 268/274 (97.81%), Postives = 270/274 (98.54%), Query Frame = 0


Query: 1   MQLRRGHATFSSCGYLWSGIMLVNMVVMGKFLLVESARPQNRTSASHWLPATATWYGSPE 60
           M LRRGHATFSSCGYLWSGIMLVNMVVMGKFLLVES R QNRTSASHWLPATATWYGSPE
Sbjct: 1   MLLRRGHATFSSCGYLWSGIMLVNMVVMGKFLLVESVRLQNRTSASHWLPATATWYGSPE 60

Query: 61  GDGSDGGACGYGSLVDVKPFKARVGAVSPVLFKDGEGCGACYKVRCLDRTICSKRAVTII 120
           GDGS+GGACGYGSLVDVKPFKARVGAVSPVLFKDGEGCGACYKVRCLDRTICSKRAVTII
Sbjct: 61  GDGSNGGACGYGSLVDVKPFKARVGAVSPVLFKDGEGCGACYKVRCLDRTICSKRAVTII 120

Query: 121 VTDECPGGYCSNGRTHFDLSGAAFGRMAVAGAHSRLRDRGKLSVAYRRTPCLYRGKNIAF 180
           VTDECPGGYCSNGRTHFDLSGAAFGRMAVAGAHSRLRDRG+LSV YRRTPCLYRGKNIAF
Sbjct: 121 VTDECPGGYCSNGRTHFDLSGAAFGRMAVAGAHSRLRDRGELSVTYRRTPCLYRGKNIAF 180

Query: 181 HVNEGSTDHWLSLLVEFEDGDGDIGSMQIKQAKSSEWMEMAHVWGATWCINGGPLEGPFS 240
           HVNEGSTDHWLSLLVEFEDGDGDIGSMQIKQAKSSEWMEMAHVWGATWCINGGPLEGPFS
Sbjct: 181 HVNEGSTDHWLSLLVEFEDGDGDIGSMQIKQAKSSEWMEMAHVWGATWCINGGPLEGPFS 240

Query: 241 VKLTTLSTAKTLSTRDVIPKNWSPKATYTSRLNF 274
           VKLTTLSTAKTLSTRDVIPKNWSPKATYTSRLNF
Sbjct: 241 VKLTTLSTAKTLSTRDVIPKNWSPKATYTSRLNF 274

[Close]

BLAST of Cp4.1LG04g03020 vs. NCBI nr
Match: XP_016901688.1 (PREDICTED: expansin-B3-like [Cucumis melo] >KAA0031580.1 expansin-B3-like [Cucumis melo var. makuwa] >QDL52555.1 expansin B1 [Cucumis melo] >TYK07032.1 expansin-B3-like [Cucumis melo var. makuwa])

HSP 1 Score: 497 bits (1279), Expect = 1.72e-176
Identity = 237/262 (90.46%), Postives = 251/262 (95.80%), Query Frame = 0


Query: 14  GYLWSGIMLVNMVVM-GKFLLVESARPQNRTSASHWLPATATWYGSPEGDGSDGGACGYG 73
           GYLW+ IMLV+ VV+ GKF+LVESA+  NRT+ASHWLPATATWYGSPEGDGSDGGACGYG
Sbjct: 6   GYLWNMIMLVSFVVVAGKFVLVESAQLPNRTTASHWLPATATWYGSPEGDGSDGGACGYG 65

Query: 74  SLVDVKPFKARVGAVSPVLFKDGEGCGACYKVRCLDRTICSKRAVTIIVTDECPGGYCSN 133
           SLVDVKPFKARVGAVSP+LFKDGEGCGACYKVRCLDR IC++RAVTIIVTDECPGGYCSN
Sbjct: 66  SLVDVKPFKARVGAVSPILFKDGEGCGACYKVRCLDRAICARRAVTIIVTDECPGGYCSN 125

Query: 134 GRTHFDLSGAAFGRMAVAGAHSRLRDRGKLSVAYRRTPCLYRGKNIAFHVNEGSTDHWLS 193
           GRTHFDLSGAAFGRMAVAGA SRLRDRG+L+VAYRRTPC YRGKNIAFHVNEGSTDHWLS
Sbjct: 126 GRTHFDLSGAAFGRMAVAGAGSRLRDRGELTVAYRRTPCRYRGKNIAFHVNEGSTDHWLS 185

Query: 194 LLVEFEDGDGDIGSMQIKQAKSSEWMEMAHVWGATWCINGGPLEGPFSVKLTTLSTAKTL 253
           LLVEFEDGDGDIGSMQI+QA S EWMEMAHVWGATWCINGGPL+GPFSVKLTTLSTAKTL
Sbjct: 186 LLVEFEDGDGDIGSMQIRQANSKEWMEMAHVWGATWCINGGPLKGPFSVKLTTLSTAKTL 245

Query: 254 STRDVIPKNWSPKATYTSRLNF 274
           S RDVIP+NWSPKATYTSRLNF
Sbjct: 246 SARDVIPRNWSPKATYTSRLNF 267

[Close]

BLAST of Cp4.1LG04g03020 vs. NCBI nr
Match: XP_038887454.1 (expansin-B3-like [Benincasa hispida])

HSP 1 Score: 496 bits (1278), Expect = 2.45e-176
Identity = 242/275 (88.00%), Postives = 254/275 (92.36%), Query Frame = 0


Query: 1   MQLRRGHATFSSCGYLWSGIMLVN-MVVMGKFLLVESARPQNRTSASHWLPATATWYGSP 60
           MQ+RRG        YLW+ IMLVN +VV+ KFLLVESA+  NRT ASHWLPATATWYGSP
Sbjct: 1   MQIRRG--------YLWNMIMLVNCVVVIRKFLLVESAQLPNRTLASHWLPATATWYGSP 60

Query: 61  EGDGSDGGACGYGSLVDVKPFKARVGAVSPVLFKDGEGCGACYKVRCLDRTICSKRAVTI 120
           EGDGSDGGACGYGSLVDVKPFKARVGAVSP+LFKDGEGCGACYKVRCLDR ICSKRAVTI
Sbjct: 61  EGDGSDGGACGYGSLVDVKPFKARVGAVSPILFKDGEGCGACYKVRCLDRAICSKRAVTI 120

Query: 121 IVTDECPGGYCSNGRTHFDLSGAAFGRMAVAGAHSRLRDRGKLSVAYRRTPCLYRGKNIA 180
           IVTDECPGGYC+NGRTHFDLSGAAFGRMAVAGA SRLRDRG+LSV YRRTPC YRGKNIA
Sbjct: 121 IVTDECPGGYCANGRTHFDLSGAAFGRMAVAGAGSRLRDRGELSVVYRRTPCRYRGKNIA 180

Query: 181 FHVNEGSTDHWLSLLVEFEDGDGDIGSMQIKQAKSSEWMEMAHVWGATWCINGGPLEGPF 240
           FHVNEGSTDHWLSLLVEFEDGDGDIGSMQIKQA S+EWMEMAHVWGATWC+NGGPL GPF
Sbjct: 181 FHVNEGSTDHWLSLLVEFEDGDGDIGSMQIKQANSNEWMEMAHVWGATWCMNGGPLVGPF 240

Query: 241 SVKLTTLSTAKTLSTRDVIPKNWSPKATYTSRLNF 274
           SVKLTTLSTAKTLS RDVIP+NWSPKATYTS+LNF
Sbjct: 241 SVKLTTLSTAKTLSARDVIPRNWSPKATYTSKLNF 267

[Close]

BLAST of Cp4.1LG04g03020 vs. ExPASy TrEMBL
Match: A0A6J1ERT2 (expansin-B3-like OS=Cucurbita moschata OX=3662 GN=LOC111437134 PE=3 SV=1)

HSP 1 Score: 572 bits (1473), Expect = 2.87e-206
Identity = 274/275 (99.64%), Postives = 275/275 (100.00%), Query Frame = 0


Query: 1   MQLRRGHATFSSCGYLWSGIMLVNMVVMGKFLLVESARPQNRTSASHWLPATATWYGSPE 60
           MQLRRGHATFSSCGYLWSGIMLVNMVVMGKFLLVESARPQNRTSASHWLPATATWYGSPE
Sbjct: 1   MQLRRGHATFSSCGYLWSGIMLVNMVVMGKFLLVESARPQNRTSASHWLPATATWYGSPE 60

Query: 61  GDGSDGGACGYGSLVDVKPFKARVGAVSPVLFKDGEGCGACYKVRCLDRTICSKRAVTII 120
           GDGSDGGACGYGSLVDVKPFKARVGAVSPVLFKDGEGCGACYKVRCLDRTICSKRAVTII
Sbjct: 61  GDGSDGGACGYGSLVDVKPFKARVGAVSPVLFKDGEGCGACYKVRCLDRTICSKRAVTII 120

Query: 121 VTDECPGGYCSNGRTHFDLSGAAFGRMAVAGAHSRLRDRGKLSVAYRRTPCLYRGKNIAF 180
           VTDECPGGYCSNGRTHFDLSGAAFGRMAVAGAHSRLRDRG+LSVAYRRTPCLYRGKNIAF
Sbjct: 121 VTDECPGGYCSNGRTHFDLSGAAFGRMAVAGAHSRLRDRGELSVAYRRTPCLYRGKNIAF 180

Query: 181 HVNEGSTDHWLSLLVEFEDGDGDIGSMQIKQAKSSEWMEMAHVWGATWCINGGPLEGPFS 240
           HVNEGSTDHWLSLLVEFEDGDGDIGSMQIKQAKSSEWMEMAHVWGATWCINGGPLEGPFS
Sbjct: 181 HVNEGSTDHWLSLLVEFEDGDGDIGSMQIKQAKSSEWMEMAHVWGATWCINGGPLEGPFS 240

Query: 241 VKLTTLSTAKTLSTRDVIPKNWSPKATYTSRLNFL 275
           VKLTTLSTAKTLSTRDVIPKNWSPKATYTSRLNFL
Sbjct: 241 VKLTTLSTAKTLSTRDVIPKNWSPKATYTSRLNFL 275

[Close]

BLAST of Cp4.1LG04g03020 vs. ExPASy TrEMBL
Match: A0A6J1JKU7 (expansin-B3-like OS=Cucurbita maxima OX=3661 GN=LOC111486106 PE=3 SV=1)

HSP 1 Score: 558 bits (1439), Expect = 4.39e-201
Identity = 268/274 (97.81%), Postives = 270/274 (98.54%), Query Frame = 0


Query: 1   MQLRRGHATFSSCGYLWSGIMLVNMVVMGKFLLVESARPQNRTSASHWLPATATWYGSPE 60
           M LRRGHATFSSCGYLWSGIMLVNMVVMGKFLLVES R QNRTSASHWLPATATWYGSPE
Sbjct: 1   MLLRRGHATFSSCGYLWSGIMLVNMVVMGKFLLVESVRLQNRTSASHWLPATATWYGSPE 60

Query: 61  GDGSDGGACGYGSLVDVKPFKARVGAVSPVLFKDGEGCGACYKVRCLDRTICSKRAVTII 120
           GDGS+GGACGYGSLVDVKPFKARVGAVSPVLFKDGEGCGACYKVRCLDRTICSKRAVTII
Sbjct: 61  GDGSNGGACGYGSLVDVKPFKARVGAVSPVLFKDGEGCGACYKVRCLDRTICSKRAVTII 120

Query: 121 VTDECPGGYCSNGRTHFDLSGAAFGRMAVAGAHSRLRDRGKLSVAYRRTPCLYRGKNIAF 180
           VTDECPGGYCSNGRTHFDLSGAAFGRMAVAGAHSRLRDRG+LSV YRRTPCLYRGKNIAF
Sbjct: 121 VTDECPGGYCSNGRTHFDLSGAAFGRMAVAGAHSRLRDRGELSVTYRRTPCLYRGKNIAF 180

Query: 181 HVNEGSTDHWLSLLVEFEDGDGDIGSMQIKQAKSSEWMEMAHVWGATWCINGGPLEGPFS 240
           HVNEGSTDHWLSLLVEFEDGDGDIGSMQIKQAKSSEWMEMAHVWGATWCINGGPLEGPFS
Sbjct: 181 HVNEGSTDHWLSLLVEFEDGDGDIGSMQIKQAKSSEWMEMAHVWGATWCINGGPLEGPFS 240

Query: 241 VKLTTLSTAKTLSTRDVIPKNWSPKATYTSRLNF 274
           VKLTTLSTAKTLSTRDVIPKNWSPKATYTSRLNF
Sbjct: 241 VKLTTLSTAKTLSTRDVIPKNWSPKATYTSRLNF 274

[Close]

BLAST of Cp4.1LG04g03020 vs. ExPASy TrEMBL
Match: A0A1S4E0D3 (Expansin B1 OS=Cucumis melo OX=3656 GN=LOC103495519 PE=2 SV=1)

HSP 1 Score: 497 bits (1279), Expect = 8.34e-177
Identity = 237/262 (90.46%), Postives = 251/262 (95.80%), Query Frame = 0


Query: 14  GYLWSGIMLVNMVVM-GKFLLVESARPQNRTSASHWLPATATWYGSPEGDGSDGGACGYG 73
           GYLW+ IMLV+ VV+ GKF+LVESA+  NRT+ASHWLPATATWYGSPEGDGSDGGACGYG
Sbjct: 6   GYLWNMIMLVSFVVVAGKFVLVESAQLPNRTTASHWLPATATWYGSPEGDGSDGGACGYG 65

Query: 74  SLVDVKPFKARVGAVSPVLFKDGEGCGACYKVRCLDRTICSKRAVTIIVTDECPGGYCSN 133
           SLVDVKPFKARVGAVSP+LFKDGEGCGACYKVRCLDR IC++RAVTIIVTDECPGGYCSN
Sbjct: 66  SLVDVKPFKARVGAVSPILFKDGEGCGACYKVRCLDRAICARRAVTIIVTDECPGGYCSN 125

Query: 134 GRTHFDLSGAAFGRMAVAGAHSRLRDRGKLSVAYRRTPCLYRGKNIAFHVNEGSTDHWLS 193
           GRTHFDLSGAAFGRMAVAGA SRLRDRG+L+VAYRRTPC YRGKNIAFHVNEGSTDHWLS
Sbjct: 126 GRTHFDLSGAAFGRMAVAGAGSRLRDRGELTVAYRRTPCRYRGKNIAFHVNEGSTDHWLS 185

Query: 194 LLVEFEDGDGDIGSMQIKQAKSSEWMEMAHVWGATWCINGGPLEGPFSVKLTTLSTAKTL 253
           LLVEFEDGDGDIGSMQI+QA S EWMEMAHVWGATWCINGGPL+GPFSVKLTTLSTAKTL
Sbjct: 186 LLVEFEDGDGDIGSMQIRQANSKEWMEMAHVWGATWCINGGPLKGPFSVKLTTLSTAKTL 245

Query: 254 STRDVIPKNWSPKATYTSRLNF 274
           S RDVIP+NWSPKATYTSRLNF
Sbjct: 246 SARDVIPRNWSPKATYTSRLNF 267

[Close]

BLAST of Cp4.1LG04g03020 vs. ExPASy TrEMBL
Match: A0A5A7SLH9 (Expansin-B3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003500 PE=3 SV=1)

HSP 1 Score: 497 bits (1279), Expect = 8.34e-177
Identity = 237/262 (90.46%), Postives = 251/262 (95.80%), Query Frame = 0


Query: 14  GYLWSGIMLVNMVVM-GKFLLVESARPQNRTSASHWLPATATWYGSPEGDGSDGGACGYG 73
           GYLW+ IMLV+ VV+ GKF+LVESA+  NRT+ASHWLPATATWYGSPEGDGSDGGACGYG
Sbjct: 6   GYLWNMIMLVSFVVVAGKFVLVESAQLPNRTTASHWLPATATWYGSPEGDGSDGGACGYG 65

Query: 74  SLVDVKPFKARVGAVSPVLFKDGEGCGACYKVRCLDRTICSKRAVTIIVTDECPGGYCSN 133
           SLVDVKPFKARVGAVSP+LFKDGEGCGACYKVRCLDR IC++RAVTIIVTDECPGGYCSN
Sbjct: 66  SLVDVKPFKARVGAVSPILFKDGEGCGACYKVRCLDRAICARRAVTIIVTDECPGGYCSN 125

Query: 134 GRTHFDLSGAAFGRMAVAGAHSRLRDRGKLSVAYRRTPCLYRGKNIAFHVNEGSTDHWLS 193
           GRTHFDLSGAAFGRMAVAGA SRLRDRG+L+VAYRRTPC YRGKNIAFHVNEGSTDHWLS
Sbjct: 126 GRTHFDLSGAAFGRMAVAGAGSRLRDRGELTVAYRRTPCRYRGKNIAFHVNEGSTDHWLS 185

Query: 194 LLVEFEDGDGDIGSMQIKQAKSSEWMEMAHVWGATWCINGGPLEGPFSVKLTTLSTAKTL 253
           LLVEFEDGDGDIGSMQI+QA S EWMEMAHVWGATWCINGGPL+GPFSVKLTTLSTAKTL
Sbjct: 186 LLVEFEDGDGDIGSMQIRQANSKEWMEMAHVWGATWCINGGPLKGPFSVKLTTLSTAKTL 245

Query: 254 STRDVIPKNWSPKATYTSRLNF 274
           S RDVIP+NWSPKATYTSRLNF
Sbjct: 246 SARDVIPRNWSPKATYTSRLNF 267

[Close]

BLAST of Cp4.1LG04g03020 vs. ExPASy TrEMBL
Match: A0A6J1D3U6 (expansin-B3-like OS=Momordica charantia OX=3673 GN=LOC111016782 PE=3 SV=1)

HSP 1 Score: 491 bits (1265), Expect = 1.27e-174
Identity = 237/274 (86.50%), Postives = 254/274 (92.70%), Query Frame = 0


Query: 1   MQLRRGHATFSSCGYLWSGIMLVNMVVMGKFLLVESARPQNRTSASHWLPATATWYGSPE 60
           MQLRRG + F     LW+ IM V+MV+MGKF LV+SAR +NRTSA HW PATATWYGSPE
Sbjct: 1   MQLRRGPSFFR----LWTVIMSVSMVMMGKFGLVQSARLRNRTSAPHWSPATATWYGSPE 60

Query: 61  GDGSDGGACGYGSLVDVKPFKARVGAVSPVLFKDGEGCGACYKVRCLDRTICSKRAVTII 120
           GDGSDGGACGYG+LVDVKPFKARVGAVSPVLFK+GEGCGACYKVRCLD TIC++RAVTII
Sbjct: 61  GDGSDGGACGYGNLVDVKPFKARVGAVSPVLFKNGEGCGACYKVRCLDPTICARRAVTII 120

Query: 121 VTDECPGGYCSNGRTHFDLSGAAFGRMAVAGAHSRLRDRGKLSVAYRRTPCLYRGKNIAF 180
           VTDECPGGYC++GRTHFDLSGAAFGRMAVAGA SRLR+RG+LS+ YRRTPC YRGKNIAF
Sbjct: 121 VTDECPGGYCASGRTHFDLSGAAFGRMAVAGAGSRLRNRGELSILYRRTPCTYRGKNIAF 180

Query: 181 HVNEGSTDHWLSLLVEFEDGDGDIGSMQIKQAKSSEWMEMAHVWGATWCINGGPLEGPFS 240
           HVNEGSTDHWLSLLVEFEDGDGDIGSMQIKQA S+EWMEM+HVWGATWCINGGPL GPFS
Sbjct: 181 HVNEGSTDHWLSLLVEFEDGDGDIGSMQIKQASSNEWMEMSHVWGATWCINGGPLRGPFS 240

Query: 241 VKLTTLSTAKTLSTRDVIPKNWSPKATYTSRLNF 274
           VKLTTLSTAKTLS RDVIPKNWSPKATYTSRLNF
Sbjct: 241 VKLTTLSTAKTLSARDVIPKNWSPKATYTSRLNF 270

[Close]

BLAST of Cp4.1LG04g03020 vs. TAIR 10
Match: AT4G28250.1 (expansin B3 )

HSP 1 Score: 392.5 bits (1007), Expect = 2.8e-109
Identity = 182/257 (70.82%), Postives = 211/257 (82.10%), Query Frame = 0


Query: 20  IMLVNMVVMGKFLLVES--ARPQNRTSASHWLPATATWYGSPEGDGSDGGACGYGSLVDV 79
           +ML  + ++ + L+  S  A      S SHWLPA ATWYGSP GDGSDGGACGYG+LVDV
Sbjct: 6   VMLATLCIVLQLLIGSSALATTNRHVSNSHWLPAVATWYGSPNGDGSDGGACGYGTLVDV 65

Query: 80  KPFKARVGAVSPVLFKDGEGCGACYKVRCLDRTICSKRAVTIIVTDECPGGYCSNGRTHF 139
           KP  ARVGAV+P+LFK+GEGCGACYKVRCLD++ICS+RAVT+I+TDECPG  CS   THF
Sbjct: 66  KPLHARVGAVNPILFKNGEGCGACYKVRCLDKSICSRRAVTVIITDECPG--CSKTSTHF 125

Query: 140 DLSGAAFGRMAVAGAHSRLRDRGKLSVAYRRTPCLYRGKNIAFHVNEGSTDHWLSLLVEF 199
           DLSGA FGR+A+AG    LR+RG + V YRRT C YRGKNIAFHVNEGSTD WLSLLVEF
Sbjct: 126 DLSGAVFGRLAIAGESGPLRNRGLIPVIYRRTACKYRGKNIAFHVNEGSTDFWLSLLVEF 185

Query: 200 EDGDGDIGSMQIKQAKSSEWMEMAHVWGATWCINGGPLEGPFSVKLTTLSTAKTLSTRDV 259
           EDG+GDIGSM I+QA + EW+EM HVWGA WCI GGPL+GPFS+KLTTLS  KTLS  DV
Sbjct: 186 EDGEGDIGSMHIRQAGAREWLEMKHVWGANWCIIGGPLKGPFSIKLTTLSAGKTLSATDV 245

Query: 260 IPKNWSPKATYTSRLNF 275
           +P+NW+PKATY+SRLNF
Sbjct: 246 VPRNWAPKATYSSRLNF 260

[Close]

BLAST of Cp4.1LG04g03020 vs. TAIR 10
Match: AT4G28250.2 (expansin B3 )

HSP 1 Score: 376.7 bits (966), Expect = 1.6e-104
Identity = 178/257 (69.26%), Postives = 207/257 (80.54%), Query Frame = 0


Query: 20  IMLVNMVVMGKFLLVES--ARPQNRTSASHWLPATATWYGSPEGDGSDGGACGYGSLVDV 79
           +ML  + ++ + L+  S  A      S SHWLPA ATWYGSP GDGSDGGACGYG+LVDV
Sbjct: 6   VMLATLCIVLQLLIGSSALATTNRHVSNSHWLPAVATWYGSPNGDGSDGGACGYGTLVDV 65

Query: 80  KPFKARVGAVSPVLFKDGEGCGACYKVRCLDRTICSKRAVTIIVTDECPGGYCSNGRTHF 139
           KP  ARVGAV+P+LFK+GEGCGACYKVRCLD++ICS+RAVT+I+TDECPG  CS   THF
Sbjct: 66  KPLHARVGAVNPILFKNGEGCGACYKVRCLDKSICSRRAVTVIITDECPG--CSKTSTHF 125

Query: 140 DLSGAAFGRMAVAGAHSRLRDRGKLSVAYRRTPCLYRGKNIAFHVNEGSTDHWLSLLVEF 199
           DLSGA FGR+A+AG    LR+RG + V YR      RGKNIAFHVNEGSTD WLSLLVEF
Sbjct: 126 DLSGAVFGRLAIAGESGPLRNRGLIPVIYR------RGKNIAFHVNEGSTDFWLSLLVEF 185

Query: 200 EDGDGDIGSMQIKQAKSSEWMEMAHVWGATWCINGGPLEGPFSVKLTTLSTAKTLSTRDV 259
           EDG+GDIGSM I+QA + EW+EM HVWGA WCI GGPL+GPFS+KLTTLS  KTLS  DV
Sbjct: 186 EDGEGDIGSMHIRQAGAREWLEMKHVWGANWCIIGGPLKGPFSIKLTTLSAGKTLSATDV 245

Query: 260 IPKNWSPKATYTSRLNF 275
           +P+NW+PKATY+SRLNF
Sbjct: 246 VPRNWAPKATYSSRLNF 254

[Close]

BLAST of Cp4.1LG04g03020 vs. TAIR 10
Match: AT2G20750.1 (expansin B1 )

HSP 1 Score: 376.3 bits (965), Expect = 2.1e-104
Identity = 176/255 (69.02%), Postives = 204/255 (80.00%), Query Frame = 0


Query: 21  MLVNMVVMGKFLLVESARPQNRTSASHWLPATATWYGSPEGDGSDGGACGYGSLVDVKPF 80
           + +++++ G            + +A+ WLPATATWYGS EGDGS GGACGYGSLVDVKPF
Sbjct: 13  VFLHLLISGSGSTPPLTHSNQQVAATRWLPATATWYGSAEGDGSSGGACGYGSLVDVKPF 72

Query: 81  KARVGAVSPVLFKDGEGCGACYKVRCLDRTICSKRAVTIIVTDECPGGYCSNGR-THFDL 140
           KARVGAVSP+LFK GEGCGACYKVRCLD+TICSKRAVTII TD+ P G  +  + THFDL
Sbjct: 73  KARVGAVSPILFKGGEGCGACYKVRCLDKTICSKRAVTIIATDQSPSGPSAKAKHTHFDL 132

Query: 141 SGAAFGRMAVAGAHSRLRDRGKLSVAYRRTPCLYRGKNIAFHVNEGSTDHWLSLLVEFED 200
           SGAAFG MA+ G +  +R+RG L++ YRRT C YRGKNIAFHVN GSTD+WLSLL+E+ED
Sbjct: 133 SGAAFGHMAIPGHNGVIRNRGLLNILYRRTACKYRGKNIAFHVNAGSTDYWLSLLIEYED 192

Query: 201 GDGDIGSMQIKQAKSSEWMEMAHVWGATWCINGGPLEGPFSVKLTTLSTAKTLSTRDVIP 260
           G+GDIGSM I+QA S EW+ M H+WGA WCI  GPL+GPFSVKLTTLS  KTLS  DVIP
Sbjct: 193 GEGDIGSMHIRQAGSKEWISMKHIWGANWCIVEGPLKGPFSVKLTTLSNNKTLSATDVIP 252

Query: 261 KNWSPKATYTSRLNF 275
            NW PKATYTSRLNF
Sbjct: 253 SNWVPKATYTSRLNF 267

[Close]

BLAST of Cp4.1LG04g03020 vs. TAIR 10
Match: AT1G65680.1 (expansin B2 )

HSP 1 Score: 244.2 bits (622), Expect = 1.2e-64
Identity = 113/234 (48.29%), Postives = 157/234 (67.09%), Query Frame = 0


Query: 43  TSASHWLPATATWYGSPEGDGSDGGACGYGSLVDVKPFKARVGAVSPVLFKDGEGCGACY 102
           TS S W  A +TWYG+P G GSDGGACGYG+ V   PF   V A  P LFK G+GCGACY
Sbjct: 42  TSDSDWSIAGSTWYGNPTGYGSDGGACGYGNAVAQPPFSKMVSAGGPSLFKSGKGCGACY 101

Query: 103 KVRCLDRTICSKRAVTIIVTDECPGGYCSNGRTHFDLSGAAFGRMAVAGAHSRLRDRGKL 162
           +V+C  ++ CSK  VT+++TDECPG  C     HFDLSG AFG MA++G  S+LR+ G+L
Sbjct: 102 QVKCTSKSACSKNPVTVVITDECPG--CVKESVHFDLSGTAFGAMAISGQDSQLRNVGEL 161

Query: 163 SVAYRRTPCLYRGKNIAFHVNEGSTDHWLSLLVEFEDGDGDIGSMQIKQA-KSSEWMEMA 222
            + Y++  C Y GK + F V++GS  +  ++LV + +GDG+IG +++KQA  S +W+ M+
Sbjct: 162 QILYKKVECNYIGKTVTFQVDKGSNANSFAVLVAYVNGDGEIGRIELKQALDSDKWLSMS 221

Query: 223 HVWGATWCIN-GGPLEGPFSVKLTTLSTAKTLSTRDVIPKNWSPKATYTSRLNF 275
             WGA W ++   PL  P S+++T+L + KT+   +VIP NW P A Y S +NF
Sbjct: 222 QSWGAVWKLDVSSPLRAPLSLRVTSLESGKTVVASNVIPANWQPGAIYKSNVNF 273

[Close]

BLAST of Cp4.1LG04g03020 vs. TAIR 10
Match: AT2G45110.1 (expansin B4 )

HSP 1 Score: 213.0 bits (541), Expect = 3.0e-55
Identity = 101/225 (44.89%), Postives = 141/225 (62.67%), Query Frame = 0


Query: 51  ATATWYGSPEGDGSDGGACGYGSLVDVKPFKARVGAVSPVLFKDGEGCGACYKVRCLDRT 110
           A  TWYG P G GS GGACGYGS V   P  A V A  P LF +G+GCG CY+V C+   
Sbjct: 36  AGVTWYGEPFGAGSTGGACGYGSAVANPPLYAMVSAGGPSLFNNGKGCGTCYQVVCIGHP 95

Query: 111 ICSKRAVTIIVTDECPGGYCSNGRTHFDLSGAAFGRMAVAGAHSRLRDRGKLSVAYRRTP 170
            CS   +T+ +TDECPGG C++   H DLSG A G +A  G   +LR  G + V Y+R  
Sbjct: 96  ACSGSPITVTITDECPGGPCASEPVHIDLSGKAMGALAKPGQADQLRSAGVIRVNYKRAA 155

Query: 171 CLYRGKNIAFHVNEGSTDHWLSLLVEFEDGDGDIGSMQIKQAKSSEWMEMAHVWGATWCI 230
           CLYRG NI F ++ G+  +++S +VE+E+GDGD+ +++I+ A  S ++ M  +  A W +
Sbjct: 156 CLYRGTNIVFRMDAGANPYYISFVVEYENGDGDLSNVEIQPAGGS-FISMQEMRSAVWKV 215

Query: 231 N-GGPLEGPFSVKLTTLSTAKTLSTRDVIPKNWSPKATYTSRLNF 275
           N G  L GPF+++LT+  + K +   +VIP NW P  +Y S +NF
Sbjct: 216 NSGSALRGPFNIRLTSGESHKVIVAYNVIPANWKPDESYRSIVNF 259

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g03020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M0I2	3.9e-108	70.82	Expansin-B3 OS=Arabidopsis thaliana OX=3702 GN=EXPB3 PE=2 SV=2	[more]
Q0DZ85	9.7e-107	68.50	Expansin-B16 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB16 PE=3 SV=1	[more]
Q7X6J9	1.6e-106	69.63	Expansin-B17 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB17 PE=3 SV=2	[more]
Q9SKU2	2.9e-103	69.02	Expansin-B1 OS=Arabidopsis thaliana OX=3702 GN=EXPB1 PE=2 SV=1	[more]
Q9SHY6	1.7e-63	48.29	Putative expansin-B2 OS=Arabidopsis thaliana OX=3702 GN=EXPB2 PE=3 SV=2	[more]

BLAST of Cp4.1LG04g03020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023531295.1	1.46e-206	100.00	expansin-B3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022930751.1	5.93e-206	99.64	expansin-B3-like [Cucurbita moschata]	[more]
XP_022988885.1	9.06e-201	97.81	expansin-B3-like [Cucurbita maxima]	[more]
XP_016901688.1	1.72e-176	90.46	PREDICTED: expansin-B3-like [Cucumis melo] >KAA0031580.1 expansin-B3-like [Cucum...	[more]
XP_038887454.1	2.45e-176	88.00	expansin-B3-like [Benincasa hispida]	[more]

BLAST of Cp4.1LG04g03020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ERT2	2.87e-206	99.64	expansin-B3-like OS=Cucurbita moschata OX=3662 GN=LOC111437134 PE=3 SV=1	[more]
A0A6J1JKU7	4.39e-201	97.81	expansin-B3-like OS=Cucurbita maxima OX=3661 GN=LOC111486106 PE=3 SV=1	[more]
A0A1S4E0D3	8.34e-177	90.46	Expansin B1 OS=Cucumis melo OX=3656 GN=LOC103495519 PE=2 SV=1	[more]
A0A5A7SLH9	8.34e-177	90.46	Expansin-B3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G0035...	[more]
A0A6J1D3U6	1.27e-174	86.50	expansin-B3-like OS=Momordica charantia OX=3673 GN=LOC111016782 PE=3 SV=1	[more]

BLAST of Cp4.1LG04g03020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28250.1	2.8e-109	70.82	expansin B3	[more]
AT4G28250.2	1.6e-104	69.26	expansin B3	[more]
AT2G20750.1	2.1e-104	69.02	expansin B1	[more]
AT1G65680.1	1.2e-64	48.29	expansin B2	[more]
AT2G45110.1	3.0e-55	44.89	expansin B4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005795	Major pollen allergen Lol pI	PRINTS	PR00829	LOLP1ALLERGN	coord: 148..163 score: 34.09 coord: 196..211 score: 39.2 coord: 246..263 score: 29.8 coord: 126..141 score: 39.2 coord: 86..97 score: 37.88 coord: 180..195 score: 50.57
IPR007118	Expansin/Lol pI	PRINTS	PR01225	EXPANSNFAMLY	coord: 47..62 score: 42.34 coord: 65..83 score: 39.74 coord: 159..175 score: 42.06 coord: 88..106 score: 50.66 coord: 217..231 score: 41.83 coord: 256..270 score: 34.33
IPR007112	Expansin/pollen allergen, DPBB domain	SMART	SM00837	dpbb_1	coord: 84..166 e-value: 9.7E-10 score: 48.4
IPR007112	Expansin/pollen allergen, DPBB domain	PROSITE	PS50842	EXPANSIN_EG45	coord: 66..176 score: 31.094267
IPR009009	RlpA-like protein, double-psi beta-barrel domain	PFAM	PF03330	DPBB_1	coord: 86..161 e-value: 2.5E-16 score: 59.7
IPR007117	Expansin, cellulose-binding-like domain	PFAM	PF01357	Expansin_C	coord: 178..259 e-value: 2.7E-26 score: 91.4
IPR007117	Expansin, cellulose-binding-like domain	PROSITE	PS50843	EXPANSIN_CBD	coord: 189..270 score: 22.418238
IPR036749	Expansin, cellulose-binding-like domain superfamily	GENE3D	2.60.40.760		coord: 173..275 e-value: 2.8E-32 score: 112.6
IPR036749	Expansin, cellulose-binding-like domain superfamily	SUPERFAMILY	49590	PHL pollen allergen	coord: 176..270
IPR036908	RlpA-like domain superfamily	GENE3D	2.40.40.10		coord: 33..171 e-value: 3.3E-44 score: 152.3
IPR036908	RlpA-like domain superfamily	SUPERFAMILY	50685	Barwin-like endoglucanases	coord: 42..175
None	No IPR available	PANTHER	PTHR31692:SF82	EXPANSIN-B17	coord: 41..274
None	No IPR available	PANTHER	PTHR31692	EXPANSIN-B3	coord: 41..274

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG04g03020.1	Cp4.1LG04g03020.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019953	sexual reproduction
biological_process	GO:0006949	syncytium formation
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane