Cp4.1LG04g02950 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG04g02950
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptionmultiprotein bridging factor 1B
LocationCp4.1LG04: 7535616 .. 7539797 (+)
RNA-Seq ExpressionCp4.1LG04g02950
SyntenyCp4.1LG04g02950
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGGTAAAATATCTAGTAACTCTGTATTTATTACCGCCAGGGGGCGTATGGGGATATATCGAGTTTTCGTTTCTATTTACTTTTCTCACTCATCTTCTAACCCTAAAGCTCGGCGGCAAATATTTTCCTACCGCACAGAGAGTTGCAGAAACAGGTAGAGGAGACGAAAATGTCTGGAATTGGACCCATTTCCCAGGATTGGGAACCTGTTGTCATCAGGAAGAAGGCTCCCAACGCCGCCGCCAAGAAGGACGAGAAAGCTGTGAACGCCGCCCGCCGCTCCGGTGCCGAGATCGAAACCTTAAAGAAATGTTTGCTCCTATTTCCAGTTCTCTTTTCTGTTTTATTTCTATTATTCATCATCAATCCTGCAACATTTCTTTTCCTTTCGTGTTTGTAGAATGAGTTTTGATCTTGAATTTAGATATATCATTATCGCGTTTTCTTTTTNATGGTGCTCGATTGTGGAAATTTGTTTATCGCTCTTTGATGTTCGCTCGAACTGATAGATGATGAACTAGTTCCGTTGTGATTTGTTTGTTGAAATTTGAAGTTATCATCGTTTTTTGAATACTGATTGTATTATGACTCGGGATACATGTATGAATAGATACATGTGTTGAATGGTCACTTGTAGATACATGTATAGAAATATGTATAAGTACACGTATGAATGGATACATGTAGGTTCATTGGTTCATATTTAAATAGGTGCATGACTTTTAGATAATGAACGGTTTACCTATATATATGTATGTTGGCATCGGTGGAAGAAGTAGAAAATCAATAAAGCATTCCTTCATAGTTTTACAAAGTTCTCTTCTCTCAAAGAATTCTACCAAATTTCTCTGTTGTCGTCAACCGGTTCATGTGTTCTAAAACTTCGTGTTGAAGGTAATATTATAAACATTCTAGAATAAATTAATTTAGCATATGTTTCAACAAGAACAGAAAAAAGAAAGAAAATCAGTTCACTTCAGATGAATTTCTTCATGGGATTTATCGAACATTGTTATCTGCAAAGGTCATAGAAGATCAAGTACAGAAGTTTGTATTCAGCCATTTATTCCCTTTTCTCCTTTAATTTTTTTCATGAAACCACTAAATTAAAGCTATTTTTTCCATATTGTGATTTGTTTTTACTTTCTTTCTTCAGCTAATGCTGGAACAAATAAAGCTGCCTCTAGCGGTACCAGTTTGAATACCAGGAAGTTGGATGATGAGACAGAAAATCTCTCTCGTGAGTACATTACATCTTAATGCCTTTTACAGATAAATGTAGGCGGCACTTTCCAACATTACATTATCCCTAGTTTTTTTTTATCTCTTTTGTGCAATTAGGGAATAGTAACCAATTCCCTAAATCTATGGAGTTCCCCCAAAAATTGATTTATCTTATTATTAATAACGACCCTCAGAAGTATAGAGCTAGAACACGACCCTCAGAAGTATAGAGCTAGAACACGACCCTCAGAAGTATAGAGCTAGAACACGACCCTCAGAAGTATAGAGCTAGAACACGACCCTCAGAAGTATAGAGCTAGAACACGACCCTCAGAAGTATAGAGCTAGAACACGACCCTCAGAAGTATAGAGCTAGAACACGACCCTCAGAAGTATAGAGCTAGAACACGACCCTCAGAAGTATAGAGCTAGAACACGACCCTCAGAAGTATAGAGCTAGAACACGACCCTCAGAAGTATAGAGCTAGAACACGACCCTCAAAAGTATAGAGCTAGAACACGACCCTCAGAAGTATAGAGCTAGAACACGACCCTCAGAAGTATAGAGCTAGAACGACCCTCAGAAGTTGCAAATACTAATTTATTAAGAATTTATCGGATTGAAGCTATAGCATCATCATTCGCAAGAATCGAAAGATCTGGGTCACAATTTGTATCAATTAAACAAATGGTTGGAATTCCCAACGTGATACATTATTGAAGATCCCGATATTCTTAATAGAAGACGATGAATCAACCTTAAATTTTGTGGTCTATTTTCTTACCTGACAATATTAATTTCTTGCTAGTGTTGAGATTTATTTTGTTCTCACTATTTTTATTGCGTTCATTATGTATGTATGCATGTATGTATGTATGTATGTTGACTTCAGAAGAGTATTTACTATGTGCTTAGAGAGCATTTCAAACTGTTATATAGATACTTTTAGGATAGTAGTTAGGAATTTCATGTTATGTTTCACTTTTTTAGTTTTCTTATGTGAATATCTGCAAATTATGTAATATTGAAATTTGGGAAGTATCTTTCATTGATTAGAATGTAATATACTTCGGTCCTCTGGGACTTGTTTAGCATTGGATGTTGCATAGGCTTAACGAAACCAAAAATGAAAATGAAACTTTTTGTAAAAGGGAAAATATTTTTGGAATTTATGGTCAAGTCCTTGTATCCCTTTTAACACTGTCACACTGTCATGCGAAGAAGCAAGTGTTTGTTAGTGTAACAGCTCAAGCCCAATGCTAGTAAATATTGTCTTCTTTGGACTTTTCCTTTCGGGCTTCCTCTCAAGGTTTTTAAAATGTGTTTGCTAGGGACAGGTTTCTACACCCTTATAAAGAATGCCCCGTTCCCCTCTCTAACCAACATGGGATCTCACAATCCACCCCCCTTTGGGTCCTAGCGTCCTCGTTGGCACACTACCCGATGTCTGGCTCTAATACCATTTGTAACAGCTCAAGCCCACCGCTAGATATTGTCCTTTTTGGGCCTTCCCTTTCGGGTTTATCCTCAAGGTTTTTAAAATGCCTTTGTTAGGAAGAGGTTATCACACCCTTATAAAGAATGTTTTGTACTCCTCTTCAATCGATGCGGAATCTCATAGTTAGCCTTAGTGTTGGTAGAAGATCAATCTACCTTCCAAACAATTTCTTGTTCCTTGAGTGGTAACGGTAACACTTAGGGACATACCTTCCCTTCCACCCTCCATGGTTCCATAATGAATTAAGATATATCTCCCTTGATATTTGATGGTACAATATCGTATAGAGAAGTTCGGAGCTTCTAAAATTCGCTTCAAACCATGAAGCACTTTCATTTCCTTTATTATTTTAGCTCATTTGATTCTTGGCTAATTGGAAGGCTTTTAAGCAATTTCCACTATTGTATATTAATGAAATATCATTTTCTTATTAGAAGAAAATAATTATAATTCTTTTTAACCTTTTATCATGTACCAAGATCAAGTTTCACAAAGTATACCTATAAATTAGTGAGTATTGTTAAACAACACTTTTGCTCTCGTAGTTTGTATTCAATCTTATACCGTATATCCTTTGTTTTTCTTTTAATCATCCTTTTAGCATTTTTTCAAGCTTGCTTGTCCTTTTGCTTATGGAAATTAATACGAGCCCAAACTCGTTGTGTCGTGGCTGCTTCTAGAACCTCAAGTTGAGAAACTGCAACGTCGAACCATGTCTCACATTGTGAATGCAAGCAATGCTGTGCGAGTTTAATCTTCGCTATAGACGATTTCTCCTTACTTGCTCTGGATTTATTATAGGAGCTAAACTAACATTTTGGTTTTGCTGCTCATCTACTTTAACCACAGATGAAAAGGTACCAACTGAGCTGAAGAAGGCCATTATGCAGGCTCGAACCGATAAGAAGCTCACTCAGTCTCAGCTTGCTCAAGTATGTATCATTTCTGTTCATGCTTTTGCCCACTTCATTTGCATTTTCTTACGAACCTTACCGACGCCTGCCCCGCACAGGCCATATTCTTCTTTGAGCTTGCTAACAGAGACGTGATGAGCTTTTGTTTGTTTGTTTTTGGCTTTTAGTTGATCAATGAGAAGCCACAAATCATTCAGGAGTACGAATCTGGCAAAGCCATTCCAAATCAACAAATAATCACCAAGCTTGAGAGAGCTCTTGGAACTAAGCTTCGTGGAAAAAAGTAGGAGGGCTTATTATTAGGCCCTTTGGTTATTATGTAAGTGGTGAATTTGGCTATAACAAGAGCTTTTGGCTTCAGATATTGTGTAGTGTGAATTGACTTTACTTTCATTTCTCATGAACACACTTACATTTTCAAGTCGTTTTTTGGGATTATACACTGCATGGTTTTCCATATATTTCCCCGTCTCTTGCTGTGACTTCTCTGTAAATTGCCTCTTAAATAGAAATAGAACCGTACGGGATAAGATGGTCTCTG

mRNA sequence

ATGAAGGGGGGCGTATGGGGATATATCGACTCGGCGGCAAATATTTTCCTACCGCACAGAGAGTTGCAGAAACAGGTAGAGGAGACGAAAATGTCTGGAATTGGACCCATTTCCCAGGATTGGGAACCTGTTGTCATCAGGAAGAAGGCTCCCAACGCCGCCGCCAAGAAGGACGAGAAAGCTGTGAACGCCGCCCGCCGCTCCGGTGCCGAGATCGAAACCTTAAAGAAATCTAATGCTGGAACAAATAAAGCTGCCTCTAGCGGTACCAGTTTGAATACCAGGAAGTTGGATGATGAGACAGAAAATCTCTCTCATGAAAAGGTACCAACTGAGCTGAAGAAGGCCATTATGCAGGCTCGAACCGATAAGAAGCTCACTCAGTCTCAGCTTGCTCAATTGATCAATGAGAAGCCACAAATCATTCAGGAGTACGAATCTGGCAAAGCCATTCCAAATCAACAAATAATCACCAAGCTTGAGAGAGCTCTTGGAACTAAGCTTCGTGGAAAAAAGTAGGAGGGCTTATTATTAGGCCCTTTGGTTATTATAAATAGAACCGTACGGGATAAGATGGTCTCTG

Coding sequence (CDS)

ATGAAGGGGGGCGTATGGGGATATATCGACTCGGCGGCAAATATTTTCCTACCGCACAGAGAGTTGCAGAAACAGGTAGAGGAGACGAAAATGTCTGGAATTGGACCCATTTCCCAGGATTGGGAACCTGTTGTCATCAGGAAGAAGGCTCCCAACGCCGCCGCCAAGAAGGACGAGAAAGCTGTGAACGCCGCCCGCCGCTCCGGTGCCGAGATCGAAACCTTAAAGAAATCTAATGCTGGAACAAATAAAGCTGCCTCTAGCGGTACCAGTTTGAATACCAGGAAGTTGGATGATGAGACAGAAAATCTCTCTCATGAAAAGGTACCAACTGAGCTGAAGAAGGCCATTATGCAGGCTCGAACCGATAAGAAGCTCACTCAGTCTCAGCTTGCTCAATTGATCAATGAGAAGCCACAAATCATTCAGGAGTACGAATCTGGCAAAGCCATTCCAAATCAACAAATAATCACCAAGCTTGAGAGAGCTCTTGGAACTAAGCTTCGTGGAAAAAAGTAG

Protein sequence

MKGGVWGYIDSAANIFLPHRELQKQVEETKMSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRSGAEIETLKKSNAGTNKAASSGTSLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKAIPNQQIITKLERALGTKLRGKK
Homology
[Close]
BLAST of Cp4.1LG04g02950 vs. ExPASy Swiss-Prot
Match: Q9SJI8 (Multiprotein-bridging factor 1a OS=Arabidopsis thaliana OX=3702 GN=MBF1A PE=2 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 2.5e-60
Identity = 122/142 (85.92%), Postives = 136/142 (95.77%), Query Frame = 0 

Query: 31  MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRSGAEIETLKKSNAGTNKAASSGT 90
           M+GIGPI+QDWEPVVIRKK  NAAAK+DEK VNAARRSGA+IET++K NAGTNKAASSGT
Sbjct: 1   MAGIGPITQDWEPVVIRKKPANAAAKRDEKTVNAARRSGADIETVRKFNAGTNKAASSGT 60

Query: 91  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 150
           SLNT+ LDD+TENL+HE+VPTELKKAIMQARTDKKLTQSQLAQ+INEKPQ+IQEYESGKA
Sbjct: 61  SLNTKMLDDDTENLTHERVPTELKKAIMQARTDKKLTQSQLAQIINEKPQVIQEYESGKA 120

Query: 151 IPNQQIITKLERALGTKLRGKK 173
           IPNQQI++KLERALG KLRGKK
Sbjct: 121 IPNQQILSKLERALGAKLRGKK 142

[Close]
BLAST of Cp4.1LG04g02950 vs. ExPASy Swiss-Prot
Match: Q9LXT3 (Multiprotein-bridging factor 1b OS=Arabidopsis thaliana OX=3702 GN=MBF1B PE=1 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 4.2e-60
Identity = 121/142 (85.21%), Postives = 137/142 (96.48%), Query Frame = 0 

Query: 31  MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRSGAEIETLKKSNAGTNKAASSGT 90
           M+GIGPI+QDWEPVVIRK+APNAAAK+DEK VNAARRSGA+IET++K NAG+NKAASSGT
Sbjct: 1   MAGIGPITQDWEPVVIRKRAPNAAAKRDEKTVNAARRSGADIETVRKFNAGSNKAASSGT 60

Query: 91  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 150
           SLNT+KLDD+TENLSH++VPTELKKAIMQAR +KKLTQSQLA LINEKPQ+IQEYESGKA
Sbjct: 61  SLNTKKLDDDTENLSHDRVPTELKKAIMQARGEKKLTQSQLAHLINEKPQVIQEYESGKA 120

Query: 151 IPNQQIITKLERALGTKLRGKK 173
           IPNQQI++KLERALG KLRGKK
Sbjct: 121 IPNQQILSKLERALGAKLRGKK 142

[Close]
BLAST of Cp4.1LG04g02950 vs. ExPASy Swiss-Prot
Match: Q9LV58 (Multiprotein-bridging factor 1c OS=Arabidopsis thaliana OX=3702 GN=MBF1C PE=1 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.9e-28
Identity = 66/139 (47.48%), Postives = 101/139 (72.66%), Query Frame = 0 

Query: 35  GPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRSGAEIETLKKSNAGTNKAASSGT--SL 94
           G ++QDWEPVV+ K    +   +D KAVNAA R+G  ++T+KK +AG+NK   S     +
Sbjct: 7   GAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKSTAVPVI 66

Query: 95  NTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKAIP 154
           NT+KL++ETE  + ++V  E++  I +AR +KK++Q+ LA+ INE+ Q++QEYE+GKA+P
Sbjct: 67  NTKKLEEETEPAAMDRVKAEVRLMIQKARLEKKMSQADLAKQINERTQVVQEYENGKAVP 126

Query: 155 NQQIITKLERALGTKLRGK 172
           NQ ++ K+E+ LG KLRGK
Sbjct: 127 NQAVLAKMEKVLGVKLRGK 145

[Close]
BLAST of Cp4.1LG04g02950 vs. ExPASy Swiss-Prot
Match: Q6GPQ6 (Endothelial differentiation-related factor 1 homolog OS=Xenopus laevis OX=8355 GN=edf1 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.2e-27
Identity = 72/133 (54.14%), Postives = 92/133 (69.17%), Query Frame = 0 

Query: 40  DWEPV-VIRKKAPNAAAKKDEKAVNAARRSGAEIETLKKSNAGTNKAASSGTSLNTRKLD 99
           DW+ V V+RKK P AA  K ++A+ AA+R G E+ET KK +AG NK  +   + NT KLD
Sbjct: 5   DWDTVTVLRKKGPTAAQAKSKQAITAAQRRGEEVETSKKWSAGQNKQHT--ITRNTAKLD 64

Query: 100 DETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKAIPNQQIIT 159
            ETE L H++VP E+ K I Q R  K +TQ  LA  INEKPQ+I +YE GKAIPN Q++ 
Sbjct: 65  RETEELHHDRVPLEVGKVIQQGRQGKGMTQKDLATKINEKPQVIADYECGKAIPNNQVMG 124

Query: 160 KLERALGTKLRGK 172
           K+ER +G KLRGK
Sbjct: 125 KIERVIGLKLRGK 135

[Close]
BLAST of Cp4.1LG04g02950 vs. ExPASy Swiss-Prot
Match: Q6PBY3 (Endothelial differentiation-related factor 1 homolog OS=Danio rerio OX=7955 GN=edf1 PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.6e-27
Identity = 73/132 (55.30%), Postives = 90/132 (68.18%), Query Frame = 0 

Query: 40  DWEPVVIRKKAPNAAAKKDEKAVNAARRSGAEIETLKKSNAGTNKAASSGTSLNTRKLDD 99
           DW+ V + +K  +AA  K ++AV AA+R G  +ET KK  AG NK      + NT KLD 
Sbjct: 5   DWDTVTVLRKKGSAAQSKSKQAVTAAQRKGEAVETSKKWAAGQNK--QHVVTKNTAKLDR 64

Query: 100 ETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKAIPNQQIITK 159
           ETE LSH++VP E+ K I Q R +K LTQ  LA  INEKPQII EYE GKAIPN Q++ K
Sbjct: 65  ETEELSHQRVPLEVGKVIQQGRQNKGLTQKDLATKINEKPQIIAEYECGKAIPNNQVMGK 124

Query: 160 LERALGTKLRGK 172
           +ERA+G KLRGK
Sbjct: 125 IERAIGLKLRGK 134

[Close]
BLAST of Cp4.1LG04g02950 vs. NCBI nr
Match: XP_023532017.1 (multiprotein-bridging factor 1a [Cucurbita pepo subsp. pepo])

HSP 1 Score: 258 bits (659), Expect = 9.95e-86
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0 

Query: 31  MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRSGAEIETLKKSNAGTNKAASSGT 90
           MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRSGAEIETLKKSNAGTNKAASSGT
Sbjct: 1   MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRSGAEIETLKKSNAGTNKAASSGT 60

Query: 91  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 150
           SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA
Sbjct: 61  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 120

Query: 151 IPNQQIITKLERALGTKLRGKK 172
           IPNQQIITKLERALGTKLRGKK
Sbjct: 121 IPNQQIITKLERALGTKLRGKK 142

[Close]
BLAST of Cp4.1LG04g02950 vs. NCBI nr
Match: XP_022930773.1 (multiprotein-bridging factor 1a [Cucurbita moschata] >XP_022989002.1 multiprotein-bridging factor 1a [Cucurbita maxima] >KAG6589237.1 Multiprotein-bridging factor 1a, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022935.1 Multiprotein-bridging factor 1a [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 257 bits (656), Expect = 2.85e-85
Identity = 141/142 (99.30%), Postives = 142/142 (100.00%), Query Frame = 0 

Query: 31  MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRSGAEIETLKKSNAGTNKAASSGT 90
           MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARR+GAEIETLKKSNAGTNKAASSGT
Sbjct: 1   MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGT 60

Query: 91  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 150
           SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA
Sbjct: 61  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 120

Query: 151 IPNQQIITKLERALGTKLRGKK 172
           IPNQQIITKLERALGTKLRGKK
Sbjct: 121 IPNQQIITKLERALGTKLRGKK 142

[Close]
BLAST of Cp4.1LG04g02950 vs. NCBI nr
Match: XP_022148069.1 (multiprotein-bridging factor 1a [Momordica charantia])

HSP 1 Score: 252 bits (643), Expect = 2.73e-83
Identity = 137/142 (96.48%), Postives = 141/142 (99.30%), Query Frame = 0 

Query: 31  MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRSGAEIETLKKSNAGTNKAASSGT 90
           MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRSGAEIETLKKSNAGTNKAASS T
Sbjct: 1   MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRSGAEIETLKKSNAGTNKAASSST 60

Query: 91  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 150
           SLNTRKLDDETENL+H++VPTELKKAIMQARTDKKLTQSQLAQLINEKPQ+IQEYESGKA
Sbjct: 61  SLNTRKLDDETENLTHDRVPTELKKAIMQARTDKKLTQSQLAQLINEKPQVIQEYESGKA 120

Query: 151 IPNQQIITKLERALGTKLRGKK 172
           IPNQQIITKLERALGTKLRGKK
Sbjct: 121 IPNQQIITKLERALGTKLRGKK 142

[Close]
BLAST of Cp4.1LG04g02950 vs. NCBI nr
Match: XP_038888605.1 (multiprotein-bridging factor 1b [Benincasa hispida])

HSP 1 Score: 248 bits (634), Expect = 6.42e-82
Identity = 135/142 (95.07%), Postives = 141/142 (99.30%), Query Frame = 0 

Query: 31  MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRSGAEIETLKKSNAGTNKAASSGT 90
           M+GIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARR+GAEIETLKKSNAGTNKAASS T
Sbjct: 1   MTGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSST 60

Query: 91  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 150
           SLNTRKLDDETENL+H++VPTELKKAIMQART+KKLTQSQLAQLINEKPQIIQEYESGKA
Sbjct: 61  SLNTRKLDDETENLAHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQIIQEYESGKA 120

Query: 151 IPNQQIITKLERALGTKLRGKK 172
           IPNQQIITKLERALGTKLRGKK
Sbjct: 121 IPNQQIITKLERALGTKLRGKK 142

[Close]
BLAST of Cp4.1LG04g02950 vs. NCBI nr
Match: XP_022952433.1 (multiprotein-bridging factor 1b-like [Cucurbita moschata])

HSP 1 Score: 247 bits (630), Expect = 2.61e-81
Identity = 133/142 (93.66%), Postives = 141/142 (99.30%), Query Frame = 0 

Query: 31  MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRSGAEIETLKKSNAGTNKAASSGT 90
           M+GIGPISQDWEP+VIRKKAPNAAAKKDEKAVNAARR+GAEIETL+KSNAGTNKAASS T
Sbjct: 1   MAGIGPISQDWEPIVIRKKAPNAAAKKDEKAVNAARRAGAEIETLRKSNAGTNKAASSST 60

Query: 91  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 150
           SLNTRKLDDETENL+H++VPTELKKAIMQART+KKLTQSQLAQLINEKPQIIQEYESGKA
Sbjct: 61  SLNTRKLDDETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQIIQEYESGKA 120

Query: 151 IPNQQIITKLERALGTKLRGKK 172
           IPNQQIITKLERALGTKLRGKK
Sbjct: 121 IPNQQIITKLERALGTKLRGKK 142

[Close]
BLAST of Cp4.1LG04g02950 vs. ExPASy TrEMBL
Match: A0A6J1JEK2 (multiprotein-bridging factor 1a OS=Cucurbita maxima OX=3661 GN=LOC111486196 PE=4 SV=1)

HSP 1 Score: 257 bits (656), Expect = 1.38e-85
Identity = 141/142 (99.30%), Postives = 142/142 (100.00%), Query Frame = 0 

Query: 31  MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRSGAEIETLKKSNAGTNKAASSGT 90
           MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARR+GAEIETLKKSNAGTNKAASSGT
Sbjct: 1   MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGT 60

Query: 91  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 150
           SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA
Sbjct: 61  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 120

Query: 151 IPNQQIITKLERALGTKLRGKK 172
           IPNQQIITKLERALGTKLRGKK
Sbjct: 121 IPNQQIITKLERALGTKLRGKK 142

[Close]
BLAST of Cp4.1LG04g02950 vs. ExPASy TrEMBL
Match: A0A6J1EWB8 (multiprotein-bridging factor 1a OS=Cucurbita moschata OX=3662 GN=LOC111437149 PE=4 SV=1)

HSP 1 Score: 257 bits (656), Expect = 1.38e-85
Identity = 141/142 (99.30%), Postives = 142/142 (100.00%), Query Frame = 0 

Query: 31  MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRSGAEIETLKKSNAGTNKAASSGT 90
           MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARR+GAEIETLKKSNAGTNKAASSGT
Sbjct: 1   MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGT 60

Query: 91  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 150
           SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA
Sbjct: 61  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 120

Query: 151 IPNQQIITKLERALGTKLRGKK 172
           IPNQQIITKLERALGTKLRGKK
Sbjct: 121 IPNQQIITKLERALGTKLRGKK 142

[Close]
BLAST of Cp4.1LG04g02950 vs. ExPASy TrEMBL
Match: A0A6J1D2X2 (multiprotein-bridging factor 1a OS=Momordica charantia OX=3673 GN=LOC111016839 PE=4 SV=1)

HSP 1 Score: 252 bits (643), Expect = 1.32e-83
Identity = 137/142 (96.48%), Postives = 141/142 (99.30%), Query Frame = 0 

Query: 31  MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRSGAEIETLKKSNAGTNKAASSGT 90
           MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRSGAEIETLKKSNAGTNKAASS T
Sbjct: 1   MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRSGAEIETLKKSNAGTNKAASSST 60

Query: 91  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 150
           SLNTRKLDDETENL+H++VPTELKKAIMQARTDKKLTQSQLAQLINEKPQ+IQEYESGKA
Sbjct: 61  SLNTRKLDDETENLTHDRVPTELKKAIMQARTDKKLTQSQLAQLINEKPQVIQEYESGKA 120

Query: 151 IPNQQIITKLERALGTKLRGKK 172
           IPNQQIITKLERALGTKLRGKK
Sbjct: 121 IPNQQIITKLERALGTKLRGKK 142

[Close]
BLAST of Cp4.1LG04g02950 vs. ExPASy TrEMBL
Match: A0A6J1GKJ7 (multiprotein-bridging factor 1b-like OS=Cucurbita moschata OX=3662 GN=LOC111455121 PE=4 SV=1)

HSP 1 Score: 247 bits (630), Expect = 1.26e-81
Identity = 133/142 (93.66%), Postives = 141/142 (99.30%), Query Frame = 0 

Query: 31  MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRSGAEIETLKKSNAGTNKAASSGT 90
           M+GIGPISQDWEP+VIRKKAPNAAAKKDEKAVNAARR+GAEIETL+KSNAGTNKAASS T
Sbjct: 1   MAGIGPISQDWEPIVIRKKAPNAAAKKDEKAVNAARRAGAEIETLRKSNAGTNKAASSST 60

Query: 91  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 150
           SLNTRKLDDETENL+H++VPTELKKAIMQART+KKLTQSQLAQLINEKPQIIQEYESGKA
Sbjct: 61  SLNTRKLDDETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQIIQEYESGKA 120

Query: 151 IPNQQIITKLERALGTKLRGKK 172
           IPNQQIITKLERALGTKLRGKK
Sbjct: 121 IPNQQIITKLERALGTKLRGKK 142

[Close]
BLAST of Cp4.1LG04g02950 vs. ExPASy TrEMBL
Match: A0A6J1HZG6 (multiprotein-bridging factor 1b-like OS=Cucurbita maxima OX=3661 GN=LOC111468320 PE=4 SV=1)

HSP 1 Score: 245 bits (625), Expect = 7.31e-81
Identity = 133/142 (93.66%), Postives = 140/142 (98.59%), Query Frame = 0 

Query: 31  MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRSGAEIETLKKSNAGTNKAASSGT 90
           M+GIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARR+GAEIET +KSNAGTNKAASS T
Sbjct: 1   MAGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETSRKSNAGTNKAASSST 60

Query: 91  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 150
           SLNTRKLDDETENL+H++VPTELKKAIMQART+KKLTQSQLAQLINEKPQIIQEYESGKA
Sbjct: 61  SLNTRKLDDETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQIIQEYESGKA 120

Query: 151 IPNQQIITKLERALGTKLRGKK 172
           IPNQQIITKLERALGTKLRGKK
Sbjct: 121 IPNQQIITKLERALGTKLRGKK 142

[Close]
BLAST of Cp4.1LG04g02950 vs. TAIR 10
Match: AT2G42680.1 (multiprotein bridging factor 1A )

HSP 1 Score: 233.0 bits (593), Expect = 1.8e-61
Identity = 122/142 (85.92%), Postives = 136/142 (95.77%), Query Frame = 0 

Query: 31  MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRSGAEIETLKKSNAGTNKAASSGT 90
           M+GIGPI+QDWEPVVIRKK  NAAAK+DEK VNAARRSGA+IET++K NAGTNKAASSGT
Sbjct: 1   MAGIGPITQDWEPVVIRKKPANAAAKRDEKTVNAARRSGADIETVRKFNAGTNKAASSGT 60

Query: 91  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 150
           SLNT+ LDD+TENL+HE+VPTELKKAIMQARTDKKLTQSQLAQ+INEKPQ+IQEYESGKA
Sbjct: 61  SLNTKMLDDDTENLTHERVPTELKKAIMQARTDKKLTQSQLAQIINEKPQVIQEYESGKA 120

Query: 151 IPNQQIITKLERALGTKLRGKK 173
           IPNQQI++KLERALG KLRGKK
Sbjct: 121 IPNQQILSKLERALGAKLRGKK 142

[Close]
BLAST of Cp4.1LG04g02950 vs. TAIR 10
Match: AT3G58680.1 (multiprotein bridging factor 1B )

HSP 1 Score: 232.3 bits (591), Expect = 3.0e-61
Identity = 121/142 (85.21%), Postives = 137/142 (96.48%), Query Frame = 0 

Query: 31  MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRSGAEIETLKKSNAGTNKAASSGT 90
           M+GIGPI+QDWEPVVIRK+APNAAAK+DEK VNAARRSGA+IET++K NAG+NKAASSGT
Sbjct: 1   MAGIGPITQDWEPVVIRKRAPNAAAKRDEKTVNAARRSGADIETVRKFNAGSNKAASSGT 60

Query: 91  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 150
           SLNT+KLDD+TENLSH++VPTELKKAIMQAR +KKLTQSQLA LINEKPQ+IQEYESGKA
Sbjct: 61  SLNTKKLDDDTENLSHDRVPTELKKAIMQARGEKKLTQSQLAHLINEKPQVIQEYESGKA 120

Query: 151 IPNQQIITKLERALGTKLRGKK 173
           IPNQQI++KLERALG KLRGKK
Sbjct: 121 IPNQQILSKLERALGAKLRGKK 142

[Close]
BLAST of Cp4.1LG04g02950 vs. TAIR 10
Match: AT3G24500.1 (multiprotein bridging factor 1C )

HSP 1 Score: 127.1 bits (318), Expect = 1.4e-29
Identity = 66/139 (47.48%), Postives = 101/139 (72.66%), Query Frame = 0 

Query: 35  GPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRSGAEIETLKKSNAGTNKAASSGT--SL 94
           G ++QDWEPVV+ K    +   +D KAVNAA R+G  ++T+KK +AG+NK   S     +
Sbjct: 7   GAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKSTAVPVI 66

Query: 95  NTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKAIP 154
           NT+KL++ETE  + ++V  E++  I +AR +KK++Q+ LA+ INE+ Q++QEYE+GKA+P
Sbjct: 67  NTKKLEEETEPAAMDRVKAEVRLMIQKARLEKKMSQADLAKQINERTQVVQEYENGKAVP 126

Query: 155 NQQIITKLERALGTKLRGK 172
           NQ ++ K+E+ LG KLRGK
Sbjct: 127 NQAVLAKMEKVLGVKLRGK 145

[Close]
BLAST of Cp4.1LG04g02950 vs. TAIR 10
Match: AT3G24500.2 (multiprotein bridging factor 1C )

HSP 1 Score: 62.0 bits (149), Expect = 5.4e-10
Identity = 36/89 (40.45%), Postives = 58/89 (65.17%), Query Frame = 0 

Query: 35  GPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRSGAEIETLKKSNAGTNKAASSGT--SL 94
           G ++QDWEPVV+ K    +   +D KAVNAA R+G  ++T+KK +AG+NK   S     +
Sbjct: 7   GAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKSTAVPVI 66

Query: 95  NTRKLDDETENLSHEKVPTELKKAIMQAR 122
           NT+KL++ETE  + ++V  E++  + + R
Sbjct: 67  NTKKLEEETEPAAMDRVKAEVRLCLRRWR 95

The following BLAST results are available for this feature:
BLAST of Cp4.1LG04g02950 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SJI82.5e-6085.92Multiprotein-bridging factor 1a OS=Arabidopsis thaliana OX=3702 GN=MBF1A PE=2 SV... [more]
Q9LXT34.2e-6085.21Multiprotein-bridging factor 1b OS=Arabidopsis thaliana OX=3702 GN=MBF1B PE=1 SV... [more]
Q9LV581.9e-2847.48Multiprotein-bridging factor 1c OS=Arabidopsis thaliana OX=3702 GN=MBF1C PE=1 SV... [more]
Q6GPQ61.2e-2754.14Endothelial differentiation-related factor 1 homolog OS=Xenopus laevis OX=8355 G... [more]
Q6PBY31.6e-2755.30Endothelial differentiation-related factor 1 homolog OS=Danio rerio OX=7955 GN=e... [more]
BLAST of Cp4.1LG04g02950 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023532017.19.95e-86100.00multiprotein-bridging factor 1a [Cucurbita pepo subsp. pepo][more]
XP_022930773.12.85e-8599.30multiprotein-bridging factor 1a [Cucurbita moschata] >XP_022989002.1 multiprotei... [more]
XP_022148069.12.73e-8396.48multiprotein-bridging factor 1a [Momordica charantia][more]
XP_038888605.16.42e-8295.07multiprotein-bridging factor 1b [Benincasa hispida][more]
XP_022952433.12.61e-8193.66multiprotein-bridging factor 1b-like [Cucurbita moschata][more]
BLAST of Cp4.1LG04g02950 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JEK21.38e-8599.30multiprotein-bridging factor 1a OS=Cucurbita maxima OX=3661 GN=LOC111486196 PE=4... [more]
A0A6J1EWB81.38e-8599.30multiprotein-bridging factor 1a OS=Cucurbita moschata OX=3662 GN=LOC111437149 PE... [more]
A0A6J1D2X21.32e-8396.48multiprotein-bridging factor 1a OS=Momordica charantia OX=3673 GN=LOC111016839 P... [more]
A0A6J1GKJ71.26e-8193.66multiprotein-bridging factor 1b-like OS=Cucurbita moschata OX=3662 GN=LOC1114551... [more]
A0A6J1HZG67.31e-8193.66multiprotein-bridging factor 1b-like OS=Cucurbita maxima OX=3661 GN=LOC111468320... [more]
BLAST of Cp4.1LG04g02950 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G42680.11.8e-6185.92multiprotein bridging factor 1A [more]
AT3G58680.13.0e-6185.21multiprotein bridging factor 1B [more]
AT3G24500.11.4e-2947.48multiprotein bridging factor 1C [more]
AT3G24500.25.4e-1040.45multiprotein bridging factor 1C [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 117..137
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..109
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..94
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..109
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..73
NoneNo IPR availablePANTHERPTHR10245:SF118MULTIPROTEIN BRIDGING FACTOR 1Bcoord: 31..172
NoneNo IPR availablePANTHERPTHR10245ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1coord: 31..172
IPR001387Cro/C1-type helix-turn-helix domainSMARTSM00530mbf_short4coord: 116..171
e-value: 4.3E-10
score: 49.5
IPR001387Cro/C1-type helix-turn-helix domainPFAMPF01381HTH_3coord: 117..168
e-value: 2.7E-12
score: 46.6
IPR001387Cro/C1-type helix-turn-helix domainPROSITEPS50943HTH_CROC1coord: 117..171
score: 12.233327
IPR001387Cro/C1-type helix-turn-helix domainCDDcd00093HTH_XREcoord: 115..168
e-value: 3.08172E-9
score: 48.7034
IPR010982Lambda repressor-like, DNA-binding domain superfamilyGENE3D1.10.260.40coord: 101..172
e-value: 3.4E-28
score: 99.0
IPR010982Lambda repressor-like, DNA-binding domain superfamilySUPERFAMILY47413lambda repressor-like DNA-binding domainscoord: 111..168
IPR013729Multiprotein bridging factor 1, N-terminalPFAMPF08523MBF1coord: 39..109
e-value: 2.2E-23
score: 82.5

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g02950.1Cp4.1LG04g02950.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding